mRNA_11668 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352318
Unique Name	mRNA_11668
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352318 vs. uniprot
Match: A0A835ZFW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW6_9STRA)

HSP 1 Score: 337 bits (864), Expect = 5.810e-103
Identity = 616/616 (100.00%), Postives = 616/616 (100.00%), Query Frame = 1

Query:    1 MVILYLEVDVCKGHGVQAFAKGDKRSGFGAYFRANGDSYKGTWNEGMMHGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFRCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGEQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGQHLLELWCRGTRMKRCNVTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELALVPAXXXXXXXAAPLLPRPMHFVRFMEWECRQREAHAAGRGPXXXXXXXXXTHTAVAAGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDDVDXXXXXXXXXXXXXXXXXXXXXXXXXXXEADYGANADAGGAAXXXXXGWGGPYMGVAGPRGFGAEVLGSSGXXXXXXXXXXLGGGEVMGALXXXXXXMLAAPGGLAAFAAAPDAANFMFAAVAPAFGEPGIAGAAAAAEMWEADVIDDE 1848
            MVILYLEVDVCKGHGVQAFAKGDKRSGFGAYFRANGDSYKGTWNEGMMHGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFRCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGEQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGQHLLELWCRGTRMKRCNVTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELALVPAXXXXXXXAAPLLPRPMHFVRFMEWECRQREAHAAGRGPXXXXXXXXXTHTAVAAGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDDVDXXXXXXXXXXXXXXXXXXXXXXXXXXXEADYGANADAGGAAXXXXXGWGGPYMGVAGPRGFGAEVLGSSGXXXXXXXXXXLGGGEVMGALXXXXXXMLAAPGGLAAFAAAPDAANFMFAAVAPAFGEPGIAGAAAAAEMWEADVIDDE
Sbjct:    1 MVILYLEVDVCKGHGVQAFAKGDKRSGFGAYFRANGDSYKGTWNEGMMHGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFRCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLGEQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGDGQHLLELWCRGTRMKRCNVTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELALVPAXXXXXXXAAPLLPRPMHFVRFMEWECRQREAHAAGRGPXXXXXXXXXTHTAVAAGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVDDVDXXXXXXXXXXXXXXXXXXXXXXXXXXXEADYGANADAGGAAXXXXXGWGGPYMGVAGPRGFGAEVLGSSGXXXXXXXXXXLGGGEVMGALXXXXXXMLAAPGGLAAFAAAPDAANFMFAAVAPAFGEPGIAGAAAAAEMWEADVIDDE 616

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352318 vs. uniprot

BLAST of jgi.p|Trimin1|352318 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZFW6_9STRA	5.810e-103	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_115	contig	Contig_115:230190..238103 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352318\|estExt_Genemark1.C_Ctg_1150036
Hectar predicted targeting category	other localisation
TranscriptId	352640
Track	FilteredModels1
ProteinId	352318

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352318	gene_11668	Tribonema minus UTEX_B_3156	gene	Contig_115 230190..238103 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352318	Trimin1\|352318\|estExt_Genemark1.C_Ctg_1150036	Tribonema minus UTEX_B_3156	polypeptide	Contig_115 230484..238103 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11668_8	exon_11668_8	Tribonema minus UTEX_B_3156	exon	Contig_115 230190..231592 -
exon_11668_7	exon_11668_7	Tribonema minus UTEX_B_3156	exon	Contig_115 232563..232643 -
exon_11668_6	exon_11668_6	Tribonema minus UTEX_B_3156	exon	Contig_115 233560..233697 -
exon_11668_5	exon_11668_5	Tribonema minus UTEX_B_3156	exon	Contig_115 234618..234755 -
exon_11668_4	exon_11668_4	Tribonema minus UTEX_B_3156	exon	Contig_115 236059..236197 -
exon_11668_3	exon_11668_3	Tribonema minus UTEX_B_3156	exon	Contig_115 236956..237065 -
exon_11668_2	exon_11668_2	Tribonema minus UTEX_B_3156	exon	Contig_115 237474..237511 -
exon_11668_1	exon_11668_1	Tribonema minus UTEX_B_3156	exon	Contig_115 238006..238103 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_11668	UTR3_11668	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_115 230190..230483 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11668	CDS_11668	Tribonema minus UTEX_B_3156	CDS	Contig_115 238006..238103 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_115:230190..238103-
coding sequence from alignment at Contig_115:230190..238103-

spliced messenger RNA

>mRNA_11668 ID=mRNA_11668|Name=jgi.p|Trimin1|352318|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2145bp|location=Sequence derived from alignment at Contig_115:230190..238103- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTAATTCTATACCTTGAAGTAGATGTTTGCAAGGGGCACGGCGTTCA
GGCCTTTGCCAAGGGCGACAAGCGCAGCGGCTTCGGCGCGTACTTCCGGG
CCAACGGCGACAGCTACAAGGGCACGTGGAACGAAGGCATGATGCACGGT
CAGGGCACCTTCATGTGGGCGAAGGGGGACCTGTATGAAGGCGAGTGGCG
CGCCGGCAAGATGCACGGCCAGGGCACAAAGAAAATGGCAAATGGGGATG
TGTATATGGGGGAGTGGCGCTGCGGCATGGCACATGGCTGGGGGCGTAAG
AAGTTCCGCTGCGGCGACCTGCACGAGGGCCAGTACAAAGAGGACAAGAG
GTCGGGGTTCGGGATCTATGTGTGGGTGAACGGCGATCGCTACGAGGGCG
ACTGGTCCAACGGGCGCATGCACGGCAAGGGCGTCAAGATGATGGCCAAC
GGCGACGTGTACAACGGCCTCTGGGTCAGCGACAAGGCGGAGGGCATGGG
CGTCAAGATCTTTGCCTGCGGAGACCGCCACGACGGCGAGTACAAGGAGG
ACAAGCGGCACGGCTACGGCGTGTACACGTGGCAGACAGGGGACCGCTAC
GAGGGATACTGGCTCGAGGGGCGCATGAGCGGCAAGGGCGTCAAGTACAT
GGCCAACGGAGACGTGTTTGACGGCGAGTGGGTCGACGACAAGGCACACG
GCTGGGGCATGAAGGCCTTTGCCAATGGCGACCAGCACGAAGGCGCCTAC
GCGCACGACCTGCGCCAGGGCGAGGGCGCGTACCACTGGGCGAACGGCGA
CGCGTACAGCGGCGACTGGGACCTCGGCGAGCAGTCCGGCTACGGGCGCT
ACTGCTACGCCGCGGGCTGCGCGTACGAGGGCGTCTGGGACCAGGGCCGC
AAGCACGGCAGCGGCTACTTCACGGCCGGCGACGGGCAGCACCTGCTCGA
GCTGTGGTGCCGCGGCACGCGCATGAAGCGCTGCAACGTCACCGCCGCCG
CCGCCGCGGCCGCCGCCGCCAGCGCCGACGTCGCGGACGGCGACGACGCC
GCCGCTGCGGAGGACGCCGCTGGCGGCGCGGCGGCAGCAGCGGCGGCGCT
GGCGGAGAACGAGCTGGCGCTGGTGCCGGCGGACAACGACGGCGGCGGCG
GCGCCGCGCCACTGCTGCCGCGCCCGATGCACTTTGTGCGCTTCATGGAG
TGGGAGTGTCGGCAGCGCGAGGCGCACGCCGCGGGGCGCGGGCCGCCGCC
GCCGAGCGCGTCGTGGCTGTGGACGCATACTGCCGTCGCCGCCGGCGCGG
ACGACGACGCGGCGGCGGCGCCGCCACCGCTCACCGCCGCTGCGGCGGCG
CTGGCGCTGGCGGCGGCGGCAGCGGCGGATGGCGATGCCGTAGACGACGT
GGACGAAGAGGACATGGGAGCGGCAGCGGAAGAGGAGGAGGCGGCGGCGG
CGGCGGCGCCGCTGGTGGGCGGCGGTGGCGGTGGCGAGGCTGATTACGGC
GCCAATGCGGACGCCGGCGGCGCTGCTGGCGTTGGCGGCGGCGGCTGGGG
CGGCCCCTACATGGGTGTCGCCGGCCCACGGGGATTTGGGGCGGAAGTGC
TCGGCAGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGCGGCGGGCTCGGC
GGCGGGGAGGTCATGGGCGCGCTCGGCGTCGGCGGCGGCGGCATGCTCGC
AGCACCCGGCGGCTTGGCGGCATTTGCCGCGGCGCCAGATGCTGCCAACT
TCATGTTTGCGGCCGTAGCGCCGGCTTTCGGCGAGCCGGGTATTGCCGGC
GCCGCCGCTGCCGCTGAGATGTGGGAAGCAGACGTCATCGACGATGAGTA
GGCACGGGGGTGCGCGAGCGCGGCAGCTGCGCAAATGTACACGACAATGA
CGGTCCTGCCCCTCCGGGAAGGCGAGCGCAGATGTGCAGCAGAGCAGCGC
CACGGGGTGCGGAGGCGCCCTGTGGCGGGTCGCAGATCACGACCGTTGCA
ATTGCCGCCCTCTGTACCAAAATCCACGCGCGCTGTACAGCTGCAGTTCC
GCGCGCGTGCCTGCGGGCACGCCGCCCCCGCATATTGTCCCGCCAGCCCG
CTTGCTGGCGCGAAATAGACGCCGCCGCCGCTATGGCGTAGCCGC

protein sequence of jgi.p|Trimin1|352318

>Trimin1|352318|estExt_Genemark1.C_Ctg_1150036 ID=Trimin1|352318|estExt_Genemark1.C_Ctg_1150036|Name=jgi.p|Trimin1|352318|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=617bp
MVILYLEVDVCKGHGVQAFAKGDKRSGFGAYFRANGDSYKGTWNEGMMHG
QGTFMWAKGDLYEGEWRAGKMHGQGTKKMANGDVYMGEWRCGMAHGWGRK
KFRCGDLHEGQYKEDKRSGFGIYVWVNGDRYEGDWSNGRMHGKGVKMMAN
GDVYNGLWVSDKAEGMGVKIFACGDRHDGEYKEDKRHGYGVYTWQTGDRY
EGYWLEGRMSGKGVKYMANGDVFDGEWVDDKAHGWGMKAFANGDQHEGAY
AHDLRQGEGAYHWANGDAYSGDWDLGEQSGYGRYCYAAGCAYEGVWDQGR
KHGSGYFTAGDGQHLLELWCRGTRMKRCNVTAAAAAAAAASADVADGDDA
AAAEDAAGGAAAAAAALAENELALVPADNDGGGGAAPLLPRPMHFVRFME
WECRQREAHAAGRGPPPPSASWLWTHTAVAAGADDDAAAAPPPLTAAAAA
LALAAAAAADGDAVDDVDEEDMGAAAEEEEAAAAAAPLVGGGGGGEADYG
ANADAGGAAGVGGGGWGGPYMGVAGPRGFGAEVLGSSGGGGGGSSGGGLG
GGEVMGALGVGGGGMLAAPGGLAAFAAAPDAANFMFAAVAPAFGEPGIAG
AAAAAEMWEADVIDDE*

mRNA from alignment at Contig_115:230190..238103-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11668 ID=mRNA_11668|Name=jgi.p|Trimin1|352318|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7914bp|location=Sequence derived from alignment at Contig_115:230190..238103- (Tribonema minus UTEX_B_3156 )
ATGGTAATTCTATACCTTGAAGTAGATGTTTGCAAGGGGCACGGCGTTCA
GGCCTTTGCCAAGGGCGACAAGCGCAGCGGCTTCGGCGCGTACTTCCGGT
GAGCGCCGCTGCCGCCCTGACCCTATATATTCCTGATGGTAACCCTAGGT
GCGGAGGGGCGCGGCGTGGAGCACTTTGTCCCCGGGTCGATAAGCACTAG
GGGTCGCGCGCGTGCGGAGACCGGCAACCGCTTGCAGTCAAATAGGGTGA
TGGCCCCCTAGCGTCGTCGCACCATTGGTTGTTGCGAACGCGCGCAGACG
TTGCGATGGCCTTCGCGAGCGCGCTCCACAGCACCGCAGCGCCGCGGGGG
CAGGCGCCGCGCGCGCCGCCAGCAAATTTTGGCGCGCTGCCGCTGAGCAC
TGATGCGTGTTGAGCGCTGCCCCCGGGGGTGTGATGCTGAGCGCTGATGC
CTGTTGAGCGCTGCCCCCTAGTACCGCCGAGCGCTGCCACCATGCTGCGC
TGCCTCTGGGTACTGTTGAGCGCTGCCATCGACACTGACGCATGCACACC
TTTGCTGCCCTTTGCTGCCCCCCCCCTTCCCCCCCCCGCCAGGGCCAACG
GCGACAGCTACAAGGGCACGTGGAACGAAGGTACGGGCTCACGAGTAATA
TGCCAGAATGAGCGTTGTAGTGCAAAGTGCGGCGTCAGTTGTGTGCCCGC
CCGCCCACGCCATATTGTGTTTCAGTTGCGCCACCGCGTCTGCCGCCGCC
GCCGTGCCGCGTTGCGACGTCAGTGCGCCGCCGCCGCAGCCTTGTGCGGT
GTGCGGTTGAGCCCTGCGGTTGCCCATTCACCTACCCCTTTAGCCATCCC
CTGTGTACAAGTGCATGCCTGCTCACCTTGATCTGAATTTCAGAGAGCAC
CTGGGCTTCGATCACGTGCTGACTTAGGGTTAGGGTTAGGGTTAGGGTTA
GGCTGCTCCCCCTCCTGCGCCCCCTTAACGCCCCAAACCTATCTCTCCCT
CCTCAACTCATCCCAGCTCGCCCCCTCTTCCCCTGCAGGCATGATGCACG
GTCAGGGCACCTTCATGTGGGCGAAGGGGGACCTGTATGAAGGCGAGTGG
CGCGCCGGCAAGATGCACGGCCAGGGCACAAAGAAAATGGCAAATGGGGT
GAGTCAAGCGCAAGCGCCCCCCTGTGCACCCCCCTTTTTTGTGCTCAACT
GGCACCTTTCTCCCCCCCTCCCCCCCCCGATGTGGGTACAGTACGTGCGT
GCGCTGCCGATCGCTTTGCATAGCCACCGCTGAGATTGCGTACGGTACTG
CACGCCACGCACACTCTCCTCATTCCTGGCGTGTGCTGTTCAGCACGCAT
CGTGCCTCACTGTGCCCTCCGCGCCCCATTGTGCCTTCACTGCGCCTCAT
TGCGTCTTCCCTGGCCCCATCAGGATGTCTATACGGGTTGTGCCCTGTGC
ATCTGATTGTGCCCTCACTGTGCCTCATTGCGCCTTCCCTGGCCCAATCA
GGATTTGTATATTGGGGAAGTGGCGCTGTGGCATGGCGCACAGGGTGGTT
TCTCGCTGCGTGTTTGCGCCGCTACTAGTGCTGCGTTGAGTGCCCCCCCT
TGTTCCTCGACGTGTTGGTCAGCCGACACTGTCCTCAATGTGCCCTTGGC
GTCTCATTGTGCCTTCGTTGCGCCTTCATCGCCCCCACATCAGGATTTGT
ATATGGGGGAGTGGCGGTGCGGTATAGCGCACAGGGTGGATTCTCGCTGC
GAGCTTACGTCGCCGCTTGCTGAGGTCGCATCCGATGCTATACGCCTTGT
ACACTCTCCTTGGTCCTCAGCGTGTGCTGTTCAGCCCACATTGTGCCTCA
ATGTGCTCTTCGCACCCCATTGTGCCTTCGTTGTGCCTTCATCGCCCCCA
AATCAGGATGTGTATATGGGGGAGTGGCGCTGCGGCATGGCACATGGCTG
GGGGCGTAAGAAGTTCCGCTGCGGCGACCTGCACGAGGGCCAGTACAAAG
AGGACAAGAGGTCGGGGTTCGGGATCTATGTGTGGGTGAACGGCGGTGAG
TGCAGTGTATTGCAGTGCAGTGTACTGTGAGACGAAGCGATGATGAACAT
GTTTGGGTGCCACTGTATGTGCTATTTCTGGTCACTGTTGCAAAGGGCAG
CTGGAACTGTGTGGACTAACAAGTTAAGCGCACCGGTCTGCATCAGTTGT
TTGATTGTGTGCTTAATTCATGCACTTGTCAAGAGTGGGAACTTCCACTT
CAACACATGGTGCGTCAGTGCTCACTGCTCCGCGCTGGCAATGCTGCAGA
CCGACGTGACCGGTGCAGCGGACGGACGCACGGCAAGTCAGGGTTGGGTT
AGGGTTAGGGTTAGGGTTAGGGTCGAGTGACGGCCGCTGGTGCAGTGCGG
GATGTGAACGCGCACTACGAAAGTAGGGGCACGCTTTTTGCGGCGGCCGT
GCTGCCGCAGATAGACTTGAGGCACAAGTTAAGCGCACCGGTCTGCATCA
GTTGTTTGATTGTGTGCTAATTCATGCACTTGTCAAGAGTGGGAACTTCC
ACTTCAACACATGGTGCGTCAGTGCTCACTGCTCCGCGCTGGCAATGCTG
CAGACCGACGTGACCGGTGCAGCGGACGGACGCACGGCAAGTCAGGGTTG
GGTTAGGGTTAGGGTTAGGGTTAGGGTCGAGTGACGGCCGCTGGTGCAGT
GCGGGATGTGAACGCGCACTACGAAAGTAGGGGCACGCTTTTTGCGGCGG
CCGTGCTGCCGCAGATAGACTTGAGGCACACAGTAAACTGTGGCAATGCA
CTCATAACGCATGTGAAAACGCGCCAATCACGACGGCCGTGCGCTGCCGC
AGGGTGGACTTGAAGTTAATATGAGCGAACGTGGAATCTAACAACGCACT
AACTACAACGATCGTGCCGCCGCAGATGCAAGTGAGGTTGATCCAACGTG
GGTTGTGAGAACGCACTCATCACGAATGTGAACATTCATTTATTGTGATG
GCTGAGCGCTGCCGCAGATCGCTAGGAGGGCGACTGGTCCAACGTGGGAT
GTGAAAACGCATCCGCCACGCATGTGACAACGCAATGATAACGCTGGCCG
TGTGCTGCCGCGGGATGGACTTGAAGTTGATCAGAGCGACGTGGATCGTG
ACAACGCACTCGTCACGAGTGTGACAAAGCGCTGATTGCGATGGCTGTGC
CGCCGTAGCCGCAATATTGAGGTTGATCCAACATGAGATGCGAAAACGCA
CTCATCGCACATGTTCAAACGCACTCATCACACATGTGAAATCGCAATCA
CTACGAATGCGAACATTGATTGATTGTGAATGCTGAGCGCTGCTGCAGAT
CGCTACGAGGGCGACTGGTCCAACGGGCGCATGCACGGCAAGGGCGTCAA
GATGATGGCCAACGGCGACGTGTACAACGGCCTCTGGGTCAGCGACAAGG
CGGAGGGCATGGGCGTCAAGATCTTTGCCTGCGGAGGTATGTATATATGG
TATGGGGGTAGGTTAGGGTTGGTTAGCGAGCGGAGGTATGTATATATGGT
ATGGGGGTAGGTTAGGGCTGGTTAGCGATAAGGCGGAGGGCATGGGCGTC
AAAGACCTTTGCCTGCGGAGGTATGCATGTATGAAAACGATTCAAAAGAT
CGTAGAGCTCTAGGTGGCAAGGAGTGGTTAGCAGCAACTGCCTTCCACCA
ATTACTGTGGTCGCCGCTGCTGCAGTCATTGGCCACGAGTCAGACAGTGC
CACCATGTATGGCATGGGGGCAGGTTAGGGTTGCAGTTAGGGTTGCTGGA
TTTAGGGTTAGAGGGCCTGCGTGGAGCAGGCACTGCAGGTGTTGAAGTTG
ATGCAGGCGGGTCGCGACTATGTCAGGAGAAAACATCAACATCTACCACC
ACAAACTTGAAGTTAGAGGCGCAAGCGAGACATCTTCACATTGCGTAGGC
AGACTCGCGTGTGCATGTGTGTGTGGGGGGGGAGGGGGGGCACGTGCCTC
TACGCTCACAGATCTGTGGTGACAGCTGGCTTGCCCCGCACTGACGCGCA
TGTTGGCGTCTCCGTCAGTTGTGTGTTCTTAATGTCACGGCAAGGTGTCC
AGTAGCGTGCACGTCTCTGTGATAAGGTGTAGTGCCTCGCCGCCCCTTAA
ACCCTAGATGACTGTCGCCACCGAAACCCTACGTGAGCGTCACCGCCTGA
AGCTGAAGTGACATTCCTTCATAATCAGCCATTTGTACAGCACGCGGCAA
TGCCGTGGTGTTCCGCAAAACTTAAGCATGGTCATGGTAATTTTCAAGGC
TGATGTGTCATGGTCGCCACGTTAGCCTCTCAACAGCTCCATTGCGTCTC
TGTGTTGCTCATGATCGCTTACCCTAACCCTAGCCCTCGTTGCGGCCGCG
GCGCAGACCGCCACGACGGCGAGTACAAGGAGGACAAGCGGCACGGCTAC
GGCGTGTACACGTGGCAGACAGGGGACCGCTACGAGGGATACTGGCTCGA
GGGGCGCATGAGCGGCAAGGGCGTCAAGTACATGGCCAACGGAGGTGAGA
GACCCCCTATTCACCCCTCTCAAGCCTCCCCTCACAGGCCCCCGGTAGCC
CTTCGATCATGCATGAGTGGCTACTGGCTCGAGGGGCGCATGAGCGGCAA
GGGTGTCAAGTACATGGCCAACGGAGGTGAGAGACCGCCCTACACCCCAC
TGCACTCCTCCTAGAGCCCCAAGTGTCCCCAGTAGCCCCCCCTCAAGAGC
CTCTGCCAGCTCCCGCCTTCGATTCTGCACAAGGTAGGTGCAAGCAGCTT
GCTGCGCTGGCTACTGGCTCGAGGGGCGTATGAGCGGCAAGGGCGTCAAA
CACATGGCCAACGCAGGTGAGAGCCCTGCGGACCCCTCCAATGCCCCCAG
TAACCCCCCCTTTGAGAGCCTCTGCCAGCTCCCCCTTTCGATACTACATG
GGCTACTGACTGGAGGGGCGTATGAGCGTCAAGGGCGTCAGGTACATGGC
CAATGAGGTGAGAGACCCTCTGTCCACCCCCCCCCCAAAGCCTCGTCGAC
AGCCCCTCCCCCCCCCCCCCCCCCCCCCCCATCTCCTGAAGATCCCCCGC
CTCTCTTTCATGTATCAGCGGCGTCAAGAACATGGCCAAAATGCCCAAAG
CAAATTGGCACAATCTACGGCTCAAAGACTGTTTGTCGTGCACTGATTTC
AAGTTCAACTTCCTTTGATGAGTCACTGTATCCCACAGTGCTCATGATAG
ATGCGTCTCGCTTCGGCTCATGGCACCGATTTCCACGCTGCCCCCGCGTG
TGCACGCCTTGCAGACGTGGTTGACGTCAATATCCAAGTTCAGCTTGAAT
CATTCACGATGGCTGTATCCCCAAGTGTCCCCACAGTGCATGCGTTTTGC
TGCGGCTCACGGCATCCCTATTTTGCGCCCCCCCCCCCCCCTGTGCGCCA
CGTCTCGCAGACGTGTTTGACGGCGAGTGGGTCGACGACAAGGCACACGG
CTGGGGCATGAAGGCCTTTGCCAATGGCGACCAGCACGAAGGTGACTGCG
GGACACTCACAGTGCTTAATTATGTTATGGCATGAAGGTAACTGCGGGAC
GTTTACAGTGGTTGATGGGTGTTTGGCTCGGGTACTCCTGCAAGCGGGGC
TTGGTCGGGGGTGTCTCGCAGTTCTTGGCCAGGGTCAAGTGAGCTCCTCT
TGCAGTGTTCTGCCGGAGTCCTGGGAAGGTATGATCGGCATCAGGCGTAG
GGATTGAAGTTGGGGTTGAAGTTGGCCTGTCTCCGCGCGCCGCCTCAACA
GCATGCGCGCATGCGCAAGCGCGCAGGCGTCAACGCTAGGGTTAGGGCTG
GGGCTACGGTTCAGGGCAACCAACTCTACCCCGTCTCAGGTACTTGGGGG
CAAGCGCGCCGGCGGCAAGCCCTCTTGTGAGTCATTTATGGGACCGTGTC
AGTGTGGTGCGCTTATGGTACCGAAACGCGGAAGGTGCGCTGCCCGCACC
AATGCAACGGCGCCTACGGCAGCGGCCACCTGTCTGCGCAAAGCATGCTC
AGCATCTTTGTAGTCATGGGCATGGGACATGGCCGCATGCAAGCCCGCCG
ATGCATCGCCTTACGAATCATGTTTCGCGTGCACGACGCCTGTGCTCTCC
TCCCCCCCCCTGGGGCTAGGGGTAGGGTTAGGCCCACACAGGCTTGGGGC
CATGTTGTGACACCGTGCGCACGCACCCTGAGCGCCGCCATCGCTCGACC
CTCACGCACGCGAACACGCCACACGCGCCGAACACTGCCGCCATCCATAC
CACTCAACCATCATCACACGCGCCCCGCGCTGCCGCTGTCGCTACTGCTG
CGCGGCAAGGGCCGCATTGTGGCAGTGTCAAAATATCCGCCGGCAGCTGC
AAACACGCCGCACGTGATCACTACCACCGCCATCCATCTCACTCTGCTCA
ATCGATCCTCACGCGCGCCGCGCTGCCGCCGCGACTGCCGCTGCCGCTGC
GCGCCCCCCAGGCGCCTACGCGCACGACCTGCGCCAGGGCGAGGGCGCGT
ACCACTGGGCGAACGGCGACGCGTACAGCGGCGACTGGGACCTCGGCGAG
CAGTCCGGCTACGGGCGCTACTGCTACGCCGCGGGCTGCGCGTACGAGGG
CGTCTGGGACCAGGGCCGCAAGCACGGCAGCGGCTACTTCACGGCCGGCG
ACGGGCAGCACCTGCTCGAGCTGTGGTGCCGCGGCACGCGCATGAAGCGC
TGCAACGTCACCGCCGCCGCCGCCGCGGCCGCCGCCGCCAGCGCCGACGT
CGCGGACGGCGACGACGCCGCCGCTGCGGAGGACGCCGCTGGCGGCGCGG
CGGCAGCAGCGGCGGCGCTGGCGGAGAACGAGCTGGCGCTGGTGCCGGCG
GACAACGACGGCGGCGGCGGCGCCGCGCCACTGCTGCCGCGCCCGATGCA
CTTTGTGCGCTTCATGGAGTGGGAGTGTCGGCAGCGCGAGGCGCACGCCG
CGGGGCGCGGGCCGCCGCCGCCGAGCGCGTCGTGGCTGTGGACGCATACT
GCCGTCGCCGCCGGCGCGGACGACGACGCGGCGGCGGCGCCGCCACCGCT
CACCGCCGCTGCGGCGGCGCTGGCGCTGGCGGCGGCGGCAGCGGCGGATG
GCGATGCCGTAGACGACGTGGACGAAGAGGACATGGGAGCGGCAGCGGAA
GAGGAGGAGGCGGCGGCGGCGGCGGCGCCGCTGGTGGGCGGCGGTGGCGG
TGGCGAGGCTGATTACGGCGCCAATGCGGACGCCGGCGGCGCTGCTGGCG
TTGGCGGCGGCGGCTGGGGCGGCCCCTACATGGGTGTCGCCGGCCCACGG
GGATTTGGGGCGGAAGTGCTCGGCAGCAGCGGCGGCGGCGGCGGCGGCAG
CAGCGGCGGCGGGCTCGGCGGCGGGGAGGTCATGGGCGCGCTCGGCGTCG
GCGGCGGCGGCATGCTCGCAGCACCCGGCGGCTTGGCGGCATTTGCCGCG
GCGCCAGATGCTGCCAACTTCATGTTTGCGGCCGTAGCGCCGGCTTTCGG
CGAGCCGGGTATTGCCGGCGCCGCCGCTGCCGCTGAGATGTGGGAAGCAG
ACGTCATCGACGATGAGTAGGCACGGGGGTGCGCGAGCGCGGCAGCTGCG
CAAATGTACACGACAATGACGGTCCTGCCCCTCCGGGAAGGCGAGCGCAG
ATGTGCAGCAGAGCAGCGCCACGGGGTGCGGAGGCGCCCTGTGGCGGGTC
GCAGATCACGACCGTTGCAATTGCCGCCCTCTGTACCAAAATCCACGCGC
GCTGTACAGCTGCAGTTCCGCGCGCGTGCCTGCGGGCACGCCGCCCCCGC
ATATTGTCCCGCCAGCCCGCTTGCTGGCGCGAAATAGACGCCGCCGCCGC
TATGGCGTAGCCGC

Coding sequence (CDS) from alignment at Contig_115:230190..238103-

>mRNA_11668 ID=mRNA_11668|Name=jgi.p|Trimin1|352318|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1851bp|location=Sequence derived from alignment at Contig_115:230190..238103- (Tribonema minus UTEX_B_3156 )
ATGGTAATTCTATACCTTGAAGTAGATGTTTGCAAGGGGCACGGCGTTCA
GGCCTTTGCCAAGGGCGACAAGCGCAGCGGCTTCGGCGCGTACTTCCGGG
CCAACGGCGACAGCTACAAGGGCACGTGGAACGAAGGCATGATGCACGGT
CAGGGCACCTTCATGTGGGCGAAGGGGGACCTGTATGAAGGCGAGTGGCG
CGCCGGCAAGATGCACGGCCAGGGCACAAAGAAAATGGCAAATGGGGATG
TGTATATGGGGGAGTGGCGCTGCGGCATGGCACATGGCTGGGGGCGTAAG
AAGTTCCGCTGCGGCGACCTGCACGAGGGCCAGTACAAAGAGGACAAGAG
GTCGGGGTTCGGGATCTATGTGTGGGTGAACGGCGATCGCTACGAGGGCG
ACTGGTCCAACGGGCGCATGCACGGCAAGGGCGTCAAGATGATGGCCAAC
GGCGACGTGTACAACGGCCTCTGGGTCAGCGACAAGGCGGAGGGCATGGG
CGTCAAGATCTTTGCCTGCGGAGACCGCCACGACGGCGAGTACAAGGAGG
ACAAGCGGCACGGCTACGGCGTGTACACGTGGCAGACAGGGGACCGCTAC
GAGGGATACTGGCTCGAGGGGCGCATGAGCGGCAAGGGCGTCAAGTACAT
GGCCAACGGAGACGTGTTTGACGGCGAGTGGGTCGACGACAAGGCACACG
GCTGGGGCATGAAGGCCTTTGCCAATGGCGACCAGCACGAAGGCGCCTAC
GCGCACGACCTGCGCCAGGGCGAGGGCGCGTACCACTGGGCGAACGGCGA
CGCGTACAGCGGCGACTGGGACCTCGGCGAGCAGTCCGGCTACGGGCGCT
ACTGCTACGCCGCGGGCTGCGCGTACGAGGGCGTCTGGGACCAGGGCCGC
AAGCACGGCAGCGGCTACTTCACGGCCGGCGACGGGCAGCACCTGCTCGA
GCTGTGGTGCCGCGGCACGCGCATGAAGCGCTGCAACGTCACCGCCGCCG
CCGCCGCGGCCGCCGCCGCCAGCGCCGACGTCGCGGACGGCGACGACGCC
GCCGCTGCGGAGGACGCCGCTGGCGGCGCGGCGGCAGCAGCGGCGGCGCT
GGCGGAGAACGAGCTGGCGCTGGTGCCGGCGGACAACGACGGCGGCGGCG
GCGCCGCGCCACTGCTGCCGCGCCCGATGCACTTTGTGCGCTTCATGGAG
TGGGAGTGTCGGCAGCGCGAGGCGCACGCCGCGGGGCGCGGGCCGCCGCC
GCCGAGCGCGTCGTGGCTGTGGACGCATACTGCCGTCGCCGCCGGCGCGG
ACGACGACGCGGCGGCGGCGCCGCCACCGCTCACCGCCGCTGCGGCGGCG
CTGGCGCTGGCGGCGGCGGCAGCGGCGGATGGCGATGCCGTAGACGACGT
GGACGAAGAGGACATGGGAGCGGCAGCGGAAGAGGAGGAGGCGGCGGCGG
CGGCGGCGCCGCTGGTGGGCGGCGGTGGCGGTGGCGAGGCTGATTACGGC
GCCAATGCGGACGCCGGCGGCGCTGCTGGCGTTGGCGGCGGCGGCTGGGG
CGGCCCCTACATGGGTGTCGCCGGCCCACGGGGATTTGGGGCGGAAGTGC
TCGGCAGCAGCGGCGGCGGCGGCGGCGGCAGCAGCGGCGGCGGGCTCGGC
GGCGGGGAGGTCATGGGCGCGCTCGGCGTCGGCGGCGGCGGCATGCTCGC
AGCACCCGGCGGCTTGGCGGCATTTGCCGCGGCGCCAGATGCTGCCAACT
TCATGTTTGCGGCCGTAGCGCCGGCTTTCGGCGAGCCGGGTATTGCCGGC
GCCGCCGCTGCCGCTGAGATGTGGGAAGCAGACGTCATCGACGATGAGTA
G