mRNA_11330 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|133881
Unique NamemRNA_11330
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YTJ7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ7_9STRA)

HSP 1 Score: 586 bits (1511), Expect = 8.000e-212
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 1
Query:    1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQAGACGGGNGDIESPCASRQPRPPPVSRWFGTP 861
            KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQAGACGGGNGDIESPCASRQPRPPPVSRWFGTP
Sbjct:    1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQAGACGGGNGDIESPCASRQPRPPPVSRWFGTP 287          
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A836CHV3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHV3_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.220e-80
Identity = 135/268 (50.37%), Postives = 176/268 (65.67%), Query Frame = 1
Query:    1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSS------HFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAA------NVLIDTCGTPRISDFGTS--CINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEG-RMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSD 759
            KW+LGP I  G+FG VH GL+Q+TG+LIAV +      + N   Q+  EV +M+R RH NIV YLGAELHGS + I ++++ GGS+ ++L+ FG  T  V R Y  QIL+GI YLHSCG+VH DLK        NVL+ T G  +I+DFGTS    +L    T + GTP FMAPEVLQR   GM VD+W F C ++QM+TG +PW  L L T   +LA L   +  R PPLPP + P++  LLV CF W+PA RPT++ LL S++FSD
Sbjct:    5 KWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSL-LGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 271          
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YKW2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW2_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.020e-79
Identity = 134/277 (48.38%), Postives = 183/277 (66.06%), Query Frame = 1
Query:    4 WRLGPRIGAGSFGVVHQGLDQVTGQLIAVS----------------SHFNGQRQVL-QEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSSTS-MAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQAGACG 780
            W LGP IG GSFG VH GL+Q+TG+L+A+                 +H   ++  L +EV +M +L+HRN V YLGAE    +++I +Q+I GGS+ A+L  FG ++  V R Y  Q L G++YLH+ G+VHRDLK  N+LID  GT +I+DFGTS    D ++ + M GTP FMAPE+L R D G+PVDIWGF CT++QM+T   PWH  ++ +LPALL+ +  A  RMPPLPP + P +  +LV+CF+W+PA+RPTS+QLL S    D QA   G
Sbjct:    2 WCLGPTIGRGSFGEVHMGLNQITGELMAIKVCALPLCVAHSLRQPGAHACAKQHSLPREVFIMSQLQHRNTVRYLGAESDDDKVYIFQQWIPGGSISALLARFGPLSEHVTRLYARQALRGLAYLHANGIVHRDLKGDNLLIDGEGTIKIADFGTSARVPDGAAAAEMLGTPYFMAPEMLLRCDHGLPVDIWGFACTVLQMLTNRRPWHSCRVTSLPALLSVMQAALQRMPPLPPDMSPVMRAVLVNCFRWDPAERPTSRQLLRS--LRDCQAPGIG 276          
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835Z180_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z180_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.570e-73
Identity = 126/261 (48.28%), Postives = 166/261 (63.60%), Query Frame = 1
Query:    4 WRLGPRIGAGSFGVVHQGLDQVTGQLIAV-------SSHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTS--CINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEG-RMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFS 756
            W LG +IG G+FG VH G +QVTG+LIAV               Q++ E+ +M+R  H NIV YLGAELH S + I ++++AGGS+ ++L +FGA    V   Y  Q+L+G+ YLHSCG+VHRDLK  NVLI   G  +I+DFGTS    +L  +S  + GTP FMAPEVLQR   GM VDIW F C ++QM+TG  PW  L L T   +   L   +  R+PPLPP LD +L + LV+CF W+   RPT++ LL S +FS
Sbjct:    6 WVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPW-SLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYFS 265          
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.320e-69
Identity = 121/263 (46.01%), Postives = 173/263 (65.78%), Query Frame = 1
Query:    1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAV---SSHFNGQ--RQVLQEVAMMKRLRHRNIVCYLGAELH--GSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTS-CIN--LDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSD 759
            KW+LG RI  GSFGVV+ GL++VTG+L+AV   S H + +  R++ +E+A+M++  H NIV YLGAE+     QL I ++++ GGS+ ++LR FG  +  + RRYT Q L G++YLH   VVHRD+K +N+L+D  GT +++DFG S C++   D    ++ GTP FMAPEVLQR   G  VDIW FG  ++QM+TG  PW+   + T  ALL  +   +G+ PPLP  L P+L  +L  CF W+PA RP++ QL L  F  +
Sbjct:   90 KWKLGNRIARGSFGVVYMGLNEVTGELMAVKVLSLHGSERDMRELHREMALMRQFSHPNIVSYLGAEIREEDGQLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGSNILVDDRGTVKLADFGASICVSDPADAGGGALKGTPYFMAPEVLQRKPHGPLVDIWSFGGAILQMVTGEPPWYSAGVSTPYALLQTMLERKGQPPPLPANLSPSLAAMLRRCFSWDPALRPSAAQLELDAFLQE 352          
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YJU3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU3_9STRA)

HSP 1 Score: 223 bits (567), Expect = 1.020e-68
Identity = 122/257 (47.47%), Postives = 162/257 (63.04%), Query Frame = 1
Query:    1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSHF-NGQR-----QVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTS--CINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWH---GLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLL 738
            KW LGP +G G+FG VH GLDQVTG+ IAV +   +G R     ++  E+ +M+R RH NIV YLG EL  + ++I ++++ GGS+ ++L  FGA T  V + Y  QIL G+ YLHSCG VHRDLK  NVL+   G  +I+DFGTS    +L      + GT  FMAPEVLQR   GM VD+W F C ++QM TG+ PW    G + R LP LL  +     RMPPLP  L+P +   L +CF W PA+RPT++ L+
Sbjct:    2 KWALGPELGRGAFGQVHMGLDQVTGEFIAVKACLISGGRSSTASKLSNEIRLMQRCRHVNIVQYLGTELSPAGVYIVQEWVPGGSITSILSNFGAFTQPVTQCYARQILHGLVYLHSCGTVHRDLKGDNVLVSAGGIVKIADFGTSEQLYDLQDDRGHLQGTLHFMAPEVLQRQPQGMAVDVWAFACLVLQMHTGNMPWASELGARKR-LPRLLRLMQ--AHRMPPLPNDLNPTMRAALTACFSWNPAERPTAKHLV 255          
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA)

HSP 1 Score: 219 bits (557), Expect = 4.640e-67
Identity = 117/265 (44.15%), Postives = 165/265 (62.26%), Query Frame = 1
Query:    1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVS-----SHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGS--QLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSSTSMA-----GTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSD 759
            KW+LG RI  GSFGVV+ GL++ TG L+AV             ++ +E+A+M+   H NIV YLGAE+     QL I ++++ GGS+ ++L+ FG  +  + R YT Q L+G++YLHS  VVHRD+  +N+L+D  G  +++DFG S + L  ++ S A     GTP FMAPEVLQR   GMPVD+W FG  ++QM++G  PW    + T  ALL AL    G+ PPLP  L   L   L  CF+W+PA+RPT+ +L L  F S+
Sbjct:    6 KWKLGNRIARGSFGVVYMGLNEATGALMAVKVLSLRGSDRDLHELHREMALMRAFSHPNIVSYLGAEIREEHDQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGSNILVDDHGVVKLADFGAS-LQLSDAAGSRADGALKGTPYFMAPEVLQRSAHGMPVDVWSFGGAVLQMVSGEPPWFSYGVSTPYALLQALLERRGQTPPLPADLSAGLRAFLERCFRWDPAERPTAAELALDPFLSE 269          
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A2R5G4S8_9STRA (Mitogen-activated protein kinase kinase kinase NPK1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4S8_9STRA)

HSP 1 Score: 200 bits (509), Expect = 8.860e-57
Identity = 111/268 (41.42%), Postives = 162/268 (60.45%), Query Frame = 1
Query:    1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAV----SSHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQ--LFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQS------STSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQA 768
            +W+ G  IGAGS+G V  GL++++G L+AV    +S     R + QEV +M+ LRH NIV YLG+E       + I  +++ GGS+  +L+ FG +T SVVR+YT QIL+G++YLH  GV+HRD+K AN+L+D  G  +++DFG S +    +      + S+ GTP FMAPEV+ +   G   DIW  GCT +QM++G  PW  ++  +L AL+  +       PP+P  +  AL   L+ CFQ  PA+RPT+  LL   F S   A
Sbjct:    2 RWKKGELIGAGSYGKVFVGLNELSGSLMAVKEVRASSEAEVRALQQEVGLMRSLRHENIVQYLGSEADAKLRIVSIFTEWVPGGSIAGLLQKFGGLTESVVRKYTRQILQGLAYLHRKGVIHRDIKGANILVDDRGCIKLADFGASKVLSGAAGGSILENHSLRGTPYFMAPEVITQTGHGRKADIWSVGCTTLQMVSGKPPWKSMQFGSLQALMYHICNTN-EAPPMPHDISSALRSFLMICFQRLPAERPTANSLLQHPFLSHVPA 268          
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: F0YL51_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL51_AURAN)

HSP 1 Score: 191 bits (484), Expect = 1.290e-54
Identity = 120/305 (39.34%), Postives = 172/305 (56.39%), Query Frame = 1
Query:    4 WRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSH-FNGQRQVLQEVAMMKR-------LRHRNIVCYLGAELHGSQ--LFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSST------SMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQAGA---CGGGNGDIESPCASRQPRPPPVSRWFGTP 861
            WR G  IG G+ G V+ GL++ TG +IAV    F   +Q L+E+A M+        L H NIV YLG ++      L+I  +++ GGS++A++  FG ++ ++VR+Y  Q+L G+ YLH   V+HRD+KAAN+L+D  GT +++DFG+S   +D   T      S+ GTP FMAPEV+ +   G   DIW  GCT++QM+TG  PW  L+L T  AL+  +  A+   PP+P  L   L  LL++ F  +   RPT+ QLL   F     A A     G  G +E     RQ  PP V +   TP
Sbjct:   59 WRKGDLIGTGANGRVYLGLEEDTGAIIAVKEILFTNNQQDLEELAQMQEEIELLRSLHHPNIVTYLGTDVSDDDQTLYIFTEWVPGGSIQALVTKFGKLSEAIVRKYVAQLLVGLDYLHEQQVIHRDIKAANILVDDRGTIKLADFGSSK-RMDSMGTMGNENHSLRGTPYFMAPEVIMQTGHGRKADIWSVGCTILQMVTGQPPWKSLQLGTPAALMFHIANAQAP-PPMPSALSDHLRNLLLATFSRDMNNRPTANQLLEYPFVVANGASAEAIAAGAQGLLE-----RQNAPPEVPQRESTP 356          
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YJH2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH2_9STRA)

HSP 1 Score: 187 bits (475), Expect = 3.920e-54
Identity = 108/266 (40.60%), Postives = 153/266 (57.52%), Query Frame = 1
Query:    4 WRLGPRIGAGSFGVVHQGLDQVTGQLIAVS---------SHFNGQRQVL---QEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCI--NLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPAL--LAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFF 753
            W LG  IG G+ G VH G+ + TG+LIAV          S  +G        +EV MM+ LRH N+V +LG+   G++LFI ++++ GGSL A+L +FG +   VVR Y  Q+L G++YLH+  + HRDLK AN+L+D  G  +I+DFGTS +      +   + GTP +MAPE+L +   G+PVDIW FG  +++M T  +PW       +P++  L  L   E   P LP  LD AL  +L+ CF W    RPT   LL  +F 
Sbjct:   54 WSLGKVIGRGATGTVHMGMIKDTGRLIAVKVIEMHHHARSGASGSEHAXXXXREVQMMRLLRHPNLVAFLGSTSRGNELFILQEWVPGGSLLALLSSFGRLNTKVVRHYARQVLHGLAYLHANTIAHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGNHGQLIGTPIYMAPELLFQGKHGLPVDIWAFGAAVLEMATALAPWRIQGPEGMPSIDYLRCLVAKE-HAPALPLDLDAALRSMLMQCFCWRSGDRPTCSALLAHDFL 318          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YTJ7_9STRA8.000e-212100.00Kinase-like domain-containing protein (Fragment) n... [more]
A0A836CHV3_9STRA1.220e-8050.37Kinase-like domain-containing protein (Fragment) n... [more]
A0A835YKW2_9STRA1.020e-7948.38Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835Z180_9STRA2.570e-7348.28Kinase-like domain-containing protein (Fragment) n... [more]
A0A835YLD7_9STRA1.320e-6946.01Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YJU3_9STRA1.020e-6847.47Kinase-like domain-containing protein (Fragment) n... [more]
A0A835YLS7_9STRA4.640e-6744.15Kinase-like domain-containing protein (Fragment) n... [more]
A0A2R5G4S8_9STRA8.860e-5741.42Mitogen-activated protein kinase kinase kinase NPK... [more]
F0YL51_AURAN1.290e-5439.34Protein kinase domain-containing protein n=1 Tax=A... [more]
A0A835YJH2_9STRA3.920e-5440.60Kinase-like domain-containing protein n=1 Tax=Trib... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_76contigContig_76:76626..80417 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|133881|gw1.76.50.1
GOsGO:0001101,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005802,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006950,GO:0006952,GO:0007034,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009719,GO:0009725,GO:0009737,GO:0009738,GO:0009755,GO:0009787,GO:0009788,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010646,GO:0010648,GO:0012505,GO:0016192,GO:0016197,GO:0016301,GO:0016310,GO:0016567,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0019787,GO:0023051,GO:0023052,GO:0023057,GO:0031410,GO:0031982,GO:0031984,GO:0032446,GO:0032502,GO:0032870,GO:0032940,GO:0033993,GO:0036211,GO:0040007,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043621,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045324,GO:0046903,GO:0046907,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048589,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0065007,GO:0070647,GO:0070887,GO:0071215,GO:0071229,GO:0071310,GO:0071396,GO:0071495,GO:0071704,GO:0097305,GO:0097306,GO:0097708,GO:0098791,GO:0140096,GO:1901419,GO:1901420,GO:1901564,GO:1901700,GO:1901701,GO:1905957,GO:1905958
DescriptionMAP kinase kinase kinase activity
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0198@1|root,KOG0198@2759|Eukaryota
Evalue2.11e-55
Seed ortholog44056.XP_009041158.1
Hectar predicted targeting categoryother localisation
TranscriptId134203
TrackFilteredModels1
ProteinId133881
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|133881gene_11330Tribonema minus UTEX_B_3156 geneContig_76 76626..80417 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11330_1exon_11330_1Tribonema minus UTEX_B_3156 exonContig_76 76626..76730 +
exon_11330_2exon_11330_2Tribonema minus UTEX_B_3156 exonContig_76 78097..78360 +
exon_11330_3exon_11330_3Tribonema minus UTEX_B_3156 exonContig_76 79926..80417 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11330CDS_11330Tribonema minus UTEX_B_3156 CDSContig_76 76626..76730 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|133881Trimin1|133881|gw1.76.50.1Tribonema minus UTEX_B_3156 polypeptideContig_76 76626..80417 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11330 ID=mRNA_11330|Name=jgi.p|Trimin1|133881|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=861bp|location=Sequence derived from alignment at Contig_76:76626..80417+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AAATGGAGACTTGGGCCGCGGATAGGAGCGGGATCTTTTGGCGTCGTGCA
CCAGGGCCTCGACCAGGTCACCGGCCAGCTCATCGCAGTAAGTTCACATT
TCAACGGGCAGCGCCAGGTGCTGCAGGAGGTGGCTATGATGAAACGTTTG
CGCCACCGCAACATTGTCTGCTACCTGGGTGCGGAGCTCCATGGATCCCA
GCTCTTCATTCATGAGCAGTTCATTGCTGGCGGCAGCCTTGAAGCAGTTC
TGCGGACATTCGGAGCTATCACAGTTTCCGTTGTGCGGCGCTACACGCTG
CAGATACTGGAAGGCATCAGCTACCTCCACTCCTGCGGTGTCGTGCATCG
CGACCTAAAGGCCGCAAACGTCCTCATCGACACGTGCGGCACCCCGCGGA
TCTCCGACTTCGGCACCAGCTGCATCAACTTGGACCAATCATCCACGTCC
ATGGCCGGCACGCCCCAGTTCATGGCACCAGAGGTGCTCCAGCGCCTCGA
CTGCGGCATGCCCGTGGACATCTGGGGCTTTGGCTGCACGTTAATACAGA
TGATTACCGGGCACTCGCCATGGCACGGCCTGAAGCTTCGCACGCTGCCG
GCACTCCTCGCGGCCCTGAACAGAGCTGAGGGGCGCATGCCGCCGCTGCC
ACCGGGCCTGGACCCCGCGTTGCACGTCCTGCTCGTCAGCTGCTTCCAGT
GGGAACCGGCGCAGCGCCCCACTTCTCAGCAGCTGCTGCTCAGCAACTTC
TTCTCCGACGCGCAGGCCGGCGCGTGCGGCGGGGGCAACGGCGACATCGA
GAGTCCCTGCGCCAGCAGGCAGCCAAGACCGCCGCCCGTGTCGCGCTGGT
TTGGCACACCT
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protein sequence of jgi.p|Trimin1|133881

>Trimin1|133881|gw1.76.50.1 ID=Trimin1|133881|gw1.76.50.1|Name=jgi.p|Trimin1|133881|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=287bp
KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSHFNGQRQVLQEVAMMKRL
RHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTL
QILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSSTS
MAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLP
ALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNF
FSDAQAGACGGGNGDIESPCASRQPRPPPVSRWFGTP
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mRNA from alignment at Contig_76:76626..80417+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11330 ID=mRNA_11330|Name=jgi.p|Trimin1|133881|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3792bp|location=Sequence derived from alignment at Contig_76:76626..80417+ (Tribonema minus UTEX_B_3156 )
AAATGGAGACTTGGGCCGCGGATAGGAGCGGGATCTTTTGGCGTCGTGCA CCAGGGCCTCGACCAGGTCACCGGCCAGCTCATCGCAGTAAGTTCACATT TCAACGTAGTCGTGCTTTTAACTTTGACGAGGCTTCGGTCCACCCCCTTG GTCTCTAACCATGTGTACCTGTATGCCAGAAAGGACGTGGTCGGAATCCG AGTACAGTGCAAGCGCTTGAGACCGACACCGCGAGGTTTGATGAGCTTGG GTCGCCATGCACCACGAGCTTTAGCAACCGCCATCACAGGCAGCTCAGCA ATTATGCTCGTGCTTTAGGTGATGTGGCTTGTGCCGAAGAGTGTACCGCG CTTGTCCAGGATGGTAGTTTTGCCTACATGCATCTCCTACGCTGGTTCGT TATTCTGGCAAAAGCTTGAGGTTAGCGATGGTAAGCATTAGCTTGCAGAA GCATGTGCTTGCGCGTAAGAGAGAAGCGAGAGCCTCACGCACTTCATGTA CCCTGACGGTTTTCCGTAGTACTTGACCATTGTTGAAGCTTGTTGACGCA AGTGCTGCTTGATGTCTCTGCGTCCACTCGATCTATGGTTATGAGACACC GCTTGCATCTGGAAGGTCAAACGCTCCTGGCTTTAGATGGTGAGGAGCAG GATGTAGGCCTACACGGACTTTGTTGCTTTCCATACGCTACTACTAGTAC ATGCACGTGCTTCGAAGGTATGTACTACACAGTTACTGTGTAGCAGTACA CCAAAGTGTCTGTCTATAGATGTATAATACGTATAAAAGCAATGAGCCTG GCCGTCAACGCAACCCATGCTAGACAAATGCTACAGTATTTGCATGCTTC TACTCCGCACACGAACAAATTGAAAAAACGTCAGCGCTCGTATTATTGTA CTACGATGGGCCACACTCAATGGTAGATGAAGCTTACATGCATGCGCACA TTGTGATTGAATCCTGCTTGTACTGCCCATAACGACTTTAACAATCAAGC AAGCACCATGGAGTTGTGCGCCTAACAATCGTGTTAATTAAAGTATGTAC AGGGTCGCGAGGGCAGCCGACATCGTGACTGTGCAAACATCGAAACCTGA GGGTTTATCGAGGCATACTCAGTGGTAAAACCTGACTGATTGTTGGCTTC AAGCCTTGCTTGCGCGAGGCTGCATGTGTGCCAGATTTCATGCAGAACGT TCGCAAGAACTGCATGTCCAATATGTACTGCCGCAGCTGCCAGCACTAAA GTCTGCAGGGGCGCAACCCCTGCGTCACACTCACAGCCAGTGCCGACTAT TGGAGAGAGACGCATCCACCACAAACACAACAACTCTTCATGTGTAGGTC CTCAGCAGGTGCTGTCTTCAGCAGGGAAAGCAGAAAACCTTGCATCTGAC AAAAGCCGTGCTGCCCGCGTTGAAACCGTTATGCCCAGGTGAAAGTGTGC TCCATGCCCAACAACGAGAAGGGGCAGCGCCAGGTGCTGCAGGAGGTGGC TATGATGAAACGTTTGCGCCACCGCAACATTGTCTGCTACCTGGGTGCGG AGCTCCATGGATCCCAGCTCTTCATTCATGAGCAGTTCATTGCTGGCGGC AGCCTTGAAGCAGTTCTGCGGACATTCGGAGCTATCACAGTTTCCGTTGT GCGGCGCTACACGCTGCAGATACTGGAAGGCATCAGCTACCTCCACTCCT GCGGTGTCGTGCATCGCGACCTAAAGGCCGCAAACGTAAGTGCTTGCGTT GAGTTTGGTGCTGCTCAAATGCTGAACCTGATCATCGACGCAGTAACTTC ATAACTACGCGTGTTACCGTAGAAATCCACAGGACTCTCAGACCCTGTGG AAAGTGATACATGCTCCAGAAATGTCACCTGCATATTGAAACGTAAGTCT AAGATGGTGTGGATATTACCATGACAATCTACAGTACTTTCAAACCCGTG AAAACTCATACCTCTCCGTCCCAGAACACAGCACGTTGACCCAATAACAG GTCACTAGTTGCGGGTTTGACTTGTACATGTCTGCTCTTTATATGAAAAC AATTGCTGACGGCGCAAGCTTTTTGGCACTATGCTAAAGCAAAATCATGT GACTTACTCTTCATCTTTGAAGTAGAGCGAACTTCAAGTTTCCAGATTCC AAAGTCAAACTGAGGCCGAAATTTCACAAAAAGTCAACTTGTCGTGGCGC CTGAACCATTGTCGGCGCCGCGGGCAGCACACGCCCCTGCAGGACAGTGC TTGCTCACAGCTGCTAATGATGACGTTATTTCCACGTTTGCTGAGTGCAC CACCTGGCCTGGTGGTGCCTAGGGGTGGCAAGCCGAATTTATGCCTGGAG GTCACCACCTAGCATGCGCCAGGCACTCGTCATCCCTTCCAGCAGCAGCA AAGATGACGTGCCGTGGCAGGCGAACCTCCTGGTGTGCTGTGTACGTTGT GCTGCAAGTGTGCTGGGGAGTGCAGCAGCACCCATTGCAATTCCGCAAAG GGGCTGGGTGCACCTCATGTACCGTGAGCCTAGGCGAGATGTCCACCGAT CCTGGCGTTCTATTGCCACTACTTCCGCTATAGCAGCAACCCATACACCA GCTTGTCCGTACAAGGTGCCTTGTAGGCCTTGCTTAGTGTCTGAGGTGGC ACGTCATATACGTCTGGGTGGAGCACGGTGTTGACCAACACCTTGTCGAT GTGGTTGGAAGCTCAAGCTTGCTTGAGTCGCCCGACTACTTTTACATATG GTATGATTGCATTGCTGCCCATGCGATGTGCGTGTAAGGCTTGCTGTGCT GGTCGGCACTTCGTAGTGCGAAAATGAGGCTAGACCAGCACAGTATGCAC CGCGGCCTCGAGCAGCATATGCCGTGCCTGCTCAGTCATATGATGTAGCG AGATGTTTGCTGCAGCTTGCCTTACCTGCCCATGACGACATACTGGTAGG CCACATGCATGCAAGTTGATGTACCCTCCTAAAGTGGCAGCCAGCCAGCA GCGTATGTTGCTGCCGTGTGGTGTATGAATGCCTGTTTGGCTGAAAATGT CGCGCACAAGTTAACAAGCTGTTGACCTGTGTATCAAGGACTTGTGAGCC GAGAATTTGACTTGCAAAAGAGCTACTGCATCTGATGAACAAGTTTTGTT ATTAGTTTTTACTCTTCTTGTTGATGGTATATGTACTGGGTCAGTCTGTA GAACGGTCAACATACTTATGGGACCGGAAAAGTACATATTCCAAGAATTT TAAATGCACATCGGAAAGCTCAAACATGCCTTCGTGCGATCTTGTATCAG GTCCTCATCGACACGTGCGGCACCCCGCGGATCTCCGACTTCGGCACCAG CTGCATCAACTTGGACCAATCATCCACGTCCATGGCCGGCACGCCCCAGT TCATGGCACCAGAGGTGCTCCAGCGCCTCGACTGCGGCATGCCCGTGGAC ATCTGGGGCTTTGGCTGCACGTTAATACAGATGATTACCGGGCACTCGCC ATGGCACGGCCTGAAGCTTCGCACGCTGCCGGCACTCCTCGCGGCCCTGA ACAGAGCTGAGGGGCGCATGCCGCCGCTGCCACCGGGCCTGGACCCCGCG TTGCACGTCCTGCTCGTCAGCTGCTTCCAGTGGGAACCGGCGCAGCGCCC CACTTCTCAGCAGCTGCTGCTCAGCAACTTCTTCTCCGACGCGCAGGCCG GCGCGTGCGGCGGGGGCAACGGCGACATCGAGAGTCCCTGCGCCAGCAGG CAGCCAAGACCGCCGCCCGTGTCGCGCTGGTTTGGCACACCT
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Coding sequence (CDS) from alignment at Contig_76:76626..80417+

>mRNA_11330 ID=mRNA_11330|Name=jgi.p|Trimin1|133881|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=861bp|location=Sequence derived from alignment at Contig_76:76626..80417+ (Tribonema minus UTEX_B_3156 )
AAATGGAGACTTGGGCCGCGGATAGGAGCGGGATCTTTTGGCGTCGTGCA
CCAGGGCCTCGACCAGGTCACCGGCCAGCTCATCGCAGTAAGTTCACATT
TCAACGGGCAGCGCCAGGTGCTGCAGGAGGTGGCTATGATGAAACGTTTG
CGCCACCGCAACATTGTCTGCTACCTGGGTGCGGAGCTCCATGGATCCCA
GCTCTTCATTCATGAGCAGTTCATTGCTGGCGGCAGCCTTGAAGCAGTTC
TGCGGACATTCGGAGCTATCACAGTTTCCGTTGTGCGGCGCTACACGCTG
CAGATACTGGAAGGCATCAGCTACCTCCACTCCTGCGGTGTCGTGCATCG
CGACCTAAAGGCCGCAAACGTCCTCATCGACACGTGCGGCACCCCGCGGA
TCTCCGACTTCGGCACCAGCTGCATCAACTTGGACCAATCATCCACGTCC
ATGGCCGGCACGCCCCAGTTCATGGCACCAGAGGTGCTCCAGCGCCTCGA
CTGCGGCATGCCCGTGGACATCTGGGGCTTTGGCTGCACGTTAATACAGA
TGATTACCGGGCACTCGCCATGGCACGGCCTGAAGCTTCGCACGCTGCCG
GCACTCCTCGCGGCCCTGAACAGAGCTGAGGGGCGCATGCCGCCGCTGCC
ACCGGGCCTGGACCCCGCGTTGCACGTCCTGCTCGTCAGCTGCTTCCAGT
GGGAACCGGCGCAGCGCCCCACTTCTCAGCAGCTGCTGCTCAGCAACTTC
TTCTCCGACGCGCAGGCCGGCGCGTGCGGCGGGGGCAACGGCGACATCGA
GAGTCCCTGCGCCAGCAGGCAGCCAAGACCGCCGCCCGTGTCGCGCTGGT
TTGGCACACCT
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