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Homology
BLAST of jgi.p|Trimin1|173474 vs. uniprot
Match: A0A835ZG95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG95_9STRA) HSP 1 Score: 454 bits (1167), Expect = 1.060e-155 Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 1
Query: 1 MWHAGHRSGVGAVLRRSRAPIEQHASAVYTSKKQPLSGVRRDSGVGTGASAAADATADGAPGSDGALYAYVGGFAYGARDGAGVMVDGVKGESYEGEFREGRVTGVGRLTCANGDVWEGAFERGAPRGLVFFARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLLAAGASHYVGQXXXXVKHGYGRYVFRCGDVYDGDFADDKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEPYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFAFARRHGRGRHTWPDGVYYDGGFADGMAQGEGELVCRPPAGWEWGHRYRGLWHQNRSAPASCS 1206
MWHAGHRSGVGAVLRRSRAPIEQHASAVYTSKKQPLSGVRRDSGVGTGASAAADATADGAPGSDGALYAYVGGFAYGARDGAGVMVDGVKGESYEGEFREGRVTGVGRLTCANGDVWEGAFERGAPRGLVFFARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLLAAGASHYVGQXXXXVKHGYGRYVFRCGDVYDGDFADDKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEPYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFAFARRHGRGRHTWPDGVYYDGGFADGMAQGEGELVCRPPAGWEWGHRYRGLWHQNRSAPASCS
Sbjct: 1 MWHAGHRSGVGAVLRRSRAPIEQHASAVYTSKKQPLSGVRRDSGVGTGASAAADATADGAPGSDGALYAYVGGFAYGARDGAGVMVDGVKGESYEGEFREGRVTGVGRLTCANGDVWEGAFERGAPRGLVFFARKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLLAAGASHYVGQXXXXVKHGYGRYVFRCGDVYDGDFADDKARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEPYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFAFARRHGRGRHTWPDGVYYDGGFADGMAQGEGELVCRPPAGWEWGHRYRGLWHQNRSAPASCS 402
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | Trimin1|173474|e_gw1.102.79.1 |
Hectar predicted targeting category | mitochondrion |
Ec32 ortholog description | MORN motif |
Ec32 ortholog | Ec-15_001020.1 |
TranscriptId | 173796 |
Track | FilteredModels1 |
ProteinId | 173474 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11851 ID=mRNA_11851|Name=jgi.p|Trimin1|173474|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1209bp|location=Sequence derived from alignment at Contig_102:515214..520011- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.
ATGTGGCACGCAGGGCATCGCTCAGGAGTCGGCGCTGTTCTGCGCCGGTC GCGCGCCCCTATCGAGCAGCACGCTTCAGCTGTCTACACATCAAAGAAGC AGCCGCTTTCGGGGGTTCGGAGGGACTCGGGCGTTGGCACCGGGGCGAGC GCTGCTGCAGATGCCACTGCCGATGGCGCCCCTGGTTCTGACGGCGCGCT GTATGCATATGTCGGGGGTTTTGCCTACGGCGCGCGCGACGGGGCGGGCG TGATGGTTGACGGCGTCAAGGGGGAGTCGTACGAGGGGGAGTTCAGGGAG GGGAGAGTCACAGGCGTGGGGCGGCTGACGTGCGCCAACGGGGACGTCTG GGAGGGGGCGTTCGAGAGGGGGGCGCCGCGGGGGCTCGTGTTCTTCGCGC GCAAGAACGGCGACGAGTACTTCGGGCACGTGCAGGAGGGCCGCGCGCAC GGCATCGGCGTCCTCGCCCTCGCGCGTGGCGAGACGTACCGCGGCGAGTT CGTGCGCGACAGGCGCTGCGGCCGCGGCGCGTGCATCTACCCTGACGGCG CGCGCTACTGCGGCGGCTGGCTGCGCGATCAGCCGCACGGTTTCGGCGTG CTGCTGCTGGCAGCAGGTGCGTCGCATTATGTGGGCCAGTGGCGCCGCGG CGTCAAACATGGCTACGGGCGCTATGTGTTCCGCTGCGGCGACGTCTACG ACGGCGACTTTGCGGACGACAAGGCGCGCGGCACAGGAGTGTACAGCGCC GAGACGGGGGAGATCTACTGCGGGGGCTGGCGTGACAACCGCCGCAGCGG CAAAGGCGAGCTCACCTGGCCCTCGGGGGCACGCTATGAGGGCGCATGGC TCAACGGCCTGCCACACGGCTCAGGCACCATGCGCTACGCCAACGGCGAG CACTACGCCGGTGAGCCTTATTCGGGGGTGCGCTACGAGGGGGCATGGCT CAGCGGCCTGCCACACGGCTCAGGCACCATGCGTTACGCCAACGGCGAGC ACTGCGCTGGCGAATTTGCATTCGCGCGCCGCCACGGCCGCGGCCGCCAC ACATGGCCAGACGGCGTGTACTATGATGGCGGTTTTGCCGATGGCATGGC GCAGGGGGAGGGGGAGCTCGTGTGCAGACCCCCCGCAGGGTGGGAGTGGG GGCACCGGTATCGCGGACTGTGGCACCAAAATAGGTCAGCGCCTGCTTCT TGCAGCTGA back to topprotein sequence of jgi.p|Trimin1|173474 >Trimin1|173474|e_gw1.102.79.1 ID=Trimin1|173474|e_gw1.102.79.1|Name=jgi.p|Trimin1|173474|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=403bp
MWHAGHRSGVGAVLRRSRAPIEQHASAVYTSKKQPLSGVRRDSGVGTGAS AAADATADGAPGSDGALYAYVGGFAYGARDGAGVMVDGVKGESYEGEFRE GRVTGVGRLTCANGDVWEGAFERGAPRGLVFFARKNGDEYFGHVQEGRAH GIGVLALARGETYRGEFVRDRRCGRGACIYPDGARYCGGWLRDQPHGFGV LLLAAGASHYVGQWRRGVKHGYGRYVFRCGDVYDGDFADDKARGTGVYSA ETGEIYCGGWRDNRRSGKGELTWPSGARYEGAWLNGLPHGSGTMRYANGE HYAGEPYSGVRYEGAWLSGLPHGSGTMRYANGEHCAGEFAFARRHGRGRH TWPDGVYYDGGFADGMAQGEGELVCRPPAGWEWGHRYRGLWHQNRSAPAS CS* back to topmRNA from alignment at Contig_102:515214..520011- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11851 ID=mRNA_11851|Name=jgi.p|Trimin1|173474|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4798bp|location=Sequence derived from alignment at Contig_102:515214..520011- (Tribonema minus UTEX_B_3156 ) ATGTGGCACGCAGGGCATCGCTCAGGAGTCGGCGCTGTTCTGCGCCGGTC
GCGCGCCCCTATCGAGCAGCACGCTTCAGCTGTCTACACATCAAAGAAGC
AGCCGCTTTCGGGGGTTCGGAGGGACTCGGGCGTTGGCACCGGGGCGAGC
GCTGCTGCAGATGCCACTGCCGATGGCGCCCCTGGTTCTGACGGCGCGCT
GTATGCATATGTCGGGGGTTTTGCCTACGGCGCGCGCGACGGGGCGGGCG
TGATGGTTGACGGCGTCAAGGGGGAGTCGTACGAGGGGGAGTTCAGGGAG
GGGAGAGTCACAGGCGTGGGGCGGCTGACGTGCGCCAACGGGGACGTCTG
GGAGGGGGCGTTCGAGAGGGGGGCGCCGCGGGGGCTCGTGTTCTTCGCGC
GCAAGAACGGCGACGAGTACTTCGGGCACGTGCAGGTGAGCGCTGCTGCG
CTGAGGCGGCGCTGCAGTAGCTGTGCTTTTTCTCCTGTGACAATGGATCT
CAATGCAGTTGAAGTGGGCTGTCCACCTTCCCCATGTATGATTGGTCACG
TTGCGATCGGCCGCATTACAATGAGAAGCGAGATTCTGTTCCTGATCTCT
AAAAAGCCGCATATAATACCACTGGCTCACTTCCCTACTCACGTCATCAT
CGATACGCATATCACGAGCCACCGAGGCTGGCGGCAGCAGGCGGTGCATA
TACTGTACTTTGAAGTACCTCGGTGTACCCATTGGGGGTACCAATTCTAG
CAGTGTTCAGAATATCATGTACCAACATGCTGTATATTTGCACTTGTCAA
GAACATACATTTCCTCTTTGGCGCCTATGCGAGCATCGCCATTCCTGATG
CACCCTCGCAGGAAGGGCGCACGCACGGCGTCGGCGTCCTTGCCTGGTGC
GCGGCGAGACTCACCACGGCGAGTTTGGTCACAAAGGCGCTGCAGCGACT
CATCGCAAACTGCCTTTACAATCTACAAGTCACGAGTGGCAGTGACGATG
TACACTCACTGGAAAAGTAAATGTATATACGCTGAAGTGCGCCATACTAT
GTGTAGTATCGACACACACACACCATCCCTGTTCTGCGCGCCAGTGCCGT
CAGTGCTTGTAGCATAGTAGCCACTGTCGTGCACCCAAAACGCACGATTC
TTCTTCTGTCTAAACCATGCCACCGTCGATTCACCACTGCAGGAGGGCCG
CGCGCACGGCATCGGCGTCCTCGCCCTCGCGCGTGGCGAGACGTACCGCG
GCGAGTTCGTGCGCGACAGGCGCTGCGGCCGCGGCGCGTGCATCTACCCT
GACGGCGCGCGCTACTGCGGCGGCTGGCTGCGCGATCAGCCGCACGGTTT
CGGCGTGCTGCTGCTGGCAGCAGGTGCGTCGCATGTTGAAGTCGCTGTAG
TGTAAACTTTAACTTGCTTGGCCTCTACACTGACGGCTAATGCGGCGGCT
GGCTGCGCGATCAGCCGCACAGCTTCGGCGTGCTGCTGCTGGCTGGAGGT
GAGTCACAGGTTGAAGTCATTGTGAACTTTAAGTTGTGTTTGTCTGCCCC
GATGGCGCGCGCTACTGCAATGGCTGGCTACGCGACCAGCCGCACGGGTT
CCGCGTACTGCTGCTGGCAGGAGACAAGTCGCACGTTGAAGTCGGTGTGA
GCTTCAAGTTGCTTGACCTCTAATTGATGGCACCCACGACCAGCCCCACG
GGTTTGGCGTGCTGCTGCTGGCTGGAGGTGAGTTTTAAGTTGAGCTTACT
GTAATCTTCATGTTACTTGGCATCTATTCGACGGCGCGCGGTATTGCGGC
GACTCGCTGCGCCACCAGCCGCATGGCTTCGGCGTGCTGCTGCTGGTAGG
AGGTGAGTCGTATGTTGAGGTCATTGTGAACTTCAAGTTGCTTGGCCGCT
GTCCCAACGGCGCAGGCCGTTGTCCCAACGGCGAAGGTACTGCGCGGCGG
TGGATTGCGTGACCAACCCCACGGGGTCGGCGTGCTGCTGCTGGCAGCAG
GTGAGTGGTTTGTTTGTGAATGGTTGTATAAGCTTCAAGTTGCTTGGCCT
CTACTTTGGCGGCGTACGCTACTGCAGCGGCTGGCTGCGCAAGCAGCGCT
GCCGATTTGGCTGGCGGAAGGTGAATTGTGTGTTGCGTCAACTTCTTGCG
CCCGTGGCATGTTATCAAAAAAGGGTATCTTACATGCTATTTGTGCAAGA
GTGCCGCTGTGTCTGACATCACCATCTTGCACGCTCACCTCAATGCACTC
AAAGAAGGCGTCATTACCCCTGTACGTCTCCCACACATAGACGATCATCG
ATTCAAATTGGTGAGCTTCAAGCTGATTGGCATGCTGATCTTCCTGCCTT
TTGTGCTGGGCCGTGTGGTCCGGGTGGTACGTCACTTAAAGTTGAAGTGT
AACATTTTGTCCCGTTGTGACACCACATACGGAGCAAGTGCACTGCAAAA
TGATACTGTTCTCAAAAAGTGCCACAGTGTAGACTGTGTCCTGCAATCAA
AGGTATCTCACTTGAGAGGCAGCAGCAGCTCCCAACTAGTCAGAACCTCA
AAAGCAAGTACAAAACGGGGGGTTGCCTTGTACCACCAACCCCAAGATTG
GGATTCAAAGAATTGCGGACAACAAATTCTGTAGTATTGCCCCCCCTACG
CCCCCCCCCCCCCCCCGTGCTTACATGACATCTTGAAAGAATGCCCCGCG
CCTTCCATTTTGACACCCGTAGACACAAATTTATCAAAATTCTTTGCATC
TGCATGCCAATTCAAGTCTGGCTTGAACTGGAAGCATCAAATTTTGGTTT
ACTGCTTATTTGCGCGCACTCGTCAGGGGACAAGTATGTGGGCCAGTGGC
GCCGCGGCGTCAAACATGGCTACGGGCGCTATGTGTTCCGCTGCGGCGAC
GTCTACGACGGCGACTTTGCGGACGACAAGGCGCGCGGCACAGGAGTGTA
CAGGTAATCCTAACCCTGACCCTGAACCCCTGACCCTATCCCTAACCCCA
GCCTAAACAATGCCCTAAGGACGACAAGGCGCGCAGCACAGGTGTGTACA
GGTGATGCTGGTCTAATCAGCCTCTCCAGAATGCAGTCAATAATGAGGCA
CTATGTTACATGAGGCGAAGGCACACATAGGGCTGCTGGTCAGTGCAATA
TCACATGATGATACATAGCAAATACTGTGACTGAGCTTGCACAACCAAAG
ACAAAACACCCGCTGAGCAGATCTGGACGGGCACATCAGTGCTCAGCATG
ACGGTGATACCGTGATAGATTAGCCTCTTCAAGGTTGCAGGTTGAACGCT
CCTGAGAGACACACGAAGTTGCATGCTTGCCCGCACGAGTCCTGCCTATA
CAGATTCCACCAATACACGCACCCAACCACCGTCGTGACGACAAGCAGAA
ACAAGGCGCAGAGATCTTGATGTGGTGTAAAGCTCAGTTTAGATTGACAA
AAATGCCAATAGAAGCCCCCCACATTTTTCCTCAACGATTTTTTTATACC
CCCACTTGTTCAACCACTCCGCTCGCAGGAGCGCCGAGACGGGGGAGATC
TACTGCGGGGGCTGGCGTGACAACCGCCGCAGCGGCAAAGGCGAGCTCAC
CTGGCCCTCGGGGGCACGCTATGAGGGCGCATGGCTCAACGGCCTGCCAC
ACGGCTCAGGCACCATGCGCTACGCCAACGGCGAGCACTACGCCGGTGAG
CCTGTCACCTGTGCATAATTCCTACCTCAAGAAGTATTCGGGGGTGCGCT
ACGAGGGGGCATGGCTCAGCGGCCTGCCACACGGCTCAGGCACCATGCGT
TACGCCAACGGCGAGCACTGCGCTGGTGAGCCTCACCAGTACACAAGGGG
AACAGGCCCTAAAGAGTGTGAAGTGTGAAGTTTCAGCGAAGAGTCTGGGA
TAGGCAGCAGCATGTGCATCACTCCTTGCTTGGCATCGATTAGCAAGGCT
AGGCACACGGCTGTAGCAGAGTACTAGCTGGTAGGCTGGCAGAGAATGGG
TCAGGCACCATGCACTACGCCAACGGCGAGCACCACATCGGTGAGCCTGT
CACCTGTGCATGACTCCTACTTCAAGAAACATTGAAAACTGCACAGAAGT
AAATGTTGCTCGGGGGCTCAACGGCCTGCCACACGGCTCAGGCACCATGC
GCTACGCCACGGCGAGCATTACGTCGGTGAGCCTCCCCAGTGCATAATTT
CCACCCTAAGAAGCATCATAACTGCACAGAAGCAAGTGTTGCTGGCTCTG
GGAAAAGACGCTGTTTGAATACTTAAGGGAGGCAATAATGCCAATGGCAA
GCATTACGCTGGTGAGCTTGCACGCACTTGTTTGCTTTTTGCAGCTGCAA
AGAAGCAAGCGGTGCTCGATGTTGTACCACGCTGGGTAGAGACACTCCCC
GCTATCCAGACTCCAAAAGGGGACAAAAAGGCGGACTGTAGAGTACAGTT
GCCTCGGCTAGCTGTGCTGCACCGCCAAGCCCCTGCTTCGGATTTTCCTC
GCCCCCCAGTCTGCAGACTCATCACCAGTCACATTACATCAAATTTGACA
ACTTCATCGGCGTCACTCCCACTGCCATGCCTCCCATCTGACGCCCAGGC
GAATTTGCATTCGCGCGCCGCCACGGCCGCGGCCGCCACACATGGCCAGA
CGGCGTGTACTATGATGGCGGTTTTGCCGATGGCATGGCGCAGGGGGAGG
GGGAGCTCGTGTGCAGACCCCCCGCAGGGTGGGAGTGGGGGCACCGGTAT
CGCGGACTGTGGCACCAAAATAGGTCAGCGCCTGCTTCTTGCAGCTGA back to topCoding sequence (CDS) from alignment at Contig_102:515214..520011- >mRNA_11851 ID=mRNA_11851|Name=jgi.p|Trimin1|173474|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1209bp|location=Sequence derived from alignment at Contig_102:515214..520011- (Tribonema minus UTEX_B_3156 ) ATGTGGCACGCAGGGCATCGCTCAGGAGTCGGCGCTGTTCTGCGCCGGTC GCGCGCCCCTATCGAGCAGCACGCTTCAGCTGTCTACACATCAAAGAAGC AGCCGCTTTCGGGGGTTCGGAGGGACTCGGGCGTTGGCACCGGGGCGAGC GCTGCTGCAGATGCCACTGCCGATGGCGCCCCTGGTTCTGACGGCGCGCT GTATGCATATGTCGGGGGTTTTGCCTACGGCGCGCGCGACGGGGCGGGCG TGATGGTTGACGGCGTCAAGGGGGAGTCGTACGAGGGGGAGTTCAGGGAG GGGAGAGTCACAGGCGTGGGGCGGCTGACGTGCGCCAACGGGGACGTCTG GGAGGGGGCGTTCGAGAGGGGGGCGCCGCGGGGGCTCGTGTTCTTCGCGC GCAAGAACGGCGACGAGTACTTCGGGCACGTGCAGGAGGGCCGCGCGCAC GGCATCGGCGTCCTCGCCCTCGCGCGTGGCGAGACGTACCGCGGCGAGTT CGTGCGCGACAGGCGCTGCGGCCGCGGCGCGTGCATCTACCCTGACGGCG CGCGCTACTGCGGCGGCTGGCTGCGCGATCAGCCGCACGGTTTCGGCGTG CTGCTGCTGGCAGCAGGTGCGTCGCATTATGTGGGCCAGTGGCGCCGCGG CGTCAAACATGGCTACGGGCGCTATGTGTTCCGCTGCGGCGACGTCTACG ACGGCGACTTTGCGGACGACAAGGCGCGCGGCACAGGAGTGTACAGCGCC GAGACGGGGGAGATCTACTGCGGGGGCTGGCGTGACAACCGCCGCAGCGG CAAAGGCGAGCTCACCTGGCCCTCGGGGGCACGCTATGAGGGCGCATGGC TCAACGGCCTGCCACACGGCTCAGGCACCATGCGCTACGCCAACGGCGAG CACTACGCCGGTGAGCCTTATTCGGGGGTGCGCTACGAGGGGGCATGGCT CAGCGGCCTGCCACACGGCTCAGGCACCATGCGTTACGCCAACGGCGAGC ACTGCGCTGGCGAATTTGCATTCGCGCGCCGCCACGGCCGCGGCCGCCAC ACATGGCCAGACGGCGTGTACTATGATGGCGGTTTTGCCGATGGCATGGC GCAGGGGGAGGGGGAGCTCGTGTGCAGACCCCCCGCAGGGTGGGAGTGGG GGCACCGGTATCGCGGACTGTGGCACCAAAATAGGTCAGCGCCTGCTTCT TGCAGCTGA back to top
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