mRNA_11954 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|94198
Unique Name	mRNA_11954
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|94198 vs. uniprot
Match: A0A836C9A8_9STRA (DnaJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9A8_9STRA)

HSP 1 Score: 370 bits (949), Expect = 1.390e-127
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 2

Query:  206 MPRTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYDSAHGISRHDARDGPGGRYYTRPHAGMSHAHSHSSGTQQSQGSSTGMNGSAESETYPGAGRAGHRSYAYAYHGHPRHMESHRGHVGKRQVRERLHSMREARRAEYGARGSTSAQETTSQSGGCTVS 778
            MPRTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYDSAHGISRHDARDGPGGRYYTRPHAGMSHAHSHSSGTQQSQGSSTGMNGSAESETYPGAGRAGHRSYAYAYHGHPRHMESHRGHVGKRQVRERLHSMREARRAEYGARGSTSAQETTSQSGGCTVS
Sbjct:    1 MPRTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYDSAHGISRHDARDGPGGRYYTRPHAGMSHAHSHSSGTQQSQGSSTGMNGSAESETYPGAGRAGHRSYAYAYHGHPRHMESHRGHVGKRQVRERLHSMREARRAEYGARGSTSAQETTSQSGGCTVS 191

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BLAST of jgi.p|Trimin1|94198 vs. uniprot
Match: A0A1F9WW48_9BACT (Chaperone protein DnaJ n=1 Tax=Elusimicrobia bacterium RIFOXYA2_FULL_50_26 TaxID=1797960 RepID=A0A1F9WW48_9BACT)

HSP 1 Score: 84.0 bits (206), Expect = 1.000e-14
Identity = 47/88 (53.41%), Postives = 59/88 (67.05%), Query Frame = 2

Query:  206 MPRTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYDS-AH-GISRHDARDGPGGRYYT 463
            M R +Y IL VA N+T +QIK+AYRQ+ALK HPD NQG K + +QFKE +EAY +LSD Q R++YD   H G+       G GG Y T
Sbjct:    1 MKRDYYEILGVAKNSTADQIKSAYRQLALKYHPDKNQGNKAAEEQFKEINEAYEMLSDGQKRAQYDRFGHAGVGTAPPPPGAGGGYAT 88

[Close]

BLAST of jgi.p|Trimin1|94198 vs. uniprot
Match: A0A382JBP8_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382JBP8_9ZZZZ)

HSP 1 Score: 83.2 bits (204), Expect = 1.040e-14
Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 2

Query:  212 RTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYDS 406
            R +Y +L V  N++PEQIKAAYR++A+K HPD NQG KTS D+FKEASEAY VLSD + +  YD+
Sbjct:    4 RDYYDVLGVQKNSSPEQIKAAYRKLAVKHHPDKNQGNKTSEDKFKEASEAYHVLSDQERKQNYDN 68

[Close]

BLAST of jgi.p|Trimin1|94198 vs. uniprot
Match: A0A7V5FMN5_9BACT (Molecular chaperone DnaJ (Fragment) n=1 Tax=Elusimicrobia bacterium TaxID=2030800 RepID=A0A7V5FMN5_9BACT)

HSP 1 Score: 79.3 bits (194), Expect = 1.520e-14
Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = 2

Query:  206 MPRTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYDS 406
            M R +Y +L V  NA+PE+IK+AYR++ALK HPD N G K + +QFKE +EAY VLS+ Q R++YDS
Sbjct:    1 MKRDYYEVLGVNKNASPEEIKSAYRRLALKYHPDKNPGNKEAEEQFKEINEAYEVLSNQQKRAQYDS 67

[Close]

BLAST of jgi.p|Trimin1|94198 vs. uniprot
Match: D8LEK4_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK4_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.590e-14
Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 2

Query:  212 RTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYDSAHGI 418
            R +Y IL VA  AT  +IKAAYRQIAL VHPDVN+G K S D+FK+ASEAY VL+D + R  YD   G+
Sbjct:    2 RDYYAILRVARTATNSEIKAAYRQIALAVHPDVNKGDKGSEDEFKDASEAYSVLADTEQRRIYDRTLGV 70

[Close]

BLAST of jgi.p|Trimin1|94198 vs. uniprot
Match: A0A0Q4B6U5_9BACT (Chaperone protein DnaJ n=1 Tax=Candidatus [Bacteroides] periocalifornicus TaxID=1702214 RepID=A0A0Q4B6U5_9BACT)

HSP 1 Score: 81.6 bits (200), Expect = 6.800e-14
Identity = 47/89 (52.81%), Postives = 57/89 (64.04%), Query Frame = 2

Query:  212 RTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYDSAHGISRHDARDGPGGRYYTRPHAG 478
            R +Y +L V  NAT E+IK AYRQ ALK HPD N G K + ++FKEA+EAY VLSD Q R++YD       H+   GPGG  Y   HAG
Sbjct:    4 RDYYEVLGVEKNATAEEIKKAYRQCALKYHPDRNPGDKAAEEKFKEAAEAYEVLSDEQKRARYDRFG----HEGMAGPGGGAY---HAG 85

[Close]

BLAST of jgi.p|Trimin1|94198 vs. uniprot
Match: A0A2M7X974_9GAMM (Molecular chaperone DnaJ (Fragment) n=1 Tax=Xanthomonadales bacterium CG_4_9_14_3_um_filter_62_6 TaxID=1974107 RepID=A0A2M7X974_9GAMM)

HSP 1 Score: 74.7 bits (182), Expect = 9.800e-14
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 2

Query:  212 RTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYD 403
            R +Y +L VA NA+ E IK +YR++A+K HPD N G KT+  QFKEA EAY VLSDA  R  YD
Sbjct:    4 RDYYEVLGVAKNASEEDIKKSYRRLAMKHHPDRNAGDKTAESQFKEAKEAYEVLSDAHKRRSYD 67

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BLAST of jgi.p|Trimin1|94198 vs. uniprot
Match: A0A1Q6DMB6_9DELT (Integrase n=1 Tax=Desulfobulbaceae bacterium DB1 TaxID=1920419 RepID=A0A1Q6DMB6_9DELT)

HSP 1 Score: 80.5 bits (197), Expect = 9.820e-14
Identity = 38/63 (60.32%), Postives = 50/63 (79.37%), Query Frame = 2

Query:  218 HYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYDS 406
            +YRIL VA  ATP++IK AYR++A+K HPD NQG K + D+FKEA+EAY VLSD + R +YD+
Sbjct:    6 YYRILGVAKTATPDEIKKAYRKLAMKYHPDKNQGDKKAEDKFKEANEAYAVLSDPEKRKQYDT 68

[Close]

BLAST of jgi.p|Trimin1|94198 vs. uniprot
Match: UPI00158EB762 (molecular chaperone DnaJ n=1 Tax=Victivallis sp. Marseille-Q1083 TaxID=2717288 RepID=UPI00158EB762)

HSP 1 Score: 80.9 bits (198), Expect = 1.240e-13
Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 2

Query:  206 MPRTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYDS-AHGISRHDARDGPGGRY 457
            M + +Y IL VA  ATPE+IK AYR++A+K HPD N G K++ ++FKE S+AY VLSDA  R++YD   H         GPGG Y
Sbjct:    1 MAKDYYEILGVAKTATPEEIKKAYRKLAVKYHPDKNPGDKSAEEKFKEVSQAYEVLSDAGKRAQYDQFGHEAYTSSGGHGPGGGY 85

[Close]

BLAST of jgi.p|Trimin1|94198 vs. uniprot
Match: A0A0A2FLT3_9PORP (Chaperone protein DnaJ n=3 Tax=Porphyromonas crevioricanis TaxID=393921 RepID=A0A0A2FLT3_9PORP)

HSP 1 Score: 80.1 bits (196), Expect = 2.380e-13
Identity = 38/64 (59.38%), Postives = 50/64 (78.12%), Query Frame = 2

Query:  212 RTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEASEAYRVLSDAQTRSKYD 403
            R +Y +L VA NAT E++K AYR++A+K HPD N G K + ++FKEA+EAY VLSDAQ RS+YD
Sbjct:    5 RDYYEVLGVAKNATEEELKKAYRKLAIKYHPDKNPGDKEAEEKFKEAAEAYSVLSDAQKRSRYD 68

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|94198 vs. uniprot

BLAST of jgi.p|Trimin1|94198 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836C9A8_9STRA	1.390e-127	100.00	DnaJ domain-containing protein n=1 Tax=Tribonema m...	[more]
A0A1F9WW48_9BACT	1.000e-14	53.41	Chaperone protein DnaJ n=1 Tax=Elusimicrobia bacte...	[more]
A0A382JBP8_9ZZZZ	1.040e-14	61.54	Uncharacterized protein (Fragment) n=1 Tax=marine ...	[more]
A0A7V5FMN5_9BACT	1.520e-14	56.72	Molecular chaperone DnaJ (Fragment) n=1 Tax=Elusim...	[more]
D8LEK4_ECTSI	2.590e-14	60.87	Heat shock protein 40 like protein/ DnaJ domain co...	[more]
A0A0Q4B6U5_9BACT	6.800e-14	52.81	Chaperone protein DnaJ n=1 Tax=Candidatus [Bactero...	[more]
A0A2M7X974_9GAMM	9.800e-14	57.81	Molecular chaperone DnaJ (Fragment) n=1 Tax=Xantho...	[more]
A0A1Q6DMB6_9DELT	9.820e-14	60.32	Integrase n=1 Tax=Desulfobulbaceae bacterium DB1 T...	[more]
UPI00158EB762	1.240e-13	50.59	molecular chaperone DnaJ n=1 Tax=Victivallis sp. M...	[more]
A0A0A2FLT3_9PORP	2.380e-13	59.38	Chaperone protein DnaJ n=3 Tax=Porphyromonas crevi...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_83	contig	Contig_83:194492..199147 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|94198\|CE94197_22
Description	heat shock protein binding
COG category	O
Max annot lvl	2759\|Eukaryota
EggNOG OGs	COG0484@1\|root,KOG0715@2759\|Eukaryota
Evalue	3.84e-16
Seed ortholog	2880.D8LEK4
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Heat shock protein 40 like protein/ DnaJ domain containing protein
Ec32 ortholog	Ec-23_002700.1
TranscriptId	94520
Track	FilteredModels1
ProteinId	94198

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|94198	gene_11954	Tribonema minus UTEX_B_3156	gene	Contig_83 194492..199147 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|94198	Trimin1\|94198\|CE94197_22	Tribonema minus UTEX_B_3156	polypeptide	Contig_83 194697..199044 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11954_1	exon_11954_1	Tribonema minus UTEX_B_3156	exon	Contig_83 194492..194727 +
exon_11954_2	exon_11954_2	Tribonema minus UTEX_B_3156	exon	Contig_83 194831..194919 +
exon_11954_3	exon_11954_3	Tribonema minus UTEX_B_3156	exon	Contig_83 195631..195822 +
exon_11954_4	exon_11954_4	Tribonema minus UTEX_B_3156	exon	Contig_83 197451..197495 +
exon_11954_5	exon_11954_5	Tribonema minus UTEX_B_3156	exon	Contig_83 197837..197911 +
exon_11954_6	exon_11954_6	Tribonema minus UTEX_B_3156	exon	Contig_83 198901..199147 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_11954	UTR5_11954	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_83 194492..194696 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11954	CDS_11954	Tribonema minus UTEX_B_3156	CDS	Contig_83 194697..194727 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_11954	UTR3_11954	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_83 199045..199147 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_83:194492..199147+
coding sequence from alignment at Contig_83:194492..199147+

spliced messenger RNA

>mRNA_11954 ID=mRNA_11954|Name=jgi.p|Trimin1|94198|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=884bp|location=Sequence derived from alignment at Contig_83:194492..199147+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TGACACCGGACACGGTTCGTTGTGCTACAGTGCGGAGTATCAATACTGTG
TTGACGACTGTCATTCAGCTACAAGGTGCCTGCCCGACTGTGCTGGTGCA
TCACGTTCATCACAGCTCGCGGGGCCAACATAGAAGAGTTGACATCACTC
GGCAAGCGCACCGGCAAAACACCTGCGCACGAACAAGGCGCTTTTGGCTT
TCAAGATGCCGAGGACTCATTACCGCATCCTTGCAGTGGCAACGAATGCT
ACGCCTGAGCAAATCAAGGCCGCGTACCGACAAATTGCTTTAAAGGTGCA
TCCGGACGTGAACCAGGGCTGCAAGACGAGCGCAGACCAATTCAAGGAAG
CGAGTGAGGCGTACAGAGTGTTGAGCGATGCACAAACGCGGAGCAAGTAC
GACAGTGCACATGGCATTAGCAGGCATGATGCGCGTGACGGCCCGGGGGG
TAGATATTACACCAGGCCTCATGCAGGCATGAGCCACGCGCACTCACACA
GCAGTGGCACACAGCAGTCGCAAGGAAGCTCAACGGGAATGAACGGGTCA
GCTGAAAGTGAGACTTACCCAGGTGCGGGACGTGCTGGTCACAGATCATA
CGCCTATGCCTACCACGGGCACCCCAGGCATATGGAGTCTCATCGTGGTC
ATGTCGGTAAGCGACAAGTACGTGAACGTTTGCACAGCATGAGGGAAGCA
AGACGAGCGGAATATGGCGCAAGAGGGAGCACATCAGCACAGGAAACCAC
CTCGCAGTCAGGTGGCTGTACTGTGTCGTGAGTGGCCAAGATGTCATTCT
TCCAAGAATACGGCTTCAAGCCCATGTGCTCAACAAAAGCCACACCGCTC
AGACAAGAGTCTTGTTGGAAGATCACGGACCATT

protein sequence of jgi.p|Trimin1|94198

>Trimin1|94198|CE94197_22 ID=Trimin1|94198|CE94197_22|Name=jgi.p|Trimin1|94198|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=192bp
MPRTHYRILAVATNATPEQIKAAYRQIALKVHPDVNQGCKTSADQFKEAS
EAYRVLSDAQTRSKYDSAHGISRHDARDGPGGRYYTRPHAGMSHAHSHSS
GTQQSQGSSTGMNGSAESETYPGAGRAGHRSYAYAYHGHPRHMESHRGHV
GKRQVRERLHSMREARRAEYGARGSTSAQETTSQSGGCTVS*

mRNA from alignment at Contig_83:194492..199147+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11954 ID=mRNA_11954|Name=jgi.p|Trimin1|94198|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4656bp|location=Sequence derived from alignment at Contig_83:194492..199147+ (Tribonema minus UTEX_B_3156 )
TGACACCGGACACGGTTCGTTGTGCTACAGTGCGGAGTATCAATACTGTG
TTGACGACTGTCATTCAGCTACAAGGTGCCTGCCCGACTGTGCTGGTGCA
TCACGTTCATCACAGCTCGCGGGGCCAACATAGAAGAGTTGACATCACTC
GGCAAGCGCACCGGCAAAACACCTGCGCACGAACAAGGCGCTTTTGGCTT
TCAAGATGCCGAGGACTCATTACCGCATCCTTGCAGGTGAGCACAGTGGT
GTTGCTTTTGCTGTTGTCTAGCTGCTCCACTGTTCCTGACGCAACAGGGG
ACTGATAGTGCCTTGCCGCATTGCTTGCGCGTGATGCAGTGGCAACGAAT
GCTACGCCTGAGCAAATCAAGGCCGCGTACCGACAAATTGCTTTAAAGGT
GCATCCGGACGTGAACCAGGGCTGCAAGGTAAACCAATTAATTAATCTCA
TCGATAGAACAGGTTCGTTTCAAGCTTGTGCAATATTCGACTGTGCACCT
GTTGCGCCCTTGTGGCTGCAAACATATCTATTGAATACAAGCGATCGAAG
CGTGTGACAACAGTGCCTTTGCTCAGGTCAGCTGGTCCTGTCCAATGTAA
ATGCTCTGTTAGTTACTGCAACATCATTGCATGCTTTGACTCACCCACTT
GCTTCTAGTCAAATGTGATGCCTCCTGGGTCATGATGTGCATACAAGCTT
GAGTACTGAAGGCTCAAGCAGCGTCGCCTTGTGGGCATGTCGTATGTGGA
AGGCATGTGTGACTTGCACTTGCTGAATCACTAGTGCGTGTCAGCATTAC
CATGCGTATGATTCCCTTGGTTGATCAGTCGGCACAGAGCTTGAGCTGCC
GATCTCTGCTGGCCACTGTTATCCAGGCGCATTTGTCGGCTGCCTTGTGC
TATCCCAGGGTTTTGCATTTGGATAATCCTATCTGGCGTACTCAATCCTG
CAGCAACAAAGAAGCCATGTATTGCGACATACCATGTGCTGATATGGTTG
TGTGGGTGTGGTGTGGGCATGTCCATCTACTTGGGCTCAAGGGCTGTGCT
TGGCTTCTTACGATTTCGCGCAACAATTTACACCCACACGATATGAATGC
TGATCATTGCTGGTCTGATCTGCTTGTGTGGTTTTGCAGACGAGCGCAGA
CCAATTCAAGGAAGCGAGTGAGGCGTACAGAGTGTTGAGCGATGCACAAA
CGCGGAGCAAGTACGACAGTGCACATGGCATTAGCAGGCATGATGCGCGT
GACGGCCCGGGGGGTAGATATTACACCAGGCCTCATGCAGGCATGAGCCA
CGCGCACTCACACAGCAGTGGCACACAGCAGGTGGGTCTTTAGTGCTCAA
GTATGCCAGCTGTAGTTACTCTATGCATACTAGTGTCATCGCGTTCAGCA
AGTGGCAATCACGGCTATGGTTATCGACACAATTTCAAAAGCCCTTGGGG
CGACTGCATTGTGAGCTCCACTGCGCTCACAATATGTAGCAGTACCTTTT
GTGATGCTCACAATAATACGGCCCCCCACCTTTTTTCAACAAGCTTATGT
CCACCACGTTGCAGTGCACTGTTGTGTGCCACTACACGCAACACCATCAA
AACTGCAAGTCAGTCAAGAAAAACCTTGGTTTCACCCACACTAGCACAAT
CAGCTGCTGCTGCTCGCTGGTGCTGCTGAATTTGCCTGACTGTGCAGAAC
ATGCAACATGCAGCGCCATTGATCTTGCGGCAACTTGAGCGCGAGTGCCA
CCAGCTTTACATGAGGCCTCTTCTGATGTCACCGCCTAACCTGACTTCGG
GGGGGTTGTGGAACTCAGTTCTAGGCACTGGTGTTTCACCACTGGACGAG
TGCCCGGTAGTGGGGGTCGTTGCGGCATGCTAATCGAGCCTCAACACATA
TGAATAGATGTACCGCACCCTTTGATAGGGTGAAAATTAGGGCGCTCCAC
CCCCCATTCCCACATAAATGTCCCACCATGGGCTTATTTCAAACAAGCTG
TTTGCGATTATATTGTACTGAGGCCTTGGCCTCAAAAGATAAATCCAAGG
TGCAACATTTGGTGCTGTAGATGCATTCTTTACGCGTACTCCTTGGCGCG
AATTTTACAAAGTTGTTCATGAGGTGCTGGCACCACCTTCTCGCTGCTGT
AAGCTTGCCGTAGCGCGAGTTCACCGGATTGTCATGCTGAACGCTCAACA
ATGCAAGTTCTTGACATTGTTCAATGCACTGTTGGCTTTAGCTCTGCGTC
AAGTAATGCGCAGTTACTTGAAGCGCTGGATGTGCAATCAACATGCTGTA
CAGCAGCCACCAGCAGCAATAATCTGAAATGATTGTGAAGTTCTTATGTT
TTGGCGACGGACTCACCACCATAGTAAATGGTCACTTGTCAATCAGCGCT
TGCTGAAGTTTTGTGACAAGAGTGATGTCATGTGCCAGGAATGTCATGGA
GCCACATAGATGCACACTTCAATACATGTGGACCATCATCGTATCGTCTA
AGGGTATTTACAAAATCACATTTCTGGCGTCAAAGCTTGCACTGAGGCGT
GCACCTCACAAGATAGCTTGCGAAAGCACCAGCCATGGCCATTGTATGCC
ATGACCATGCCATAACCAGCCATATGGTGTTCTGTCTTTAGCTTGCTGTT
CCTCATCGCCAGCAACAGCCAGGAACCAGTTGTGGCAACAGTGTGGTGTT
GCTAGCAATTATTTCACTCAAGCAGGCAGATGACAGTCAAATAGACGCGT
GCATGCGTGAGCCGCTCTAATGCACTGGGCCCCTATCTGGTTTGTTAGGA
GTCCCTGCTTGGTATTGCTGTTGCTTAGGGAAACGCCCCTGACTTGGCGG
TTGTGCACATGCAATCGTATCATCAGTTTGCTTCAGGGGACACTGCTCTG
CACCTGCCTGAACTGCAAACATTGATGCTCTGTTGCACGTTGATTTGATG
CTGGTGCAGTCGCAAGGAAGCTCAACGGGAATGAACGGGTCAGCTGAAAG
TGAGGTGAGCCTTTGCTCTCAATGAGTTGTGTCTCAAGAAACTATAGAAG
CGGGTGTCACGAAGCTGCATACGAGCAGCATATGCTGTGTGTGCCCCATG
GTCGCTCTTGCACGCTGCTTGGTGTGGTACAACATATGGGTCGGCAGTGG
CCATGCTTGGAACATCAAAGAGTTCACGTAGTAGATGAGGACATTGCAGG
AAGCATTGCGCTACAACTATTGGTATTAGAACTGCTTAATATGTTGGGTG
CTGCACGTTTGCACGCACAAGCAAGACGTGTGCAAGCACACATGTGCTTT
CTTCTAATGTTACAGATGAACTGTTTGTTCCTTTGTAAACGACAGACTTA
CCCAGGTGCGGGACGTGCTGGTCACAGATCATACGCCTATGCCTACCACG
GGCACCCCAGGCATATGGAGGTAAGTTGACGATGGCTTGACACTGCTTTC
ACTTCTTCTGATCAAATAGTGTCAATGCCAATTTTCAAGCCTACAACAGC
AAAGCATGTGTGCATAGAACAGCTCATTTCATCGTGCAACTTCTTCAGCC
ACGCAACCTGTGTTGATTTTACACTACTGCAATGAACAGATACGGCCTGT
GGCGCAATGCACCAAATGGTTTGATCATGTAGACCAGAAAGTGTTGGTCT
GGAGGTGGCGCCATCAGCGCAAATGTCTTCAGATGATGCTGGTGCTCTGA
AATAAACGCGTGAGTGTGTGTGCTCTGCGCCTGCGCTTTCAGCAGGCCGC
AGCAGTGCGCGTGGCCATGCTCATGTGCCACTACATGTTGGGGTGTGGCG
CATGGATGTTTGTAGGTACATCAGCAGGCCTGCTTGCCAGGCACAATATT
TTTCCAATGCTGTGGCATGGCCTTCAGCATTTTTTTGTTGACGCTATCAG
TGTGTCCTTGACAGAAGTTGCTTGAGATTCAAATGCAGACGCACGAGTTT
TGGCTAGACGTAAGCGTTGTGATGTGGTGTTTGCCGTGTAGTACATGGGC
ATGTGAAACAAGCTCAGCAAGCGAAGCGCCTCATTGCATTGCAGTTTTTA
GTGACTCATACTTCTACACAAAACGGCTCAAGTTCTTTCACCTAACAACA
ACGACCTTCCTTGTTAAATTGTGGTACTTTTTGAAGTGAGTCAAGAGGAA
GTGTCGCGCATGTAGATGCGGTGACAATGGTTTTGCAAGTTGTATATCTT
AAAGGACGTTCATTATCACTTCTTTCTATGCGCTCCTTGGCTCATTAAGG
CGCGTTCTGAAATGTTGGAGGGCACCTGACTCCTGGCTTCAGTTGTATCC
AGCTACAACGCGTAAAGAAATACCTCGACACACTAAATGCATGAGCGGCT
GACCTATCATATCTATATCATTCAAGTCTTCTGTACGCCATTATCCCTGT
TCCATGCAGTCTCATCGTGGTCATGTCGGTAAGCGACAAGTACGTGAACG
TTTGCACAGCATGAGGGAAGCAAGACGAGCGGAATATGGCGCAAGAGGGA
GCACATCAGCACAGGAAACCACCTCGCAGTCAGGTGGCTGTACTGTGTCG
TGAGTGGCCAAGATGTCATTCTTCCAAGAATACGGCTTCAAGCCCATGTG
CTCAACAAAAGCCACACCGCTCAGACAAGAGTCTTGTTGGAAGATCACGG
ACCATT

Coding sequence (CDS) from alignment at Contig_83:194492..199147+

>mRNA_11954 ID=mRNA_11954|Name=jgi.p|Trimin1|94198|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=576bp|location=Sequence derived from alignment at Contig_83:194492..199147+ (Tribonema minus UTEX_B_3156 )
ATGCCGAGGACTCATTACCGCATCCTTGCAGTGGCAACGAATGCTACGCC
TGAGCAAATCAAGGCCGCGTACCGACAAATTGCTTTAAAGGTGCATCCGG
ACGTGAACCAGGGCTGCAAGACGAGCGCAGACCAATTCAAGGAAGCGAGT
GAGGCGTACAGAGTGTTGAGCGATGCACAAACGCGGAGCAAGTACGACAG
TGCACATGGCATTAGCAGGCATGATGCGCGTGACGGCCCGGGGGGTAGAT
ATTACACCAGGCCTCATGCAGGCATGAGCCACGCGCACTCACACAGCAGT
GGCACACAGCAGTCGCAAGGAAGCTCAACGGGAATGAACGGGTCAGCTGA
AAGTGAGACTTACCCAGGTGCGGGACGTGCTGGTCACAGATCATACGCCT
ATGCCTACCACGGGCACCCCAGGCATATGGAGTCTCATCGTGGTCATGTC
GGTAAGCGACAAGTACGTGAACGTTTGCACAGCATGAGGGAAGCAAGACG
AGCGGAATATGGCGCAAGAGGGAGCACATCAGCACAGGAAACCACCTCGC
AGTCAGGTGGCTGTACTGTGTCGTGA