mRNA_11705 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|174556
Unique Name	mRNA_11705
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|174556 vs. uniprot
Match: A0A835ZBV6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBV6_9STRA)

HSP 1 Score: 679 bits (1752), Expect = 1.110e-242
Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 1

Query:    1 MTLRSPSPXXXXXXXXXXXXXCLHALCTLHAGQCPXXXXXHSPCLLQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLALIGASYLDDGSSXXXXXXXXXRQHLRLALGFTFLIYSAVSTVVFQCFACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALRVHRRDILRHYAAXXXXXXXXXXXXXXXXXXXXFHFLWSAYRREFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAGLIPVSPDAAAARCALKEDAPLEEGGEVAPWAERPRQRGLPLGRAPPRSPPKSP 1386
            MTLRSPSPXXXXXXXXXXXXXCLHALCTLHAGQCPXXXXXHSPCLLQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLALIGASYLDDGSSXXXXXXXXXRQHLRLALGFTFLIYSAVSTVVFQCFACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALRVHRRDILRHYAAXXXXXXXXXXXXXXXXXXXXFHFLWSAYRREFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAGLIPVSPDAAAARCALKEDAPLEEGGEVAPWAERPRQRGLPLGRAPPRSPPKSP
Sbjct:    1 MTLRSPSPXXXXXXXXXXXXXCLHALCTLHAGQCPXXXXXHSPCLLQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLALIGASYLDDGSSXXXXXXXXXRQHLRLALGFTFLIYSAVSTVVFQCFACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALRVHRRDILRHYAAXXXXXXXXXXXXXXXXXXXXFHFLWSAYRREFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAEAGLIPVSPDAAAARCALKEDAPLEEGGEVAPWAERPRQRGLPLGRAPPRSPPKSP 462

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BLAST of jgi.p|Trimin1|174556 vs. uniprot
Match: A0A835YTW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW6_9STRA)

HSP 1 Score: 380 bits (975), Expect = 9.570e-116
Identity = 301/449 (67.04%), Postives = 314/449 (69.93%), Query Frame = 1

Query:  136 LQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLALIGASYL-------------------------------DDGSSXXXXXXXXXRQHLRLALGFTFLIYSAVSTVVFQ----CFACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALRVHRRDILRHYAAXXXXXXXXXXXXXXXXXXXXFHFLWSAYRREFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AAAEAGLIPVSPDAAAARCALKEDAPLEEGGEVAPWAERPRQRGLPLGRAPPRS 1371
            ++IISQ VSATGARLPPVYE F+AGLS+LG DV WFL MACLVRVNYYARLLIATL PL VLALIGASYL                                    XXXXXXXXX+QHLRLALGFTFLIYSAVSTVVFQ    CFACDDL DAGARYLRADYSLSCDTPRHA YA YAAV                                                                   QECGRRLLLTGVMVF+APGTPGQLAAGCVFAVLSLLA ALCAPHADALDGQLY GGCVVIFLTA +ALLYRLDAALPDPQDR+VVGAVL ALNVLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    AAAE+GLIPVSPDAAA RCA ++  PL+EG EVAPWA+R  QRGLPLGR  P S
Sbjct: 1040 MRIISQCVSATGARLPPVYEAFVAGLSVLGLDVAWFLCMACLVRVNYYARLLIATLAPLPVLALIGASYLWRVRHAPPPLLPLPRRPRPQRRGAQQAEGXXXXXXXXXXXXXXXXQQHLRLALGFTFLIYSAVSTVVFQASCTCFACDDLTDAGARYLRADYSLSCDTPRHAHYAAYAAV-------------------------------------------------------------------QECGRRLLLTGVMVFVAPGTPGQLAAGCVFAVLSLLALALCAPHADALDGQLYTGGCVVIFLTALAALLYRLDAALPDPQDRSVVGAVLFALNVLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRGAAAESGLIPVSPDAAA-RCASQDGVPLKEG-EVAPWAKR--QRGLPLGRVLPHS 1417

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BLAST of jgi.p|Trimin1|174556 vs. uniprot
Match: A0A835YLB8_9STRA (Pectin lyase fold/virulence factor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLB8_9STRA)

HSP 1 Score: 224 bits (570), Expect = 6.980e-61
Identity = 128/317 (40.38%), Postives = 183/317 (57.73%), Query Frame = 1

Query:  133 LLQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLALIGASYLDDGSSXXXXXXXXXR-QHL------RLALGFTFLIYSAVSTVVFQCFACDDLADA-GARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALRVHRRDILRHYAAXXXXXXXXXXXXXXXXXXXXFHFLWSAYRREFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLL 1059
            ++QI++Q++S TG  +P +Y TFI+ L ++  D+   LS  C+  VN+Y +LL++T+ PL +LAL+G +Y+              R  HL       L L FTFLI+SA STV+FQ FACD +    G R+LRADY++ CDT  +  Y +YAA+M  V+P+GIP  Y  AL   R  I     A                      FLW  YRR+F++WEV ECGRRLLL+G +VFI PG+ GQ    C+FA  S+L +  C PH   LD  LY+ G  ++FLT F AL+ +  +   D +D  ++  +L+ALN++L
Sbjct:  535 VMQILTQYLSITGVPIPALYRTFISWLDLINLDMSVVLSPGCVFDVNFYQKLLLSTITPLCILALLGLAYVVASRHANRSGRWGQRIYHLFVDKAGLLVLSFTFLIFSATSTVIFQTFACDAIPGFNGKRFLRADYAIECDTATYDAYRIYAAIMVLVYPVGIPALYMAALWWQRSAIKEVPEAADGEDAEVADNVHLASLG----FLWQPYRRQFWYWEVVECGRRLLLSGGLVFILPGSFGQSVYACIFAYFSILVYLRCGPHNCKLDATLYSLGATILFLTMFVALVAQYGSLDVDEKDANIISVMLIALNLVL 847

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BLAST of jgi.p|Trimin1|174556 vs. uniprot
Match: A0A836CD27_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD27_9STRA)

HSP 1 Score: 224 bits (572), Expect = 9.150e-61
Identity = 142/353 (40.23%), Postives = 180/353 (50.99%), Query Frame = 1

Query:  133 LLQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLA-LIGASYLDD----------GSSXXXXXXXXXRQHLRLALGFTFLIYSAVSTVVFQC-----FACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALRVHRRDILRHYA----------------------------AXXXXXXXXXXXXXXXXXXXXFHFLWSAYRREFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLL 1059
            + Q+I QFV  TGA LP VY  F+A L  + FD+ W  S  C+   ++Y RLL+ATL+PL ++A LI A  L            G            +   L L FTFLI+S  ST+VFQ      FACDD+A  G  YLRADY++ C TP+H RY++++ +M AV+P+GIP  YA  L  HR D     A                            A                      FLW  YR E+Y+WEV EC RRLLLTGV+VFI PGTP Q A  CVFA  S +A+   APHA A D  +Y GG  ++FL+ F AL  + D A  D    A V A+L+ LN LL
Sbjct:  692 VFQLIVQFVMITGAPLPDVYARFVAVLDFVNFDLSWLFSAGCVWDTSFYDRLLLATLVPLGIVAALIAARALAQXXXXXXXXXXGGVRAAVHRLLVDKFWPLVLCFTFLIFSTTSTIVFQAREGLTFACDDVAGTGKSYLRADYAVECGTPQHYRYSLFSMLMIAVYPIGIPALYAVMLWRHRADFAARRARCRGGDGGGSSGLTAGLSVRYDSEQQQVAPAAEPRALRALAPAHLELSSTEFLWRPYRPEYYYWEVLECFRRLLLTGVLVFIRPGTPAQSAYACVFAYCSAVAYLRYAPHAGAADAAVYTGGASILFLSMFVALSIQADFAGTDTSGAAAVSALLIILNTLL 1044

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BLAST of jgi.p|Trimin1|174556 vs. uniprot
Match: A0A835YUM0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM0_9STRA)

HSP 1 Score: 222 bits (565), Expect = 9.910e-60
Identity = 133/347 (38.33%), Postives = 182/347 (52.45%), Query Frame = 1

Query:  133 LLQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLALIGASYLD------------DG----------------SSXXXXXXXXXR----------QHLRLALGFTFLIYSAVSTVVFQCFACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALRVHRRDILRHYAAXXXXXXXXXXXXXXXXXXXXFHFLWSAYRREFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLL 1059
            ++Q+++QF S TGA  P +Y  F+  L++   D+  FLS  C VR ++Y RLL  T+ PL  +A +GA +L             DG                SS         R          +H  L L FTFLI+S  ST VFQ FACD L   G  YLRADY+LSC T RH  Y +YA+ M  V+P+GIP  YA  LR HR+ I RH                         FLW+ Y++  Y+WE+ EC RRLLL+G +VFI PGTP Q A  C  A+++++ +   APH D+ D ++Y  G ++IF + FSALL + D    D +   V+  +L+AL+VLL
Sbjct:  901 VVQVLTQFASVTGAPFPQLYRGFLRWLNLFSLDLSLFLSAGCYVRTDFYDRLLFVTIAPLVCVAALGAFHLFVCRRHQRRTGGLDGXXXXXXXXXXXXXXTSSSRSLAQWRSARARERLDDIVSRHATLLLAFTFLIFSFASTTVFQTFACDCLDGTGECYLRADYALSCGTARHRAYVIYASFMVLVYPVGIPALYAYMLRRHRKGIARHEDGGVVAASLKPTK-----------FLWTPYKKTVYFWELIECARRLLLSGFLVFIFPGTPAQSAVACTLALITIVVYGELAPHKDSTDHRVYVLGSIIIFFSMFSALLVQGDYVAQDDRSAQVISVLLIALSVLL 1236

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BLAST of jgi.p|Trimin1|174556 vs. uniprot
Match: A0A836CHG0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG0_9STRA)

HSP 1 Score: 214 bits (546), Expect = 8.460e-58
Identity = 126/319 (39.50%), Postives = 172/319 (53.92%), Query Frame = 1

Query:  133 LLQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLALIGASYLD-------DGSSXXXXXXXXXRQHLRLALGFTFLIYSAVSTVVFQCFACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALRVHRRDILRHYAAXXXXXXXXXXXXXXXXXXXXFHFLWSAYRRE---FYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLL 1059
            + Q+++Q+    G  LP +YE F+  L+ +  D+   LS  CL   ++Y RLL+ TL+PL + AL+ A+Y          G           R  L L L  +FL++S+ ST++FQ FACD ++     YLRADYS+SC  PRHAR+ VYAA M  V+P+GIPVAY   LR  R  I                            FLW  Y R+   +Y+WEV ECGRRLLLTGV+VFI PG+ GQ A  CVFA +S+  + LC PH + LD  LY  G  ++F+T F  L+ +   A   P D      +L+ LN+ L
Sbjct:  494 VFQVLTQYFQIAGVPLPDLYEQFLVWLNFVNVDLSSLLSSGCLWNSDFYDRLLLVTLLPLGIAALLCAAYAACKRRAQASGQRGKLYSLFVKRAGL-LLLTLSFLVFSSSSTIIFQTFACDRISGTNDEYLRADYSVSCTDPRHARFQVYAAFMIFVYPIGIPVAYLALLRRRRVAIRGVPDEDTGSFYSRADDSELDPQLRAVAFLWQPYARQAARYYYWEVVECGRRLLLTGVLVFIRPGSIGQSAYACVFAYVSIAVYLLCQPHLNRLDTYLYGLGATIVFITYFVTLMAQTGGAGAHPGDNDATALLLILLNIAL 811

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BLAST of jgi.p|Trimin1|174556 vs. uniprot
Match: A0A835YVC3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVC3_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.620e-57
Identity = 131/321 (40.81%), Postives = 175/321 (54.52%), Query Frame = 1

Query:  133 LLQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLALI--GASYLDDGSSXXXXXXXXXR-------QHLRLALGFTFLIYSAVSTVVFQCFACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALR---VHRRDILRHYAAXXXXXXXXXXXXXXXXXXXXFHFLWSAYRREFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLL 1059
            +LQ+++Q+VS TG  LP  Y  F+ G+SI   D+ W  S  C + VN+Y RLL+ATL PLA++ALI  G  YL   +                  + L  A GFTFLI++ VS  VF+ FACD+L   G+ YLR DYS+ C TP H  Y ++A VM   +P+GIP  Y   L    V RRD   H                         FLW  Y+   ++WEV EC RRL+LTG++VFI PGTPGQ A  CVFAV + + +    PH D+ D  LY  G  ++F++ F +LL ++     D     +VG +LVALNVLL
Sbjct:  345 VLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSPGCAMNVNFYDRLLMATLSPLAIIALIFAGRLYLIARAQFGRTPHRSHATLQLLVSEDLNAAFGFTFLIFAGVSVTVFETFACDELQYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARRD---HGQTSQLAKASL--------------FLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYFLSLLMQVSYT--DEASETIVGNLLVALNVLL 646

[Close]

BLAST of jgi.p|Trimin1|174556 vs. uniprot
Match: A0A836CF41_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF41_9STRA)

HSP 1 Score: 213 bits (543), Expect = 7.980e-57
Identity = 131/321 (40.81%), Postives = 175/321 (54.52%), Query Frame = 1

Query:  133 LLQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLALI--GASYLDDGSSXXXXXXXXXR-------QHLRLALGFTFLIYSAVSTVVFQCFACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALR---VHRRDILRHYAAXXXXXXXXXXXXXXXXXXXXFHFLWSAYRREFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLL 1059
            +LQ+++Q+VS TG  LP  Y  F+ G+SI   D+ W  S  C + VN+Y RLL+ATL PLA++ALI  G  YL   +                  + L  A GFTFLI++ VS  VF+ FACD+L   G+ YLR DYS+ C TP H  Y ++A VM   +P+GIP  Y   L    V RRD   H                         FLW  Y+   ++WEV EC RRL+LTG++VFI PGTPGQ A  CVFAV + + +    PH D+ D  LY  G  ++F++ F +LL ++     D     +VG +LVALNVLL
Sbjct:  932 VLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSPGCAMNVNFYDRLLMATLSPLAIIALIFAGRLYLIARAQFGRTPHRSHATLQLLVSEDLNAAFGFTFLIFAGVSVTVFETFACDELQYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARRD---HGQTSQLAKASL--------------FLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYFLSLLMQVSYT--DEASETIVGNLLVALNVLL 1233

[Close]

BLAST of jgi.p|Trimin1|174556 vs. uniprot
Match: A0A835YZ05_9STRA (UCH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ05_9STRA)

HSP 1 Score: 213 bits (543), Expect = 8.230e-57
Identity = 131/321 (40.81%), Postives = 175/321 (54.52%), Query Frame = 1

Query:  133 LLQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLALI--GASYLDDGSSXXXXXXXXXR-------QHLRLALGFTFLIYSAVSTVVFQCFACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALR---VHRRDILRHYAAXXXXXXXXXXXXXXXXXXXXFHFLWSAYRREFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLL 1059
            +LQ+++Q+VS TG  LP  Y  F+ G+SI   D+ W  S  C + VN+Y RLL+ATL PLA++ALI  G  YL   +                  + L  A GFTFLI++ VS  VF+ FACD+L   G+ YLR DYS+ C TP H  Y ++A VM   +P+GIP  Y   L    V RRD   H                         FLW  Y+   ++WEV EC RRL+LTG++VFI PGTPGQ A  CVFAV + + +    PH D+ D  LY  G  ++F++ F +LL ++     D     +VG +LVALNVLL
Sbjct:  593 VLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSPGCAMNVNFYDRLLMATLSPLAIIALIFAGRLYLIARAQFGRTPHRSHATLQLLVSEDLNAAFGFTFLIFAGVSVTVFETFACDELQYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARRD---HGQTSQLAKASL--------------FLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYFLSLLMQVSYT--DEASETIVGNLLVALNVLL 894

[Close]

BLAST of jgi.p|Trimin1|174556 vs. uniprot
Match: A0A835Z719_9STRA (UCH domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z719_9STRA)

HSP 1 Score: 213 bits (543), Expect = 8.960e-57
Identity = 131/321 (40.81%), Postives = 175/321 (54.52%), Query Frame = 1

Query:  133 LLQIISQFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIATLMPLAVLALI--GASYLDDGSSXXXXXXXXXR-------QHLRLALGFTFLIYSAVSTVVFQCFACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIPVAYATALR---VHRRDILRHYAAXXXXXXXXXXXXXXXXXXXXFHFLWSAYRREFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAPHADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALNVLL 1059
            +LQ+++Q+VS TG  LP  Y  F+ G+SI   D+ W  S  C + VN+Y RLL+ATL PLA++ALI  G  YL   +                  + L  A GFTFLI++ VS  VF+ FACD+L   G+ YLR DYS+ C TP H  Y ++A VM   +P+GIP  Y   L    V RRD   H                         FLW  Y+   ++WEV EC RRL+LTG++VFI PGTPGQ A  CVFAV + + +    PH D+ D  LY  G  ++F++ F +LL ++     D     +VG +LVALNVLL
Sbjct:  932 VLQVLTQYVSITGGDLPLSYTHFLNGVSIFSLDLRWLTSPGCAMNVNFYDRLLMATLSPLAIIALIFAGRLYLIARAQFGRTPHRSHATLQLLVSEDLNAAFGFTFLIFAGVSVTVFETFACDELQYVGSSYLRVDYSIECYTPEHTAYRIFAGVMLLFYPIGIPALYMGTLWLCFVARRD---HGQTSQLAKASL--------------FLWEPYQANVFYWEVVECVRRLMLTGLLVFIMPGTPGQSAVACVFAVFTGIGYESMRPHRDSYDMWLYRIGYSIVFVSYFLSLLMQVSYT--DEASETIVGNLLVALNVLL 1233

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|174556 vs. uniprot

BLAST of jgi.p|Trimin1|174556 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZBV6_9STRA	1.110e-242	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YTW6_9STRA	9.570e-116	67.04	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YLB8_9STRA	6.980e-61	40.38	Pectin lyase fold/virulence factor n=1 Tax=Tribone...	[more]
A0A836CD27_9STRA	9.150e-61	40.23	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YUM0_9STRA	9.910e-60	38.33	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CHG0_9STRA	8.460e-58	39.50	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YVC3_9STRA	1.620e-57	40.81	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CF41_9STRA	7.980e-57	40.81	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835YZ05_9STRA	8.230e-57	40.81	UCH domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A835Z719_9STRA	8.960e-57	40.81	UCH domain-containing protein n=2 Tax=Tribonema mi...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_115	contig	Contig_115:491463..493139 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|174556\|e_gw1.115.76.1
Max annot lvl	2880.D7FUB5\|-
EggNOG OGs	2D43J@1\|root,2STRI@2759\|Eukaryota
Evalue	2.23e-55
Seed ortholog	2880.D7FUB5
Hectar predicted targeting category	other localisation
TranscriptId	174878
Track	FilteredModels1
ProteinId	174556

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|174556	gene_11705	Tribonema minus UTEX_B_3156	gene	Contig_115 491463..493139 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11705_1	exon_11705_1	Tribonema minus UTEX_B_3156	exon	Contig_115 491463..491806 +
exon_11705_2	exon_11705_2	Tribonema minus UTEX_B_3156	exon	Contig_115 491903..492253 +
exon_11705_3	exon_11705_3	Tribonema minus UTEX_B_3156	exon	Contig_115 492446..493139 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11705	CDS_11705	Tribonema minus UTEX_B_3156	CDS	Contig_115 491463..491806 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|174556	Trimin1\|174556\|e_gw1.115.76.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_115 491463..493139 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_115:491463..493139+
coding sequence from alignment at Contig_115:491463..493139+

spliced messenger RNA

>mRNA_11705 ID=mRNA_11705|Name=jgi.p|Trimin1|174556|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1389bp|location=Sequence derived from alignment at Contig_115:491463..493139+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACCCTCCGCTCACCCTCACCCCCCCCCCCCATTGCTGCAGCCCCTCC
CCCCCCCCCCCCCTGCTTGCACGCCCTCTGCACACTTCACGCAGGCCAAT
GCCCCCCCCCCCCCCCCCCCCATTCTCCCTGCCTCCTGCAGATCATCTCG
CAGTTTGTGTCGGCAACGGGGGCGCGCCTCCCCCCTGTGTACGAGACCTT
CATCGCGGGCCTCTCCATACTCGGCTTCGACGTCGGCTGGTTCCTCTCCA
TGGCGTGCCTCGTGCGCGTCAACTACTACGCGCGCCTCCTCATCGCGACG
CTCATGCCGCTGGCCGTGCTCGCACTCATCGGCGCCAGCTACCTTGACGA
CGGCAGCAGCGCGGCAGCGGCGGCGGCAGCGGCCGCGCGGCAGCACCTGC
GGCTCGCGCTGGGCTTCACGTTCCTCATCTACTCGGCGGTTTCGACGGTT
GTCTTCCAGTGCTTCGCCTGTGATGATCTCGCGGATGCCGGCGCGCGCTA
CCTGCGCGCCGACTACTCGCTGAGCTGCGACACGCCGCGGCACGCGCGCT
ATGCCGTGTACGCTGCCGTCATGGCGGCCGTGTTCCCGCTGGGCATCCCC
GTCGCCTACGCGACCGCGCTGCGCGTGCACCGCAGGGACATCCTGCGCCA
CTACGCGGCCGAGGAGGCTGCGGCGGCGGCGGCGGCGGCGGCGGCCGCCG
CCGGCCGCGCGCCGCCCCCCTTCCACTTCCTGTGGAGCGCCTACAGGCGC
GAGTTCTACTGGTGGGAGGTGCAGGAGTGCGGGCGCCGTCTGCTGCTGAC
GGGCGTCATGGTCTTCATCGCGCCGGGCACGCCAGGGCAGCTCGCCGCGG
GCTGCGTCTTCGCGGTCCTGTCGCTGCTCGCCTTTGCGCTGTGCGCGCCG
CACGCCGACGCGCTCGACGGCCAGCTGTACGCCGGCGGCTGCGTCGTCAT
CTTCCTCACGGCGTTCTCGGCGCTGCTCTACAGGCTCGACGCCGCGCTGC
CAGACCCGCAGGACCGCGCCGTCGTCGGCGCCGTCCTCGTCGCGCTCAAC
GTGCTGCTCGCCGCCGCCGCGGCCGCGCAGGTGCTCGCCGTCGTAGCGCA
CGAGGCGGCGGCGCGGCGGCGCGCGGCGGCGCCGGCGGAGGCCCCCGCGC
CGCGTCGCCACCTGAGCGCTGCCTTCCGCCGCGGCGGCGGCAGCAGCGGC
TGCGGCGGCGCGGCAGCGGAGGCCGGCCTCATTCCCGTCTCGCCGGACGC
TGCTGCTGCGCGCTGCGCGTTGAAAGAGGACGCGCCGCTTGAAGAAGGAG
GTGAAGTTGCGCCGTGGGCGGAGCGGCCGCGGCAGCGCGGACTGCCGCTG
GGGCGCGCGCCGCCGCGTTCCCCTCCGAAGTCACCGTGA

protein sequence of jgi.p|Trimin1|174556

>Trimin1|174556|e_gw1.115.76.1 ID=Trimin1|174556|e_gw1.115.76.1|Name=jgi.p|Trimin1|174556|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=463bp
MTLRSPSPPPPIAAAPPPPPPCLHALCTLHAGQCPPPPPPHSPCLLQIIS
QFVSATGARLPPVYETFIAGLSILGFDVGWFLSMACLVRVNYYARLLIAT
LMPLAVLALIGASYLDDGSSAAAAAAAAARQHLRLALGFTFLIYSAVSTV
VFQCFACDDLADAGARYLRADYSLSCDTPRHARYAVYAAVMAAVFPLGIP
VAYATALRVHRRDILRHYAAEEAAAAAAAAAAAAGRAPPPFHFLWSAYRR
EFYWWEVQECGRRLLLTGVMVFIAPGTPGQLAAGCVFAVLSLLAFALCAP
HADALDGQLYAGGCVVIFLTAFSALLYRLDAALPDPQDRAVVGAVLVALN
VLLAAAAAAQVLAVVAHEAAARRRAAAPAEAPAPRRHLSAAFRRGGGSSG
CGGAAAEAGLIPVSPDAAAARCALKEDAPLEEGGEVAPWAERPRQRGLPL
GRAPPRSPPKSP*

mRNA from alignment at Contig_115:491463..493139+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11705 ID=mRNA_11705|Name=jgi.p|Trimin1|174556|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1677bp|location=Sequence derived from alignment at Contig_115:491463..493139+ (Tribonema minus UTEX_B_3156 )
ATGACCCTCCGCTCACCCTCACCCCCCCCCCCCATTGCTGCAGCCCCTCC
CCCCCCCCCCCCCTGCTTGCACGCCCTCTGCACACTTCACGCAGGCCAAT
GCCCCCCCCCCCCCCCCCCCCATTCTCCCTGCCTCCTGCAGATCATCTCG
CAGTTTGTGTCGGCAACGGGGGCGCGCCTCCCCCCTGTGTACGAGACCTT
CATCGCGGGCCTCTCCATACTCGGCTTCGACGTCGGCTGGTTCCTCTCCA
TGGCGTGCCTCGTGCGCGTCAACTACTACGCGCGCCTCCTCATCGCGACG
CTCATGCCGCTGGCCGTGCTCGCACTCATCGGCGCCAGCTACCTGTGGCG
CGTCCGCTACAGGCCGCCGCCGCTGCTGCCGCTGCCGCGCCGCCTGCGCC
GCCGCGGCGCGCAGCAGCAGACCGACGGCGGCGCCGTGAGTGACGACGGC
AGCAGCGCGGCAGCGGCGGCGGCAGCGGCCGCGCGGCAGCACCTGCGGCT
CGCGCTGGGCTTCACGTTCCTCATCTACTCGGCGGTTTCGACGGTTGTCT
TCCAGTGCTTCGCCTGTGATGATCTCGCGGATGCCGGCGCGCGCTACCTG
CGCGCCGACTACTCGCTGAGCTGCGACACGCCGCGGCACGCGCGCTATGC
CGTGTACGCTGCCGTCATGGCGGCCGTGTTCCCGCTGGGCATCCCCGTCG
CCTACGCGACCGCGCTGCGCGTGCACCGCAGGGACATCCTGCGCCACTAC
GCGGCCGAGGAGGCTGCGGCGGCGGCGGCGGCGGCGGCGGCGTTGGAGGC
GGAGGCGGCGCCGCGCAGCGCTGCCGGCGGCGCCGACAACAGCATCTCCA
CCGCCGGCATCAGCAGTGCTAGCGGCATCGACTGCGGCGACGCGCTGCGC
AGCCGCGGCGCTGGCGACAGCGGCAGCAACGGCGACGGCGATGGCGACGG
CAGCGGCGCCAGCGGCGGCGACCGCGACCGCAGCGCCGCCGGCCGCGCGC
CGCCCCCCTTCCACTTCCTGTGGAGCGCCTACAGGCGCGAGTTCTACTGG
TGGGAGGTGCAGGAGTGCGGGCGCCGTCTGCTGCTGACGGGCGTCATGGT
CTTCATCGCGCCGGGCACGCCAGGGCAGCTCGCCGCGGGCTGCGTCTTCG
CGGTCCTGTCGCTGCTCGCCTTTGCGCTGTGCGCGCCGCACGCCGACGCG
CTCGACGGCCAGCTGTACGCCGGCGGCTGCGTCGTCATCTTCCTCACGGC
GTTCTCGGCGCTGCTCTACAGGCTCGACGCCGCGCTGCCAGACCCGCAGG
ACCGCGCCGTCGTCGGCGCCGTCCTCGTCGCGCTCAACGTGCTGCTCGCC
GCCGCCGCGGCCGCGCAGGTGCTCGCCGTCGTAGCGCACGAGGCGGCGGC
GCGGCGGCGCGCGGCGGCGCCGGCGGAGGCCCCCGCGCCGCGTCGCCACC
TGAGCGCTGCCTTCCGCCGCGGCGGCGGCAGCAGCGGCTGCGGCGGCGCG
GCAGCGGAGGCCGGCCTCATTCCCGTCTCGCCGGACGCTGCTGCTGCGCG
CTGCGCGTTGAAAGAGGACGCGCCGCTTGAAGAAGGAGGTGAAGTTGCGC
CGTGGGCGGAGCGGCCGCGGCAGCGCGGACTGCCGCTGGGGCGCGCGCCG
CCGCGTTCCCCTCCGAAGTCACCGTGA

Coding sequence (CDS) from alignment at Contig_115:491463..493139+

>mRNA_11705 ID=mRNA_11705|Name=jgi.p|Trimin1|174556|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1389bp|location=Sequence derived from alignment at Contig_115:491463..493139+ (Tribonema minus UTEX_B_3156 )
ATGACCCTCCGCTCACCCTCACCCCCCCCCCCCATTGCTGCAGCCCCTCC
CCCCCCCCCCCCCTGCTTGCACGCCCTCTGCACACTTCACGCAGGCCAAT
GCCCCCCCCCCCCCCCCCCCCATTCTCCCTGCCTCCTGCAGATCATCTCG
CAGTTTGTGTCGGCAACGGGGGCGCGCCTCCCCCCTGTGTACGAGACCTT
CATCGCGGGCCTCTCCATACTCGGCTTCGACGTCGGCTGGTTCCTCTCCA
TGGCGTGCCTCGTGCGCGTCAACTACTACGCGCGCCTCCTCATCGCGACG
CTCATGCCGCTGGCCGTGCTCGCACTCATCGGCGCCAGCTACCTTGACGA
CGGCAGCAGCGCGGCAGCGGCGGCGGCAGCGGCCGCGCGGCAGCACCTGC
GGCTCGCGCTGGGCTTCACGTTCCTCATCTACTCGGCGGTTTCGACGGTT
GTCTTCCAGTGCTTCGCCTGTGATGATCTCGCGGATGCCGGCGCGCGCTA
CCTGCGCGCCGACTACTCGCTGAGCTGCGACACGCCGCGGCACGCGCGCT
ATGCCGTGTACGCTGCCGTCATGGCGGCCGTGTTCCCGCTGGGCATCCCC
GTCGCCTACGCGACCGCGCTGCGCGTGCACCGCAGGGACATCCTGCGCCA
CTACGCGGCCGAGGAGGCTGCGGCGGCGGCGGCGGCGGCGGCGGCCGCCG
CCGGCCGCGCGCCGCCCCCCTTCCACTTCCTGTGGAGCGCCTACAGGCGC
GAGTTCTACTGGTGGGAGGTGCAGGAGTGCGGGCGCCGTCTGCTGCTGAC
GGGCGTCATGGTCTTCATCGCGCCGGGCACGCCAGGGCAGCTCGCCGCGG
GCTGCGTCTTCGCGGTCCTGTCGCTGCTCGCCTTTGCGCTGTGCGCGCCG
CACGCCGACGCGCTCGACGGCCAGCTGTACGCCGGCGGCTGCGTCGTCAT
CTTCCTCACGGCGTTCTCGGCGCTGCTCTACAGGCTCGACGCCGCGCTGC
CAGACCCGCAGGACCGCGCCGTCGTCGGCGCCGTCCTCGTCGCGCTCAAC
GTGCTGCTCGCCGCCGCCGCGGCCGCGCAGGTGCTCGCCGTCGTAGCGCA
CGAGGCGGCGGCGCGGCGGCGCGCGGCGGCGCCGGCGGAGGCCCCCGCGC
CGCGTCGCCACCTGAGCGCTGCCTTCCGCCGCGGCGGCGGCAGCAGCGGC
TGCGGCGGCGCGGCAGCGGAGGCCGGCCTCATTCCCGTCTCGCCGGACGC
TGCTGCTGCGCGCTGCGCGTTGAAAGAGGACGCGCCGCTTGAAGAAGGAG
GTGAAGTTGCGCCGTGGGCGGAGCGGCCGCGGCAGCGCGGACTGCCGCTG
GGGCGCGCGCCGCCGCGTTCCCCTCCGAAGTCACCGTGA