mRNA_11988 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|336417
Unique NamemRNA_11988
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A835YKI5_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI5_9STRA)

HSP 1 Score: 766 bits (1977), Expect = 5.620e-278
Identity = 399/400 (99.75%), Postives = 399/400 (99.75%), Query Frame = 1
Query:    1 MEEDVGEDPEMPFGGDGPFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQIAAEASGSGGXGSSPK 1200
            MEEDVGEDPEMPFGGDGPFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQIAAEASGSGG GSSPK
Sbjct:    1 MEEDVGEDPEMPFGGDGPFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQIAAEASGSGGGGSSPK 400          
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S2YT17_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YT17_9STRA)

HSP 1 Score: 414 bits (1064), Expect = 1.180e-137
Identity = 223/378 (58.99%), Postives = 271/378 (71.69%), Query Frame = 1
Query:   55 FTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLAR--AGLGAEEGLAPPA-------------FPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPL 1143
            FTVLGIE+SCDDTGAAVVRSDG ILGEALASQQ+IHE+WGGVVPGLAR+AH  +ID +V+ AL  AGM+SAA+VDA+ VTVGPGLEICLRVG  KA  LA E+ KPFV +HHLEAH+++AR  + +  EE L                 FPF ALLVSGGHCQ++ C GVG ++ILGGT DD+LGEAFDK ARLLGLP GGGGGPAVE  AR G+  A  LPIP+ +++D +FSYAGLK + R   ER   E  +     LPD   AD+AASFQH AI H+EQR++  +    A G+RTLAVVGGVAAN ++R RL  +C++  E       AW M VPP +LCTD G M AW+A+ER+  G S+ A+ QEV+AR P 
Sbjct:  126 FTVLGIESSCDDTGAAVVRSDGVILGEALASQQEIHEQWGGVVPGLARDAHQEQIDSVVSQALTNAGMSSAAEVDAIGVTVGPGLEICLRVGSTKAIQLASEYQKPFVGIHHLEAHILMARLPSSISNEEELIHITATEDTHASTRAIEFPFFALLVSGGHCQMMRCSGVGNYTILGGTTDDSLGEAFDKTARLLGLPVGGGGGPAVESLAREGNRTAIDLPIPLRYRRDYDFSYAGLKTAVRKAAERLATEHNVETSDKLPDSVKADIAASFQHRAIQHIEQRLKYGMEAMEAEGIRTLAVVGGVAANTELRTRLERMCSSREE-------AWTMFVPPPKLCTDQGAMSAWAAIERIMMGSSDEASTQEVFARYPF 496          
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: W7TQK2_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQK2_9STRA)

HSP 1 Score: 411 bits (1056), Expect = 8.930e-136
Identity = 238/403 (59.06%), Postives = 275/403 (68.24%), Query Frame = 1
Query:   55 FTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLAR--------------AGLGAEEGLAPPA-FPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALC-----AAAGERDGE-----------GGGA---------WRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPL 1143
            FTVLGIETSCDDTG AVVRSDG ILGEALASQ  IHE+WGGVVPGLAR+AH + ID +V  AL +AGMAS A+V AV VTVGPGLEICLRVG E AKALA    KPFVAVHHLEAH ++AR              AG  A   + P   FPFLALLVSGGHC LL C GVGR+  LGGT+DDALGEA+DK ARLL + TG  GGPA+ER AR G+P+A  LP+PM  KK++NFSYAGLKN+FRM V R +  L L  +        ADLAASFQH AI HLE+R+  A+     RGV TLAVVGGVA+N  +RARL  LC     A   E++ E           GGG          W +VVPP RLCTDNGVMVAW+A+E+LR G S+   G++V+AR P 
Sbjct:  148 FTVLGIETSCDDTGVAVVRSDGVILGEALASQYKIHEQWGGVVPGLARDAHASVIDSMVEEALKKAGMASVAEVGAVGVTVGPGLEICLRVGTETAKALATTFHKPFVAVHHLEAHCLMARFGQPLDSREPKEEAAGTSASSPIPPQTRFPFLALLVSGGHCMLLECWGVGRYRTLGGTLDDALGEAYDKAARLLKIGTGAAGGPAMERLAREGNPKAVVLPVPMRGKKNLNFSYAGLKNAFRMAVTRLKEALNLGEEEDFDPKTKADLAASFQHVAIQHLEERLTLAMKESERRGVHTLAVVGGVASNQAIRARLQVLCEKRSLARRLEKEQERIWDEANSENKGGGTMEVEAPLPPWELVVPPPRLCTDNGVMVAWAAIEKLRLGYSDVVEGRDVHARWPF 550          
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S4J610_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J610_9STRA)

HSP 1 Score: 409 bits (1052), Expect = 1.310e-135
Identity = 224/379 (59.10%), Postives = 272/379 (71.77%), Query Frame = 1
Query:   52 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGL-APPA------------FPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHAR--GVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPL 1143
            PFTVLGIE+SCDDTGAAVVRSDG ILGEALASQ +IHE+WGG+VPGLAR AH  +ID I+  AL  AGM+S   VDA+ VTVGPGLEICLRVGC KA+ LA ++ KPFV +HHLEAH+++AR   G  + L   PA            FPFLALLVSGGHCQLL C  +G++SILGGT+DD+LGEAFDK ARLLGLP GGGGGPAVE  AR GDP+A  LPIP+  +KD +FSYAGLK + R+  E+   E  L +   L     A++AASFQ+ AI H+EQR+ RA++       G+R+LAVVGGVAAN+++R+RL ++C    E        W M VPP RLCTD G M AW+A+ER+  G S+ A GQEVYAR P 
Sbjct:  150 PFTVLGIESSCDDTGAAVVRSDGVILGEALASQHEIHEEWGGIVPGLARTAHEEKIDGIIHEALQNAGMSSVEDVDAIGVTVGPGLEICLRVGCNKARDLAEKYGKPFVGIHHLEAHILMARLPYGDSDDLFISPATEDMHEAARAIEFPFLALLVSGGHCQLLKCLDIGKYSILGGTMDDSLGEAFDKTARLLGLPVGGGGGPAVEALARDGDPKAVKLPIPLQRRKDCDFSYAGLKTAVRIAAEKLVKERELESIDELSRDDKANIAASFQNVAIRHIEQRLERAMSMMETEEDGIRSLAVVGGVAANSELRSRLESICTNRSEP-------WNMFVPPPRLCTDQGSMSAWAAIERIVVGSSDKAEGQEVYARYPF 521          
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A1Z5K725_FISSO (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K725_FISSO)

HSP 1 Score: 400 bits (1027), Expect = 1.240e-132
Identity = 217/368 (58.97%), Postives = 262/368 (71.20%), Query Frame = 1
Query:   55 FTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHAR-GVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQI 1155
            FTVLGIE+SCDDTGAAVVRSDGTILGEALASQ  IH  WGGVVPGLA+EAH  EIDRIV  AL  AGM SAA VDA+ VTVGPGLEICLRVG  KA+ALA+E+ KPFV VHHLEAH+++AR  L  +       FPFLALLVSGGHCQLL C G+G  ++LGGT DD+LGEA+DK ARLLGLP GGGGGP VER AR GDP   PL +P+  +KD++FSY+GLK++ R   ER   E  +   A L     A++AASFQH AI H+EQR+RRA+     +  +R+LA+VGGVAAN  +R R+  LC            +W + +PP RLCTD G M AW+AVER+R   ++     +VYAR P   ++
Sbjct:  112 FTVLGIESSCDDTGAAVVRSDGTILGEALASQSHIHAPWGGVVPGLAKEAHEAEIDRIVQEALEAAGMTSAADVDAIGVTVGPGLEICLRVGATKARALAIEYQKPFVGVHHLEAHILMAR--LPYDSASKQLEFPFLALLVSGGHCQLLKCTGIGDMAVLGGTFDDSLGEAYDKTARLLGLPVGGGGGPVVERLAREGDPTTIPLSVPLQSRKDLDFSYSGLKSNVRRVAERLAKEQGVETPADLSHSIKANIAASFQHVAIQHVEQRLRRAMILLEEKENIRSLALVGGVAANQVLRTRIEGLCRKR---------SWDLWIPPPRLCTDQGTMSAWAAVERMRVQSTDDPTIPDVYARYPFAQKL 468          
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S1Z3R7_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3R7_9STRA)

HSP 1 Score: 397 bits (1021), Expect = 2.620e-131
Identity = 216/384 (56.25%), Postives = 270/384 (70.31%), Query Frame = 1
Query:   52 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLG-------------AEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCH-------ARGVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPL 1143
            PF VLGIE+SCDDTGAAVVRSDG ILGE+LASQ DIHE+WGGVVPGLA+ AH  +ID ++  AL  A + + ++VDA+ VTVGPGLEICLRVGCE+AK LAL + KPFV VHHLEAH+++AR   G               E +   +FPFLALLVSGGHCQL+ C G+GR+SI+GGT+DD+LGEAFDK ARLLGLP GGGGGPAVE  A+ GDP++  LPIP+  +KD +FSYAGLK + RM  ++ R E  L +   L     A++AASFQ+ AI H+EQR+ RA+              +++LAVVGGVAAN ++R+RL  +C        +   +W M VPP RLCTD G M AW+A+ER+  G S+ A GQEVYAR P 
Sbjct:  121 PFVVLGIESSCDDTGAAVVRSDGVILGESLASQHDIHEEWGGVVPGLAKTAHEEKIDLVIEEALQNANL-TMSEVDAIGVTVGPGLEICLRVGCERAKDLALRYKKPFVGVHHLEAHILMARLPFGNLERVEVQPATEEVHEAVHAMSFPFLALLVSGGHCQLMKCLGIGRYSIIGGTIDDSLGEAFDKTARLLGLPVGGGGGPAVEALAKEGDPKSIQLPIPLQRRKDCDFSYAGLKTAVRMAADKLRLERGLESIDDLCRQDKANIAASFQNVAIRHIEQRLNRAMDMIENEQEEEGGEKIQSLAVVGGVAANLELRSRLEKVC-------DDRSTSWNMFVPPPRLCTDQGSMSAWAAIERIMVGSSDQADGQEVYARFPF 496          
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S2RZ45_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZ45_9STRA)

HSP 1 Score: 392 bits (1007), Expect = 5.370e-130
Identity = 212/380 (55.79%), Postives = 271/380 (71.32%), Query Frame = 1
Query:   52 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARA------------GLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARG-VRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQ 1152
            PFTVLGIE+SCDDTGAAVVRSDG ILGE+LASQ  IHE+WGGVVPGLA+ AH  +ID ++  A+  AG++S  ++DA+ VTVGPGLEICLRVGC KA+ LA++  KPFVA+HHLEAH+++AR              + + E      FPFLALLVSGGHCQ+L C GVGR+SI+GGT+DD+LGEA+DK ARLLGLP GGGGGPA+E  A+ GDP+A  LPIP+  +KD +FSYAGLK + R T E+   E  +++   L     A++AASFQ+ AITH+EQR++RA+        ++TLAVVGGVAAN ++R+RL  LC            +W+M VPP RLCTD G M AW+A+ERL    S++   Q+V+AR P   Q
Sbjct:   70 PFTVLGIESSCDDTGAAVVRSDGVILGESLASQHKIHEEWGGVVPGLAKLAHEEKIDVVIEEAIQNAGLSSIDEIDAIGVTVGPGLEICLRVGCNKARELAIQFQKPFVAIHHLEAHILMARLPPQKKEQQSTSIDIVSHESNCAIQFPFLALLVSGGHCQMLKCLGVGRYSIIGGTIDDSLGEAYDKTARLLGLPIGGGGGPAIEALAKEGDPKAVKLPIPLQKRKDFDFSYAGLKTAVRTTAEKLCIERNVTSIVELSHQDRANIAASFQNVAITHIEQRLKRAMDLLENDDQIKTLAVVGGVAANQELRSRLETLCTDQ---------SWQMFVPPPRLCTDQGSMSAWAAIERLMVCSSDSPENQKVHARFPFQQQ 440          
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S2V5H1_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5H1_9STRA)

HSP 1 Score: 395 bits (1014), Expect = 5.970e-130
Identity = 217/395 (54.94%), Postives = 266/395 (67.34%), Query Frame = 1
Query:   52 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPA--------------FPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGVRTLAVVGGVAANAQVRARLGALCAAAG---ERDGEGGG---------AWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQIA 1158
            PFTVLGIETSCDDTG AVVRSDG ILGEA+  Q DIH +WGGVVP LA +AH + I   V  AL +AG+ S A VDA+ VTVGPGLE+CLRVG   AKALALEH  PFV VHHLEAH ++AR        L PP               +PFLALLVSGGHCQLLL EG GR+S++GGT+DDALGEA+DK ARLLG+  G GGGP +E  AR GDP + P+ +PM+ +K  +FS+AGLKN+FRM      AE  +   + L +   ADLAASFQH AI HLE R++RA+  C  R +  LA+VGGVAAN ++R R+ ALC       +R               +W++ VPP RLCTDNGVMVAW+A+ERL+ GVS++    +V+ R PLG  +A
Sbjct:  114 PFTVLGIETSCDDTGVAVVRSDGAILGEAVVGQADIHAEWGGVVPNLAMDAHKSAIQSTVQLALERAGLKSPADVDAIGVTVGPGLEVCLRVGAGAAKALALEHRLPFVGVHHLEAHCLMARI---PSSPLVPPTPYQDQKELVEDELVYPFLALLVSGGHCQLLLVEGAGRYSVVGGTLDDALGEAYDKAARLLGISVGIGGGPVLEALARGGDPESVPMTVPMLQRKGCDFSFAGLKNAFRMAANNKAAEFNVEDASLLEEPVKADLAASFQHTAIKHLEHRLKRAMQICEDRNIYNLAIVGGVAANQEIRERIQALCEKRSLILKRKASRSADPPPDFHCESWKLFVPPPRLCTDNGVMVAWAAIERLKLGVSDSPLENDVFPRWPLGKALA 505          
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: K0T4A1_THAOC (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T4A1_THAOC)

HSP 1 Score: 392 bits (1006), Expect = 4.640e-129
Identity = 213/370 (57.57%), Postives = 264/370 (71.35%), Query Frame = 1
Query:   52 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPA-----FPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHAR-GVRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEVYARVPL 1143
            PF VLGIE+SCDDTGAA++RSDG ILGE+LASQ  IHE+WGGVVPGLA+ AH   IDR+V  +L +AGM     VDA+ VTVGPGLEICLRVGCEKAK LA+++ KPFV VHHLEAH+++AR      +   P       FPFLALLVSGGHCQ+L C G+G ++ILGGT+DD+LGEAFDK ARLLGLP GGGGGPAVE  AR G+P++  LP+P+  ++DM+FSYAGLK + R+  E+   E  + +   L     A++AASFQ+ +  H+E R+ RA+       G+ TLAVVGGVAAN ++R+RL  LC    +RD      W M VPP RLCTD G M AW++VERL  G S+ A G EVYAR P 
Sbjct:  128 PFCVLGIESSCDDTGAAIIRSDGVILGESLASQHSIHEEWGGVVPGLAKTAHEQNIDRVVNESLQRAGM-QIQDVDAIGVTVGPGLEICLRVGCEKAKELAIQNKKPFVGVHHLEAHILMARLPKDHNQTDQPAEDRSMEFPFLALLVSGGHCQILKCIGIGSYTILGGTLDDSLGEAFDKTARLLGLPVGGGGGPAVEALARDGNPKSVKLPVPLQKRRDMDFSYAGLKTAVRLAAEKICVERGVESPDRLSHQDKANIAASFQNVSFKHVEVRLGRAMDKVQREDGISTLAVVGGVAANKELRSRLEVLCT---DRDHR----WEMHVPPPRLCTDQGAMSAWASVERLAVGSSDVAEGHEVYARYPF 489          
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Match: A0A7S2IUQ1_9EUKA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2IUQ1_9EUKA)

HSP 1 Score: 386 bits (992), Expect = 8.660e-129
Identity = 216/348 (62.07%), Postives = 258/348 (74.14%), Query Frame = 1
Query:  118 GTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAPPAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHA-----------RG-VRTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDNGVMVAWSAVERLRCGVSNAAAGQEV 1125
            GTILGEALASQ  +HE WGGVVPGLAR+AHV  +DR+V+ AL +A M+SA +VDAVAVTVGPGLEICLRVGCE AK LAL H KPFV +HHLEAHV++AR   G     A   FPFL LL SGGHCQLLLC GVG+ +++G T+DDALGEAFDKVARLLGLP GGGGGPA+E  AR GDP A  LP+PM +KK+ +FS+AGLK + R+ VERA  ++  S+         AD+AASFQHAA +HLEQR+R A+A+C A           +G VRTL V GGVAAN ++R RL ALC +     G G   W++VVPP RLCTDNGVMVAW+AVE++R G S+ A GQEV
Sbjct:    1 GTILGEALASQAALHEDWGGVVPGLARDAHVEALDRVVSEALRRANMSSADEVDAVAVTVGPGLEICLRVGCEGAKELALRHDKPFVGIHHLEAHVLMARLAAGP----ASVPFPFLTLLTSGGHCQLLLCTGVGKHAVIGSTLDDALGEAFDKVARLLGLPIGGGGGPALEALARTGDPNAIKLPVPMRNKKNFDFSFAGLKTAVRLAVERAPEDVRSSSSFH------ADVAASFQHAAFSHLEQRLRYAMAYCAAPQGAGEQGAEVQGTVRTLVVSGGVAANQELRTRLQALCDSTAAPGGSGE-PWQLVVPPPRLCTDNGVMVAWAAVEQMRSGQSHEAEGQEV 337          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|336417 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKI5_9STRA5.620e-27899.75Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S2YT17_9STRA1.180e-13758.99Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
W7TQK2_9STRA8.930e-13659.06Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S4J610_9STRA1.310e-13559.10Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A1Z5K725_FISSO1.240e-13258.97Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S1Z3R7_9STRA2.620e-13156.25Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S2RZ45_9STRA5.370e-13055.79Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S2V5H1_9STRA5.970e-13054.94Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
K0T4A1_THAOC4.640e-12957.57Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S2IUQ1_9EUKA8.660e-12962.07Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_83contigContig_83:484718..487219 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|336417|MIX45180_160_70
BRITEko00000,ko01000,ko03016
KEGG rclassRC00070,RC00416
KEGG ReactionR10648
KEGG koko:K01409
EC2.3.1.234
DescriptionGlycoprotease family
COG categoryO
Max annot lvl2836|Bacillariophyta
EggNOG OGsCOG0533@1|root,KOG2707@2759|Eukaryota,2XB61@2836|Bacillariophyta
Evalue2.12e-139
Seed ortholog2850.Phatr9987
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionKae1/YgjD family
Ec32 orthologEc-20_001490.1
TranscriptId336739
TrackFilteredModels1
ProteinId336417
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|336417gene_11988Tribonema minus UTEX_B_3156 geneContig_83 484718..487219 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11988_1exon_11988_1Tribonema minus UTEX_B_3156 exonContig_83 484718..484768 +
exon_11988_2exon_11988_2Tribonema minus UTEX_B_3156 exonContig_83 485887..487219 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11988CDS_11988Tribonema minus UTEX_B_3156 CDSContig_83 484718..484768 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_11988UTR3_11988Tribonema minus UTEX_B_3156 three_prime_UTRContig_83 487039..487219 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|336417Trimin1|336417|MIX45180_160_70Tribonema minus UTEX_B_3156 polypeptideContig_83 484718..487038 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11988 ID=mRNA_11988|Name=jgi.p|Trimin1|336417|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1384bp|location=Sequence derived from alignment at Contig_83:484718..487219+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGGAGGACGTAGGGGAGGATCCCGAGATGCCATTTGGCGGCGACGG
CCCCTTCACAGTGCTGGGCATTGAGACGAGCTGCGATGACACCGGCGCCG
CGGTGGTGAGGAGCGATGGCACCATACTGGGAGAGGCGCTGGCCTCGCAG
CAGGATATCCACGAGAAGTGGGGAGGCGTGGTGCCGGGGCTGGCCCGGGA
GGCTCACGTCAACGAGATCGATCGCATCGTTGCAGCAGCCCTAGCCCAGG
CGGGCATGGCCTCCGCAGCGCAGGTGGACGCGGTCGCCGTCACCGTGGGC
CCGGGGCTGGAGATCTGTCTACGCGTGGGCTGCGAGAAGGCCAAGGCGCT
CGCGCTCGAGCACGCCAAGCCCTTCGTCGCAGTGCACCACTTGGAGGCGC
ACGTCATGCTCGCGCGCGCGGGCCTCGGCGCCGAGGAGGGCCTCGCGCCA
CCGGCCTTCCCATTCCTGGCCCTCCTGGTCTCCGGCGGCCACTGCCAGCT
GCTGCTGTGCGAGGGCGTCGGCCGCTTCAGCATTCTCGGCGGCACCGTCG
ATGACGCGTTGGGCGAGGCTTTCGACAAGGTGGCGCGTCTGCTGGGACTG
CCGACGGGCGGCGGCGGCGGCCCCGCGGTCGAGCGCTGCGCGCGCGCCGG
CGACCCGCGCGCGTACCCCCTCCCCATCCCCATGGTCCACAAGAAGGACA
TGAACTTCAGCTACGCGGGGCTCAAGAACTCATTCCGCATGACGGTCGAG
CGCGCGCGCGCAGAGCTCGCGCTGAGCGCCGATGCGCCGCTGCCCGATGG
CGCCGTCGCGGACCTTGCCGCGTCGTTCCAGCACGCCGCCATCACGCACC
TCGAGCAGCGCGTGCGCCGCGCCGTGGCGCACTGCCACGCGCGCGGCGTG
CGCACGCTCGCCGTCGTGGGCGGCGTCGCGGCGAACGCGCAGGTGCGCGC
GCGGCTCGGCGCGCTGTGCGCAGCAGCGGGGGAGAGGGACGGGGAGGGGG
GGGGCGCGTGGCGCATGGTCGTGCCGCCGGCACGGCTGTGCACGGACAAC
GGCGTCATGGTGGCGTGGAGCGCGGTGGAGCGGCTGCGGTGCGGCGTGTC
GAACGCGGCGGCGGGGCAGGAGGTGTACGCGCGCGTGCCGCTGGGGCCGC
AGATTGCCGCGGAGGCGAGTGGTAGCGGTGGTGGCGGTAGCAGCCCGAAA
TGAGAGAGTAGTGGTGGTGGCAGCGCGGACGCGGCGGTGACGGCACTGGC
ACCGATAGGTGAAGTAGTAGCGAATAATTTTTGTTCTGAGTTTACGAACA
GCAGCGATGCGGTGGCTGCGGCGGCCACACTGTGGCGGCATGTGTTCTGT
ACATACACCCACCTGAATGACATCACAGTAAAAG
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protein sequence of jgi.p|Trimin1|336417

>Trimin1|336417|MIX45180_160_70 ID=Trimin1|336417|MIX45180_160_70|Name=jgi.p|Trimin1|336417|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=401bp
MEEDVGEDPEMPFGGDGPFTVLGIETSCDDTGAAVVRSDGTILGEALASQ
QDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVG
PGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLARAGLGAEEGLAP
PAFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGL
PTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVE
RARAELALSADAPLPDGAVADLAASFQHAAITHLEQRVRRAVAHCHARGV
RTLAVVGGVAANAQVRARLGALCAAAGERDGEGGGAWRMVVPPARLCTDN
GVMVAWSAVERLRCGVSNAAAGQEVYARVPLGPQIAAEASGSGGGGSSPK
*
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mRNA from alignment at Contig_83:484718..487219+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11988 ID=mRNA_11988|Name=jgi.p|Trimin1|336417|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2502bp|location=Sequence derived from alignment at Contig_83:484718..487219+ (Tribonema minus UTEX_B_3156 )
ATGGAGGAGGACGTAGGGGAGGATCCCGAGATGCCATTTGGCGGCGACGG CGTTTGAGTGGTTGTCTCAAAGACACTTTCAGACTGTCACACGACATGTA GATTCCGTACAGCAAGCTTCAAGTTAGATGCCATTCATCTGGGCTTTTTC GCGCCCTGAGCGAGAAGTAATAAAAAGTACGCCATTTCAATTCACCAGGC AGGCCAGGCAGCAGCCCAGCGTATCTTACCCTGTGTATAGTTCGCTGCTC AGTGCTCGAAGCTCCGGCTCTGTAAGGTAGTACTCTCGTCCCGCGTCAAG CAGCTGCTCCCATCTGTGGACAGCAGCGATTACATGGGAACCGTGAGTGA ACCGTGTGGTAAGAAGCAGTTGGTTGGTGGTGCGAACGATCTGTGCAAGC GCGATAAAAGCATCAGACATGTGGCGATCTCAAGTTGGAATTTACAAACG TTTGCTATCGCACGTAAGCATAGGCTCATACATATTGTCACTGCGCTGCT ACAGAGTGGCACCAATCTCTCCCGCACAAATCGCAGCAGTTATTACGAAT GCATCAGATGAAGAGCTTTGCCACCTTATTCAGTGCTACGATAGCTCATC AAATTATGCACAGGGCGGTTTTTAAATTTGGCAACAGCTGACAAAGAAAG CGCGTAGCATTCCCTGTGGTTTCTGCTGCTCACAAAAATATATTAATTTC ATTTCTTGCATGGAGCTTGTGGTGTAATGGCCTTGATGTGTGTGGACCAC CAAAATTCGGCTGCCCAAAGATGTTTCCAAGCCCCACCTGCAACTTCAAG TCATTAACTTCACTTACAACTTGACGTTAGGAAACTTCAAAACGAAAGTG AAAGGTGGCACTTTGGCAGTGCGCCATGGGGCGCCTGCCGTTGGTCATGC TGGCATTGCAAGTCAGCGCGCGCAGCTGTAGAGGCTTTTTGATGCCGGCA GCTAGCAGAAGCCTGCTGTCCATGTGCAGTACTGCAGCAGCGAACAGCAG CACACCTCCCCCAGCTGTGCGAGGTACCAAGAAGAAGCGGGGCACTGGCC CGCGGGCGAACATAGGACTGGCCAAGGCAGTAGACAGAGGGTCAGCAGCC AGCGAAGCAAAGGCTCTACTATTTCCTGAAACCCCAGCTGCCTTGTCAGG CCTGCCTGATCTCACCAAGCCCTTCACAGTGCTGGGCATTGAGACGAGCT GCGATGACACCGGCGCCGCGGTGGTGAGGAGCGATGGCACCATACTGGGA GAGGCGCTGGCCTCGCAGCAGGATATCCACGAGAAGTGGGGAGGCGTGGT GCCGGGGCTGGCCCGGGAGGCTCACGTCAACGAGATCGATCGCATCGTTG CAGCAGCCCTAGCCCAGGCGGGCATGGCCTCCGCAGCGCAGGTGGACGCG GTCGCCGTCACCGTGGGCCCGGGGCTGGAGATCTGTCTACGCGTGGGCTG CGAGAAGGCCAAGGCGCTCGCGCTCGAGCACGCCAAGCCCTTCGTCGCAG TGCACCACTTGGAGGCGCACGTCATGCTCGCGCGCGCGGGCCTCGGCGCC GAGGAGGGCCTCGCGCCACCGGCCTTCCCATTCCTGGCCCTCCTGGTCTC CGGCGGCCACTGCCAGCTGCTGCTGTGCGAGGGCGTCGGCCGCTTCAGCA TTCTCGGCGGCACCGTCGATGACGCGTTGGGCGAGGCTTTCGACAAGGTG GCGCGTCTGCTGGGACTGCCGACGGGCGGCGGCGGCGGCCCCGCGGTCGA GCGCTGCGCGCGCGCCGGCGACCCGCGCGCGTACCCCCTCCCCATCCCCA TGGTCCACAAGAAGGACATGAACTTCAGCTACGCGGGGCTCAAGAACTCA TTCCGCATGACGGTCGAGCGCGCGCGCGCAGAGCTCGCGCTGAGCGCCGA TGCGCCGCTGCCCGATGGCGCCGTCGCGGACCTTGCCGCGTCGTTCCAGC ACGCCGCCATCACGCACCTCGAGCAGCGCGTGCGCCGCGCCGTGGCGCAC TGCCACGCGCGCGGCGTGCGCACGCTCGCCGTCGTGGGCGGCGTCGCGGC GAACGCGCAGGTGCGCGCGCGGCTCGGCGCGCTGTGCGCAGCAGCGGGGG AGAGGGACGGGGAGGGGGGGGGCGCGTGGCGCATGGTCGTGCCGCCGGCA CGGCTGTGCACGGACAACGGCGTCATGGTGGCGTGGAGCGCGGTGGAGCG GCTGCGGTGCGGCGTGTCGAACGCGGCGGCGGGGCAGGAGGTGTACGCGC GCGTGCCGCTGGGGCCGCAGATTGCCGCGGAGGCGAGTGGTAGCGGTGGT GGCGGTAGCAGCCCGAAATGAGAGAGTAGTGGTGGTGGCAGCGCGGACGC GGCGGTGACGGCACTGGCACCGATAGGTGAAGTAGTAGCGAATAATTTTT GTTCTGAGTTTACGAACAGCAGCGATGCGGTGGCTGCGGCGGCCACACTG TGGCGGCATGTGTTCTGTACATACACCCACCTGAATGACATCACAGTAAA AG
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Coding sequence (CDS) from alignment at Contig_83:484718..487219+

>mRNA_11988 ID=mRNA_11988|Name=jgi.p|Trimin1|336417|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1203bp|location=Sequence derived from alignment at Contig_83:484718..487219+ (Tribonema minus UTEX_B_3156 )
ATGGAGGAGGACGTAGGGGAGGATCCCGAGATGCCATTTGGCGGCGACGG
CCCCTTCACAGTGCTGGGCATTGAGACGAGCTGCGATGACACCGGCGCCG
CGGTGGTGAGGAGCGATGGCACCATACTGGGAGAGGCGCTGGCCTCGCAG
CAGGATATCCACGAGAAGTGGGGAGGCGTGGTGCCGGGGCTGGCCCGGGA
GGCTCACGTCAACGAGATCGATCGCATCGTTGCAGCAGCCCTAGCCCAGG
CGGGCATGGCCTCCGCAGCGCAGGTGGACGCGGTCGCCGTCACCGTGGGC
CCGGGGCTGGAGATCTGTCTACGCGTGGGCTGCGAGAAGGCCAAGGCGCT
CGCGCTCGAGCACGCCAAGCCCTTCGTCGCAGTGCACCACTTGGAGGCGC
ACGTCATGCTCGCGCGCGCGGGCCTCGGCGCCGAGGAGGGCCTCGCGCCA
CCGGCCTTCCCATTCCTGGCCCTCCTGGTCTCCGGCGGCCACTGCCAGCT
GCTGCTGTGCGAGGGCGTCGGCCGCTTCAGCATTCTCGGCGGCACCGTCG
ATGACGCGTTGGGCGAGGCTTTCGACAAGGTGGCGCGTCTGCTGGGACTG
CCGACGGGCGGCGGCGGCGGCCCCGCGGTCGAGCGCTGCGCGCGCGCCGG
CGACCCGCGCGCGTACCCCCTCCCCATCCCCATGGTCCACAAGAAGGACA
TGAACTTCAGCTACGCGGGGCTCAAGAACTCATTCCGCATGACGGTCGAG
CGCGCGCGCGCAGAGCTCGCGCTGAGCGCCGATGCGCCGCTGCCCGATGG
CGCCGTCGCGGACCTTGCCGCGTCGTTCCAGCACGCCGCCATCACGCACC
TCGAGCAGCGCGTGCGCCGCGCCGTGGCGCACTGCCACGCGCGCGGCGTG
CGCACGCTCGCCGTCGTGGGCGGCGTCGCGGCGAACGCGCAGGTGCGCGC
GCGGCTCGGCGCGCTGTGCGCAGCAGCGGGGGAGAGGGACGGGGAGGGGG
GGGGCGCGTGGCGCATGGTCGTGCCGCCGGCACGGCTGTGCACGGACAAC
GGCGTCATGGTGGCGTGGAGCGCGGTGGAGCGGCTGCGGTGCGGCGTGTC
GAACGCGGCGGCGGGGCAGGAGGTGTACGCGCGCGTGCCGCTGGGGCCGC
AGATTGCCGCGGAGGCGAGTGGTAGCGGTGGTGGCGGTAGCAGCCCGAAA
TGA
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