mRNA_11414 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|338169
Unique NamemRNA_11414
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A835YJ38_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ38_9STRA)

HSP 1 Score: 722 bits (1864), Expect = 5.350e-262
Identity = 394/394 (100.00%), Postives = 394/394 (100.00%), Query Frame = 1
Query:    1 MDLTTLGAPPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMYGG 1182
            MDLTTLGAPPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMYGG
Sbjct:    1 MDLTTLGAPPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMYGG 394          
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A835YXT7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT7_9STRA)

HSP 1 Score: 409 bits (1051), Expect = 5.870e-140
Identity = 234/300 (78.00%), Postives = 244/300 (81.33%), Query Frame = 1
Query:  223 CTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAAT 1122
            CTAIQINRTLIQSRDGTIA+WDS+RLASGDTGAGRCG ISTGAHHFCQI LPRWPSADSSXXXXXXXXXX  AALP QCVLAPCEEQSR+QLWDLRAQAPQL+IDAP DAADG+KSAGMVMCCRLLGGGARPLAAAGYEDGSLACF+LRAA          SS RALVARAKLHDEPLMC DIAP+                            G     XXXXXX  NS AIAVR+TF+L TPGMACVESRGDG LFACGGWDARVRLYRWARPAPLAVLACHEDTV+SIAFHPDAAAT
Sbjct:   20 CTAIQINRTLIQSRDGTIAVWDSKRLASGDTGAGRCGLISTGAHHFCQIVLPRWPSADSSXXXXXXXXXX--AALPPQCVLAPCEEQSRVQLWDLRAQAPQLTIDAPTDAADGSKSAGMVMCCRLLGGGARPLAAAGYEDGSLACFELRAAAAAS------SSTRALVARAKLHDEPLMCLDIAPDQQLSE-----------------------GXXXXXXXXXXXXXNSDAIAVRNTFKLPTPGMACVESRGDGTLFACGGWDARVRLYRWARPAPLAVLACHEDTVSSIAFHPDAAAT 288          
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A6H5KCI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI8_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 3.190e-59
Identity = 150/455 (32.97%), Postives = 203/455 (44.62%), Query Frame = 1
Query:   25 PPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGD-TGAGRCGRIS----------TGAHHFCQIALPRW--------------------------------------------------------PSADSSXXXXXXXXXXXX-AALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGG---ARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMY 1176
            PP PV  LRGHT+G+ +  YL  D+LL+GSEDG V++W L+RRR  A   A      H  G+ R+D   +   + + Q RD  I +WD+E LA+G  +G G   R S          TGA HFCQ AL RW                                                        PSA +              ++  +  +LAPC +Q+ + LWDLR   P  +  AP DA    +  GMVMC RLLG     A P A  G++ G L  +DLRA           +S   L+  ++LH  PL+C D+  +   G S SA   + VF+L  + +SC                   G+  V  +F L  PG +CVE R D  LF  GGWD RVR + W  P PLAVL  HE  V ++A+ P     G   +GS D R+++W +Y
Sbjct:    8 PPVPVTVLRGHTSGVHASCYLKEDILLTGSEDGVVKLWNLERRRAFAEFEAT----SHGMGVQRLD--HLGRGKIVSQGRDMLIKVWDAESLAAGGGSGVGSSSRASITPQPLQVLPTGAFHFCQFALTRWREEARPKGKESTNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGQTGREGDAAEPAPSAAADDGEAQQGSFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTF-APKDA----EQKGMVMCVRLLGESPSCASPFAVVGHDAGHLCVYDLRA-----------TSAEPLL-ESRLHKVPLLCVDVGSSCRQGVSGSADESINVFTLSTRKASC-------------------GSCEVVKSFRLEHPGTSCVEIRRDQKLFVSGGWDHRVRAFSWKTPRPLAVLRSHEKNVHTVAYSPR---IGGLVSGSGDSRVAVWELY 417          
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: W7TYP4_9STRA (Guanine nucleotide-binding protein subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYP4_9STRA)

HSP 1 Score: 150 bits (378), Expect = 8.140e-38
Identity = 130/431 (30.16%), Postives = 185/431 (42.92%), Query Frame = 1
Query:    1 MDLTTLGAPPGPVAQLRGHTAGIQSVQYLSSD-------------VLLSGSEDGEVRVWQLKRRRPLA----------VLSANPSGGGHQHGILRIDCTAIQINRTLI-QSRDGTIAIWDSERLASGDTGAGRCGRI-------STGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLR-AQAPQLSIDAPADAADGTKSAGMVMCCRLLGGGARPL---------AAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKL-HDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIW 1167
            M  T    PP     LRGH AG+Q++ +L  +             +L SG  DG V++W +   RP            V SA+PS    + G+L +   A    R+L+ Q R GT+++WD           G+CG         +TG+ HFC++++     AD                 P Q +LAP  E  + QLWD+R    P +S   P     G ++ G+ MC +LL  G R           A A +EDGSL  +DLR             +G       KL   E  +C D+AP+   G   +AGA +  F+LDL    C+                      V+    L  PG+  V+ R D  L+A GGWD RVR++RW   APLAVL  H  TV ++ F P         +G +D RI++W
Sbjct:    1 MTSTKAAKPPPEPFILRGHEAGVQALAFLCENHGTTSERGSDDFSLLASGDADGHVKLWDMGACRPCMSWIPARAAAQVTSASPSPATMK-GVLSLH--AFNQGRSLLTQVRGGTVSLWD----------LGKCGGTPQSLRSWATGSFHFCKVSVGEVGGAD-----------------PTQLLLAPTVESEQFQLWDMREGSRPVISFTPP-----GPQNRGLCMCLKLLLSGTRGAEDSNAGVGHALAVFEDGSLHGWDLRMLATNDRDSFKYGTGDVAAFSVKLAQKETPLCLDVAPSRRRGILGAAGADLVTFALDLALHHCQ----------------------VKQCIALKHPGVGDVKIREDEGLWAVGGWDHRVRIFRWQDGAPLAVLRGHGATVNALTFSPG---LKTLVSGGKDARIALW 371          
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: D8LT91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT91_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 6.810e-36
Identity = 113/354 (31.92%), Postives = 155/354 (43.79%), Query Frame = 1
Query:   25 PPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGD-TGAGRCGR----------ISTGAHHFCQIALPRW--------------------------------------------------------PSADSSXXXXXXXXXXXXA---ALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGG---ARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGG 867
            PP PV  LRGHT+G+ +  YL+ D+LL+GSEDG V++W L+RRR  A   A      H  G+ R+D   +   + + Q RD  I +WD+E LA+G  +G G   R          + TGA HFCQ AL RW                                                        PSA ++            +   +  +  +LAPC +Q+ + LWDLR   P  +  AP DA    +  GMVMC RLLG     A P A  G++ G L  +DLRA           +S   L+   +LH  PL+C D+  +   G S SA   + VF L  + +SC GGG
Sbjct:    8 PPVPVTVLRGHTSGVHASCYLNEDILLTGSEDGVVKLWNLERRRAFAKFEAT----SHGMGVQRLD--HLGRGKIVSQGRDMLIKVWDAESLAAGGGSGVGSSSRAAITPQPLQVLPTGAFHFCQFALTRWRDEARPKGKESTNSSXXXXXXXDPXXXXXXXXXQGEEERSPPCGQTGREGEAAEPAPSAAAAANDGEAQQGSFLSDESSFAENVMLAPCGQQTLVSLWDLRKARPSFTF-APKDA----EQKGMVMCVRLLGESPSCASPFAVVGHDAGHLCVYDLRA-----------TSAEPLL-EMRLHKAPLLCVDVGSSCRQGVSGSADESINVFRLSTRKASCGGGG 338          
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A8C9SAH5_SCLFO (G protein subunit beta 1 like n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9SAH5_SCLFO)

HSP 1 Score: 139 bits (351), Expect = 1.520e-34
Identity = 126/394 (31.98%), Postives = 173/394 (43.91%), Query Frame = 1
Query:   25 PPGPVAQLRGHTAGIQSVQYL----SSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLI-QSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLA-PCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLL--GGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAF--HPDAAATGEFAAGSRDCRISIWRMY 1176
            PP P+  LRG  A I ++ +     SS +L SGS  G + VW L  RR   VL       GH  G   +    I    TLI Q+RD  +  W+     S  T +     I TG+  FCQ ++                        PQ+ +LA P E+   ++L +L +  P  S+   A         GM+MC +L    GG  P+  AGYEDGSLA +D+              + R +++R   H EPL+C D  P    G S SA   V  + LD Q +                       + +R T EL  PG++ +  R D  + A  GWD R+RL+ W +  PLAVL  H DT   + F  H D+   G  AAGS+D RISIW +Y
Sbjct:    5 PPTPLFVLRGSGAPINTLHFSCQEPSSALLFSGSGKGAIHVWNLHTRRAERVLE------GHG-GSSIVWVNTIGSKETLISQARDKRLCTWNLSEGRSDVTQS-----IFTGSVGFCQGSVMEMH--------------------PQRWLLAYPAEDMEEVKLVELPSGVPVCSLKPDA-------KLGMLMCVKLWQPDGGCGPMLLAGYEDGSLALWDV--------------AQRQILSRLTTHPEPLLCLDFDPVGLRGVSGSAERAVSSWVLDGQQN-----------------------LQLRDTVELVNPGISQLRLRMDRRILASAGWDHRIRLFSWKKLKPLAVLQYHTDTALCVTFSDHKDSR-LGLMAAGSKDQRISIWSVY 321          
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A8B7X1D2_MICMU (guanine nucleotide-binding protein subunit beta-like protein 1 n=2 Tax=Microcebus murinus TaxID=30608 RepID=A0A8B7X1D2_MICMU)

HSP 1 Score: 139 bits (351), Expect = 2.390e-34
Identity = 122/400 (30.50%), Postives = 168/400 (42.00%), Query Frame = 1
Query:   16 LGAPPGPVAQLRGHTAGIQSVQYLSS------DVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIAL-----PRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRL--LGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMY 1176
            L  PP P   LRG  + + ++ +          +L SGS+DG V +W L+ RR +A L       GH    +    T  Q ++ L Q RD  + +WD   LA G        R+ +    FC+ A+     PRW  A                         P +    +Q+ ++ ++    ++   ADA       GM MC  L       RPL  AGYEDGS+A +D+              S R + +    H+EP+M  D  P  A G S SAG  + V+SLD                          A+ V  T EL   G+A V  R D  + A  GWD RVR++ W    PLAVLA H   V  +AF   AA  G  AAGS+D RIS+W +Y
Sbjct:    5 LSPPPDPQFVLRGTQSPVHALHFCRGAQAQGCPLLFSGSQDGLVHIWSLQTRRAVAALD------GHGGQCVTWLQTLPQGHQLLSQGRDLKLCLWD---LAEGRNTVVDSVRLESVG--FCKSAILAGGQPRWTLA------------------------VPGKASDEVQILEMPSKTSVCTLKPEADA-----KPGMPMCLGLWQADSSPRPLLLAGYEDGSVALWDI--------------SERKMCSHVSCHEEPVMGLDFDPEKARGVSGSAGKALAVWSLD-----------------------GRQALQVHGTHELTNAGVAEVAIRPDRRVLATAGWDHRVRVFHWRTMRPLAVLASHSAAVQCVAF---AATGGLLAAGSKDQRISVWSLY 324          
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: F1MBU4_BOVIN (G protein subunit beta 1 like n=9 Tax=Bovidae TaxID=9895 RepID=F1MBU4_BOVIN)

HSP 1 Score: 138 bits (347), Expect = 5.340e-34
Identity = 125/395 (31.65%), Postives = 173/395 (43.80%), Query Frame = 1
Query:   16 LGAP-PGPVAQLRGHTAGIQSVQYLSS----DVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLA-PCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRL--LGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMY 1176
            + AP P P   LRG  + + ++ +        +LLSGS  G V VW L+ RRPLA L       GH    +    T  Q  + L Q RD  + +WD   LA G         +   +  FC+ ++                     A  PQ+ +LA P      +Q+ +L ++     +   A A       GM MC +L       RPL  AGYEDGSLA +D+              S R + +R   H EP+M   + P  A G S SA  ++ V+SL+ Q                        A+ VR T EL  PG+A ++ R D  + A  GWD RVR+++W    PLAVLA H  TV  +AF+     TG  AAGS D RIS+W +Y
Sbjct:    1 MAAPVPNPQFVLRGARSAVHALHFCHGAQGHPLLLSGSLRGLVHVWSLQTRRPLAALD------GHGGQCVTWLHTLPQGPQLLSQGRDLQLCVWD---LAEGRNAV--VDAVHLESVGFCRASV--------------------LAEGPQRWMLAVPGRGSDEVQVLELPSKTSVSCLKPEAGA-----RLGMPMCLQLWQAESSPRPLLLAGYEDGSLALWDV--------------SARKVCSRVACHSEPVMALALDPRRARGVSGSAEKVLAVWSLEGQ-----------------------QALQVRGTHELINPGIADLKIRPDSKILATAGWDHRVRVFQWRTMKPLAVLAFHSATVHCVAFNT----TGLLAAGSGDQRISVWSLY 318          
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A1S3GDX0_DIPOR (guanine nucleotide-binding protein subunit beta-like protein 1 n=3 Tax=Heteromyidae TaxID=10015 RepID=A0A1S3GDX0_DIPOR)

HSP 1 Score: 138 bits (347), Expect = 9.140e-34
Identity = 120/395 (30.38%), Postives = 175/395 (44.30%), Query Frame = 1
Query:   16 LGAPPGPVAQLRGHTAGIQSVQYL------SSDVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLLGGG--ARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMY 1176
            L  PP P   LRG  + + ++ +        S +L SGS+ G V +W L+ RR + +L  +   GG     L+   +  Q ++ L Q RD  + +WD   LA G         +   +  FC+ ++     AD                 P   +  P ++   +Q+ ++ ++    ++   ADA       GM MC RL      +RPL  AGYEDGS+A +D+              S R + ++   H+EP+M  D     A G S SAG  + V+SLD Q S                       + V ST EL  PG+A V  R D  L A  GWD R+R++ W    PLAVL  H  +V  +AF    AA G  AAGS+D RIS+W +Y
Sbjct:    5 LQPPPDPQFVLRGVQSAVNALHFCRESQAQGSSLLFSGSQSGLVHIWNLQTRRAVTILDGH---GGQSVTWLQ---SLPQGSQLLSQGRDLQLCLWD---LAEGRNAI--VDSVHLESVGFCKSSI----LADGQ---------------PCWMLAVPGKDTDEVQILEMPSKTSVCTLKPEADA-----KPGMPMCLRLWQANCSSRPLLLAGYEDGSVALWDI--------------SERKVCSQVSCHEEPVMGLDFDSQKARGVSGSAGKALAVWSLDGQPS-----------------------LQVCSTHELTNPGIAEVTIRPDHKLLATAGWDHRIRVFHWKTMKPLAVLGFHSASVHCVAF----AANGLLAAGSKDQRISVWSLY 323          
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Match: A0A6P7D2M9_SHEEP (guanine nucleotide-binding protein subunit beta-like protein 1 n=3 Tax=Ovis aries TaxID=9940 RepID=A0A6P7D2M9_SHEEP)

HSP 1 Score: 137 bits (344), Expect = 1.440e-33
Identity = 127/395 (32.15%), Postives = 175/395 (44.30%), Query Frame = 1
Query:   16 LGAP-PGPVAQLRGHTAGIQSVQYLSS----DVLLSGSEDGEVRVWQLKRRRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERLASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSXXXXXXXXXXXXAALPQQCVLA-PCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRL--LGGGARPLAAAGYEDGSLACFDLRAAXXXXXXXXXXSSGRALVARAKLHDEPLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGXXXXXXDDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPAPLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMY 1176
            + AP P P   LRG  + ++++ + S      +LLSGS  G V +W L+ RRPLA L       GH    +    T  +  + L Q RD  + +WD   LA G        R+ +    FC+ ++                     A  PQ+  LA P      +Q+ +L ++     +   A A       GM MC +L       RPL  AGYEDGSLA +D+              S R + +RA  H EP+M   + P  A G S SA   + V+SL+ Q                        A+ VR T EL  PG+A ++ R D  + A  GWD RVR+++W    PLAVLA H  TV  +AF     ATG  AAGS D RIS+W +Y
Sbjct:    1 MAAPAPDPQFILRGAGSAVRALHFCSGAQGRPLLLSGSLRGLVHIWNLETRRPLAALD------GHGGQCVTWLHTLPRGPQLLSQGRDLQLCVWD---LAEGRGAVVDAVRLESVG--FCRASV--------------------LAEGPQRWTLAVPGRGSDEVQILELPSKTLVSCLKPEAGA-----RLGMPMCLQLWQAESSPRPLLLAGYEDGSLALWDV--------------SMRKVCSRAACHSEPVMGLALDPRRARGVSGSAEKALAVWSLEGQ-----------------------QALQVRGTHELTNPGIADLKIRPDSKILATAGWDHRVRVFQWRTMRPLAVLAFHSATVHCVAFD----ATGLLAAGSGDQRISVWSLY 318          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|338169 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJ38_9STRA5.350e-262100.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A835YXT7_9STRA5.870e-14078.00WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6H5KCI8_9PHAE3.190e-5932.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TYP4_9STRA8.140e-3830.16Guanine nucleotide-binding protein subunit beta n=... [more]
D8LT91_ECTSI6.810e-3631.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8C9SAH5_SCLFO1.520e-3431.98G protein subunit beta 1 like n=2 Tax=Scleropages ... [more]
A0A8B7X1D2_MICMU2.390e-3430.50guanine nucleotide-binding protein subunit beta-li... [more]
F1MBU4_BOVIN5.340e-3431.65G protein subunit beta 1 like n=9 Tax=Bovidae TaxI... [more]
A0A1S3GDX0_DIPOR9.140e-3430.38guanine nucleotide-binding protein subunit beta-li... [more]
A0A6P7D2M9_SHEEP1.440e-3332.15guanine nucleotide-binding protein subunit beta-li... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_90contigContig_90:137203..138682 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|338169|MIX46932_6_38
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007154,GO:0007165,GO:0007186,GO:0007610,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0023052,GO:0035176,GO:0035556,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051703,GO:0051704,GO:0051705,GO:0051716,GO:0065007,GO:0071944,GO:0098552,GO:0098562
Preferred nameGNB1L
DescriptionGuanine nucleotide-binding protein subunit beta-like protein
COG categoryS
Max annot lvl33208|Metazoa
EggNOG OGsCOG2319@1|root,KOG0322@2759|Eukaryota,399NZ@33154|Opisthokonta,3BA3B@33208|Metazoa,3D46N@33213|Bilateria,487KD@7711|Chordata,493ZD@7742|Vertebrata,3J6EH@40674|Mammalia,35A9Z@314146|Euarchontoglires,4PTXR@9989|Rodentia
Evalue6.72e-37
Seed ortholog79684.XP_005370005.1
Hectar predicted targeting categoryother localisation
TranscriptId338491
TrackFilteredModels1
ProteinId338169
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338169gene_11414Tribonema minus UTEX_B_3156 geneContig_90 137203..138682 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|338169Trimin1|338169|MIX46932_6_38Tribonema minus UTEX_B_3156 polypeptideContig_90 137203..138682 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11414_2exon_11414_2Tribonema minus UTEX_B_3156 exonContig_90 137203..138277 -
exon_11414_1exon_11414_1Tribonema minus UTEX_B_3156 exonContig_90 138573..138682 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11414CDS_11414Tribonema minus UTEX_B_3156 CDSContig_90 138573..138682 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11414 ID=mRNA_11414|Name=jgi.p|Trimin1|338169|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1185bp|location=Sequence derived from alignment at Contig_90:137203..138682- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGATCTCACCACTCTAGGCGCGCCACCTGGGCCCGTTGCGCAGCTGCG
AGGTCACACAGCCGGCATTCAATCAGTGCAGTACCTCAGCTCTGATGTGC
TGCTCTCAGGATCCGAGGACGGCGAGGTCAGGGTATGGCAGCTCAAGCGC
CGTCGCCCGCTGGCTGTGCTCTCAGCAAATCCCAGCGGGGGTGGTCATCA
GCACGGCATCCTGCGCATTGACTGCACCGCCATACAGATCAATCGCACAT
TGATCCAATCTCGTGACGGCACCATAGCCATCTGGGACAGCGAAAGGCTC
GCCAGCGGCGACACGGGCGCCGGGCGCTGCGGCCGCATCAGCACCGGCGC
GCACCACTTCTGCCAGATCGCGCTGCCGCGGTGGCCGAGCGCTGACAGCA
GCAGCAGCAGCAGCAGCGGCGGCGGCGGCGCAGCGACTGCAGCACTGCCG
CAGCAGTGCGTGCTGGCGCCCTGCGAGGAGCAGAGTCGGCTGCAGCTCTG
GGACCTGCGTGCGCAAGCCCCTCAGCTGAGCATCGATGCACCGGCTGACG
CCGCGGACGGCACCAAGTCTGCCGGCATGGTCATGTGCTGCCGACTTCTC
GGCGGAGGCGCGCGTCCGCTGGCGGCGGCCGGCTACGAGGACGGGTCGCT
GGCGTGCTTCGACTTGCGCGCTGCTGCCGCCAGCAGCAGCAGCAGCAGCG
GAAGCAGCAGCGGCAGAGCGCTGGTGGCCCGCGCCAAGCTTCACGACGAG
CCATTGATGTGCTTTGACATAGCGCCCAACATGGCGGCGGGCGCATCGGC
ATCGGCGGGAGCTCTCGTGCGCGTCTTCTCCCTTGACCTGCAAGGCAGCA
GCTGCAAAGGCGGAGGCGACAGCGGTGTTGGCGGCGGCGGCAGCGGAGGC
GACGACAACAGCGGCGCCATTGCCGTGCGCAGCACGTTCGAGCTGGCAAC
GCCGGGCATGGCGTGCGTGGAGAGCAGAGGCGACGGCGCGCTGTTCGCAT
GCGGCGGGTGGGATGCGCGCGTGCGGCTGTACCGGTGGGCGCGGCCGGCG
CCGCTGGCGGTCCTCGCGTGCCACGAGGACACCGTGGCGAGCATCGCCTT
CCACCCCGACGCCGCGGCGACGGGCGAGTTCGCGGCGGGCTCGCGCGACT
GCCGCATCTCCATCTGGCGCATGTACGGCGGCTGA
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protein sequence of jgi.p|Trimin1|338169

>Trimin1|338169|MIX46932_6_38 ID=Trimin1|338169|MIX46932_6_38|Name=jgi.p|Trimin1|338169|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=395bp
MDLTTLGAPPGPVAQLRGHTAGIQSVQYLSSDVLLSGSEDGEVRVWQLKR
RRPLAVLSANPSGGGHQHGILRIDCTAIQINRTLIQSRDGTIAIWDSERL
ASGDTGAGRCGRISTGAHHFCQIALPRWPSADSSSSSSSGGGGAATAALP
QQCVLAPCEEQSRLQLWDLRAQAPQLSIDAPADAADGTKSAGMVMCCRLL
GGGARPLAAAGYEDGSLACFDLRAAAASSSSSSGSSSGRALVARAKLHDE
PLMCFDIAPNMAAGASASAGALVRVFSLDLQGSSCKGGGDSGVGGGGSGG
DDNSGAIAVRSTFELATPGMACVESRGDGALFACGGWDARVRLYRWARPA
PLAVLACHEDTVASIAFHPDAAATGEFAAGSRDCRISIWRMYGG*
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mRNA from alignment at Contig_90:137203..138682-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11414 ID=mRNA_11414|Name=jgi.p|Trimin1|338169|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1480bp|location=Sequence derived from alignment at Contig_90:137203..138682- (Tribonema minus UTEX_B_3156 )
ATGGATCTCACCACTCTAGGCGCGCCACCTGGGCCCGTTGCGCAGCTGCG AGGTCACACAGCCGGCATTCAATCAGTGCAGTACCTCAGCTCTGATGTGC TGCTCTCAGGGTACGCACAAAGTTCAAGTGTTTGTTGTCTACACTTCGTT CAGAGGCTGCTGCCGCGCCACAGTCCAGCTTGATGCTTGTCTACAGCAGC GCATCATCATGCCTGCCTGTTGCAGTACTGATTTGCTGGTTAGAACAATT ATTTTATGTGGCCGGCCGCAGCTGAACAATCAAGAGGACGTGTCATGCAC ATTGTTGTTTCGTCTTGCTTGCACTGCTGTGTCGTATACACGGAAAGTCA ATCACTGCGACTAGGTCAACAAGCACTTTTTTTCCTGACCGCCCTGCTGC GTCAGATCCGAGGACGGCGAGGTCAGGGTATGGCAGCTCAAGCGCCGTCG CCCGCTGGCTGTGCTCTCAGCAAATCCCAGCGGGGGTGGTCATCAGCACG GCATCCTGCGCATTGACTGCACCGCCATACAGATCAATCGCACATTGATC CAATCTCGTGACGGCACCATAGCCATCTGGGACAGCGAAAGGCTCGCCAG CGGCGACACGGGCGCCGGGCGCTGCGGCCGCATCAGCACCGGCGCGCACC ACTTCTGCCAGATCGCGCTGCCGCGGTGGCCGAGCGCTGACAGCAGCAGC AGCAGCAGCAGCGGCGGCGGCGGCGCAGCGACTGCAGCACTGCCGCAGCA GTGCGTGCTGGCGCCCTGCGAGGAGCAGAGTCGGCTGCAGCTCTGGGACC TGCGTGCGCAAGCCCCTCAGCTGAGCATCGATGCACCGGCTGACGCCGCG GACGGCACCAAGTCTGCCGGCATGGTCATGTGCTGCCGACTTCTCGGCGG AGGCGCGCGTCCGCTGGCGGCGGCCGGCTACGAGGACGGGTCGCTGGCGT GCTTCGACTTGCGCGCTGCTGCCGCCAGCAGCAGCAGCAGCAGCGGAAGC AGCAGCGGCAGAGCGCTGGTGGCCCGCGCCAAGCTTCACGACGAGCCATT GATGTGCTTTGACATAGCGCCCAACATGGCGGCGGGCGCATCGGCATCGG CGGGAGCTCTCGTGCGCGTCTTCTCCCTTGACCTGCAAGGCAGCAGCTGC AAAGGCGGAGGCGACAGCGGTGTTGGCGGCGGCGGCAGCGGAGGCGACGA CAACAGCGGCGCCATTGCCGTGCGCAGCACGTTCGAGCTGGCAACGCCGG GCATGGCGTGCGTGGAGAGCAGAGGCGACGGCGCGCTGTTCGCATGCGGC GGGTGGGATGCGCGCGTGCGGCTGTACCGGTGGGCGCGGCCGGCGCCGCT GGCGGTCCTCGCGTGCCACGAGGACACCGTGGCGAGCATCGCCTTCCACC CCGACGCCGCGGCGACGGGCGAGTTCGCGGCGGGCTCGCGCGACTGCCGC ATCTCCATCTGGCGCATGTACGGCGGCTGA
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Coding sequence (CDS) from alignment at Contig_90:137203..138682-

>mRNA_11414 ID=mRNA_11414|Name=jgi.p|Trimin1|338169|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1185bp|location=Sequence derived from alignment at Contig_90:137203..138682- (Tribonema minus UTEX_B_3156 )
ATGGATCTCACCACTCTAGGCGCGCCACCTGGGCCCGTTGCGCAGCTGCG
AGGTCACACAGCCGGCATTCAATCAGTGCAGTACCTCAGCTCTGATGTGC
TGCTCTCAGGATCCGAGGACGGCGAGGTCAGGGTATGGCAGCTCAAGCGC
CGTCGCCCGCTGGCTGTGCTCTCAGCAAATCCCAGCGGGGGTGGTCATCA
GCACGGCATCCTGCGCATTGACTGCACCGCCATACAGATCAATCGCACAT
TGATCCAATCTCGTGACGGCACCATAGCCATCTGGGACAGCGAAAGGCTC
GCCAGCGGCGACACGGGCGCCGGGCGCTGCGGCCGCATCAGCACCGGCGC
GCACCACTTCTGCCAGATCGCGCTGCCGCGGTGGCCGAGCGCTGACAGCA
GCAGCAGCAGCAGCAGCGGCGGCGGCGGCGCAGCGACTGCAGCACTGCCG
CAGCAGTGCGTGCTGGCGCCCTGCGAGGAGCAGAGTCGGCTGCAGCTCTG
GGACCTGCGTGCGCAAGCCCCTCAGCTGAGCATCGATGCACCGGCTGACG
CCGCGGACGGCACCAAGTCTGCCGGCATGGTCATGTGCTGCCGACTTCTC
GGCGGAGGCGCGCGTCCGCTGGCGGCGGCCGGCTACGAGGACGGGTCGCT
GGCGTGCTTCGACTTGCGCGCTGCTGCCGCCAGCAGCAGCAGCAGCAGCG
GAAGCAGCAGCGGCAGAGCGCTGGTGGCCCGCGCCAAGCTTCACGACGAG
CCATTGATGTGCTTTGACATAGCGCCCAACATGGCGGCGGGCGCATCGGC
ATCGGCGGGAGCTCTCGTGCGCGTCTTCTCCCTTGACCTGCAAGGCAGCA
GCTGCAAAGGCGGAGGCGACAGCGGTGTTGGCGGCGGCGGCAGCGGAGGC
GACGACAACAGCGGCGCCATTGCCGTGCGCAGCACGTTCGAGCTGGCAAC
GCCGGGCATGGCGTGCGTGGAGAGCAGAGGCGACGGCGCGCTGTTCGCAT
GCGGCGGGTGGGATGCGCGCGTGCGGCTGTACCGGTGGGCGCGGCCGGCG
CCGCTGGCGGTCCTCGCGTGCCACGAGGACACCGTGGCGAGCATCGCCTT
CCACCCCGACGCCGCGGCGACGGGCGAGTTCGCGGCGGGCTCGCGCGACT
GCCGCATCTCCATCTGGCGCATGTACGGCGGCTGA
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