mRNA_11857 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351914
Unique Name	mRNA_11857
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|351914 vs. uniprot
Match: A0A835ZKE6_9STRA (NopRA1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKE6_9STRA)

HSP 1 Score: 1441 bits (3729), Expect = 0.000e+0
Identity = 984/984 (100.00%), Postives = 984/984 (100.00%), Query Frame = 1

Query:    1 MRRGAAAGMRHGAATGVLHRLLSRATRVCMTHSLAVSNIAAGVMAPLLAHYTGSLSSRDVLTARLLRLYQDAGALPPRAAALRWACAEDEDAVDDAQPPQQQPKXXXXXXXXXXXLQPKVPWHHGRRHGSAYARGPPPPPWLSEPSIARRFRASIGAFPLRRPLEPPPLPFEPAFEQMGGEGGREGAPGSGNGDVQLEDDGDAMSVDGDDAADAASDGTDAEGGQSEXXXXXXXXXXXXXQCSAAADAAAAHEVLDPAFVLPLLDDALSTAGCAVARQVCESGALAYCLAATASLRACTRAAALACLQRLLSVVEGDACAADTAFKQRPQATPPAPCRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLTATVCPRRVPCAQLLLLLRSLRDGVTDPSARVPTLVAVSLAHAADVLASTPAHDAYVAINRFLLRRPNIKMNEVPFFTTLVSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRACNWALRLLRDGVRTGQDLGTAARAHAAPLLLLLLDAADGAATRGAALEALAAVARLRRGGARYLLRRAGVVAWARLALSRAAAPAADARPHMYRRQAGVAATAASLAALLRLLRDLLSAGLQLRVPLLPEEYALLAPEVAAXXXXXXXXWLPQLSASPSGEHDDDAEAPASTAVADVTAEVQQEPQAVVAALELLADTAAAAAAEGRPGLLLPVSTAQQLLLAAQRVAPAXXXXXXXXXXXXXXXVLRLAAAVSADDEVTHALAADRRLLCALLALPSAVTSHARNCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEANSVRVQVAHALLQALPPXXXXXXXXXXDAVRDGDGDNGDGSARWAARMACTALQRLLLSPSADCSDVARAVPPGLCDDATVQRIVAALRPVCGSGFGDRSSAGGDGVKRKKRHGDGGGDGSHQVGIKRKSGSKSVAAVPATAVKAAVPSKRKRRKSS 2952
            MRRGAAAGMRHGAATGVLHRLLSRATRVCMTHSLAVSNIAAGVMAPLLAHYTGSLSSRDVLTARLLRLYQDAGALPPRAAALRWACAEDEDAVDDAQPPQQQPKXXXXXXXXXXXLQPKVPWHHGRRHGSAYARGPPPPPWLSEPSIARRFRASIGAFPLRRPLEPPPLPFEPAFEQMGGEGGREGAPGSGNGDVQLEDDGDAMSVDGDDAADAASDGTDAEGGQSEXXXXXXXXXXXXXQCSAAADAAAAHEVLDPAFVLPLLDDALSTAGCAVARQVCESGALAYCLAATASLRACTRAAALACLQRLLSVVEGDACAADTAFKQRPQATPPAPCRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLTATVCPRRVPCAQLLLLLRSLRDGVTDPSARVPTLVAVSLAHAADVLASTPAHDAYVAINRFLLRRPNIKMNEVPFFTTLVSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRACNWALRLLRDGVRTGQDLGTAARAHAAPLLLLLLDAADGAATRGAALEALAAVARLRRGGARYLLRRAGVVAWARLALSRAAAPAADARPHMYRRQAGVAATAASLAALLRLLRDLLSAGLQLRVPLLPEEYALLAPEVAAXXXXXXXXWLPQLSASPSGEHDDDAEAPASTAVADVTAEVQQEPQAVVAALELLADTAAAAAAEGRPGLLLPVSTAQQLLLAAQRVAPAXXXXXXXXXXXXXXXVLRLAAAVSADDEVTHALAADRRLLCALLALPSAVTSHARNCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEANSVRVQVAHALLQALPPXXXXXXXXXXDAVRDGDGDNGDGSARWAARMACTALQRLLLSPSADCSDVARAVPPGLCDDATVQRIVAALRPVCGSGFGDRSSAGGDGVKRKKRHGDGGGDGSHQVGIKRKSGSKSVAAVPATAVKAAVPSKRKRRKSS
Sbjct:    1 MRRGAAAGMRHGAATGVLHRLLSRATRVCMTHSLAVSNIAAGVMAPLLAHYTGSLSSRDVLTARLLRLYQDAGALPPRAAALRWACAEDEDAVDDAQPPQQQPKXXXXXXXXXXXLQPKVPWHHGRRHGSAYARGPPPPPWLSEPSIARRFRASIGAFPLRRPLEPPPLPFEPAFEQMGGEGGREGAPGSGNGDVQLEDDGDAMSVDGDDAADAASDGTDAEGGQSEXXXXXXXXXXXXXQCSAAADAAAAHEVLDPAFVLPLLDDALSTAGCAVARQVCESGALAYCLAATASLRACTRAAALACLQRLLSVVEGDACAADTAFKQRPQATPPAPCRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLTATVCPRRVPCAQLLLLLRSLRDGVTDPSARVPTLVAVSLAHAADVLASTPAHDAYVAINRFLLRRPNIKMNEVPFFTTLVSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRACNWALRLLRDGVRTGQDLGTAARAHAAPLLLLLLDAADGAATRGAALEALAAVARLRRGGARYLLRRAGVVAWARLALSRAAAPAADARPHMYRRQAGVAATAASLAALLRLLRDLLSAGLQLRVPLLPEEYALLAPEVAAXXXXXXXXWLPQLSASPSGEHDDDAEAPASTAVADVTAEVQQEPQAVVAALELLADTAAAAAAEGRPGLLLPVSTAQQLLLAAQRVAPAXXXXXXXXXXXXXXXVLRLAAAVSADDEVTHALAADRRLLCALLALPSAVTSHARNCEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEANSVRVQVAHALLQALPPXXXXXXXXXXDAVRDGDGDNGDGSARWAARMACTALQRLLLSPSADCSDVARAVPPGLCDDATVQRIVAALRPVCGSGFGDRSSAGGDGVKRKKRHGDGGGDGSHQVGIKRKSGSKSVAAVPATAVKAAVPSKRKRRKSS 984

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BLAST of jgi.p|Trimin1|351914 vs. uniprot
Match: I0YZ35_COCSC (Uncharacterized protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZ35_COCSC)

HSP 1 Score: 63.2 bits (152), Expect = 3.600e-6
Identity = 62/183 (33.88%), Postives = 80/183 (43.72%), Query Frame = 1

Query: 1162 AQLLLLLRSLRDGVTDPSARVPTLVAVSLAHAADVLASTPAHDAYVAINRFLLRRPNIKMNEVPFFTTLVSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRACNWALRLLRDGVRTGQDLGTAARAHAAPLLLLLLDAADG-AATRGAALEALAAVARLRRGGARYLLRRAGVVAW 1707
            AQL+LLLR+LR  V  P  R+PTL A+ L+ AA  LA  PA D Y A+NR LLRR  + + + P    L+S                                        W LRLL  G R+  D     R   A LL+ L D+  G AA +  AL  L +  +     A  L++ AGVV W
Sbjct: 1537 AQLVLLLRALRLSVERPFQRLPTLTALFLSEAACALAH-PAADMYPALNRHLLRRATLDIQDAPLLKQLLSSGGQEQAAERL-----------------------------WLLRLLAAGFRSSADGDIFRRRFVAELLMSLHDSPLGDAALQAVALRTLCSAPQCAPTYAADLVQHAGVVFW 1689

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BLAST of jgi.p|Trimin1|351914 vs. uniprot
Match: A0A7S4KYR4_GUITH (Hypothetical protein (Fragment) n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KYR4_GUITH)

HSP 1 Score: 57.8 bits (138), Expect = 1.480e-5
Identity = 48/185 (25.95%), Postives = 81/185 (43.78%), Query Frame = 1

Query: 1174 LLLRSLRDGVTDPSARVPTLVAVSLAHAADVLASTPAHDAYVAINRFLLRRPNIKMNEVPFFTTLVSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRACNWALRLLRDGVRTGQDLGTAARAHAAPLLLLLLDAAD-GAATRGAALEALAAVARLRRGGARYLLRRAGVVAWARLALS 1725
            +LLRSLRD +T P  ++P +V   +A +  ++   PAH  +  +  FLL+RP + +NE+P    +++                                       +W +R+L+   R+  D     + H   LL+   D+   G  T  + L+ L A +    G   YL+ +AGV+AW R +LS
Sbjct:   29 ILLRSLRDAITQPLQKLPVIVTCFVAESIPIVLR-PAHPLFQPVTSFLLQRPFLDLNEIPMLYQMLNSGGASWRTER-----------------------------DWCIRMLKHAPRSEHDRSIFRKRHVLSLLMATHDSFSCGNDTSCSILQVLLAFSHTPSGSV-YLVEQAGVLAWIRSSLS 182

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BLAST of jgi.p|Trimin1|351914 vs. uniprot
Match: A0A433QS70_9FUNG (Uncharacterized protein n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QS70_9FUNG)

HSP 1 Score: 58.5 bits (140), Expect = 9.010e-5
Identity = 34/80 (42.50%), Postives = 51/80 (63.75%), Query Frame = 1

Query: 1165 QLLLLLRSLRDGVTD-------PSARVPTLVAVSLAHAADVLASTPAHDAYVAINRFLLRRPNIKMNEVPFFTTLVSGSS 1383
            Q+LLLL SL++ +TD        + R+PT++ V +AHA  +L   PAH  Y  +NRFLL+RP I + ++P F +L + SS
Sbjct: 1781 QILLLLDSLKNAITDCGDHLDPMTQRIPTIITVFVAHAFAILLQ-PAHFMYPHVNRFLLQRPFIDLEDIPMFYSLFNTSS 1859

[Close]

BLAST of jgi.p|Trimin1|351914 vs. uniprot
Match: A0A0D2WMT1_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WMT1_CAPO3)

HSP 1 Score: 58.5 bits (140), Expect = 9.310e-5
Identity = 39/143 (27.27%), Postives = 68/143 (47.55%), Query Frame = 1

Query: 1165 QLLLLLRSLRDGVTDPSARVPTLVAVSLAHAADVLASTPAHDAYVAINRFLLRRPNIKMNEVPFFTTLVSGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRACNWALRLLRDGVRTGQDLGTAARAHAAPLLLLLLD 1593
            QL +LL SLR+ V   + ++P+++   + HAA V+ ++ AH  Y  +N++LL RP ++++++P F  L + S+                                 +  NW LR+L  GVRT  DL    R H   +L+  ++
Sbjct: 2316 QLRVLLMSLRNAVVSRAQQLPSVLMSVVVHAARVVTNS-AHPLYATLNKYLLARPALELDDIPMFYQLFN-SATLDSASLSSAAALQIDSGAKSGSNNAGEQPLHRKERNWLLRVLATGVRTKMDLDVLRRRHVPEMLMAFIN 2456

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351914 vs. uniprot

BLAST of jgi.p|Trimin1|351914 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A835ZKE6_9STRA	0.000e+0	100.00	NopRA1 domain-containing protein n=1 Tax=Tribonema...	[more]
I0YZ35_COCSC	3.600e-6	33.88	Uncharacterized protein n=1 Tax=Coccomyxa subellip...	[more]
A0A7S4KYR4_GUITH	1.480e-5	25.95	Hypothetical protein (Fragment) n=1 Tax=Guillardia...	[more]
A0A433QS70_9FUNG	9.010e-5	42.50	Uncharacterized protein n=2 Tax=Jimgerdemannia fla...	[more]
A0A0D2WMT1_CAPO3	9.310e-5	27.27	Uncharacterized protein n=1 Tax=Capsaspora owczarz...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_102	contig	Contig_102:549537..558972 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351914\|estExt_Genemark1.C_Ctg_1020070
BRITE	ko00000,ko00001,ko00002,ko01000,ko03009
KEGG rclass	RC00435
KEGG Reaction	R01826
KEGG Module	M00022
KEGG Pathway	ko00400,ko01100,ko01110,ko01130,ko01230,ko02024,map00400,map01100,map01110,map01130,map01230,map02024
KEGG ko	ko:K01626,ko:K07766,ko:K14861
EC	2.5.1.54,3.6.1.52
GOs	GO:0001650,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0070013
Preferred name	URB1
Description	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG1791@1\|root,KOG1791@2759\|Eukaryota
Evalue	3.43e-18
Seed ortholog	2880.D7G8A9
Hectar predicted targeting category	mitochondrion
TranscriptId	352236
Track	FilteredModels1
ProteinId	351914

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351914	gene_11857	Tribonema minus UTEX_B_3156	gene	Contig_102 549537..558972 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11857_12	exon_11857_12	Tribonema minus UTEX_B_3156	exon	Contig_102 549537..550526 -
exon_11857_11	exon_11857_11	Tribonema minus UTEX_B_3156	exon	Contig_102 550767..551211 -
exon_11857_10	exon_11857_10	Tribonema minus UTEX_B_3156	exon	Contig_102 551699..551955 -
exon_11857_9	exon_11857_9	Tribonema minus UTEX_B_3156	exon	Contig_102 552779..552965 -
exon_11857_8	exon_11857_8	Tribonema minus UTEX_B_3156	exon	Contig_102 553541..553856 -
exon_11857_7	exon_11857_7	Tribonema minus UTEX_B_3156	exon	Contig_102 554151..554310 -
exon_11857_6	exon_11857_6	Tribonema minus UTEX_B_3156	exon	Contig_102 555767..555978 -
exon_11857_5	exon_11857_5	Tribonema minus UTEX_B_3156	exon	Contig_102 556796..557060 -
exon_11857_4	exon_11857_4	Tribonema minus UTEX_B_3156	exon	Contig_102 558105..558149 -
exon_11857_3	exon_11857_3	Tribonema minus UTEX_B_3156	exon	Contig_102 558264..558453 -
exon_11857_2	exon_11857_2	Tribonema minus UTEX_B_3156	exon	Contig_102 558525..558622 -
exon_11857_1	exon_11857_1	Tribonema minus UTEX_B_3156	exon	Contig_102 558949..558972 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_11857	UTR3_11857	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_102 549537..549770 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11857	CDS_11857	Tribonema minus UTEX_B_3156	CDS	Contig_102 558949..558972 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351914	Trimin1\|351914\|estExt_Genemark1.C_Ctg_1020070	Tribonema minus UTEX_B_3156	polypeptide	Contig_102 549771..558972 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_102:549537..558972-
coding sequence from alignment at Contig_102:549537..558972-

spliced messenger RNA

>mRNA_11857 ID=mRNA_11857|Name=jgi.p|Trimin1|351914|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3189bp|location=Sequence derived from alignment at Contig_102:549537..558972- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCCGCGGCGCCGCTGCCGGCATGCGCCACGGCGCCGCTACTGGCGT
GCTACACCGTCTCCTGAGCCGTGCCACGCGCGTGTGCATGACGCACTCGC
TCGCCGTTTCCAACATCGCAGCGGGCGTCATGGCGCCGCTGCTGGCGCAC
TACACGGGCTCGCTCTCAAGCCGCGACGTGTTAACGGCGCGGCTGCTGCG
CCTGTACCAGGACGCCGGCGCGCTGCCGCCGCGCGCCGCGGCGCTGCGCT
GGGCGTGCGCGGAGGACGAGGACGCGGTCGATGACGCTCAGCCGCCGCAG
CAGCAACCTAAGGACGAGGACGCGGTCGCTGACGCTCAGGCGCCGCTGCA
ACCCAAGGTGCCATGGCACCACGGCAGGCGGCACGGCAGCGCCTACGCGC
GCGGCCCTCCGCCGCCCCCCTGGCTGTCGGAACCGTCCATCGCGCGGCGG
TTCCGCGCCAGCATAGGCGCATTTCCGCTGCGGCGGCCACTGGAGCCGCC
GCCGCTGCCGTTTGAGCCTGCGTTCGAGCAAATGGGGGGCGAGGGCGGGC
GCGAAGGAGCGCCGGGGAGCGGCAATGGTGATGTTCAACTTGAAGATGAT
GGGGATGCGATGAGCGTTGACGGCGACGACGCAGCGGATGCGGCCAGCGA
CGGGACCGACGCGGAGGGCGGCCAGTCTGAGTCAGAGTCAGAGTCACCGC
GCAGCGAGATGGAAATGCAGCAGTGCTCGGCAGCTGCGGACGCCGCGGCG
GCGCACGAGGTGCTGGACCCCGCGTTTGTGCTGCCGCTGCTGGATGATGC
GCTGTCAACTGCGGGGTGCGCCGTCGCGAGACAGGTGTGCGAGTCGGGGG
CGCTTGCGTACTGCCTTGCGGCGACGGCGAGCCTGCGCGCCTGCACGCGC
GCCGCCGCGCTCGCGTGCCTGCAGCGGCTGCTGAGCGTTGTGGAGGGCGA
CGCGTGCGCCGCGGACACGGCCTTCAAGCAGCGACCGCAGGCAACACCAC
CTGCTCCCTGTCGCCCTCCGCCAACCCTGCTGCTGCCGCCGCCGCTGCTG
CTGCTGCCACCGCTGCTGCCACCGCTGCCGCCGCTGCTGCCGCTGCTGCT
GCCGCGGCCGCCGCTGCTGCTGCTGCTCACTGCCACCGTCTGCCCGCGCC
GTGTCCCCTGCGCGCAGCTGCTGCTGCTGCTGCGCAGCCTGCGCGACGGC
GTCACGGACCCTTCCGCGCGCGTTCCGACGCTCGTCGCCGTGTCGTTGGC
GCACGCCGCCGATGTTCTGGCGTCCACGCCCGCGCACGACGCATACGTAG
CCATCAACAGGTTTCTGCTCCGCCGGCCGAACATCAAGATGAATGAAGTT
CCATTCTTCACCACCCTAGTGTCAGGGTCTAGCAGCAGCGCCGCTTCCGC
TGCCGGCGCCGCCGCCGCTGCGGCCGCCGCCGCCGCTGCTGCGAGCTCTT
ACGGCGCCGGTGGCGCCGGCGCAGCTGCAGCGCGCGCATGCAACTGGGCG
TTGCGCCTTCTGCGCGACGGCGTGCGCACCGGCCAGGACCTCGGCACGGC
CGCGCGCGCGCACGCAGCGCCGCTGCTGCTGCTGCTGCTGGACGCCGCCG
ACGGCGCGGCGACGCGCGGCGCGGCGCTGGAGGCGCTGGCGGCGGTGGCG
CGGCTGCGGCGCGGCGGCGCGCGCTACCTGCTGCGCCGCGCCGGCGTCGT
CGCGTGGGCGCGGCTCGCGCTGTCGCGCGCGGCGGCGCCGGCGGCGGACG
CAAGACCGCACATGTATCGACGCCAGGCAGGCGTCGCCGCCACCGCCGCG
TCGCTGGCGGCGCTGCTGCGCCTGCTGCGCGACCTGCTGTCCGCAGGACT
GCAGCTGCGCGTGCCGCTGCTGCCGGAAGAGTACGCCCTGCTGGCGCCGG
AGGTGGCGGCGGCGGCGGCAGCGGCGGCGGCGGCGTGGCTCCCGCAGCTA
TCCGCCTCGCCCTCCGGCGAGCACGATGACGATGCTGAGGCGCCTGCGTC
AACAGCGGTGGCGGATGTCACTGCTGAAGTGCAGCAGGAGCCGCAGGCGG
TGGTGGCAGCGCTCGAATTGCTCGCTGACACGGCGGCTGCGGCGGCGGCG
GAGGGGCGGCCGGGGCTGCTGCTGCCAGTGTCAACGGCTCAGCAGCTGCT
GCTGGCGGCGCAGCGCGTCGCGCCGGCGGCGCCCGCAGCCATCGCGGCTT
TGTCGGCGGCGCAGGCGGCGGCGGTGCTGCGGCTCGCTGCTGCCGTCTCC
GCAGACGACGAGGTCACGCACGCGCTCGCCGCAGACCGTCGCCTGCTGTG
CGCGTTGCTCGCGCTGCCGAGCGCTGTCACCTCACACGCGCGCAACTGCG
AAGCCGCTGCGGCGGCAGCGCCGGCTGCCGCAGCGAAGACGGCGGCTGCG
GCGGCGGTGCTGCTGCCGCTGCTCGCGGCGACCGTCGTCGCTTCCATCGT
AGCGACCGCGTCACCGCCTCAGCAGGAGGCAAACAGCGTTCGCGTGCAGG
TGGCACACGCGCTGCTGCAAGCGCTGCCGCCGCCGCCCGTAGCCGCTGCG
GCCGCTGCCGCCGATGCTGTGCGCGACGGCGACGGCGACAACGGCGATGG
CAGCGCGCGGTGGGCGGCGCGCATGGCGTGCACGGCGCTGCAGCGGCTGC
TGCTCAGTCCGAGCGCAGACTGTTCTGATGTAGCGCGTGCGGTCCCCCCG
GGACTGTGCGACGATGCCACGGTGCAGCGCATCGTCGCGGCACTACGCCC
AGTTTGCGGCAGCGGCTTCGGCGACAGGTCGAGTGCGGGAGGCGATGGTG
TGAAGCGCAAGAAGAGGCATGGCGACGGCGGCGGCGACGGAAGCCATCAA
GTCGGCATCAAGCGGAAAAGTGGCAGTAAGAGTGTTGCTGCAGTGCCCGC
CACCGCTGTGAAGGCAGCAGTGCCCAGCAAGCGCAAGCGCCGCAAGAGCA
GCTGAATGCCGGCCGCAGCGGCATGGCCTGAAGTAATGACGGCAGCGACA
CAAACACCGTCCAATTGACTTTGAGCTCATTGTCGCCAGTGGCGACACAC
TTTATGCAGCTGTTGTGTGCATGCGCAACCCATGTTGGGCTGCACGCAAC
GACATGGGCTGCTGCAGCGTCCGGTGCCCCTCTTACCTGCGCCAGTGTGC
GGATTTTCTCATGTCAATTTTTAAGCAAATTTAGGTTGC

protein sequence of jgi.p|Trimin1|351914

>Trimin1|351914|estExt_Genemark1.C_Ctg_1020070 ID=Trimin1|351914|estExt_Genemark1.C_Ctg_1020070|Name=jgi.p|Trimin1|351914|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=985bp
MRRGAAAGMRHGAATGVLHRLLSRATRVCMTHSLAVSNIAAGVMAPLLAH
YTGSLSSRDVLTARLLRLYQDAGALPPRAAALRWACAEDEDAVDDAQPPQ
QQPKDEDAVADAQAPLQPKVPWHHGRRHGSAYARGPPPPPWLSEPSIARR
FRASIGAFPLRRPLEPPPLPFEPAFEQMGGEGGREGAPGSGNGDVQLEDD
GDAMSVDGDDAADAASDGTDAEGGQSESESESPRSEMEMQQCSAAADAAA
AHEVLDPAFVLPLLDDALSTAGCAVARQVCESGALAYCLAATASLRACTR
AAALACLQRLLSVVEGDACAADTAFKQRPQATPPAPCRPPPTLLLPPPLL
LLPPLLPPLPPLLPLLLPRPPLLLLLTATVCPRRVPCAQLLLLLRSLRDG
VTDPSARVPTLVAVSLAHAADVLASTPAHDAYVAINRFLLRRPNIKMNEV
PFFTTLVSGSSSSAASAAGAAAAAAAAAAAASSYGAGGAGAAAARACNWA
LRLLRDGVRTGQDLGTAARAHAAPLLLLLLDAADGAATRGAALEALAAVA
RLRRGGARYLLRRAGVVAWARLALSRAAAPAADARPHMYRRQAGVAATAA
SLAALLRLLRDLLSAGLQLRVPLLPEEYALLAPEVAAAAAAAAAAWLPQL
SASPSGEHDDDAEAPASTAVADVTAEVQQEPQAVVAALELLADTAAAAAA
EGRPGLLLPVSTAQQLLLAAQRVAPAAPAAIAALSAAQAAAVLRLAAAVS
ADDEVTHALAADRRLLCALLALPSAVTSHARNCEAAAAAAPAAAAKTAAA
AAVLLPLLAATVVASIVATASPPQQEANSVRVQVAHALLQALPPPPVAAA
AAAADAVRDGDGDNGDGSARWAARMACTALQRLLLSPSADCSDVARAVPP
GLCDDATVQRIVAALRPVCGSGFGDRSSAGGDGVKRKKRHGDGGGDGSHQ
VGIKRKSGSKSVAAVPATAVKAAVPSKRKRRKSS*

mRNA from alignment at Contig_102:549537..558972-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11857 ID=mRNA_11857|Name=jgi.p|Trimin1|351914|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=9436bp|location=Sequence derived from alignment at Contig_102:549537..558972- (Tribonema minus UTEX_B_3156 )
ATGCGCCGCGGCGCCGCTGCCGGCGTACGACTCCAGCTCTCCGTACAGCA
GCGCCGCGCGTGTGCACGACGCACTCTCCCGCCGTCCCCACCGCAGCATG
CATGCGCGTCCTCGCTGCGCGAGCATTGGAAGATTGGAGCGCTGCTGCCA
TTTGCCCCCAGCATTCACAGCGCCGCTGCTAGCCGGCTCGCTGTTGAGCG
GTGCCGCGCCTATACACCCTGCACCGCCCCCACGTCGCAGGCGCAGGCCG
CTCCAGATCGCAAAGTCTCCTTGAGCGTGTGCGCATGCCGCAAAGGTCTG
ACAGTCGGAGCGCCGCTGCGCCGTCTGCTGCTGCTTCGCTGCGCTCGCAG
ATGCGCCACGGCGCCGCTACTGGCGTGCTACACCGTCTCCTGAGCCGTGC
CACGCGCGTGTGCATGACGCACTCGCTCGCCGTTTCCAACATCGCAGCGT
ACTCCGCATGCGCGTCCCTGCCGCGAAGCATTTGACGATTGTTGCGCTGC
TGTTTCGCTGCGCTTGCAGGGGCGTCATGGCGCCGCTGCTGGCGCACTAC
ACGGGCTCGCTCTCAAGCCGCGACGTGTTAACGGCGCGGCTGCTGCGCCT
GTACCAGGACGCCGGCGCGCTGCCGCCGCGCGCCGCGGCGCTGCGCTGGG
CGTGCGCGGAGGACGAGGACGCGGTCGATGACGCTCAGCCGCCGCAGCAG
CAACCTAAGGTATGTTGGTATCAGGATTGACAATGGCTTCATACCTACCC
TGTGTGTATGTGCGCATACATGACCTCTGTGATAGTCCTGAACAGTGTGG
CGCTGTGCTGGGCGTGGGCGGAGGACGAGGACGCGGTCGCTGACGCTCAG
GCGCCGCTGCAACCCAAGGTTTGTTGGTATCAGTGTTGTTGGTGGCTCCG
TACCTACCCCATTGATGTAAAGTGTGCGCATACATGAGCTCGGTGACAGT
CCTAAACTGTGGAACACAGCGGGTAATGAGAATGACAGGCACGGAGAAGG
CGGCAGCGGCCAGCGCTGACGCGCGCGGGGAGCAACAAGGCTCCACTTGG
CCTCCCCAGCGAGGATCATTGCGGAGTGATTGGCCGTGGCGGCGACGCCG
GAGCACTGCCGCAACACCCAGCAGCGCTCACAAGCGTAGACCTAACCCTA
GATCTAACCTCACTGCGACCTGACCCCAACGGTGGCCCTGATCCCGGCCC
AATCGCCCCGGGCCTCGCACAGGCGCCGTGGCGCCACGGCAGGGGGGGGG
GGGGGGGGGGGGGGGCAGCACCTGCACATGCACTCCCTGCCGCCACCCCT
GGCTGAACCTAAATCTGAGCGTGTTGATCACAACGCTGCAGTGAGATGGC
GGCGCTGGCGCTGCATGCAGCAGCGCTCAACTTAGTGTGCACATCGCATC
GCTCGCCCTTTCCCCCCCAATCTTCGCCGGCGCCGTTGCACCACGGCAGA
CGGGGTGCGGCAGCACGTACGCCATTAACCTTATGGGTTCAAGATCCCAT
TTTTCGGGTGTTCGCCATCCAGCTACAAGCCCACGCTGCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCTCGACCCCCACCCTCCCAGGCGCCGT
GGCACCACGGCACGGCAGCACCGCCACCCTGACTGAGGCTACTCGTCCCA
CCCTCACACCAGTATTGCAGCGCTGTATGCAGCGCCGCCGCCGCAGGCAG
CAGTGCTCCACTGAACGCCCCCCCCCCCACCCCCTTCCCTCTCCTCCAAA
TCCTCGCAGGCGCCGCAGCACCACGGCAGACGGCACGGCAGCGCCTACGC
ACCGTGTTGATCCCAATGCCGCAGTGAGATTGCGGTGCTGCCACTGCATG
CAGAGTGCTCCACTAAACACACACACGCCCCCCCCCCCTTCCAACCCCCC
CCCCTCCTGCAGGTGCCATGGCACCACGGCAGGCGGCACGGCAGCGCCTA
CGCGCGCGGCCCTCCGCCGCCCCCCTGGCTGTCGGAACCGTCCATCGCGC
GGCGGTTCCGCGCCAGCATAGGCGCATTTCCGCTGCGGCGGCCACTGGAG
CCGCCGCCGCTGCCGTTTGAGCCTGCGTTCGAGCAAATGGGGGGCGAGGG
CGGGCGCGAAGGAGCGCCGGGGAGCGGCAATGGTGATGTTCAACTTGAAG
ATGATGGGGATGCGATGAGCGTTGACGGTGAGCTGGAGTGGCCACGGCGG
AGTCGAGTGAGTCAGGGATTGAGTCGAGTCGTAGCACGCGGCTGTCAAAG
CCTGAACCACTTTGGGATGCTGTGATCTAATGGCGACTTAGGGATAAGGT
TAGCTTAATCGTGCCCACCGTCATCCTTTGCCTATACTTAGGACTTGGCA
CTCCAAACCGTTTCTTTCATGCGTGACGCGCACACATTTGCGTCACTCTG
CGGTCATCTCTGTTGCTGTTACTGGCAGGCGTGACTGGGGCTGATGCAGG
CAGCAAGGGCACCGACGCAGATTAGCAGGAGTGAGTCTGAATCTGAGTCA
GCATCGCTGTGCAACTTGCTGAATGTGCCTCAGTGCTCGGAAGTGCAGCA
CCCAGCTCAAGCTCACACTCAGTCACCTCCACACTCCACATGACAGCCTT
CGTTGCAGTCATTACATCCAGCAGTGGGTAGAGTGGGTGCTAGCCATCCG
GAAATTGTGTTGCTCGCAGCAGACGGCGAGGCTGACGCGATCAACGAGTC
TGAATCAGACTCAGAGGCTACGCTCGACTCGACGTAAATACTGCACTGCT
CTCAAGCGCTGCAGCGCTTCCTCCTGAATCAGACGCACAACTGCATTCCT
TTCTCGTGCCATCACTCGCAGGCGACGACGCGGCTGACGCCGCCAGCGAG
GGCACCGACGCAGAGGGCGGCCAGTCTGAGTCAGACTCAGAGTCACCGCT
TAACTCGATGTAAGCACTGCACCACCCTCGAGCGCAGCTGTGCTTCCTCA
AACTGACGCACAACTGCATTCCTTTCCCGTGCCATCACTCGCAGGCGACG
ACGCAGCGGATGCGGCCAGCGACGGGACCGACGCGGAGGGCGGCCAGTCT
GAGTCAGAGTCAGAGTCACCGCGCAGCGAGATGGAAATGCAGCAGTGCTC
GGCAGCTGCGGACGCCGCGGCGGCGCACGAGGTGCTGGACCCCGCGTTTG
TGCTGCCGCTGCTGGATGATGCGCTGTCAACTGCGGGGTGCGCCGTCGCG
AGACAGGTGAGCTCAATTACTGTACTTTTCCATGAAAATTCTCGCGAAGG
GCGCGAAAATTGGCTTTTGAGGTGCTTCGATCGAAGTATGTGTGCTTGCA
GGTATACCTCACAACGTGCCTACACTCGTCAGTTGTGTTGTGAAGGCTAT
GTGAGGCGTGTGTTGTGCGTGTGCTGCCGTTGCTGGACGATGCGCTGTCG
ACTGCAGGGTGCGCCGACGCGAGACAGGTCAGCTGTGCTCATGTACTGCT
TAATTGAGTCTCACTTCAGGGCGTGAAACAGCTTAGGGTTAGGGTTAGGT
AACCCTGACCTTAACCCTAACCCTGGTACATAGGCTCCCAAGTATATCCA
CCTGGCTACCAGCACCCACACATGTGTCCTGCGAACACTTAACAGACAGT
GCTCAAAGTACATGTACCTGGGGGTGGTATACCTCACAAAGCGCTTGCAC
TCATGAGGTGTGCGTGTTGTTGCTATGTGAGGTGTGTAGCGTGTGTCAGC
GCGTTGTGCGGTGTGGTGTGTGTGATGTGTGCATGTTTGTGTGTGTGTAT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTTTGCCAACACTCATTTGCTGGCAGCGTGCT
CGCACACTGCCCTCCATCAAAGACACGCAGATACCTCGTCATCACGAGCA
CGGCCAGACAGTGCAGTTGCCGACCGGCTGGTGCTCGCTGCCACTGGAAT
CTATTACATACCTGCCCCCCATTTTGAGTCAGGGGTACTCGCCTACTACT
TCTCGTTCTGTGCAGTACCTACTACCGCTGATGCTCACTGCCACCCATCA
CTTACATACATACCTGTCCCCCAGGTGTGCGAGCCGGGGGCGCTCGCGTA
CTGCCTGCGAGCCTACACCGCTGCACGCGGACCTTCGCATCAAGCGTCAT
GAGCATGCCAGCGCATTAAACTACTTGGAAGTATACCGTTGCGAGGATAA
GTACCAGTGCCATCCATACTTACAACCCCCCCCCCCATGGTGTGCGAGTC
GGGGGCGCTAGCGTACGGCTGTATTATCGATAAATGATGTGCCGCATTAC
GCACCGGCTGATGCTCGCTGCCAACCACTTTGAAAAGATACCTGCCCCCC
CCCCCAACCCCCCCCCAGGTGGGCGAGTCGGGGGCGCTAGCGTACTGCCT
CGCGGCGACGGCGAGCCTGCACCGCTCCACACGAACATCCAATCTATCAT
CATGAGCTTGACAGCGCAACATACTCTACTTTTTGATGTCACACTGTACC
TGAAGCTGATGCTCACGGCCACCCATACTAACATACCTGCCCCCCAGGTG
TGCGAGTCGGGGGCGCTCGCGTACTGCTGTTTCATTATGCCGCAGTACGC
ACCGGCTGATGCTCTCTGACCCATACTTATATGCATACCTTGCCCCCCCC
CCCCTCCCCCAGGTGTGCGAGTCGGGGGCGCTTGCGTACTGCCTTGCGGC
GACGGCGAGCCTGCGCGCCTGCACGCGCGCCGCCGCGCTCGCGTGCCTGC
AGCGGCTGCTGAGCGTTGTGGAGGGCGACGCGTGCGCCGCGGACACGGCC
TTCAAGCAGCGACCGCAGGCAAGTTTGGGGCGCACACGTCTGCGCTGTGC
TGCGCGTGCGTTCGGCGCGTTCGACAGTCAGCACAGGGGCATCTATGCTA
CAGCACTGCGGCGAAAGGCCGTTGTGTCGTCAGGGACCCATGGTGTCAGC
TGAAGTTGACAGTGTGCCGATATCTGACTCGCGGCCGTACTACATGTTGT
CCCGCCGAACTCCCCCCTCGGGAGAGTTCTTTGTCTTGCACTGGACCACA
ACATTGAAGTGGCTTGGTGCCGCCGCTGCTGCTGCTGCTACTGCGGCCCT
AGCTGCGCTGCTGCAGCACCACCTGCTCCCTGTCGCCCTCCGCCAACCCT
GCTGCTGCCGCCGCCGCTGCTGCTGCTGCCACCGCTGCTGCCACCGCTGC
CGCCGCTGCTGCCGCTGCTGCTGCCGCGGCCGCCGCTGCTGCTGCTGCTC
ACTGCCACCGTCTGCCCGCGCCGTGTCCCCTGCGCGCAGCTGCTGCTGCT
GCTGCGCAGCCTGCGCGACGGCGTCACGGACCCTTCCGCGCGCGTTCCGA
CGCTCGTCGCCGTGTCGTTGGCGCACGCCGCCGATGTTCTGGCGTCCACG
CCCGCGCACGACGCATACGTAGCCATCAACAGGTGAGCTGAGCGCTGTGT
GGTCTGGCTTCACATCAAGTTGAAGTGTCTGGTCGTGAGGTGTACTTCAA
CACCAGCTTGAAGTATCTGCGGTGCTGGCGGCCGCGTGCGTGATAATTGA
CAGGTGAGCTGAGTGCTGCTGTGTATCGTCTGATTTCACTGCAAGTTGAA
GTATATGAGGCCGTGCCGACGACACTGGCGTCCGCGCCCGCGCACGACGC
GTGTGTACCATCAAGAGGCATGCGTGGACTGCAGTGTTTGGTGGTACGCT
TCAACGTCAACTTCAAAGCAGTTGCAGTAGTGGCTTATCATGTGAATCGG
GCAATGGCACATTATGGCAGTCAACGCACTAGAGACATACAGGACCTGTC
CCTGGGGCATTTACGGTATAAGCATTGCAAAATAAAGGTAAAAACAAAAA
TCAGGCTCTGGGTCAGGGCCCAACAGAGAGCCCTTGCCAGGAGCCTATCA
TCAAGCACCTGCTTCATGCTGCTACATCTGTACCAGCACGTCATCAACGG
AAGCTGCTGCAATGCTCATACGCCATTGCCATCCCCCCCCCCCCCCCCAT
TTTTCAGGTTTCTGCTCCGCCGGCCGAACATCAAGATGAATGAAGTTCCA
TTCTTCACCACCCTAGTGTCAGGGTCTAGCAGCAGCGCCGCTTCCGCTGC
CGGCGCCGCCGCCGCTGCGGCCGCCGCCGCCGCTGCTGCGAGCTCTTACG
GCGCCGGTGGCGCCGGCGCAGCTGCAGCGCGCGCATGCAACTGGGTGAGT
GTATGTTCACAATGTATGGCTGCATTGTCTTCACGGCATGAAAGTACATT
GGAAATAGTACATTACAGTTACAATGCTCACTTTTTCCAAGGTTGTACGG
TACAACCTCTCGGCTGCATGCTTTGACAAGACCTGTTCAACAGGGGGTAG
ACCGTGCTTTGGGTTACGCCTGCCGCTGCCGCTGCCGCCGCCGCCGCCGT
CGCCACCGCCGCTGCCGCGGCGGGTGCAGCAGACTTGCGCAGCCAGCAAA
CACGAAGTGCAGGTTGTCCGCTGTGATTGCTGTGCGCGCTGCCGGCTGCA
CATACGATGCATCTAGACAATCCACAATGAGTTGCTCCAGTGCTGTCGAT
CGCAGCAGCTGCTGCATGTGCAACTTGTGCGTCAGCCAGGAGTTCCACGG
CAGGCGCGCTCGCGTACATGCCGCGGTCCCTCGAAAATACATGCTTCCGC
ACATTCACGCGCGCGGCAACCGTCACCTAACCCTCACCCTAGCGCAGCCC
CAGCACTAGCCCTAGCCCTACCTAGAATCACTGCGTGACGTTAGCCGTGT
GCCGGCGAACGGCTCACCGGGGCAGGAAACGGGTGCCGCAGAGCGCGCTG
CGCCCTAACATATCTAGACACATTGCCAAAGAGTGCTGGACGGGACTTTC
ACGGATGTAACCCCCCCCCCCCCCCCATACACACGCATGCCAAGGAAGAG
TATTATACGATCATACACGAAGCGGAAACATGGAAGCGCTTCGTCGTACG
CGCACACAGTGCGAACCCGGAAATCGCATCCACGACACGACGCTGCCGCC
GCCGCCGCGCGCCGCAGGCGTTGCGCCTTCTGCGCGACGGCGTGCGCACC
GGCCAGGACCTCGGCACGGCCGCGCGCGCGCACGCAGCGCCGCTGCTGCT
GCTGCTGCTGGACGCCGCCGACGGCGCGGCGACGCGCGGCGCGGCGCTGG
AGGCGCTGGCGGCGGTGGCGCGGCTGCGGCGCGGCGGCGCGCGCTACCTG
CTGCGCCGCGCCGGCGTCGTCGCGTGGGCGCGGCTCGCGCTGTCGCGCGC
GGCGGCGCCGGCGGCGGACGCAAGGTATGAAGTAGGGTTTCTGTGGCGCT
CTTCGAGGTCAGTGAAGGCTGGGGTCAGGGTCGTGCTGTTTGTATTGTGC
CAGAGCTCTGAGGCGATGGGGGGCATGCATGCAAGGTGTGTTTCCTAGAA
CCTGCTCTGTGGTACGCTGTCCATCGCTCCGCTCGGCTGTGCTTCACTGC
TGTCTTGAGGCAAGGTGCTTCAGGCGAACAGCTGGCTGCTGCAAACGGCA
AGAACTTCCGCCACACTTCATAGATTTTTCTGCATGATTGACAGACTTGT
GGCGAAACTCTAGAATGTGGAGCCTTTGGCAGCCACATACCTGTTGTAGG
TATGAATGCAGGAGCCAATTGCTATACCGATCCGAAAGCTTTCCACTGCG
TGTCACCCCCCCCCCCCCCCCCCTCCCTTCGCCAATTCAAACCAATTGCG
GAAGCGCTTCACAGGCCTCCCCCTGTGCACACCCCCCCCCCCCCCCCCGT
GCCCGCTGCAGACCGCACATGTATCGACGCCAGGCAGGCGTCGCCGCCAC
CGCCGCGTCGCTGGCGGCGCTGCTGCGCCTGCTGCGCGACCTGCTGTCCG
CAGGACTGCAGCTGCGCGTGCCGCTGCTGCCGGAAGAGTACGCCCTGCTG
GCGCCGGAGGTGGCGGCGGCGGCGGCAGCGGCGGCGGCGGCGTGGCTCCC
GCAGCTATCCGCCTCGCCCTCCGGCGAGCACGATGACGATGCTGAGGCGC
CTGCGTCAACAGCGGTGGCGGATGTCACTGCTGAAGTGCAGCAGGAGCCG
CAGGCGGTGGTGGCAGCGCTCGAATTGCTCGCTGACACGGCGGCTGCGGC
GGCGGCGGAGGGGCGGCCGGGGCTGCTGCTGCCAGTGTCAACGGCTCAGC
AGCTGCTGCTGGCGGCGCAGCGCGTCGCGCCGGCGGCGCCCGCAGCCATC
GCGGCTGTTCGGCGCTTGCTGTGCACTCAGGGCGCCGTTCGGCATGTAGG
GTCACGCTTGGATGCAGGGTTAAAGGCAGGGTTAAGGCAAGAGCATACAA
CCAGCGAGGCACTGTCACCAACAGTGGATTTGGATGGTGCTGCTGACAAC
CTGCAACAAGGGTCAAAGCTAGACCACGCTGCCGATACCGCGTCAGCGTG
TGCCGCCGTTGCCGTGCTGCGCTGGTGCGCAGCGCAAGCGGCGCAGTTGT
CGGCGGCGCAGGCGGCGGCGGTGCTGCGGCTCGCTGCTGCCGTCTCCGCA
GACGACGAGGTCACGCACGCGCTCGCCGCAGACCGTCGCCTGCTGTGCGC
GTTGCTCGCGCTGCCGAGCGCTGTCACCTCACACGCGCGCAACTGCGAAG
CCGCTGCGGCGGCAGCGCCGGCTGCCGCAGCGAAGACGGCGGCTGCGGCG
GCGGTGCTGCTGCCGCTGCTCGCGGCGACCGTCGTCGCTTCCATCGTAGC
GACCGCGTCACCGCCTCAGCAGGAGGCAAACAGCGTTCGCGTGCAGGTGG
CACACGCGCTGCTGCAAGCGCTGCCGCCGCCGCCCGTAGCCGCTGCGGCC
GCTGCCGCCGATGCTGTGCGCGACGGCGACGGCGACAACGGCGATGGCAG
CGCGCGGTGGGCGGCGCGCATGGCGTGCACGGCGCTGCAGCGGCTGCTGC
TCAGTCCGAGCGCAGACTGTTCTGATGTAGCGCGTGCGGTCCCCCCGGGA
CTGTGCGACGATGCCACGGTGCAGCGCATCGTCGCGGCACTACGCCCAGT
TTGCGGCAGCGGCTTCGGCGACAGGTCGAGTGCGGGAGGCGATGGTGTGA
AGCGCAAGAAGAGGCATGGCGACGGCGGCGGCGACGGAAGCCATCAAGTC
GGCATCAAGCGGAAAAGTGGCAGTAAGAGTGTTGCTGCAGTGCCCGCCAC
CGCTGTGAAGGCAGCAGTGCCCAGCAAGCGCAAGCGCCGCAAGAGCAGCT
GAATGCCGGCCGCAGCGGCATGGCCTGAAGTAATGACGGCAGCGACACAA
ACACCGTCCAATTGACTTTGAGCTCATTGTCGCCAGTGGCGACACACTTT
ATGCAGCTGTTGTGTGCATGCGCAACCCATGTTGGGCTGCACGCAACGAC
ATGGGCTGCTGCAGCGTCCGGTGCCCCTCTTACCTGCGCCAGTGTGCGGA
TTTTCTCATGTCAATTTTTAAGCAAATTTAGGTTGC

Coding sequence (CDS) from alignment at Contig_102:549537..558972-

>mRNA_11857 ID=mRNA_11857|Name=jgi.p|Trimin1|351914|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2955bp|location=Sequence derived from alignment at Contig_102:549537..558972- (Tribonema minus UTEX_B_3156 )
ATGCGCCGCGGCGCCGCTGCCGGCATGCGCCACGGCGCCGCTACTGGCGT
GCTACACCGTCTCCTGAGCCGTGCCACGCGCGTGTGCATGACGCACTCGC
TCGCCGTTTCCAACATCGCAGCGGGCGTCATGGCGCCGCTGCTGGCGCAC
TACACGGGCTCGCTCTCAAGCCGCGACGTGTTAACGGCGCGGCTGCTGCG
CCTGTACCAGGACGCCGGCGCGCTGCCGCCGCGCGCCGCGGCGCTGCGCT
GGGCGTGCGCGGAGGACGAGGACGCGGTCGATGACGCTCAGCCGCCGCAG
CAGCAACCTAAGGACGAGGACGCGGTCGCTGACGCTCAGGCGCCGCTGCA
ACCCAAGGTGCCATGGCACCACGGCAGGCGGCACGGCAGCGCCTACGCGC
GCGGCCCTCCGCCGCCCCCCTGGCTGTCGGAACCGTCCATCGCGCGGCGG
TTCCGCGCCAGCATAGGCGCATTTCCGCTGCGGCGGCCACTGGAGCCGCC
GCCGCTGCCGTTTGAGCCTGCGTTCGAGCAAATGGGGGGCGAGGGCGGGC
GCGAAGGAGCGCCGGGGAGCGGCAATGGTGATGTTCAACTTGAAGATGAT
GGGGATGCGATGAGCGTTGACGGCGACGACGCAGCGGATGCGGCCAGCGA
CGGGACCGACGCGGAGGGCGGCCAGTCTGAGTCAGAGTCAGAGTCACCGC
GCAGCGAGATGGAAATGCAGCAGTGCTCGGCAGCTGCGGACGCCGCGGCG
GCGCACGAGGTGCTGGACCCCGCGTTTGTGCTGCCGCTGCTGGATGATGC
GCTGTCAACTGCGGGGTGCGCCGTCGCGAGACAGGTGTGCGAGTCGGGGG
CGCTTGCGTACTGCCTTGCGGCGACGGCGAGCCTGCGCGCCTGCACGCGC
GCCGCCGCGCTCGCGTGCCTGCAGCGGCTGCTGAGCGTTGTGGAGGGCGA
CGCGTGCGCCGCGGACACGGCCTTCAAGCAGCGACCGCAGGCAACACCAC
CTGCTCCCTGTCGCCCTCCGCCAACCCTGCTGCTGCCGCCGCCGCTGCTG
CTGCTGCCACCGCTGCTGCCACCGCTGCCGCCGCTGCTGCCGCTGCTGCT
GCCGCGGCCGCCGCTGCTGCTGCTGCTCACTGCCACCGTCTGCCCGCGCC
GTGTCCCCTGCGCGCAGCTGCTGCTGCTGCTGCGCAGCCTGCGCGACGGC
GTCACGGACCCTTCCGCGCGCGTTCCGACGCTCGTCGCCGTGTCGTTGGC
GCACGCCGCCGATGTTCTGGCGTCCACGCCCGCGCACGACGCATACGTAG
CCATCAACAGGTTTCTGCTCCGCCGGCCGAACATCAAGATGAATGAAGTT
CCATTCTTCACCACCCTAGTGTCAGGGTCTAGCAGCAGCGCCGCTTCCGC
TGCCGGCGCCGCCGCCGCTGCGGCCGCCGCCGCCGCTGCTGCGAGCTCTT
ACGGCGCCGGTGGCGCCGGCGCAGCTGCAGCGCGCGCATGCAACTGGGCG
TTGCGCCTTCTGCGCGACGGCGTGCGCACCGGCCAGGACCTCGGCACGGC
CGCGCGCGCGCACGCAGCGCCGCTGCTGCTGCTGCTGCTGGACGCCGCCG
ACGGCGCGGCGACGCGCGGCGCGGCGCTGGAGGCGCTGGCGGCGGTGGCG
CGGCTGCGGCGCGGCGGCGCGCGCTACCTGCTGCGCCGCGCCGGCGTCGT
CGCGTGGGCGCGGCTCGCGCTGTCGCGCGCGGCGGCGCCGGCGGCGGACG
CAAGACCGCACATGTATCGACGCCAGGCAGGCGTCGCCGCCACCGCCGCG
TCGCTGGCGGCGCTGCTGCGCCTGCTGCGCGACCTGCTGTCCGCAGGACT
GCAGCTGCGCGTGCCGCTGCTGCCGGAAGAGTACGCCCTGCTGGCGCCGG
AGGTGGCGGCGGCGGCGGCAGCGGCGGCGGCGGCGTGGCTCCCGCAGCTA
TCCGCCTCGCCCTCCGGCGAGCACGATGACGATGCTGAGGCGCCTGCGTC
AACAGCGGTGGCGGATGTCACTGCTGAAGTGCAGCAGGAGCCGCAGGCGG
TGGTGGCAGCGCTCGAATTGCTCGCTGACACGGCGGCTGCGGCGGCGGCG
GAGGGGCGGCCGGGGCTGCTGCTGCCAGTGTCAACGGCTCAGCAGCTGCT
GCTGGCGGCGCAGCGCGTCGCGCCGGCGGCGCCCGCAGCCATCGCGGCTT
TGTCGGCGGCGCAGGCGGCGGCGGTGCTGCGGCTCGCTGCTGCCGTCTCC
GCAGACGACGAGGTCACGCACGCGCTCGCCGCAGACCGTCGCCTGCTGTG
CGCGTTGCTCGCGCTGCCGAGCGCTGTCACCTCACACGCGCGCAACTGCG
AAGCCGCTGCGGCGGCAGCGCCGGCTGCCGCAGCGAAGACGGCGGCTGCG
GCGGCGGTGCTGCTGCCGCTGCTCGCGGCGACCGTCGTCGCTTCCATCGT
AGCGACCGCGTCACCGCCTCAGCAGGAGGCAAACAGCGTTCGCGTGCAGG
TGGCACACGCGCTGCTGCAAGCGCTGCCGCCGCCGCCCGTAGCCGCTGCG
GCCGCTGCCGCCGATGCTGTGCGCGACGGCGACGGCGACAACGGCGATGG
CAGCGCGCGGTGGGCGGCGCGCATGGCGTGCACGGCGCTGCAGCGGCTGC
TGCTCAGTCCGAGCGCAGACTGTTCTGATGTAGCGCGTGCGGTCCCCCCG
GGACTGTGCGACGATGCCACGGTGCAGCGCATCGTCGCGGCACTACGCCC
AGTTTGCGGCAGCGGCTTCGGCGACAGGTCGAGTGCGGGAGGCGATGGTG
TGAAGCGCAAGAAGAGGCATGGCGACGGCGGCGGCGACGGAAGCCATCAA
GTCGGCATCAAGCGGAAAAGTGGCAGTAAGAGTGTTGCTGCAGTGCCCGC
CACCGCTGTGAAGGCAGCAGTGCCCAGCAAGCGCAAGCGCCGCAAGAGCA
GCTGA