mRNA_11414 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A835YJ38_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ38_9STRA) HSP 1 Score: 722 bits (1864), Expect = 5.350e-262 Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 1 Query: 1 MDLTTLGAPPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMYGG 1182 MDLTTLGAPPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMYGG Sbjct: 1 MDLTTLGAPPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMYGG 394
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A835YXT7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT7_9STRA) HSP 1 Score: 409 bits (1051), Expect = 5.870e-140 Identity = 234/300 (78.00%), Postives = 244/300 (81.33%), Query Frame = 1 Query: 223 CTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAAT 1122 CTAIQINRTLIQSRDGTIA+WDS+RLASGDTGAGRCG ISTGAHHFCQI LPRWPSADSSXXXXXXXXXX AALP QCVLAPCEEQSR+QLWDLRAQAPQL+IDAP DAADG+KSAGMVMCCRLLGGGARPLAAAGYEDGSLACF+LRAA SS RALVARAKLHDEPLMC DIAP+ G XXXXXX NS AIAVR+TF+L TPGMACVESRGDG LFACGGWDARVRLYRWARPAPLAVLACHEDTV+SIAFHPDAAAT Sbjct: 20 CTAIQINRTLIQSRDGTIAVWDSKRLASGDTGAGRCGLISTGAHHFCQIVLPRWPSADSSXXXXXXXXXX--AALPPQCVLAPCEEQSRVQLWDLRAQAPQLTIDAPTDAADGSKSAGMVMCCRLLGGGARPLAAAGYEDGSLACFELRAAAAAS------SSTRALVARAKLHDEPLMCLDIAPDQQLSE-----------------------GXXXXXXXXXXXXXNSDAIAVRNTFKLPTPGMACVESRGDGTLFACGGWDARVRLYRWARPAPLAVLACHEDTVSSIAFHPDAAAT 288
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A6H5KCI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI8_9PHAE) HSP 1 Score: 207 bits (528), Expect = 3.190e-59 Identity = 150/455 (32.97%), Postives = 203/455 (44.62%), Query Frame = 1 Query: 25 PPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGD-TGAGRCGRIS----------TGAHHFCQIALPRW--------------------------------------------------------PSADSSXXXXXXXXXXXX-AALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGG---ARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMY 1176 PP PV LRGHT+G+ + YL D+LL+GSEDG V++W L+RRR A A H G+ R+D + + + Q RD I +WD+E LA+G +G G R S TGA HFCQ AL RW PSA + ++ + +LAPC +Q+ + LWDLR P + AP DA + GMVMC RLLG A P A G++ G L +DLRA +S L+ ++LH PL+C D+ + G S SA + VF+L + +SC G+ V +F L PG +CVE R D LF GGWD RVR + W P PLAVL HE V ++A+ P G +GS D R+++W +Y Sbjct: 8 PPVPVTVLRGHTSGVHASCYLKEDILLTGSEDGVVKLWNLERRRAFAEFEAT----SHGMGVQRLD--HLGRGKIVSQGRDMLIKVWDAESLAAGGGSGVGSSSRASITPQPLQVLPTGAFHFCQFALTRWREEARPKGKESTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQTGREGDAAEPAPSAAADDGEAQQGSFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTF-APKDA----EQKGMVMCVRLLGESPSCASPFAVVGHDAGHLCVYDLRA-----------TSAEPLL-ESRLHKVPLLCVDVGSSCRQGVSGSADESINVFTLSTRKASC-------------------GSCEVVKSFRLEHPGTSCVEIRRDQKLFVSGGWDHRVRAFSWKTPRPLAVLRSHEKNVHTVAYSPR---IGGLVSGSGDSRVAVWELY 417
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: W7TYP4_9STRA (Guanine nucleotide-binding protein subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYP4_9STRA) HSP 1 Score: 150 bits (378), Expect = 8.140e-38 Identity = 130/431 (30.16%), Postives = 185/431 (42.92%), Query Frame = 1 Query: 1 MDLTTLGAPPGPVAQLRGHTAGIQSVQYLSSD-------------VLLSGSEDGEVRVWQLKRRRPLA----------VLSANPSGGGHQHGILRIDCTAIQINRTLI-QSRDGTIAIWDSERLASGDTGAGRCGRI-------STGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLR-AQAPQLSIDAPADAADGTKSAGMVMCCRLLGGGARPL---------AAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKL-HDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIW 1167 M T PP LRGH AG+Q++ +L + +L SG DG V++W + RP V SA+PS + G+L + A R+L+ Q R GT+++WD G+CG +TG+ HFC++++ AD P Q +LAP E + QLWD+R P +S P G ++ G+ MC +LL G R A A +EDGSL +DLR +G KL E +C D+AP+ G +AGA + F+LDL C+ V+ L PG+ V+ R D L+A GGWD RVR++RW APLAVL H TV ++ F P +G +D RI++W Sbjct: 1 MTSTKAAKPPPEPFILRGHEAGVQALAFLCENHGTTSERGSDDFSLLASGDADGHVKLWDMGACRPCMSWIPARAAAQVTSASPSPATMK-GVLSLH--AFNQGRSLLTQVRGGTVSLWD----------LGKCGGTPQSLRSWATGSFHFCKVSVGEVGGAD-----------------PTQLLLAPTVESEQFQLWDMREGSRPVISFTPP-----GPQNRGLCMCLKLLLSGTRGAEDSNAGVGHALAVFEDGSLHGWDLRMLATNDRDSFKYGTGDVAAFSVKLAQKETPLCLDVAPSRRRGILGAAGADLVTFALDLALHHCQ----------------------VKQCIALKHPGVGDVKIREDEGLWAVGGWDHRVRIFRWQDGAPLAVLRGHGATVNALTFSPG---LKTLVSGGKDARIALW 371
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: D8LT91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT91_ECTSI) HSP 1 Score: 144 bits (362), Expect = 6.810e-36 Identity = 113/354 (31.92%), Postives = 155/354 (43.79%), Query Frame = 1 Query: 25 PPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGD-TGAGRCGR----------ISTGAHHFCQIALPRW--------------------------------------------------------PSADSSXXXXXXXXXXXXA---ALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGG---ARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGG 867 PP PV LRGHT+G+ + YL+ D+LL+GSEDG V++W L+RRR A A H G+ R+D + + + Q RD I +WD+E LA+G +G G R + TGA HFCQ AL RW PSA ++ + + + +LAPC +Q+ + LWDLR P + AP DA + GMVMC RLLG A P A G++ G L +DLRA +S L+ +LH PL+C D+ + G S SA + VF L + +SC GGG Sbjct: 8 PPVPVTVLRGHTSGVHASCYLNEDILLTGSEDGVVKLWNLERRRAFAKFEAT----SHGMGVQRLD--HLGRGKIVSQGRDMLIKVWDAESLAAGGGSGVGSSSRAAITPQPLQVLPTGAFHFCQFALTRWRDEARPKGKESTNSSXXXXXXXDPXXXXXXXXXQGEEERSPPCGQTGREGEAAEPAPSAAAAANDGEAQQGSFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTF-APKDA----EQKGMVMCVRLLGESPSCASPFAVVGHDAGHLCVYDLRA-----------TSAEPLL-EMRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGGGG 338
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A8C9SAH5_SCLFO (G protein subunit beta 1 like n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9SAH5_SCLFO) HSP 1 Score: 139 bits (351), Expect = 1.520e-34 Identity = 126/394 (31.98%), Postives = 173/394 (43.91%), Query Frame = 1 Query: 25 PPGPVAQLRGHTAGIQSVQYL----SSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLI-QSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLA-PCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLL--GGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAF--HPDAAATGEFAAGSRDCRISIWRMY 1176 PP P+ LRG A I ++ + SS +L SGS G + VW L RR VL GH G + I TLI Q+RD + W+ S T + I TG+ FCQ ++ PQ+ +LA P E+ ++L +L + P S+ A GM+MC +L GG P+ AGYEDGSLA +D+ + R +++R H EPL+C D P G S SA V + LD Q + + +R T EL PG++ + R D + A GWD R+RL+ W + PLAVL H DT + F H D+ G AAGS+D RISIW +Y Sbjct: 5 PPTPLFVLRGSGAPINTLHFSCQEPSSALLFSGSGKGAIHVWNLHTRRAERVLE------GHG-GSSIVWVNTIGSKETLISQARDKRLCTWNLSEGRSDVTQS-----IFTGSVGFCQGSVMEMH--------------------PQRWLLAYPAEDMEEVKLVELPSGVPVCSLKPDA-------KLGMLMCVKLWQPDGGCGPMLLAGYEDGSLALWDV--------------AQRQILSRLTTHPEPLLCLDFDPVGLRGVSGSAERAVSSWVLDGQQN-----------------------LQLRDTVELVNPGISQLRLRMDRRILASAGWDHRIRLFSWKKLKPLAVLQYHTDTALCVTFSDHKDSR-LGLMAAGSKDQRISIWSVY 321
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A8B7X1D2_MICMU (guanine nucleotide-binding protein subunit beta-like protein 1 n=2 Tax=Microcebus murinus TaxID=30608 RepID=A0A8B7X1D2_MICMU) HSP 1 Score: 139 bits (351), Expect = 2.390e-34 Identity = 122/400 (30.50%), Postives = 168/400 (42.00%), Query Frame = 1 Query: 16 LGAPPGPVAQLRGHTAGIQSVQYLSS------DVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIAL-----PRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRL--LGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMY 1176 L PP P LRG + + ++ + +L SGS+DG V +W L+ RR +A L GH + T Q ++ L Q RD + +WD LA G R+ + FC+ A+ PRW A P + +Q+ ++ ++ ++ ADA GM MC L RPL AGYEDGS+A +D+ S R + + H+EP+M D P A G S SAG + V+SLD A+ V T EL G+A V R D + A GWD RVR++ W PLAVLA H V +AF AA G AAGS+D RIS+W +Y Sbjct: 5 LSPPPDPQFVLRGTQSPVHALHFCRGAQAQGCPLLFSGSQDGLVHIWSLQTRRAVAALD------GHGGQCVTWLQTLPQGHQLLSQGRDLKLCLWD---LAEGRNTVVDSVRLESVG--FCKSAILAGGQPRWTLA------------------------VPGKASDEVQILEMPSKTSVCTLKPEADA-----KPGMPMCLGLWQADSSPRPLLLAGYEDGSVALWDI--------------SERKMCSHVSCHEEPVMGLDFDPEKARGVSGSAGKALAVWSLD-----------------------GRQALQVHGTHELTNAGVAEVAIRPDRRVLATAGWDHRVRVFHWRTMRPLAVLASHSAAVQCVAF---AATGGLLAAGSKDQRISVWSLY 324
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: F1MBU4_BOVIN (G protein subunit beta 1 like n=9 Tax=Bovidae TaxID=9895 RepID=F1MBU4_BOVIN) HSP 1 Score: 138 bits (347), Expect = 5.340e-34 Identity = 125/395 (31.65%), Postives = 173/395 (43.80%), Query Frame = 1 Query: 16 LGAP-PGPVAQLRGHTAGIQSVQYLSS----DVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLA-PCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRL--LGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMY 1176 + AP P P LRG + + ++ + +LLSGS G V VW L+ RRPLA L GH + T Q + L Q RD + +WD LA G + + FC+ ++ A PQ+ +LA P +Q+ +L ++ + A A GM MC +L RPL AGYEDGSLA +D+ S R + +R H EP+M + P A G S SA ++ V+SL+ Q A+ VR T EL PG+A ++ R D + A GWD RVR+++W PLAVLA H TV +AF+ TG AAGS D RIS+W +Y Sbjct: 1 MAAPVPNPQFVLRGARSAVHALHFCHGAQGHPLLLSGSLRGLVHVWSLQTRRPLAALD------GHGGQCVTWLHTLPQGPQLLSQGRDLQLCVWD---LAEGRNAV--VDAVHLESVGFCRASV--------------------LAEGPQRWMLAVPGRGSDEVQVLELPSKTSVSCLKPEAGA-----RLGMPMCLQLWQAESSPRPLLLAGYEDGSLALWDV--------------SARKVCSRVACHSEPVMALALDPRRARGVSGSAEKVLAVWSLEGQ-----------------------QALQVRGTHELINPGIADLKIRPDSKILATAGWDHRVRVFQWRTMKPLAVLAFHSATVHCVAFNT----TGLLAAGSGDQRISVWSLY 318
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A1S3GDX0_DIPOR (guanine nucleotide-binding protein subunit beta-like protein 1 n=3 Tax=Heteromyidae TaxID=10015 RepID=A0A1S3GDX0_DIPOR) HSP 1 Score: 138 bits (347), Expect = 9.140e-34 Identity = 120/395 (30.38%), Postives = 175/395 (44.30%), Query Frame = 1 Query: 16 LGAPPGPVAQLRGHTAGIQSVQYL------SSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGG--ARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMY 1176 L PP P LRG + + ++ + S +L SGS+ G V +W L+ RR + +L + GG L+ + Q ++ L Q RD + +WD LA G + + FC+ ++ AD P + P ++ +Q+ ++ ++ ++ ADA GM MC RL +RPL AGYEDGS+A +D+ S R + ++ H+EP+M D A G S SAG + V+SLD Q S + V ST EL PG+A V R D L A GWD R+R++ W PLAVL H +V +AF AA G AAGS+D RIS+W +Y Sbjct: 5 LQPPPDPQFVLRGVQSAVNALHFCRESQAQGSSLLFSGSQSGLVHIWNLQTRRAVTILDGH---GGQSVTWLQ---SLPQGSQLLSQGRDLQLCLWD---LAEGRNAI--VDSVHLESVGFCKSSI----LADGQ---------------PCWMLAVPGKDTDEVQILEMPSKTSVCTLKPEADA-----KPGMPMCLRLWQANCSSRPLLLAGYEDGSVALWDI--------------SERKVCSQVSCHEEPVMGLDFDSQKARGVSGSAGKALAVWSLDGQPS-----------------------LQVCSTHELTNPGIAEVTIRPDHKLLATAGWDHRIRVFHWKTMKPLAVLGFHSASVHCVAF----AANGLLAAGSKDQRISVWSLY 323
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A6P7D2M9_SHEEP (guanine nucleotide-binding protein subunit beta-like protein 1 n=3 Tax=Ovis aries TaxID=9940 RepID=A0A6P7D2M9_SHEEP) HSP 1 Score: 137 bits (344), Expect = 1.440e-33 Identity = 127/395 (32.15%), Postives = 175/395 (44.30%), Query Frame = 1 Query: 16 LGAP-PGPVAQLRGHTAGIQSVQYLSS----DVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLA-PCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRL--LGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMY 1176 + AP P P LRG + ++++ + S +LLSGS G V +W L+ RRPLA L GH + T + + L Q RD + +WD LA G R+ + FC+ ++ A PQ+ LA P +Q+ +L ++ + A A GM MC +L RPL AGYEDGSLA +D+ S R + +RA H EP+M + P A G S SA + V+SL+ Q A+ VR T EL PG+A ++ R D + A GWD RVR+++W PLAVLA H TV +AF ATG AAGS D RIS+W +Y Sbjct: 1 MAAPAPDPQFILRGAGSAVRALHFCSGAQGRPLLLSGSLRGLVHIWNLETRRPLAALD------GHGGQCVTWLHTLPRGPQLLSQGRDLQLCVWD---LAEGRGAVVDAVRLESVG--FCRASV--------------------LAEGPQRWTLAVPGRGSDEVQILELPSKTLVSCLKPEAGA-----RLGMPMCLQLWQAESSPRPLLLAGYEDGSLALWDV--------------SMRKVCSRAACHSEPVMGLALDPRRARGVSGSAEKALAVWSLEGQ-----------------------QALQVRGTHELTNPGIADLKIRPDSKILATAGWDHRVRVFQWRTMRPLAVLAFHSATVHCVAFD----ATGLLAAGSGDQRISVWSLY 318 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11414 ID=mRNA_11414|Name=jgi.p|Trimin1|338169|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1185bp|location=Sequence derived from alignment at Contig_90:137203..138682- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGATCTCACCACTCTAGGCGCGCCACCTGGGCCCGTTGCGCAGCTGCGback to top protein sequence of jgi.p|Trimin1|338169 >Trimin1|338169|MIX46932_6_38 ID=Trimin1|338169|MIX46932_6_38|Name=jgi.p|Trimin1|338169|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=395bp MDLTTLGAPPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKRback to top mRNA from alignment at Contig_90:137203..138682- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11414 ID=mRNA_11414|Name=jgi.p|Trimin1|338169|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1480bp|location=Sequence derived from alignment at Contig_90:137203..138682- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_90:137203..138682- >mRNA_11414 ID=mRNA_11414|Name=jgi.p|Trimin1|338169|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1185bp|location=Sequence derived from alignment at Contig_90:137203..138682- (Tribonema minus UTEX_B_3156 )back to top |