mRNA_11703 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|352335 vs. uniprot
Match: A0A835ZD67_9STRA (HDAC_interact domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD67_9STRA) HSP 1 Score: 2222 bits (5758), Expect = 0.000e+0 Identity = 1519/1519 (100.00%), Postives = 1519/1519 (100.00%), Query Frame = 1
Query: 1 MGMGDGQGQPGXXXXXXXXXPIAGRPLRELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQRRAHALPSPPSALGPPGGAQRMPGGPMIPGXXXXXXXXXPLRASPQPTPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFRPVVKLTADGRIPHAIPMVNAAGELVAEQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGDKGTRGGAAPAPGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMASGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLFGPHQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSNFKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQHGSNAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAAARAAEEDGXXXXXXXXXXXTASAAALGAPHFMSPHMELAYAPREVQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWLTAGAPXXXXXXXDDAGARAAQTQYRAGCPVFTAFGEGKVIDARGDGTHGVELPGCGVIAVGPAHIFRILHEGPGAYANPRFEDNEFLDSGAGEGGGEGGEAGVMVPLSESLLLATQELYLLLRVHWMVADSYAYALRAVVAKMAAARHFCEAAALRRARACRHPMKAAGDAAPVXXXXXXXXXXXXLAQSLGLRASALPAEGLCSYPGFLARAAXXXXXXXXXXXEALKFEDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQAKPAGALRLSAYRANVGHFLRGRSDDVYRLQFTRAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQLLIEFIGVLDKTGRAADKKSAAARAQERASVSATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGDAPLDTEAEDAEGEDDGGGSTAGEGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDEDGXXXXXXXXXADVPKRRRID 4557
MGMGDGQGQPGXXXXXXXXXPIAGRPLRELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQRRAHALPSPPSALGPPGGAQRMPGGPMIPGXXXXXXXXXPLRASPQPTPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFRPVVKLTADGRIPHAIPMVNAAGELVAEQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGDKGTRGGAAPAPGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMASGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLFGPHQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSNFKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQHGSNAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAAARAAEEDGXXXXXXXXXXXTASAAALGAPHFMSPHMELAYAPREVQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWLTAGAPXXXXXXXDDAGARAAQTQYRAGCPVFTAFGEGKVIDARGDGTHGVELPGCGVIAVGPAHIFRILHEGPGAYANPRFEDNEFLDSGAGEGGGEGGEAGVMVPLSESLLLATQELYLLLRVHWMVADSYAYALRAVVAKMAAARHFCEAAALRRARACRHPMKAAGDAAPVXXXXXXXXXXXXLAQSLGLRASALPAEGLCSYPGFLARAAXXXXXXXXXXXEALKFEDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQAKPAGALRLSAYRANVGHFLRGRSDDVYRLQFTRAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQLLIEFIGVLDKTGRAADKKSAAARAQERASVSATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGDAPLDTEAEDAEGEDDGGGSTAGEGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDEDGXXXXXXXXXADVPKRRRID
Sbjct: 1 MGMGDGQGQPGXXXXXXXXXPIAGRPLRELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQRRAHALPSPPSALGPPGGAQRMPGGPMIPGXXXXXXXXXPLRASPQPTPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFRPVVKLTADGRIPHAIPMVNAAGELVAEQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGDKGTRGGAAPAPGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMASGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLFGPHQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSNFKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQHGSNAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAAARAAEEDGXXXXXXXXXXXTASAAALGAPHFMSPHMELAYAPREVQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWLTAGAPXXXXXXXDDAGARAAQTQYRAGCPVFTAFGEGKVIDARGDGTHGVELPGCGVIAVGPAHIFRILHEGPGAYANPRFEDNEFLDSGAGEGGGEGGEAGVMVPLSESLLLATQELYLLLRVHWMVADSYAYALRAVVAKMAAARHFCEAAALRRARACRHPMKAAGDAAPVXXXXXXXXXXXXLAQSLGLRASALPAEGLCSYPGFLARAAXXXXXXXXXXXEALKFEDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQAKPAGALRLSAYRANVGHFLRGRSDDVYRLQFTRAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQLLIEFIGVLDKTGRAADKKSAAARAQERASVSATPTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGDAPLDTEAEDAEGEDDGGGSTAGEGGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADDEDGXXXXXXXXXADVPKRRRID 1519
BLAST of jgi.p|Trimin1|352335 vs. uniprot
Match: A0A835ZFZ1_9STRA (Sin3a_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFZ1_9STRA) HSP 1 Score: 663 bits (1711), Expect = 2.120e-215 Identity = 496/707 (70.16%), Postives = 510/707 (72.14%), Query Frame = 1
Query: 2395 EVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAAARAAEEDGXXXXXXXXXXXTASAAALGAPHFMSPHMELAYAPREVQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWLTAGAPXXXXXXXDDAG---------------ARAAQTQYRAGCPVFTAFGEGKVIDARGDGTHGVELPGCGVIAVGPAHIFRILHEGPGAYANPRFEDNEFLDSGAGEGGGEGGEA-GVMVPLSESLLLATQELYLLLRVHWMVADSYAYALRAVVAK----------------------------MAAARHFCEAAALRRARACRHPMKAAGDAAP-VXXXXXXXXXXXXLAQSLGLRASALPAEGLCSYPGFLA----------------------------RAAXXXXXXXXXXXEALKFEDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQ------------------------------AKPAGALRLSAYRANVGHFLRGRSDDVYRLQFTRAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQLLIEFIGVLDKTGRAADKKSAAARAQERASVSATPTP 4206
++LELLRKNPAGAVPLILKRLKQK DTEWRQNRSSLDRQWRDLLERTYHK+LDRRSFYFKS DRRAYGHR LLAEI +LAAAR AE++G TASAAALGAPHFM+PHMELAYAPR+VQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWL AGAPXXXXXX DDAG ARAAQT+YRAGCPVFTAFGEGKV+DAR DGTHG GPGAYANPRFED+EFLDSGAGE GVMVPLSESLLLATQELYLLLRVHWMVADS A A VA MAAAR FCEAAALRR RA RHPMKAAGDAAP XXXXXXX LAQSLGLRASALPAEGLCSYPGFLA XXXXXXXXXXX+ALKF DYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQ AKPAGALRLSAYRANVGHFLRGRSD+VYRLQFTRAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGG+LLIEFI VLDKTGR DKKSAAARAQER S SA PTP
Sbjct: 5 KLLELLRKNPAGAVPLILKRLKQK--------------------DTEWRQNRSSLDRQWRDLLERTYHKALDRRSFYFKSTDRRAYGHRVLLAEIHNLAAARTAEDEGAADDGDDKAGGTASAAALGAPHFMAPHMELAYAPRDVQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWLAAGAPXXXXXXADDAGVRAALTLHCTLSWRSARAAQTRYRAGCPVFTAFGEGKVVDARSDGTHG----------------------GPGAYANPRFEDSEFLDSGAGEXXXXXXXXXGVMVPLSESLLLATQELYLLLRVHWMVADSAAGARALTVAPAAASPLLATPRACPPQLRLCAAGNGVEVMAAARQFCEAAALRRVRARRHPMKAAGDAAPPADAAXXXXXXXAALAQSLGLRASALPAEGLCSYPGFLAVLHTALGTETEERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALKFVDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQVSADAAXXXXXXXXXXXXXXXXXXXXXXXVAKPAGALRLSAYRANVGHFLRGRSDNVYRLQFTRAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRLLIEFIDVLDKTGRVGDKKSAAARAQERTSASAAPTP 669
BLAST of jgi.p|Trimin1|352335 vs. uniprot
Match: A0A1Z5JWN0_FISSO (Paired amphipathic helix protein Sin3a n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWN0_FISSO) HSP 1 Score: 485 bits (1248), Expect = 8.810e-143 Identity = 353/1001 (35.26%), Postives = 462/1001 (46.15%), Query Frame = 1
Query: 73 RPLRELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQRRAHALPSPPSALGPPGGAQRMPGGPMIPGXXXXXXXXXPLRASPQPTPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFRPVVKLTADGRIPHAIPMVNAAGELVAEQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGDKGTRGGAAPAPGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMA--SGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLFGP-HQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSNFKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQH----------GSNA------HYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAA--------------ARAAEEDGXXXXXXXXXXXTASAAALGAP----HFMSPHMELAYAPRE-VQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWL 2961
+P+REL+VEDAL+YLD VK EF +P IYNEFL IMKNFK Q +DTPGVI+RVS LFRGYNKLILGFNTFLP+GYKI L D+++ A AA+ ++ +PP GPP A P P + A + P AQV+ P + + + P+ Q EFDHAISYVT IK+RF+ +P Y FL+ILH YQ+EQRGIK+VLEQV+ LF DHPDLL+EFT+FLPD VQ+QA+ERL+RAA ESE R+R+A+ ++ +E RK + S P+P AQ E+ +R + P N A ER FF+ +E L A G +AWAEFLKC+DMY+ +I +R+EML V L G H +LF +FKR++ G T + WYS PLAEIDFS+CR+C+PSYRALP+ DYP CS+RS E VLND WVS+PVGSE+S F+HMR+N YEE LFR EDERFEIDMV+DS +T++ L P+AEEIA LA+ S+A +Q+ D +TLGV+H N I+RIYGD G E+LEL+ KNP A+PL+++RL+QK D EWR R L+R W++L E Y+KSLD R +++ D+RA R +++EI+D AA +A EE G + P +PHM L Y VQRDA L A+E GS + +D++R R+ V+ L FG W+
Sbjct: 218 QPVRELRVEDALIYLDDVKREFKQQPAIYNEFLLIMKNFKTQEVDTPGVIERVSKLFRGYNKLILGFNTFLPEGYKISLEDLQKKEAEEQAMEAAEVASKTNE----APPVVAGPPA-------------------------AKPAPIRKMAAL---------------------------------------------------------------------PTAQVKAKSPPKPIKTAPVAAPVRSSPTLKAKAPVAQQPAPPQQHQAVEFDHAISYVTKIKRRFANDPSIYHQFLQILHNYQREQRGIKEVLEQVAHLFQDHPDLLKEFTFFLPDAVQEQAKERLHRAAAESEHRKRQAE-----------------------------EIQEREIHRKSN--------------STDPSP------------------------------RLIDMTRAQQEEA----------------SRKRSLEDPESCVYNSAV--------------ERQFFDATKEALTAYTRDGGQAWAEFLKCLDMYAQDILSRQEMLNFVEPLLGKRHTKLFEEFKRILASAGQPRP----------------------TEESWYSVPLAEIDFSRCRRCSPSYRALPR--------------------DYPSHPCSDRSPEEAKVLNDVWVSLPVGSEESYTFRHMRRNTYEETLFRVEDERFEIDMVLDSNAATLQRLLPIAEEIAILAKEETLPLDIMASSSDATGLGAKRFQYTFDSKTLGVIHRNTISRIYGDSGGEMLELMVKNPTVAIPLVVQRLQQK--------------------DREWRAVRERLNRHWKELAELNYYKSLDHRGLTWRNIDKRATSTRIMISEIKDRAANGGAEGSEALKQKLEKAKEEHGTFYEVTMGDTMATNLDLTFLPKPDRRIFTPHMSLFYENNSWVQRDAFRILAFALERGSTSPADKERCHRLWVEFLGPWFGLSLNWM 955
BLAST of jgi.p|Trimin1|352335 vs. uniprot
Match: B5YNC2_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNC2_THAPS) HSP 1 Score: 485 bits (1248), Expect = 3.990e-142 Identity = 436/1349 (32.32%), Postives = 587/1349 (43.51%), Query Frame = 1
Query: 82 RELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQRRAHALPSPPSALGPPGGAQRMPGGPMIPGXXXXXXXXXPLRASPQPTPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFRPVVKLTADGRIPHAIPMVNAAGELVAEQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGDKGTRGGAAPAPGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMA-SGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLFGPHQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSNFKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQH-----GSNAH------------YQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAA--------------ARAAEEDGXXXXXXXXXXXTASAAALGAPH----FMSPHMELAY-APREVQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWLTAGA--------PXXXXXXXDDAGARAAQTQ-----------------------------YRAGCPVFTAFGEGKVIDA-RGDGTHGVELPGCGVIAVGPAHIFRILHEGPGAYANPRFEDNEFLDSGAGEGGGEGGEAGVMVPLSESLLLATQELYLLLRVHWMVADSYAYALRAVVAKMAAARHFCEAAALRRARACRHPMKAAGDAAPVXXXXXXXXXXXXLAQSLGLRASALPAEGLCSYPGFLAR--AAXXXXXXXXXXXEALKFEDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQAKPAGALRLSAYRANVGHFLRGRSDDVYRLQ 3897
RELKVEDALLYLDQVK+EFGD+P IYNEFL+IMK FKAQ +DT GVI+RV TLF GYN LILGFNTFLPDGYKIE+ D+E + + H LP+ S + PP G R P P R P PT M XXXXXXXX RGG M Q+QG G+ A P + T P + ++ EFDHAI YVT IKKRF+ +P+TY FLEILHTYQKEQRGIK+VLEQVS+LFADHPDLLREFT+FLPD VQ+QA+ERL+RAA E+E ++R A GG P R V V +GG PSG +P ++ + A ER FF+ V+ L + S +A+AEF+K +DMY+ EI +R +ML V L G +++LF +FKR+I G D W+S PL+EIDFS+CR+C+PSYRALP+ DYP P CSERS E VLND WVS+PVGSE+S F+HMRKNQYEE LFRCED RFEIDM ID ST++ L + +E+ L+++ GS + +Q+ LD R LGV+H + I RIYG+ G E+LEL KNPA A+P+++ RL+QK D EWR R +L+R+W+DL E Y+ SLD RS +++ D+RA R L+AEI+D AA +A EE G P +PHM Y Q+DA+ + +E GS + D++R R+ D + FG +W+ + A P +DA A T + V T GE KVI + DG + + P G + P +F ++ + + N+ V+ + L++ TQ LYL +R+H ++ R +AK + C+ AL R H K L P EG Y FL+ + E K+ED V+ +LGN+++ L ++DK + + + L+ +A+D ++E+ YQR AG+ + SA+R L +++Y Q
Sbjct: 219 RELKVEDALLYLDQVKLEFGDRPRIYNEFLEIMKCFKAQEVDTVGVINRVRTLFCGYNNLILGFNTFLPDGYKIEMRDMEPVFVGPGLGI----------HGLPA--SGIPPPAGGDRFMQ--AKPQARPGRGGPSPGRGMPLPTTTAQRMPPTAVAXXXXXXXXG-------------------------------------------RGGRGPAGM----QQLQGRGQM---AGRGPSPQQTQQATQPSPVQQQQPLAAPPQQRAVEFDHAIMYVTNIKKRFANQPRTYHTFLEILHTYQKEQRGIKEVLEQVSTLFADHPDLLREFTFFLPDAVQEQAKERLSRAAAEAEAKQRAAVEXXXXXXARERGG---------------------------------------------PTGWRAPKV-VTQKGGNVPGSAQKFVDMTQPGVIESSLEYN------------PSG-------------SPVRLQKQEAFVYNAGV--------ERQFFDAVKAALTSFSRDGQAYAEFIKTLDMYAQEILSRNDMLGYVERLLGKNRDLFEEFKRIIAAIGAPDAPAHD--------------------DSWHSVPLSEIDFSRCRRCSPSYRALPR--------------------DYPNPPCSERSEEELKVLNDVWVSLPVGSEESYTFRHMRKNQYEETLFRCEDMRFEIDMCIDGNASTMQRLSAIYDELQVLSENELLAKGSISKKCPDGAGLGGKIFQYTLDGRVLGVIHKHTIRRIYGEDGVEMLELCFKNPAVAIPIVVSRLRQK--------------------DKEWRAARDALNRKWKDLAEYNYYYSLDHRSITWRTTDKRATSTRTLVAEIKDRAAHDGLEGEAALNAKKEKAKEEHGSFYETTMGSTLPKKMDLTYLPKPTKTLFTPHMSFIYNGDSWAQQDAYRIISFGLERGSASPGDKERCYRLWRDFIAPWFGLELSWMQSPAVKFVPTITPEEIEDDIEDASAAENNTSNGGLVKEEVMKPVYTSENKGYFAVEGHVPFPPDTVVSTTLGEAKVIKYNKEDGIYDLSFP-SGTKLLPPDAVFCSIYPVETSLLTDQLRSNDQE---------------VLERSDDRLMIGTQPLYLFVRLHQILVR------RLNIAKSLST-EVCKDTALGR-----HIEK--------------------------LTFEGDPDEGKKRYDAFLSLIFSLLDAGNGSSETSEGGKYEDRVRCLLGNQSYELTTMDKLISHILKSLQHMANDDTLQNMIEI--YQRHTR--AGSFKPSAFREEAA--LLSEGENMYAFQ 1304
BLAST of jgi.p|Trimin1|352335 vs. uniprot
Match: A0A7S3P4U3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4U3_9STRA) HSP 1 Score: 485 bits (1248), Expect = 9.530e-142 Identity = 429/1350 (31.78%), Postives = 569/1350 (42.15%), Query Frame = 1
Query: 70 GRPLRELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQRRAHALPSPPSALGPPGGAQRMPGGPMIPGXXXXXXXXXPLRASPQPTPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFR--PVVKLTADGRIPHAIPMVNAAGELVAEQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGDKGTRGGAAPAPGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMA--SGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLFGP-HQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSNFKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQHGS-----------------NAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAA--------------ARAAEEDGXXXXXXXXXXXTASAAALGAPH----FMSPHMELAYAPRE-VQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWLTAGA---------------PXXXXXXXDD---------AGARAAQTQYR----------------AGCPVFTAFGEGKVIDAR-GDGTHGVELPGCGVIAVGPAHIF-RILHEGPGAYANP-RFEDNEFLDSGAGEGGGEGGEAGVMVPLSESLLLATQELYLLLRVHWMVAD--SYAYALRAVVAKMAAARHFCEAAALRRARACRHPMKAAGDAAPVXXXXXXXXXXXXLAQSLGLRASALPAE-GLCSYPGFLARAAXXXXXXXXXXXEALKFEDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQAKPAGALRLSAYRANVGH 3858
G +REL+VEDALLYLD VK EF ++P +YNEFL IMKNFK Q +DTPGVI RVS LFRGYN+LILGFNTFLP+GYKI L+D+E ++ AE +R+A QR P G + P P AH K + P P +TS A P + + P P AA Q EFDHAISYVTTIK+RF+ +P TY +FLEILHTYQKEQRGIK+VLEQV+ LF DHPDLLREFT+FLPD VQDQA+ERLNRAA +SE R ++ Q X R PA D GS + +H AA P N A ER FF+F RE L A G +AWAEF+KC+DMY+ EI +R EML +V L G + +LF +FKR++ G D WYS PL+EIDFS+CR+C+PSYRALP+ DYP P CS+RS E VLND WVS+PVGSE+S F+HMR+N YEE LFR EDERFEIDMV+DS +T++ L P+AEEIA+L+Q + +Q+ DK LGV+H N+I RIYGD G E+L+L+ KNP A+PL+++RL+QK D EWR R+ L+ W+DL E+ Y+KSLD RS +++ D+R R +L+EI+D + +A EE G + P +PH+ L Y VQRDA+ L A+E GS + D++R R+ + L FG W+ + A P +D AG + + G PV T +G G + + R D + V+L G + PA + IL Y + R ED L M P + L + TQ L+L LR+H ++ S AY L V +A + P G Y FLA E K+ED V+ +LG+ A+ L +LDK + + + L+++A D + L++L+R + K AG + ++R G+
Sbjct: 291 GMGMRELRVEDALLYLDDVKREFRNRPAVYNEFLTIMKNFKTQEVDTPGVIQRVSRLFRGYNRLILGFNTFLPEGYKISLADLERLD----------AERERQARLA------------VQRGEPPPEDVGLITLQSQPKQQQHPPLGVPPSAHQSQQNAAPART-----------------------------------------------------KPSFP-PXXXXXANAKTSTVATSANPPQARKEYAPKPPPQQPRATAAP--APTQAVEFDHAISYVTTIKRRFANDPSTYHSFLEILHTYQKEQRGIKEVLEQVAVLFQDHPDLLREFTFFLPDAVQDQAKERLNRAAADSESRLQKEYAMRQQQXXXXXXXXXXRAGHQRIIDMTEARA---------------------------PAQDASGSARKRT---------------------------LEHSVT--------------------AAQQPESYVYNSAV--------------ERQFFDFAREALTAYTRDGGQAWAEFMKCLDMYAQEILSRSEMLNMVEPLLGKKNAKLFEEFKRILAAAGATGGSAPPLE------------------DSWYSVPLSEIDFSRCRRCSPSYRALPR--------------------DYPPPPCSDRSDEEVKVLNDIWVSLPVGSEESYTFRHMRRNTYEEVLFRVEDERFEIDMVLDSNAATLQRLIPIAEEIAKLSQEEAVSVEAASKAPTEGAGMGGKRFQYSFDKNILGVIHRNSIARIYGDSGNEMLDLMVKNPTVAIPLVVERLRQK--------------------DKEWRNVRARLNVHWKDLAEQNYYKSLDHRSLTWRTIDKRTTSVRHMLSEIKDRSQNGGREGKEAIRQKIEKAKEEHGTFFEITNADSVSQDLDLTFLPKPERLLFTPHLSLKYENVSIVQRDAYRILAFALERGSTSPHDKERCHRLWNEFLGPWFGLSMTWMQSPAVAYQEATPSTKTPDIPVVVSEEDEDESMDEDIDVAGRVVTEETQKNENLDGAKVKDHHPLPVGSPVSTLYGPGTIEEFRQSDNLYCVKLAFGGKGYLRPATVLCSILPVEKSEYTDQLRAEDRSRL----------------MRP-GDQLAIGTQGLFLFLRLHHILVRRLSIAYNLAYSVGT-----------------------------------------DPTMATLVEQMPDTNPTNVGRRRYEAFLA-LVYTLLDGGVNGSEGGKYEDRVRSLLGHGAYELAALDKLISNIWKNLQSLAQDEVMWNLVQLYR----RHKDAGTFQPESFRQEAGY 1353
BLAST of jgi.p|Trimin1|352335 vs. uniprot
Match: A0A1V9YBI0_9STRA (Paired amphipathic helix protein Sin3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YBI0_9STRA) HSP 1 Score: 476 bits (1226), Expect = 1.200e-139 Identity = 423/1288 (32.84%), Postives = 572/1288 (44.41%), Query Frame = 1
Query: 64 IAGRPLRELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDI----EEMNRVHAAKVAAQAEAQRRAHALPSPPSALGPPGGAQRMPGGPMIPGXXXXXXXXXPLRASPQPTPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFRPVVKLTADGRIPHAIPMVNAAGELVAEQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGD-KGTRGGAAPAPGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMASGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLFGPHQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSNFKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQHGSNAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAAARAAEEDGXXXXXXXXXXXTASAAALGAPHFMSPHMELAYAPREVQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWLTAGAPXXXXXXXDDAGARAAQTQYRAGCPVFTAFGEGKVI---DARGDGTHGVELPGCGVIAVGPAHIFRILHEGPGAYANPRFEDNEFL-DSGAGEGGGEGGEAGVMVPLSESLLLATQELYLLLRVHWMVADSYAYALRAVVAKMAAARHFCEAAALRRARACRHPMKAAGDAAPVXXXXXXXXXXXXLAQSLGLRASALPAEGLCSYPGFLARAAXXXXXXXXXXXEALKFEDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQAKPAGALRLSAYRANVGHFLRGRSDDVYRLQF 3900
+ R LREL+VEDALLYLDQVK +FGD+P++YN+FLD+MK FK+Q IDTPGVI RVS LF+G+ LI GFNTFLP GY+I + + +R A ++ P+P A GP + +P +P P+ A M + AG G P + + P GA R A+ K+ A P + P+ A QP EFDHAISYVTTIKKRF+ EP+TYKAFLEILHTYQKEQ IK VL+QVS LF DHPDLLREFT+FLPD VQ+ AR+RL + A+ ++ R+ + M ++ G G G P K +SA P+ + S+ R A + +R GA KGD K R A + + + E S FE +++ L + R+ W EFLKC+++YS EI R +M+ LV +L G H ++ A+F +L+ G A ++W PLAE D SQCR+ TPSYRALP YP P S RS ME V ND WVSVP GSED S FK+MRKNQYEEALF+CEDERFEIDMVID+ STI +L PLA+EI LA N +Q+ LDK L V HLNAITRIYG+ G ++LELLRK+PAGA+P+ILKRL+QK D EWR+ R L++QW+D+ E+ YHKSLD SFYFK D++A +ALLA + L +A E +A A ++ +DA F LL + + S+++++ ++ F AWL P D A T RAG V T FGEG V ARG T V+L A+G A++ + F N + D AG + ++ Y+ LR++ ++ ++ AR CE A R R +P A LA + + A G YP F+++ + ++ED + ++G+ ++ LF+LDK V L +Q++ +A+D L L+ A L +AY A + Y LQF
Sbjct: 185 VPPRQLRELRVEDALLYLDQVKQQFGDQPDVYNQFLDVMKEFKSQTIDTPGVIQRVSELFKGHPNLIFGFNTFLPPGYRIRPEHLGLYTDPRDRAFNASQGSEPAPVGGLMLRPAPVGASGP---SSSLPS------------------INPPPSQANAPMSNLRPPP---------------------INIAGGGASDPASMLLG-------------QSATPPQPAPSTGAAATPNHRQGDAAKS----KVPAKRSNPPSAPVP-------APQPVEFDHAISYVTTIKKRFADEPETYKAFLEILHTYQKEQGSIKQVLDQVSYLFRDHPDLLREFTFFLPDAVQETARDRLYKVAERAQARQHKLAMAGKDKKAGKKG-----------KDKTGKEAPPTPSSPK---------------KSAEPSKMKTEKESLRDRN------------------------KAAYALKRKQGA------KGDAKDRRELLAVSSTIIDKE-----------------EWSIFEKIKKCLPS---RDNWREFLKCLELYSQEIVGRDDMVVLVKNLLGRHTDVVAEFTQLLHTHGEAKDQH----------------------EIWPFIPLAETDLSQCRRATPSYRALP--------------------ASYPIPPSSSRSKMERLVCNDAWVSVPTGSEDFS-FKNMRKNQYEEALFKCEDERFEIDMVIDANASTIAILMPLAKEIETLAATSPNG-WQYVLDKGALRVTHLNAITRIYGEAGPQILELLRKHPAGAIPVILKRLQQK--------------------DEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLAHAKKLLETKATES-------------------------------IAMAAAKIHKDA-FGLLAYAAEKNLSVSEKEKVSKLWHAFFCPFFALDEAWLQR-KPVLANVTVDQA------TGVRAGTEVVTDFGEGVVQAFDTARGIAT--VQL------AIGTAYVHS---DALSMQEAADFPPNLVVADEAAG---------------AAAVFYGNDTAYVFLRLYHLLHS-----------RLEQARELCEKAKRSRTRRTINPAARA------------------LAHAHHISNDATEQTG--DYPAFISKL----YALIDNSIDNTRYEDCCRSLMGSSSYFLFTLDKLVAQLLKQMQHMANDETCVELQSLF--------AAAPLDKAAYFAQAKAVYEREGEGAYCLQF 1158
BLAST of jgi.p|Trimin1|352335 vs. uniprot
Match: A0A7S2KD73_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KD73_9STRA) HSP 1 Score: 465 bits (1197), Expect = 1.900e-136 Identity = 443/1370 (32.34%), Postives = 599/1370 (43.72%), Query Frame = 1
Query: 82 RELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQRRAHALPSPPSALGPPGGAQRMPGGPMIPGXXXXXXXXXPLRASPQP--TPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFRPVVKLTADGRIPHAIPMVNAAGELVA--------EQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGDKGTRGGAAPAPGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMA-SGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLFGPHQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSNFKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEE----------------IAQLAQHGSNAH---YQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLA-----------AAR---AAEEDGXXXXXXXXXXXTASAAALGAPH----FMSPHMELAYAPRE-VQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWLTAGAPXXXXXXX-------------DDAGARAAQTQYRAG-------------CP------------------VFTAFGEGKVIDARG-DGTHGVELPGCGVIAVGPAHIFRILHE-GPGAYANP-RFEDNEFLDSGAGEGGGEGGEAGVMVPLSESLLLATQELYLLLRVHWMVADSYAYALRAVVAKMAAARHFCEAAALRRARACRHPMKAAGDAAPVXXXXXXXXXXXXLAQSLGLRASALPAEGLCSYPGFLAR--AAXXXXXXXXXXXEALKFEDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQAKPAGALRLSAYRANVGHFLRGRSDDVYRLQ 3897
RELKVEDALLYLDQVK+EFGD+P IYN+FL+IMKNFKAQ +DT GVI+ V LF GYN LILGFNTFLP+GYKIE+ D+E + GP +PG P+R P GAHM XXXXXXXX G G MG F GXXXXXXXXX RGG + PG G P +PM + ++ EFDHAI YVT IKKRF+ P Y FLEILHTYQKEQRGIK+VLEQVS+LFADHPDLLREFT+FLPD VQ+QA+ERL+RAA E+E ++R A L+ + K ++KR G+ S++P P H G P G++ V +G ER FF+ V+ L + S +A+AEF+K +DMY+ EI +R ++L V L G H++LF +FKR+I G D W+S PL+EIDFS+CR+C+PSYRALP+ DYP P CSERS E +VLND WVS+PVGSE+S F+HMRKN EE LFRCED RFEIDM IDS +T++ L + +E IA+ G A +Q+ LD R LGV+H +AI RIYGD G E+L+L KNPA A+P+++ RL+QK D E+R R L+R+W+++ E Y+KS+D R +++ D+RA R L+A+I+D A +AR A EE G T P +PH+ L Y Q+DA+ + A+E S +D++R ++ D + F +W+ + A D+ G+ + + G C V TAFGEGK+++ D + V P G V P IF L P + R DNE D + L++ TQ LYL R+H ++ R +AK ++R C+ LRR H + L P EG Y FL+ + E KFED V+ +LGN+++ L ++DK + + + L+ +A+D ++E++R + K AG+ + SA+R L +++Y Q
Sbjct: 54 RELKVEDALLYLDQVKLEFGDRPRIYNQFLEIMKNFKAQEVDTIGVINSVRKLFHGYNNLILGFNTFLPEGYKIEMRDLEPVFL-------------------------------------GPGLPGTNSTT----PIRPGMMQGKAPMGAHMGGRGMPGPAPAXXXXXXXX-------------GRG-----MGGFPGXXXXXXXXXHPGRGGXXXXXXXXXXXPI-----LQPGRXXXXXXXXMPPGAKPPGMPMQQQSKSAAKPPNQQQHPQRAVEFDHAIMYVTNIKKRFANTPSIYHTFLEILHTYQKEQRGIKEVLEQVSALFADHPDLLREFTFFLPDAVQEQAKERLSRAAAEAEAKQRAA---LEAV------------------------AKDQDKR-----GATGWRTPKGKGPSSAPVP---------------------------ASSTKFIDMTKPHATSPGRTTASPGGQQ------------DAFVYNSGV---------------ERQFFDAVKAVLTSFSRDGQAYAEFIKTLDMYAQEILSRNDLLGYVERLLGKHKDLFEEFKRIINAIG--------------------SPDAPAHDDSWHSVPLSEIDFSRCRRCSPSYRALPR--------------------DYPNPPCSERSKEEAAVLNDVWVSLPVGSEESYTFRHMRKNNEEETLFRCEDMRFEIDMCIDSNATTLQRLVKIYDELQFLSDKEPVTKGSLLIAKKCPEGVGAGGKLFQYTLDGRVLGVIHKHAIRRIYGDDGQEMLDLCYKNPAVAIPIVVNRLRQK--------------------DKEFRAAREVLNRKWKEISELNYYKSIDHRGLTWRATDKRATSTRVLVADIKDRAENDGHEGEAALSARLDKAKEEHGTFYEVTMIDAMTRQMNLNKLPKPTKTIFTPHLSLVYDQNSWAQQDAYRIISFALERSSMNPADKERCYKLWRDFIGPWFELSLSWMQSPAASFTPSPPQEGDTTDNGEDSADEEGSTSEENNIADGNFVKEEIMKPDATCEDSNYFSATSHIAYPPDTLVSTAFGEGKIVNYHEKDSEYEVSYP-SGSQRVRPDAIFCTLSPVEPSLLTDQLRTNDNEVTDR-----------------ADDHLIIGTQYLYLFFRLHQVLVR------RLNIAKDISSR-VCKNTELRR-----HIDR--------------------------LTYEGDPNEGRIRYEAFLSLVYSLVETGTGLNEEPEGAKFEDRVRYLLGNDSYELATMDKLISHILKHLQHMANDETLQNMIEIYR----RHKLAGSFKPSAFREEAA--LMSEGENMYAFQ 1151
BLAST of jgi.p|Trimin1|352335 vs. uniprot
Match: A0A1E7F083_9STRA (HDAC_interact domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F083_9STRA) HSP 1 Score: 462 bits (1190), Expect = 3.170e-136 Identity = 423/1362 (31.06%), Postives = 578/1362 (42.44%), Query Frame = 1
Query: 79 LRELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQRRAHALPSPPSALGPPGGAQRMPGGPMIPGXXXXXXXXXPLRASPQPTPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFRPVVKLTADGRIPHAIPMVNAAGELVAEQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEER----RRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGDKGTRGGAAPAPGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMA--SGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLFGP-HQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTT----DVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSNFKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLA-------------------QHG-SNAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAAA--------------RAAEEDGXXXXXXXXXXXTASA--AALGAP--HFMSPHMELAYAPRE-VQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWLTAGA----------PXXXXXXXD------DAGARAAQTQYR----------------------AGCPVFTAFGEGKVIDARGDGTHGVELPGCGVIAVGPAHIF-RILHEGPGAYANPRFED-NEFLDSGAGEGGGEGGEAGVMVPLSESLLLATQELYLLLRVHWMVADSYAYALRAVVAKMAAARHFCEAAALRRARACRHPMKAAGDAAPVXXXXXXXXXXXXLAQSLGLRASALPAEGLCSYPGFLARAAXXXXXXXXXXXEALKFEDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELWRYQRAQAKPAGALRLSAYRANVGHFLRGRSDDVYRL 3894
+REL+VEDALLYLD VK EFG KP +YNEFL IMKNFK+Q +DTPGVI RVS LFRG N LILGFN FLPDGYKI + D+ +M++ +A R + PPS + P Q L+ QP Q M EQ +P XXXXXXX R D + P + Q EFDHAISYVTTIK+RF+ + TY +FLEILHTYQKEQRGIK+VLEQV+ LF DHPDLL+EFT+FLPD VQ+QA+ERL+RAA ESE R + + + QLQ G + + + ++R Y +D +P + Q P N A ER FF+ +E L + G +AWAEF+KC+DMY+ EI +R EML V L G + +LF +FKR++ G G T D WYS PL+EIDFS+CR+C+PSYRALP+ DYP P CS+RS E VLND WVS+PVGSE+S F+HMR+N YEE LFR EDERFEIDM IDS T+ LLEP A+E+AQL+ Q G +++ D LGV+H N+ITRIYGD G E+LELL+ NP+ A+P+++ RL+QK D EW++ R L+R W+++ E Y+KSLD RS +++ D+RA +R LL +I+D AA +A EE G + L P +P M L Y VQ+DA+ L A+E GS + +D++R R+ + L F W+ A P XXD + +R R AG V T +GEG+++ R D + V+L G + P+ + +L AY R +D N LD ++ L++ TQ LYL R+H ++ CR G A + L + + + + A G Y FL+ E KFED V+ +LG+ + L ++DK + + + ++++A+D L++L+R + AG + A+R + G ++L
Sbjct: 1 MRELRVEDALLYLDDVKREFGGKPRVYNEFLAIMKNFKSQEVDTPGVIARVSKLFRGNNHLILGFNKFLPDGYKISMEDLRQMDQAYA-----------REEEIQLPPSHMAGPLSQQ--------------------LQQQHQPPIQDVQMKQAQANRQRMQVATDLQ------------EQQXXXXXIPXXXXXX----XXXXXXXXXRKVHDVI----------------------PPXXXXXXXXXXXXXXXXXIQQQNQPHQAVEFDHAISYVTTIKRRFANDQSTYHSFLEILHTYQKEQRGIKEVLEQVAHLFQDHPDLLKEFTFFLPDAVQEQAKERLHRAAAESESRLSAQKDKKNKQLQ--------GSSKEIVDMTEHPIPVDQTEARGQKR------------YHKDVQEAPV-------------------------------------VITYPQ------------------------TPETFVYNSAV--------------ERQFFDAAKEALASYTRDGGQAWAEFMKCLDMYAQEILSRSEMLNFVEPLLGKRNNKLFEEFKRILAAAG---------------------GQGTNTVPSMEDSWYSVPLSEIDFSRCRRCSPSYRALPR--------------------DYPAPPCSKRSDEERMVLNDVWVSLPVGSEESYTFRHMRRNTYEETLFRVEDERFEIDMTIDSNLCTLALLEPFAQEMAQLSGNDGQMQIDKENESKTNMEQKGLGGKRFRYTFDPTILGVIHRNSITRIYGDAGEEMLELLKTNPSVAIPIVVDRLRQK--------------------DVEWQKVRDRLNRHWKEMAENNYYKSLDHRSLTWRTTDKRAISNRTLLTDIKDRAANDGSESEAALQVRIDKAKEEHGLFFEVTMGNAFLQKIDLSVLPKPDRRLFTPDMSLMYEDTAWVQKDAYRILSFALERGSISPTDKERCHRLWTEFLGPWFDLNLNWMLTPAVNFQETKTSSPEEDEEXXDSLDEEGEINSRIVTETVRDDEHDCDDDCDSPTHMDHHPLPAGSTVTTIYGEGRIMSCRTD-IYVVKLA-FGTAYLRPSAVLCSVLAAEKSAYTTQRMDDDNTKLDR-----------------PNDKLMIGTQSLYLFFRLHQIL--------------------------------CRR----IGIARKLAFEVKNDPSLQTLVEQMPGQYGSGAAAGKRRYDAFLSLVYALLDGGTGGAAEGGKFEDRVRSLLGHGGYELATMDKLISHILKNIQSMANDDTMWSLVQLFR----RHLDAGGFKPEAFRQEAAYLSDGEHMYAFQL 1078
BLAST of jgi.p|Trimin1|352335 vs. uniprot
Match: T0RRZ2_SAPDV (HDAC_interact domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RRZ2_SAPDV) HSP 1 Score: 467 bits (1201), Expect = 4.840e-136 Identity = 415/1245 (33.33%), Postives = 556/1245 (44.66%), Query Frame = 1
Query: 73 RPLRELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQRRAHALPSPPSALGPPGGAQRMPGGPMIPGXXXXXXXXXPLRASPQPTPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFRPVVKLTADGRIPHAIPMVNAAGELVAEQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGDKGTRGGAAPAPGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMASGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLFGPHQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSNFKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQHGSNAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAAARAAEEDGXXXXXXXXXXXTASAAALGAPHFMSPHMELAYAPREVQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWLTAGAPXXXXXXXDDAGARAAQTQYRAGCPVFTAFGEGKV--IDA-RGDGTHGVELPGCGVIAVGPAHI----FRILHEGPGAYANPRFEDNEFLDSGAGEGGGEGGEAGVMVPLSESLLLATQELYLLLRVHWMVADSYAYALRAVVAKMAAARHFCEAAALRRARACRHPMKAAGDAAPVXXXXXXXXXXXXLAQSLGLRASALPAEGLCSYPGFLARAAXXXXXXXXXXXEALKFEDYVQGVLGNEAFALFSLDKQVQTLARQLKAVADDPMSSRLLELW 3786
RPLREL+VEDALLYLDQVK +FGD+P++YN+FLD+MK FK+Q IDTPGVI RVS LF+G+ LI GFNTFLP GY+I + + A R +PP G P P G ++ LR +P T G + LG+ P + + G + D+M + A V T+P + K +P A QP EFDHAISYVTTIKKRF+ EP+TYKAFLEILHTYQKEQ IK VL+QVS LF DHPDLLREFT+FLPD VQDQAR+RL++AA+ ++ R+ + M KEK+ G+ + +P + S XXXXXXXXX ++RR A + + + E S FE +++ L + R+ W EFLKC+++YS EI R +M+ LV +L G H ++ A+F +L+ G ++W PLAE D SQCR+ TPSYRALP YP P S RS ME +V ND WVSVP GSED S FK+MRKNQYEEALF+CEDERFEIDMVID+ STI +L PLA+EI LA S +Q+ LDK L V HLNAITRIYG+ G ++LELLRK+PAGA+P+ILKRL QK D EWR+ R L++QW+D+ E+ YHKSLD SFYFK D++A +ALLA + + E AL P ++ +DA F LL + + S+++++ ++ F AWL P D R G V T FGEG V DA R T V LP +G A++ + G ++ E LD+ + S+ Y+ LR++ ++ ++ AR CE A R R +P A LA + L+ A G Y FL++ + +FED + ++G+ ++ LF+LDK VQ L +Q++ +A+D S L L+
Sbjct: 197 RPLRELRVEDALLYLDQVKQQFGDQPDVYNQFLDVMKEFKSQTIDTPGVIQRVSELFKGHPNLIFGFNTFLPPGYRIRPEHLGLYS------------ADPRDRGFSAPPGNDGNPA-----PMGGLV------------LRPAPSATGNGPASSLPSINPPTQSSNAPL---------------SNLGIRPPPVNIPGG----------NSASNTDQMLV----APVPSAANTTPSHRLTDAAKKA----VPAKRGGAPATPAPAPPQPVEFDHAISYVTTIKKRFADEPETYKAFLEILHTYQKEQGSIKQVLDQVSYLFRDHPDLLREFTFFLPDAVQDQARDRLHKAAERAQARQLKLQM-----------------------------TSGKEKK-------------VGKKKDKKESPPQVASPKXXXXXXXXXXXXXXXRNKAAYALKRKQANKGDAKERREL-----------------LAVSNTLIDKE-----------------EWSIFEKIKKCLPS---RDNWREFLKCLELYSQEIVGRDDMIVLVKNLLGRHTDVVAEFTQLLHTHGEVKDQH----------------------EIWPFIPLAETDLSQCRRATPSYRALPSS--------------------YPIPPSSSRSKMERAVCNDAWVSVPTGSEDFS-FKNMRKNQYEEALFKCEDERFEIDMVIDANASTIAILTPLAKEIETLAAT-SPTGWQYVLDKGALRVTHLNAITRIYGEAGHQILELLRKHPAGAIPVILKRLLQK--------------------DEEWRRARQDLNKQWKDVNEKNYHKSLDHSSFYFKQKDKKATSAKALLAHAKKTLETKTVE-------------------ALTMP------------AAKIHKDA-FGLLTYAAEKNLSVSEKEKVSKLWHSFFCPFFHLDEAWLQR-KPVLANVTVDSTNG------VRVGTEVVTDFGEGVVQAFDAARSIAT--VTLP------IGTAYVHSDALSVTEVGDFPPNIGVADEAENLDA------------------ASSVFYGNDTAYVFLRLYQLLHS-----------RLEQARELCEKAKRNRNRRTINPAARA------------------LAHAHHLQNEAPEMTG--DYSAFLSKL----YALLDNSIDNTRFEDCCRSLMGSSSYFLFTLDKLVQHLLKQMQHMANDETCSELQSLF 1136
BLAST of jgi.p|Trimin1|352335 vs. uniprot
Match: K0TF38_THAOC (HDAC_interact domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TF38_THAOC) HSP 1 Score: 461 bits (1187), Expect = 5.980e-133 Identity = 375/1006 (37.28%), Postives = 488/1006 (48.51%), Query Frame = 1
Query: 82 RELKVEDALLYLDQVKMEFGDKPEIYNEFLDIMKNFKAQAIDTPGVIDRVSTLFRGYNKLILGFNTFLPDGYKIELSDIEEMNRVHAAKVAAQAEAQRRAHALPSPPSALGP--PGGAQRMPGGPMIPGXXXXXXXXXPLRASPQPTPQGAHMXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEQAGLGLLMPQMGMFSGXXXXXXXXXXDMRGGADKMAMPRPGAQVQGMGRTSPGAQFRPVVKLTADGRIPHAIPMVNAAGELVAEQPAEFDHAISYVTTIKKRFSTEPQTYKAFLEILHTYQKEQRGIKDVLEQVSSLFADHPDLLREFTYFLPDPVQDQARERLNRAAQESEERRRRADMQLQNMGMGFNGGRGXXXXXXXXXXXXGPRVKPKEKRRKGDKDXXXXXXDYGRDRSASPAPDRCGSVSVGSRGGXXXXXXXXXXXXXXXXXXXXXXXXAQHEQRRGSGAPGPSGRKGDKGTRGGAAP--APGKVPRNGAXXXXXXXXPAPRPDPERSFFEFVRETLMA-SGGREAWAEFLKCVDMYSAEIFTRREMLQLVADLFGPHQELFADFKRLIEGGGIAXXXXXXXXXXXXXXXXXXXXXGALTTDVWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSNFKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEI-----AQLAQHGSNAH--------------YQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAA--------------ARAAEEDGXXXXXXXXXXXTASAAALG-------APHFMSPHMELAYAPRE-VQRDAHFALLRAVEAGSYAASDRDRMRRICVDALPDLFGWGAAWL 2961
RELKVEDALLYLD+VK EFG++P IYNEFLDIMK FKAQ +DT GVI+RV TLFRGYNKLILGFNTFLP+GYKIE+ D+ + A Q P +GP PG +P G XXXXXXXXX PQ + QG + +Q G G + + + XXXXXXXXXX + P P G G Q P ++ + +AA A + EFDHAI YVT IKKRF+++P+TY FLEILHTYQKEQRGIK+VLEQVSSLFADHPDLLREFT+FLPD VQ+QA+ERL+RAA E+E + + + +P R G + GG Q +Q P P + A+P APGK+P + ER FF+ V+ L + S +A+AEF+K +DMY+ EI +R +ML V L G H++LF +FK +I G D W+S PL EIDFS+CRKC+PSYRALP+ DYP P CSERS E VLND WVS+PVGSE+S F+HMRKNQ+EE LFR ED RFEIDM +DS +T++ L + +E+ ++++ GS++ YQ+ LD R LG++H +AI RIYGD G E+L+L KNPA A+P+++ RL+QK D E+R+ RS L+R+W+DL E Y+KSLD RS +++ D+RA R ++AEI+D AA +A EE G + S P +PHM Y Q+DA + A+E GS D++R R+ + FG AW+
Sbjct: 307 RELKVEDALLYLDEVKNEFGERPRIYNEFLDIMKCFKAQEVDTIGVINRVKTLFRGYNKLILGFNTFLPEGYKIEMRDL--------GRGAGQE------------PVFIGPGLPGNNTTIPIGSAA--XXXXXXXXXXXXXXPQLSTQGRFLAGKPPAAAAP-------------------QQGGRGAGRGRGVLQTSXXXXXXXXXXXXXXXXGQQPPPPPA----GRGAQPRQIQGGPNPLTPRQQQVQQDLAQGSAAA---AAKTVEFDHAIMYVTNIKKRFASQPRTYHTFLEILHTYQKEQRGIKEVLEQVSSLFADHPDLLREFTFFLPDAVQEQAKERLSRAAAEAEAKXXXXXXXXXXXXQSAH-----------------------------------------QPMRGAPTGWRTGGKKPDAVGGSGTKFIDM----------------TQPDQ------PLPDAK---------ASPNRAPGKLPTDTYVYNAGV---------ERQFFDNVKAALTSFSRDGQAYAEFIKSLDMYAQEILSRADMLGYVERLLGKHKDLFEEFKNIIHAVG--------------------SPDAPTHDDSWHSVPLTEIDFSRCRKCSPSYRALPR--------------------DYPDPPCSERSVAETKVLNDIWVSLPVGSEESYTFRHMRKNQFEETLFRLEDMRFEIDMCLDSNATTLQRLTMIYDELQFLSESEISASGSSSFIKSQRDGAGLGGKIYQYALDGRVLGIIHKHAIRRIYGDEGQEMLDLCYKNPAVAIPIVVNRLRQK--------------------DAEFREARSQLNRKWKDLTELNYYKSLDHRSITWRTTDKRATSTRTIVAEIKDRAANDGCEGDAALNARMEKAKEEHGTFYEVTMGCSDSFSGKQTDLSNLPKPTPTIFTPHMSFFYDGNSWAQKDAFHLISFALEKGSTNTVDKERCARLWRQFVGQWFGLSMAWM 1123 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352335 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11703 ID=mRNA_11703|Name=jgi.p|Trimin1|352335|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5104bp|location=Sequence derived from alignment at Contig_115:469711..483807- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGAATGGGCGATGGCCAGGGCCAGCCCGGACAGGGTCCTCCAGGCAAback to top protein sequence of jgi.p|Trimin1|352335 >Trimin1|352335|estExt_Genemark1.C_Ctg_1150064 ID=Trimin1|352335|estExt_Genemark1.C_Ctg_1150064|Name=jgi.p|Trimin1|352335|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1520bp MGMGDGQGQPGQGPPGNRPPPIAGRPLRELKVEDALLYLDQVKMEFGDKPback to top mRNA from alignment at Contig_115:469711..483807- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11703 ID=mRNA_11703|Name=jgi.p|Trimin1|352335|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=14097bp|location=Sequence derived from alignment at Contig_115:469711..483807- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_115:469711..483807- >mRNA_11703 ID=mRNA_11703|Name=jgi.p|Trimin1|352335|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=4560bp|location=Sequence derived from alignment at Contig_115:469711..483807- (Tribonema minus UTEX_B_3156 )back to top |