mRNA_11568 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352045
Unique Name	mRNA_11568
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352045 vs. uniprot
Match: A0A836CMJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMJ9_9STRA)

HSP 1 Score: 476 bits (1225), Expect = 8.060e-167
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 1

Query:   19 MPSSSRPRTSSWLLLLLSLSPAASSAWAFVPSAPAFGRALGPSSLRLATSESPAADAAATSGSDAVSYETLQELRLFRAADGTQVALGSLWGEHDTAVVAFLRLKKDWAPRLDWSKLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAIGQSAW 738
            MPSSSRPRTSSWLLLLLSLSPAASSAWAFVPSAPAFGRALGPSSLRLATSESPAADAAATSGSDAVSYETLQELRLFRAADGTQVALGSLWGEHDTAVVAFLRLKKDWAPRLDWSKLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAIGQSAW
Sbjct:    1 MPSSSRPRTSSWLLLLLSLSPAASSAWAFVPSAPAFGRALGPSSLRLATSESPAADAAATSGSDAVSYETLQELRLFRAADGTQVALGSLWGEHDTAVVAFLRLKKDWAPRLDWSKLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAIGQSAW 240

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BLAST of jgi.p|Trimin1|352045 vs. uniprot
Match: A0A6A2XLG6_HIBSY (Detected protein of confused Function n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XLG6_HIBSY)

HSP 1 Score: 105 bits (262), Expect = 2.250e-22
Identity = 75/213 (35.21%), Postives = 107/213 (50.23%), Query Frame = 1

Query:  127 GRALGPSSLRLATSESPAADAAATSGSDAVSYETLQELRLFRAADGTQVALGSLWGEHD-TAVVAFLR------------LKKDWAPRLDWS--KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRY-IKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLE 717
            G A G S   +  S SPA + +   G      + L E+ +F A+ G  V    LW +++  AVVAFLR            + K+  P+ D +  KLIVVG+GTPDKA    + + FP+  LY DP+  AY   G+ YG G  +  F   ++        + +AM  Y IK  PD    V QQGG+  FKG +L +  +D+G G HA L D+ +
Sbjct:   47 GNAGGNSRFMVKVSSSPAPEFSTNIG------DILGEVTVFTAS-GQPVLFRDLWDQNEGVAVVAFLRHFGCFCCWELASVLKEAMPKFDSAGVKLIVVGVGTPDKARILAERVPFPMDSLYADPERKAYDVLGLYYGLGRTF--FNPASAKVFSRVDQVKKAMENYTIKATPDDVSSVLQQGGMFVFKGNQLLYARKDEGTGDHAPLDDIFD 250

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BLAST of jgi.p|Trimin1|352045 vs. uniprot
Match: A0A6I9T0M8_SESIN (thioredoxin-like protein AAED1, chloroplastic isoform X1 n=2 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9T0M8_SESIN)

HSP 1 Score: 96.7 bits (239), Expect = 3.320e-19
Identity = 65/183 (35.52%), Postives = 93/183 (50.82%), Query Frame = 1

Query:  223 ETLQELRLFRAADGTQVALGSLWGEHD-TAVVAFLR------------LKKDWAPRLDWS--KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMD---EAMRRY-IKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVL 714
            + L E+ +F AA G  V    LW + +  AVVA LR              ++   + D +  KLIVVG+GTPDKA    + L FP+  L+ DPD  AY   G+ YG    +L+        T+    +D   +AM+ Y IK  PD    V QQGG+  FKG++L +  +++G G HA L D+ 
Sbjct:   73 DVLGEVSIFTAA-GEPVKFKDLWDQKEGMAVVALLRHFGCFFCWEFAEALRESKEKFDLAGVKLIVVGVGTPDKAQILAERLPFPLDSLFADPDHKAYDILGLYYGLRRTFLN-----PASTKVFSRVDALKKAMKNYTIKATPDDRSSVLQQGGMFVFKGKQLLYARKEEGSGDHAPLDDIF 249

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BLAST of jgi.p|Trimin1|352045 vs. uniprot
Match: A4RRX9_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4RRX9_OSTLU)

HSP 1 Score: 87.4 bits (215), Expect = 2.060e-16
Identity = 57/176 (32.39%), Postives = 88/176 (50.00%), Query Frame = 1

Query:  223 ETLQELRLFRAADGTQVALGSLWGEHDTAVVAFLRLKKDWAPRLDWS--KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDE----AMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAIGQS 732
            E L+ + + RA DG +V +  + G   T V A + L +D  P LD +  +L+VV IGT ++A  F +  DFPI+LLY D +++ Y A  +  G  + ++   T  S   R      +     ++R+    P +P+   QQGG   F+     +V  D   G HA L D+ EA G S
Sbjct:   23 EALRAVEVMRAIDGARVTVPEVVGARGTVVRA-VELARDAIPTLDAAGVRLVVVSIGTLERAKDFSRENDFPIELLYADAESATYEALKLRKGAKQTFMEKSTPESILKRWNKDGAKDLLGVLKRWKPWLPPRPDQGYQQGGSFVFRDGVATYVSYDVSTGAHAPLDDIFEAAGVS 197

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BLAST of jgi.p|Trimin1|352045 vs. uniprot
Match: A0A835TML9_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TML9_CHLIN)

HSP 1 Score: 73.6 bits (179), Expect = 1.680e-11
Identity = 41/126 (32.54%), Postives = 62/126 (49.21%), Query Frame = 1

Query:  364 KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSF---QTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAIGQS 732
            KL+VV IGTP+   +F  A+ FP++LL  DPD   Y          +G+++    +T  +   R          +Y  I P   +  +  GGV      ++ + HRD+GPG+HA + DVL A G S
Sbjct:   76 KLVVVSIGTPEGGRQFCSAVPFPLELLLLDPDHKLYDHLNC----HQGFMAMFGAKTWGAIRARGWNEFKSLFNKYEMIKPKSIKSTSIMGGVFVLHNGKVLYEHRDEGPGVHAPIKDVLAACGAS 197

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BLAST of jgi.p|Trimin1|352045 vs. uniprot
Match: A0A1Y5I2X2_OSTTA (AhpC/TSA antioxidant enzyme-domain-containing protein n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5I2X2_OSTTA)

HSP 1 Score: 67.8 bits (164), Expect = 3.580e-10
Identity = 38/124 (30.65%), Postives = 62/124 (50.00%), Query Frame = 1

Query:  361 SKLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDE----AMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEA 720
            ++L+VV IGT ++A  F +   FPI+ LY D  +  Y A  +  G    ++   T  S   R + +  +     ++R+    P +P+   QQGG   F+G +  +V  D+  G HA L D+L A
Sbjct:    3 ARLVVVSIGTLERAKDFARENAFPIEYLYADEQSETYDALKLNKGVDATFMRKSTPESILARWKDNGAKDLLGVLKRWKPWLPPRPDQGYQQGGSFVFRGSKTVYVSYDESTGAHAPLEDILRA 126

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BLAST of jgi.p|Trimin1|352045 vs. uniprot
Match: A0A835TPB7_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TPB7_CHLIN)

HSP 1 Score: 66.2 bits (160), Expect = 1.010e-8
Identity = 39/117 (33.33%), Postives = 55/117 (47.01%), Query Frame = 1

Query:  364 KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVL 714
            KL+VV IGTP+   +F   L FP +LL  DPD   Y       G  +   S +T  +   R        + +Y  I P   +     GGV      ++ F +RD+GPG+HA + DVL
Sbjct:  121 KLVVVSIGTPEGGRQFCSTLPFPPELLLLDPDYKLYGHLKCYEGF-KAMFSPKTWDAMKAREWNEFKALLDKYKMIAPKSMDSTAVMGGVFVLDNGKVLFEYRDEGPGVHAPMKDVL 236

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BLAST of jgi.p|Trimin1|352045 vs. uniprot
Match: K8F561_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8F561_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 5.450e-8
Identity = 40/135 (29.63%), Postives = 59/135 (43.70%), Query Frame = 1

Query:  364 KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRP----HMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGR----------ELAFVHRDQGPGMHADLPDVLEAIG 726
            KLIV+ IGT ++A  F +  +FP+++LY DP    Y    + +G  E      T  S   R R      + + ++R+    P K E   QQGG   F  +          E  +   D   G HA   ++LEA G
Sbjct:   10 KLIVISIGTEERARDFCRENEFPMEILYADPINVTYDKLRLNFGVKETLFDASTPYSIAERIREGKIKELTDVLKRWKPWIPPKREQGLQQGGTFVFDTKRIKGDSEVEYECVYDWYDPSTGAHAPAEEILEACG 144

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BLAST of jgi.p|Trimin1|352045 vs. uniprot
Match: A0A835T684_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T684_9CHLO)

HSP 1 Score: 63.5 bits (153), Expect = 8.560e-8
Identity = 36/117 (30.77%), Postives = 54/117 (46.15%), Query Frame = 1

Query:  364 KLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVL 714
            KL+V+ IGTP+   +F   L FP +LL  DPD   Y       G  +   S +T  +   R        + +Y  I P   +     GG+      ++ + HRD GPG+HA + +VL
Sbjct:  124 KLVVISIGTPEGGRQFCSTLPFPPELLLLDPDYKLYGHLKCYEGF-KAMFSPKTWDAMKAREWNEFKALLDKYKMIAPKSVDSTAVMGGLFVLDNGKVLYEHRDDGPGVHAPMKEVL 239

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BLAST of jgi.p|Trimin1|352045 vs. uniprot
Match: E1ZCF6_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZCF6_CHLVA)

HSP 1 Score: 55.1 bits (131), Expect = 8.210e-5
Identity = 55/232 (23.71%), Postives = 85/232 (36.64%), Query Frame = 1

Query:  211 AVSYETLQELRLFRAADGTQVALGSLWGEHDTAVVAFLRLKKDWAPRLDWSKL--IVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSAYTATG-------------------MIYGTGE---------GYLS-------------------------------FQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVNQQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAI 723
            A S E +    L++A  GT+  +  L    D +     +      P L  S +  + VG+G P+KA KF + L FP+ LLY DP  + Y+A                     M+ G G          GY+                                +Q      T    +M+  +  + ++ P     + QQGG LAF GR+  F H D G   +AD+  +  A+
Sbjct:   35 AASGEEVALTSLWQAQPGTRCVVACLTHFGDLSSTECAQKLLAVLPELRASGVGVLAVGLGEPEKARKFAELLGFPLDLLYADPTGALYSALAFSPGFAPETRISAYAKLLVMLAGVGSPGTIQEVLRGYVGDRSAKPVFTSGXXXXXXXXXXXNLFDVLGRGYQRPFELATLRLYNMNLVLSHWNELAPADERLLTQQGGCLAFDGRQTIFRHTDTGILKYADIDALAAAV 266

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352045 vs. uniprot

BLAST of jgi.p|Trimin1|352045 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
A0A836CMJ9_9STRA	8.060e-167	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6A2XLG6_HIBSY	2.250e-22	35.21	Detected protein of confused Function n=1 Tax=Hibi...	[more]
A0A6I9T0M8_SESIN	3.320e-19	35.52	thioredoxin-like protein AAED1, chloroplastic isof...	[more]
A4RRX9_OSTLU	2.060e-16	32.39	Uncharacterized protein n=1 Tax=Ostreococcus lucim...	[more]
A0A835TML9_CHLIN	1.680e-11	32.54	Uncharacterized protein n=1 Tax=Chlamydomonas ince...	[more]
A0A1Y5I2X2_OSTTA	3.580e-10	30.65	AhpC/TSA antioxidant enzyme-domain-containing prot...	[more]
A0A835TPB7_CHLIN	1.010e-8	33.33	Uncharacterized protein n=1 Tax=Chlamydomonas ince...	[more]
K8F561_9CHLO	5.450e-8	29.63	Uncharacterized protein n=1 Tax=Bathycoccus prasin...	[more]
A0A835T684_9CHLO	8.560e-8	30.77	Uncharacterized protein n=1 Tax=Chlamydomonas schl...	[more]
E1ZCF6_CHLVA	8.210e-5	23.71	Uncharacterized protein n=1 Tax=Chlorella variabil...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_107	contig	Contig_107:128880..133100 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352045\|estExt_Genemark1.C_Ctg_1070015
Description	AhpC/TSA antioxidant enzyme
COG category	S
Max annot lvl	35493\|Streptophyta
EggNOG OGs	KOG4498@1\|root,KOG4498@2759\|Eukaryota,37Q8T@33090\|Viridiplantae,3G7G1@35493\|Streptophyta,3KR8G@4447\|Liliopsida
Evalue	3.61e-24
Seed ortholog	4641.GSMUA_Achr1P14250_001
Hectar predicted targeting category	chloroplast
TranscriptId	352367
Track	FilteredModels1
ProteinId	352045

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352045	gene_11568	Tribonema minus UTEX_B_3156	gene	Contig_107 128880..133100 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352045	Trimin1\|352045\|estExt_Genemark1.C_Ctg_1070015	Tribonema minus UTEX_B_3156	polypeptide	Contig_107 128898..132592 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11568_1	exon_11568_1	Tribonema minus UTEX_B_3156	exon	Contig_107 128880..129149 +
exon_11568_2	exon_11568_2	Tribonema minus UTEX_B_3156	exon	Contig_107 129399..129455 +
exon_11568_3	exon_11568_3	Tribonema minus UTEX_B_3156	exon	Contig_107 130974..131031 +
exon_11568_4	exon_11568_4	Tribonema minus UTEX_B_3156	exon	Contig_107 131426..131546 +
exon_11568_5	exon_11568_5	Tribonema minus UTEX_B_3156	exon	Contig_107 131871..131988 +
exon_11568_6	exon_11568_6	Tribonema minus UTEX_B_3156	exon	Contig_107 132476..133100 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_11568	UTR5_11568	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_107 128880..128897 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11568	CDS_11568	Tribonema minus UTEX_B_3156	CDS	Contig_107 128898..129149 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_11568	UTR3_11568	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_107 132593..133100 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_107:128880..133100+
coding sequence from alignment at Contig_107:128880..133100+

spliced messenger RNA

>mRNA_11568 ID=mRNA_11568|Name=jgi.p|Trimin1|352045|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1249bp|location=Sequence derived from alignment at Contig_107:128880..133100+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ACGGGGAGCAAGCTAAGGATGCCGTCGTCATCTCGACCTAGGACCTCCTC
GTGGCTCTTGCTGCTGCTGTCGCTGTCGCCGGCGGCGTCGTCAGCCTGGG
CATTTGTACCCAGCGCGCCAGCTTTTGGCCGTGCTCTCGGCCCGTCTTCG
CTGCGCCTGGCTACTTCGGAAAGCCCAGCTGCCGATGCCGCTGCGACAAG
CGGCAGCGATGCCGTGTCATATGAGACACTGCAGGAGCTGCGCCTATTCA
GAGCCGCGGACGGAACTCAGGTGGCTCTAGGGTCTCTATGGGGAGAGCAC
GACACGGCCGTGGTGGCCTTCCTCAGGCTCAAGAAAGACTGGGCTCCACG
GCTCGACTGGTCGAAGCTGATCGTTGTGGGAATCGGCACGCCAGACAAGG
CAGCAAAGTTTGGCAAGGCCCTGGACTTCCCAATCAAGCTGCTTTACTGC
GACCCTGACACCAGCGCATACACCGCAACAGGCATGATCTACGGTACTGG
CGAAGGGTACCTGTCTTTTCAGACGCTCACCAGCTGCGGCACGCGCACTC
GGCCGCACATGGATGAAGCCATGCGCAGATACATCAAAATTGACCCAGAC
AAGCCGGAATACGTCAATCAGCAGGGCGGTGTCTTGGCCTTCAAGGGGCG
CGAACTGGCGTTTGTGCACCGTGACCAGGGGCCGGGTATGCATGCAGACC
TGCCTGACGTACTGGAGGCCATCGGGCAGAGCGCGTGGTAGACAGTGTGG
CGCTACCGAAGTGCATCGGGGTGTATCAAATGTCTGCTGACACCAAAGCA
GGTCGGCATCTGCAGCCCATCAGTGACTGGACAACTGCGGTCATACTCCC
TGTATATCAGCCATAAGCCGCTGTCACTGCAAAGCTGCTGCACCACACGC
AGAGGGTTTCACGCAATGAGGATTGCGTACTACGAAGTACTTCTATATAC
TTTGCAGATGGACGTCTGAAATCCAGCATGCAGGTAGCACATGCGTGCAT
GTAGCCGACTGCTCCGCTGCTGGCCCTTATTTTTGCTTCAGCGGGTGAGC
TGTGCAGAGGAACGATTCATTTGTACATCCTTAGCCTAGTCAACGCCCCT
CAAGAAAGCAGGGTTTGATATGGCGAACGATGAAGCCTTCATGCAGCGAA
AAGCATGCATGTGCCAGCATGCGGGACGAGCTGACCTGGATGTGGTCACC
ATGTGCATCACTAGTTTGTAGCTTGTCAAATAAAACACACTTGGAGCTA

protein sequence of jgi.p|Trimin1|352045

>Trimin1|352045|estExt_Genemark1.C_Ctg_1070015 ID=Trimin1|352045|estExt_Genemark1.C_Ctg_1070015|Name=jgi.p|Trimin1|352045|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=241bp
MPSSSRPRTSSWLLLLLSLSPAASSAWAFVPSAPAFGRALGPSSLRLATS
ESPAADAAATSGSDAVSYETLQELRLFRAADGTQVALGSLWGEHDTAVVA
FLRLKKDWAPRLDWSKLIVVGIGTPDKAAKFGKALDFPIKLLYCDPDTSA
YTATGMIYGTGEGYLSFQTLTSCGTRTRPHMDEAMRRYIKIDPDKPEYVN
QQGGVLAFKGRELAFVHRDQGPGMHADLPDVLEAIGQSAW*

mRNA from alignment at Contig_107:128880..133100+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11568 ID=mRNA_11568|Name=jgi.p|Trimin1|352045|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4221bp|location=Sequence derived from alignment at Contig_107:128880..133100+ (Tribonema minus UTEX_B_3156 )
ACGGGGAGCAAGCTAAGGATGCCGTCGTCATCTCGACCTAGGACCTCCTC
GTGGCTCTTGCTGCTGCTGTCGCTGTCGCCGGCGGCGTCGTCAGCCTGGG
CATTTGTACCCAGCGCGCCAGCTTTTGGCCGTGCTCTCGGCCCGTCTTCG
CTGCGCCTGGCTACTTCGGAAAGCCCAGCTGCCGATGCCGCTGCGACAAG
CGGCAGCGATGCCGTGTCATATGAGACACTGCAGGAGCTGCGCCTATTCA
GAGCCGCGGACGGAACTCAGGTATGTGTAGCAAAAGTGTCTGCGCGCTGG
CGTGGTATGAGAGTGAAGCCTGTTGACGGCTTTCGGGTCTTTCTGCTGCA
TAGCTACCCTCAGCCATTTGCGTGGTGCACGTTTTCTGCCGACAGTAGCG
TCTCCAGTATGTTAGCTTCTATGCTTACTTCTCACGTGGTCTGGAGCCTC
GGACACCTGTCATGTTCGCTGCCTGATGCCCAAGTGCCGTTGTCGATGCC
TCCTTCCCTTTGCCGCAAGGTGGCTCTAGGGTCTCTATGGGGAGAGCACG
ACACGGCCGTGGTGGCCTTCCTCAGGGTGAGTTCGTGGCAACATCATTGA
GTAGGACAACCAAACAACAACAAGAAAGCTCTCGTCCTCGGCTCTGCCAA
AGACTGGCCTAAGCTCATAAATTTAGGGCAGGAAAAGGTAAGCTGCCTAC
ATACGCCCTGCTAATCTTGTGGTAGATTTGCCTCACAATCGCATGCTCTC
GGCCTGTGCACTCAATGATGGCGTCAAAACCTCAGCACAGTTTATGCAGG
AACCTCATGACCGAATCTCCTCGAATGCGGCTGCCTCGTTAACTACGAGC
AGACTGCCATCTGTAGGTGATTTAACTTCTGGTAATATTATTACAGTACA
TGCCGGCCCCTGATTAAAGTGATCATGAGGGCTGGGGCCGTGCCAATGCC
TGCGTGGACATACTGAACTGAGGCGCGCATTGAAAACACACGCACACACA
CGCTTGCACACCTGCCCTGTGTTACGCAGCAGTAAGGGACGACGTCGCGA
CAACAGGGGATTCAGTCAGAGCCGAAGCCACGAGACTCAAGCACGGACGT
GCACAGAGTATTTAGGTCACTGCTTGCTCCACATCATTTGTGTGCCAGAA
GCTTTGGGTGTCTGAGCAAAGGTAGACCGGTTGCATTGCATACACAAGTA
GCATCAGACTGCATTGCATGCCGCAGCGCCCGCTCCACCACATTTGACAT
GCCTCCTGCATGCAGGGAAGCTGTCCATTTGCTTCACGATAAAGACTTGA
CACAGTCACACGAACTGAAGATCATTGGGGCGCCAGTGGGCATATTGTTT
GTGCTGCACGGGACGTGCGTGCTCCGCTGCACCAGCAATCATCGCACCAT
GCCTCTGCTGCTCTCACCTTCTGTTGCGATGGTTTTGTCTGCGTGTTGTG
CAATGCCACCACCGCACCAATATCCTTGGCCCACGCTGCATCGGCCTCTA
CTCACGCACGTGTGCTGGGTGGTGCACTGCACAATGTTGCACACCCCAGC
ATTTTGGCTGCCCCATGTGAGTGCAACTGCAGTTAATCTGCCTTCGTAGT
ATCAAGTGCTGAAGCGATCGATCTACTTCAAAAGGCAGCCATGAAATGTG
AACCATCAGTGTGCACAGCCAATTGTGGCCTTGGAATTTGCGTCGTGTAG
CTGTTATAAGTGGACTTCACGATACACGGGCGAGCTGCTGCCACCTGCCA
CACACGCACATGGGCACAACAACCACAAGCAATATTTCCTGGTATGGTGC
TGCAGCATGGTACTCAATTGTAAATACGGTGGGGTAGACCTCATTTTTCT
TCACGTTTCTGTACACTACAGCATGACGGCATACTGCTGGGCGCTGCGTA
CACACTGGAGCCAGCGGCCGCAGCACGCGTTGCGTCAAAAGACAATCACG
TTTTCTGCAGCTGCCGTGAATATCAAACGACCCTGACACATGGCTGACGC
AAACAAACTGCCTGTGAAGTCCAATGCGAAGGCATCACGTGGTGCTCCTG
CGGCTTGCGCCTGCTTGTGCAGCTGCTGGGACCTGGCACTGCAGCTCAAG
AAAGACTGGGCTCCACGGCTCGACTGGTCGAAGCTGATCGTTGTGGGAAT
CGGTAGGTCAAAGTTGCATGCAAAATTACACAGCAGCCTGTCCACAGGAG
TCGTCGACACACCTACAGAGCCTTGACCATTTTCAACAAAGAACTGGACT
GTGAAGACATCTTGCACATTGTCAATTTCATGCCTGACTGCATGCAATTT
GACGATTCAACATAAGACCTGCCTCATGGTGTCATGATTGATATTGCATG
CTGCAGCACGGCAGGTCTGTCAACGATTCATAACTACAAATGCTGTCACA
GCAGGGAAATGCGGCCACATCATGTCAGTTACCGTTATGTGGCTGTGCTT
GCACCATCCATAGTCAGAGCCATTTGATGGCCTTGCAGCAAGGTTACGCC
ATCGTGACATGTGTTGCATGATGTATGCGTTACCCTCTGCTTGCAGGCAC
GCCAGACAAGGCAGCAAAGTTTGGCAAGGCCCTGGACTTCCCAATCAAGC
TGCTTTACTGCGACCCTGACACCAGCGCATACACCGCAACAGGCATGATC
TACGGTACTGGCGAAGGGTGAGGCGCCTACAGTCAGCGACATTGGTTGTG
CGTTTGTTGACATGTGTTGCTGATATGGCAAATCCACCTGTGGCAACGCC
AATAATACTGCCACTGTTAAATGAGTAAGGGCAGGGAGCACACTACACCG
AAAAGATGCCTTGATCCCGTCCACAACCATTGTACGGTATATCCCATGGC
ATTGCACTCTGCAAGGGTTATCGGTCAAGTCGTTACACTGTACATATGTC
ACGAATTCAGCATGACATTGGCTGGCTGTTCTTTGCATCCATAGCGCCAA
ATGAGCAATGCCTTTGTCTTTGTGTCTGTGCGCGCATGCAGGTACCTGTC
TTTTCAGACGCTCACCAGCTGCGGCACGCGCACTCGGCCGCACATGGATG
AAGCCATGCGCAGATACATCAAAATTGACCCAGACAAGCCGGAATACGTC
AATCAGCAGGTACGCACCAGCACTATTGCCACCTGAAATTCAAGACGTTT
TGTGACTACACCTTCAGCGTCGCATGTGTAGCCTTCAAGCGTACTCATAA
CAAGCATTCACCAATTTGAGCATGATGCTCTGAGAGATGCAGCAGCTGAC
GGCTGCGTACGTCTCCCAGGGTGTTGTCTGCCGTGTCCTCAATGGTAGAT
GCGACTTTCAAGCATGCCAGCACTCGTTTGCCCGTCCTGAGTTCACTGAT
GTACCTTTGTGCAAGTGCAACATGACCAAAGAGCACTCATATGAGCTACA
CATAGCCTACTACCTTGACACGCTGTTGGTAAGTGAGAGACACACAAGAC
CTTCAATCTTGGCAGAGGCAGCGGTAATGCCGCCATCAGATATTGCCCGT
GTGTGAGCGTGAAAGCGCGGCCGATATGTGTCAGCGCCTCTCGTGTCAGT
GCAGTCACATGCACCCATGACGCCGCGCAACACCGTGTCGCTGCAGGGCG
GTGTCTTGGCCTTCAAGGGGCGCGAACTGGCGTTTGTGCACCGTGACCAG
GGGCCGGGTATGCATGCAGACCTGCCTGACGTACTGGAGGCCATCGGGCA
GAGCGCGTGGTAGACAGTGTGGCGCTACCGAAGTGCATCGGGGTGTATCA
AATGTCTGCTGACACCAAAGCAGGTCGGCATCTGCAGCCCATCAGTGACT
GGACAACTGCGGTCATACTCCCTGTATATCAGCCATAAGCCGCTGTCACT
GCAAAGCTGCTGCACCACACGCAGAGGGTTTCACGCAATGAGGATTGCGT
ACTACGAAGTACTTCTATATACTTTGCAGATGGACGTCTGAAATCCAGCA
TGCAGGTAGCACATGCGTGCATGTAGCCGACTGCTCCGCTGCTGGCCCTT
ATTTTTGCTTCAGCGGGTGAGCTGTGCAGAGGAACGATTCATTTGTACAT
CCTTAGCCTAGTCAACGCCCCTCAAGAAAGCAGGGTTTGATATGGCGAAC
GATGAAGCCTTCATGCAGCGAAAAGCATGCATGTGCCAGCATGCGGGACG
AGCTGACCTGGATGTGGTCACCATGTGCATCACTAGTTTGTAGCTTGTCA
AATAAAACACACTTGGAGCTA

Coding sequence (CDS) from alignment at Contig_107:128880..133100+

>mRNA_11568 ID=mRNA_11568|Name=jgi.p|Trimin1|352045|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=723bp|location=Sequence derived from alignment at Contig_107:128880..133100+ (Tribonema minus UTEX_B_3156 )
ATGCCGTCGTCATCTCGACCTAGGACCTCCTCGTGGCTCTTGCTGCTGCT
GTCGCTGTCGCCGGCGGCGTCGTCAGCCTGGGCATTTGTACCCAGCGCGC
CAGCTTTTGGCCGTGCTCTCGGCCCGTCTTCGCTGCGCCTGGCTACTTCG
GAAAGCCCAGCTGCCGATGCCGCTGCGACAAGCGGCAGCGATGCCGTGTC
ATATGAGACACTGCAGGAGCTGCGCCTATTCAGAGCCGCGGACGGAACTC
AGGTGGCTCTAGGGTCTCTATGGGGAGAGCACGACACGGCCGTGGTGGCC
TTCCTCAGGCTCAAGAAAGACTGGGCTCCACGGCTCGACTGGTCGAAGCT
GATCGTTGTGGGAATCGGCACGCCAGACAAGGCAGCAAAGTTTGGCAAGG
CCCTGGACTTCCCAATCAAGCTGCTTTACTGCGACCCTGACACCAGCGCA
TACACCGCAACAGGCATGATCTACGGTACTGGCGAAGGGTACCTGTCTTT
TCAGACGCTCACCAGCTGCGGCACGCGCACTCGGCCGCACATGGATGAAG
CCATGCGCAGATACATCAAAATTGACCCAGACAAGCCGGAATACGTCAAT
CAGCAGGGCGGTGTCTTGGCCTTCAAGGGGCGCGAACTGGCGTTTGTGCA
CCGTGACCAGGGGCCGGGTATGCATGCAGACCTGCCTGACGTACTGGAGG
CCATCGGGCAGAGCGCGTGGTAG