mRNA_11579 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352052
Unique NamemRNA_11579
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352052 vs. uniprot
Match: A0A835ZE73_9STRA (XPA_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE73_9STRA)

HSP 1 Score: 361 bits (927), Expect = 5.200e-125
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1
Query:   10 MEKLAARKKQQSEQQQVXXXXXXXXXXXXXXXSRKRPSPSHAPLPDAKRAGGGDAETVSGGRVCESCGARDTDDPRGTLDRKLLEAFDVAVCRNCKDSKEAYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVFSSAXXXXXXXXXGASRGRRKAALGPSII 648
            MEKLAARKKQQSEQQQVXXXXXXXXXXXXXXXSRKRPSPSHAPLPDAKRAGGGDAETVSGGRVCESCGARDTDDPRGTLDRKLLEAFDVAVCRNCKDSKEAYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVFSSAXXXXXXXXXGASRGRRKAALGPSII
Sbjct:    1 MEKLAARKKQQSEQQQVXXXXXXXXXXXXXXXSRKRPSPSHAPLPDAKRAGGGDAETVSGGRVCESCGARDTDDPRGTLDRKLLEAFDVAVCRNCKDSKEAYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVFSSAXXXXXXXXXGASRGRRKAALGPSII 213          
BLAST of jgi.p|Trimin1|352052 vs. uniprot
Match: A0A6H5KUI3_9PHAE (XPA_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUI3_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 5.660e-30
Identity = 57/123 (46.34%), Postives = 88/123 (71.54%), Query Frame = 1
Query:  196 VCESCGARDTDDPRGTLDRKLLEAFDVAVCRNCKDSKEAYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVF 564
             CE CG  + DD R  +D++LLEAF ++VCR CK S+E ++ +T  DV+  +LLP+GTI VLK+VER+NP +  WT M+LYL ++   ++ +RW + + L  ER+RR++ K++ S+ RTKG+F
Sbjct:  171 ACEGCGG-EQDDAR--MDKELLEAFGISVCRTCKMSREEFQYVTTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVVAYSYRRWGSEDGLAAERRRRESLKYDRSLARTKGIF 290          
BLAST of jgi.p|Trimin1|352052 vs. uniprot
Match: D7FX65_ECTSI (XPA_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX65_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 3.630e-29
Identity = 50/107 (46.73%), Postives = 80/107 (74.77%), Query Frame = 1
Query:  244 LDRKLLEAFDVAVCRNCKDSKEAYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVF 564
            +D++LLEAF ++VCR CK S+E ++ ++  DV+  +LLP+GTI VLK+VER+NP +  WT M+LYL ++   ++ KRW + + L  ER+RR++ K++ S+ RTKG+F
Sbjct:    1 MDKELLEAFGISVCRTCKMSREEFQYVSTKDVKDTYLLPQGTIAVLKFVERDNPHHSSWTKMKLYLRREVVAYSYKRWGSEDGLAAERRRRESLKYDRSLARTKGIF 107          
BLAST of jgi.p|Trimin1|352052 vs. uniprot
Match: A0A7S3XXW5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXW5_HETAK)

HSP 1 Score: 109 bits (273), Expect = 5.860e-27
Identity = 54/125 (43.20%), Postives = 84/125 (67.20%), Query Frame = 1
Query:  199 CESCGARDTDDPRGTLDRKLLEAFDVAVCRNCKDSKEAYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVFSSA 573
            CE+C   D++     L+    + F V+VC  CK S + Y+L+TKA+V ++F LPEGTI+VL ++E+ENPR+  WTPM+L+L K  + ++  RW  +E L +ER+RRD KK + ++KRT G+   +
Sbjct:    8 CEAC-REDSE-----LNETFYQRFQVSVCNQCKISNDDYKLITKAEVVQMFCLPEGTIQVLDFIEKENPRHGTWTPMKLFLQKQVKKYSHDRWGGLEGLLQERRRRDEKKLKNALKRTSGLLKKS 126          
BLAST of jgi.p|Trimin1|352052 vs. uniprot
Match: A0A4D9D9F3_9STRA (XPA_C domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9F3_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 1.120e-19
Identity = 57/146 (39.04%), Postives = 80/146 (54.79%), Query Frame = 1
Query:  133 APLPDAKRAGGGDAETVSGGRVCESCGARDTDDPRGTLDRKLLEAFDVAVCRNCKDS-KEAYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVFS 567
            AP+P A R  G        G  CE CG+       G +D    + F + VC  CK++ +E Y L+TK D    FLL EGT+RV+ Y+ER NPRN  +  M+LY  +  R  A +RW   E L EER RR  +++E ++ +T  VF+
Sbjct:   89 APVPKAARVAGK-------GLSCEVCGS-------GLVDPMYHDVFRITVCTPCKNNNEEEYGLVTKGDAVAEFLLQEGTMRVMPYLERNNPRNTKYQKMKLYCRRLLRAKAYERWDGPEGLAEERNRRRERRYESAIDKTLNVFT 220          
BLAST of jgi.p|Trimin1|352052 vs. uniprot
Match: A0A7S4A3N4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3N4_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.670e-15
Identity = 43/123 (34.96%), Postives = 62/123 (50.41%), Query Frame = 1
Query:  199 CESCGARDTDDPRGTLDRKLLEAFDVAVCRNCKDSKEAYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVFS 567
            C++CGA          D     AF +  C  C+    + +L+   D  + +LLP+ T++ L  +ERENPR   WTPMRL+L +     A +RW     LE ER+RR A K +    + K  FS
Sbjct:   44 CDTCGA--------LADAAFRTAFSIQTCNACRRRDPSLDLLNATDAARTYLLPQATLKCLPTLERENPRQPTWTPMRLFLRRHLVEHANRRWGDEAGLEAERRRRAAAKVKRDDAKAKDFFS 158          
BLAST of jgi.p|Trimin1|352052 vs. uniprot
Match: A0A7S2MFG3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MFG3_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.710e-13
Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 1
Query:  292 CKDSKEAYEL-----MTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVF 564
            C D  E +E      +TK++  +++ LPEGT+ V  YVE+ENPR KGW  M+LY   + R  A KR+  ++ L EER +R  K++E+ ++ TK +F
Sbjct:   95 CTDDLEDFERDVGPHVTKSEAMQMYCLPEGTLAVCSYVEKENPRRKGWNKMKLYNRAEIRRRARKRYGGLDGLIEERAKRSMKRFEKDLEETKDIF 190          
BLAST of jgi.p|Trimin1|352052 vs. uniprot
Match: B6K268_SCHJY (XP-A family Rhp14 n=1 Tax=Schizosaccharomyces japonicus (strain yFS275 / FY16936) TaxID=402676 RepID=B6K268_SCHJY)

HSP 1 Score: 74.3 bits (181), Expect = 3.720e-12
Identity = 41/106 (38.68%), Postives = 66/106 (62.26%), Query Frame = 1
Query:  244 LDRKLLEAFDVAVCRNCKDS-KEAYELMTKADVQKLFLLPEGTIR---VLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKR 549
            LD K LE F   VC  C++   E Y L+TK++ ++ +LL E  +R   V+ ++ + NP  +GW+ M LYL      +A  +W ++EAL+EE +RR+AKK E++ K+
Sbjct:  128 LDAKYLEVFRCRVCHVCREKYPEKYSLLTKSECKQDYLLTEPELRDDTVMPHLLKANPHQQGWSNMMLYLRYQVEEFAKNKWGSLEALDEEFERREAKKKEQNEKK 233          
BLAST of jgi.p|Trimin1|352052 vs. uniprot
Match: A0A7S1E1A0_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E1A0_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.810e-12
Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = 1
Query:  319 LMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRDAKKWEESVKRTKGVF 564
            L+TK + ++ + LPEGT+ V  +VE+ENP  KGW  M+LY   + R+ A KR+  +E L EER  R  KK+E+ + +TK +F
Sbjct:   70 LVTKKEAKERYCLPEGTLAVCSFVEKENPHRKGWNKMKLYERFEIRLRARKRYGGLEGLIEERDERARKKFEKDLDKTKHIF 151          
BLAST of jgi.p|Trimin1|352052 vs. uniprot
Match: A0A7R9ZBY9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZBY9_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.130e-11
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 1
Query:  310 AYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARVWALKRWSTVEALEEERKRRD 519
            A + +TK++  + + LPEGT+ V +Y ER+NPR +GW PM+LY   + R  A +RW  +E L EER+RR+
Sbjct:   85 ASKYVTKSEASRQYCLPEGTLAVCRYEERDNPRGRGWAPMKLYRRVEVRRRARERWGGMEGLREERERRE 154          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352052 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A835ZE73_9STRA5.200e-125100.00XPA_C domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6H5KUI3_9PHAE5.660e-3046.34XPA_C domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FX65_ECTSI3.630e-2946.73XPA_C domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S3XXW5_HETAK5.860e-2743.20Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9D9F3_9STRA1.120e-1939.04XPA_C domain-containing protein n=2 Tax=Monodopsid... [more]
A0A7S4A3N4_9STRA7.670e-1534.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2MFG3_9STRA1.710e-1340.63Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
B6K268_SCHJY3.720e-1238.68XP-A family Rhp14 n=1 Tax=Schizosaccharomyces japo... [more]
A0A7S1E1A0_9STRA3.810e-1243.90Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A7R9ZBY9_9STRA1.130e-1145.71Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_107contigContig_107:243798..244948 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352052|estExt_Genemark1.C_Ctg_1070026
BRITEko00000,ko00001,ko03400
KEGG Pathwayko01524,ko03420,map01524,map03420
KEGG koko:K10847
GOsGO:0000003,GO:0000109,GO:0000110,GO:0000715,GO:0002119,GO:0002164,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006284,GO:0006289,GO:0006293,GO:0006294,GO:0006296,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0008340,GO:0008630,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009636,GO:0009650,GO:0009791,GO:0009987,GO:0010225,GO:0010259,GO:0012501,GO:0016043,GO:0019904,GO:0022607,GO:0023052,GO:0031334,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0033683,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034644,GO:0035264,GO:0035556,GO:0036297,GO:0040007,GO:0040025,GO:0042221,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044260,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045171,GO:0046483,GO:0046872,GO:0046914,GO:0046983,GO:0048513,GO:0048518,GO:0048522,GO:0048569,GO:0048589,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051179,GO:0051276,GO:0051641,GO:0051716,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070727,GO:0070911,GO:0070914,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071824,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0097190,GO:0097193,GO:0104004,GO:1901255,GO:1901360,GO:1901363,GO:1990391
Preferred nameXPA
Descriptionnucleotide-excision repair involved in interstrand cross-link repair
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5145@1|root,KOG4017@2759|Eukaryota
Evalue3.95e-30
Seed ortholog2880.D7FX65
Hectar predicted targeting categoryother localisation
TranscriptId352374
TrackFilteredModels1
ProteinId352052
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352052gene_11579Tribonema minus UTEX_B_3156 geneContig_107 243798..244948 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352052Trimin1|352052|estExt_Genemark1.C_Ctg_1070026Tribonema minus UTEX_B_3156 polypeptideContig_107 243833..244939 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11579_3exon_11579_3Tribonema minus UTEX_B_3156 exonContig_107 243798..244067 -
exon_11579_2exon_11579_2Tribonema minus UTEX_B_3156 exonContig_107 244310..244395 -
exon_11579_1exon_11579_1Tribonema minus UTEX_B_3156 exonContig_107 244619..244948 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_11579UTR3_11579Tribonema minus UTEX_B_3156 three_prime_UTRContig_107 243798..243832 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11579CDS_11579Tribonema minus UTEX_B_3156 CDSContig_107 244619..244939 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_11579UTR5_11579Tribonema minus UTEX_B_3156 five_prime_UTRContig_107 244940..244948 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11579 ID=mRNA_11579|Name=jgi.p|Trimin1|352052|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=686bp|location=Sequence derived from alignment at Contig_107:243798..244948- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CGCAAGGCGATGGAGAAGCTGGCAGCGAGAAAGAAGCAGCAGTCAGAGCA
ACAGCAAGTGCAGCAACAGGCGCAGCACAGAGAGCAAGAGCAGCCAGAGC
AGCCAAGCAGAAAACGGCCCAGCCCGAGTCATGCGCCCCTGCCCGATGCT
AAGAGAGCTGGAGGAGGGGATGCCGAAACAGTGTCGGGCGGCAGGGTGTG
CGAGTCGTGTGGGGCGAGGGACACTGATGATCCGCGGGGGACACTAGATC
GCAAGTTGCTAGAAGCATTCGACGTTGCTGTGTGCCGCAATTGCAAGGAC
AGCAAGGAGGCTTACGAACTGATGACAAAGGCTGATGTACAAAAGCTGTT
TCTATTACCGGAGGGCACCATCAGGGTGCTCAAGTACGTGGAGCGGGAAA
ATCCTCGAAACAAGGGCTGGACGCCCATGCGGCTGTACCTGCACAAGGAC
GCGCGCGTGTGGGCGCTGAAGCGGTGGAGCACTGTGGAGGCGCTGGAGGA
GGAGCGCAAGCGGCGCGACGCCAAGAAGTGGGAGGAGTCCGTGAAGCGCA
CCAAGGGCGTGTTCAGCAGCGCCGGCGGCGCCGCCGCGGGCGGCGGCAGC
GGCGCGAGCAGGGGGCGGAGAAAGGCGGCGCTAGGTCCATCCATTATATG
ACGTTATATGACATGCAGCAAAGGTGCTTGGAATGC
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protein sequence of jgi.p|Trimin1|352052

>Trimin1|352052|estExt_Genemark1.C_Ctg_1070026 ID=Trimin1|352052|estExt_Genemark1.C_Ctg_1070026|Name=jgi.p|Trimin1|352052|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=214bp
MEKLAARKKQQSEQQQVQQQAQHREQEQPEQPSRKRPSPSHAPLPDAKRA
GGGDAETVSGGRVCESCGARDTDDPRGTLDRKLLEAFDVAVCRNCKDSKE
AYELMTKADVQKLFLLPEGTIRVLKYVERENPRNKGWTPMRLYLHKDARV
WALKRWSTVEALEEERKRRDAKKWEESVKRTKGVFSSAGGAAAGGGSGAS
RGRRKAALGPSII*
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mRNA from alignment at Contig_107:243798..244948-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11579 ID=mRNA_11579|Name=jgi.p|Trimin1|352052|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1151bp|location=Sequence derived from alignment at Contig_107:243798..244948- (Tribonema minus UTEX_B_3156 )
CGCAAGGCGATGGAGAAGCTGGCAGCGAGAAAGAAGCAGCAGTCAGAGCA ACAGCAAGTGCAGCAACAGGCGCAGCACAGAGAGCAAGAGCAGCCAGAGC AGCCAAGCAGAAAACGGCCCAGCCCGAGTCATGCGCCCCTGCCCGATGCT AAGAGAGCTGGAGGAGGGGATGCCGAAACAGTGTCGGGCGGCAGGGTGTG CGAGTCGTGTGGGGCGAGGGACACTGATGATCCGCGGGGGACACTAGATC GCAAGTTGCTAGAAGCATTCGACGTTGCTGTGTGCCGCAATTGCAAGGAC AGCAAGGAGGCTTACGAACTGATGACAAAGGCAAGTCAGCATTAATCCGG CATATCTGCGTGCTGAAGCATCAATGACATGCTTTCGGACCTCTCACAAA GCAGCGTTGCACGTGATTACATCATCTTGGTTTTCATTTGTTGCATCAGT ACTCACTGCACATGCGCCGGCATCGTTGCGCCTACACCGTCGGTAATCCT AAATTATCTTGTCCTCTTCCACTCCTTCCTCTGTGCGTTGCTCTTGCCTG CAGGCTGATGTACAAAAGCTGTTTCTATTACCGGAGGGCACCATCAGGGT GCTCAAGTACGTGGAGCGGGAAAATCCTCGAAACAAGGGGTAAGCACAGC CGGTGAATCGCCAGGAGTCTTGCGGCGCAGCTCCTCTCAGCATTTGCGGT CATTGCACACACCCTCCTCACCGCACGCAGTTGCCCTCATATGGCATGCC TCAACTCATGAAGTCCTATAAAGCAGGCATCGGCCGGGCTGTGCGTGGCA CTGCAACGCCTCATCGTGCCGCGCTCACCGCACAGCGCCCCCCCCCCCCC TGGTTTCTGCGCGCGCGCACGCGAACGGCAGCTGGACGCCCATGCGGCTG TACCTGCACAAGGACGCGCGCGTGTGGGCGCTGAAGCGGTGGAGCACTGT GGAGGCGCTGGAGGAGGAGCGCAAGCGGCGCGACGCCAAGAAGTGGGAGG AGTCCGTGAAGCGCACCAAGGGCGTGTTCAGCAGCGCCGGCGGCGCCGCC GCGGGCGGCGGCAGCGGCGCGAGCAGGGGGCGGAGAAAGGCGGCGCTAGG TCCATCCATTATATGACGTTATATGACATGCAGCAAAGGTGCTTGGAATG C
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Coding sequence (CDS) from alignment at Contig_107:243798..244948-

>mRNA_11579 ID=mRNA_11579|Name=jgi.p|Trimin1|352052|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=642bp|location=Sequence derived from alignment at Contig_107:243798..244948- (Tribonema minus UTEX_B_3156 )
ATGGAGAAGCTGGCAGCGAGAAAGAAGCAGCAGTCAGAGCAACAGCAAGT
GCAGCAACAGGCGCAGCACAGAGAGCAAGAGCAGCCAGAGCAGCCAAGCA
GAAAACGGCCCAGCCCGAGTCATGCGCCCCTGCCCGATGCTAAGAGAGCT
GGAGGAGGGGATGCCGAAACAGTGTCGGGCGGCAGGGTGTGCGAGTCGTG
TGGGGCGAGGGACACTGATGATCCGCGGGGGACACTAGATCGCAAGTTGC
TAGAAGCATTCGACGTTGCTGTGTGCCGCAATTGCAAGGACAGCAAGGAG
GCTTACGAACTGATGACAAAGGCTGATGTACAAAAGCTGTTTCTATTACC
GGAGGGCACCATCAGGGTGCTCAAGTACGTGGAGCGGGAAAATCCTCGAA
ACAAGGGCTGGACGCCCATGCGGCTGTACCTGCACAAGGACGCGCGCGTG
TGGGCGCTGAAGCGGTGGAGCACTGTGGAGGCGCTGGAGGAGGAGCGCAA
GCGGCGCGACGCCAAGAAGTGGGAGGAGTCCGTGAAGCGCACCAAGGGCG
TGTTCAGCAGCGCCGGCGGCGCCGCCGCGGGCGGCGGCAGCGGCGCGAGC
AGGGGGCGGAGAAAGGCGGCGCTAGGTCCATCCATTATATGA
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