mRNA_11330 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YTJ7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ7_9STRA) HSP 1 Score: 586 bits (1511), Expect = 8.000e-212 Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 1 Query: 1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQAGACGGGNGDIESPCASRQPRPPPVSRWFGTP 861 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQAGACGGGNGDIESPCASRQPRPPPVSRWFGTP Sbjct: 1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQAGACGGGNGDIESPCASRQPRPPPVSRWFGTP 287
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A836CHV3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHV3_9STRA) HSP 1 Score: 253 bits (647), Expect = 1.220e-80 Identity = 135/268 (50.37%), Postives = 176/268 (65.67%), Query Frame = 1 Query: 1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSS------HFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAA------NVLIDTCGTPRISDFGTS--CINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEG-RMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSD 759 KW+LGP I G+FG VH GL+Q+TG+LIAV + + N Q+ EV +M+R RH NIV YLGAELHGS + I ++++ GGS+ ++L+ FG T V R Y QIL+GI YLHSCG+VH DLK NVL+ T G +I+DFGTS +L T + GTP FMAPEVLQR GM VD+W F C ++QM+TG +PW L L T +LA L + R PPLPP + P++ LLV CF W+PA RPT++ LL S++FSD Sbjct: 5 KWKLGPCIVRGAFGQVHMGLNQMTGELIAVKACLTSFGNHNTANQLTNEVLLMQRCRHPNIVGYLGAELHGSWVCILQEWVPGGSICSILQNFGPFTERVTRCYAHQILQGIMYLHSCGIVHHDLKGEKQIAGDNVLVSTSGVVKIADFGTSEQVFDLQDRHTKLMGTPYFMAPEVLQRQRHGMAVDVWAFACVILQMLTGDAPWRSL-LGTNKVVLALLQTMQTHRTPPLPPDISPSMRALLVECFSWDPAGRPTAKDLLQSSYFSD 271
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YKW2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW2_9STRA) HSP 1 Score: 255 bits (651), Expect = 1.020e-79 Identity = 134/277 (48.38%), Postives = 183/277 (66.06%), Query Frame = 1 Query: 4 WRLGPRIGAGSFGVVHQGLDQVTGQLIAVS----------------SHFNGQRQVL-QEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSSTS-MAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQAGACG 780 W LGP IG GSFG VH GL+Q+TG+L+A+ +H ++ L +EV +M +L+HRN V YLGAE +++I +Q+I GGS+ A+L FG ++ V R Y Q L G++YLH+ G+VHRDLK N+LID GT +I+DFGTS D ++ + M GTP FMAPE+L R D G+PVDIWGF CT++QM+T PWH ++ +LPALL+ + A RMPPLPP + P + +LV+CF+W+PA+RPTS+QLL S D QA G Sbjct: 2 WCLGPTIGRGSFGEVHMGLNQITGELMAIKVCALPLCVAHSLRQPGAHACAKQHSLPREVFIMSQLQHRNTVRYLGAESDDDKVYIFQQWIPGGSISALLARFGPLSEHVTRLYARQALRGLAYLHANGIVHRDLKGDNLLIDGEGTIKIADFGTSARVPDGAAAAEMLGTPYFMAPEMLLRCDHGLPVDIWGFACTVLQMLTNRRPWHSCRVTSLPALLSVMQAALQRMPPLPPDMSPVMRAVLVNCFRWDPAERPTSRQLLRS--LRDCQAPGIG 276
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835Z180_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z180_9STRA) HSP 1 Score: 234 bits (598), Expect = 2.570e-73 Identity = 126/261 (48.28%), Postives = 166/261 (63.60%), Query Frame = 1 Query: 4 WRLGPRIGAGSFGVVHQGLDQVTGQLIAV-------SSHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTS--CINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEG-RMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFS 756 W LG +IG G+FG VH G +QVTG+LIAV Q++ E+ +M+R H NIV YLGAELH S + I ++++AGGS+ ++L +FGA V Y Q+L+G+ YLHSCG+VHRDLK NVLI G +I+DFGTS +L +S + GTP FMAPEVLQR GM VDIW F C ++QM+TG PW L L T + L + R+PPLPP LD +L + LV+CF W+ RPT++ LL S +FS Sbjct: 6 WVLGSQIGRGAFGQVHMGHNQVTGELIAVRRLCLVSDEKRAATSQLINEIQLMQRCHHPNIVGYLGAELHTSWVCILQEWVAGGSITSMLASFGAFPQPVTHCYARQLLQGVMYLHSCGIVHRDLKGDNVLISASGVVKIADFGTSKQLFDLQDNSAQLQGTPYFMAPEVLQRQPHGMAVDIWAFACVVLQMLTGDMPW-SLALGTQKTVTQLLQIMQSERIPPLPPDLDLSLRMALVACFSWDSVGRPTAKSLLHSGYFS 265
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.320e-69 Identity = 121/263 (46.01%), Postives = 173/263 (65.78%), Query Frame = 1 Query: 1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAV---SSHFNGQ--RQVLQEVAMMKRLRHRNIVCYLGAELH--GSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTS-CIN--LDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSD 759 KW+LG RI GSFGVV+ GL++VTG+L+AV S H + + R++ +E+A+M++ H NIV YLGAE+ QL I ++++ GGS+ ++LR FG + + RRYT Q L G++YLH VVHRD+K +N+L+D GT +++DFG S C++ D ++ GTP FMAPEVLQR G VDIW FG ++QM+TG PW+ + T ALL + +G+ PPLP L P+L +L CF W+PA RP++ QL L F + Sbjct: 90 KWKLGNRIARGSFGVVYMGLNEVTGELMAVKVLSLHGSERDMRELHREMALMRQFSHPNIVSYLGAEIREEDGQLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGSNILVDDRGTVKLADFGASICVSDPADAGGGALKGTPYFMAPEVLQRKPHGPLVDIWSFGGAILQMVTGEPPWYSAGVSTPYALLQTMLERKGQPPPLPANLSPSLAAMLRRCFSWDPALRPSAAQLELDAFLQE 352
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YJU3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU3_9STRA) HSP 1 Score: 223 bits (567), Expect = 1.020e-68 Identity = 122/257 (47.47%), Postives = 162/257 (63.04%), Query Frame = 1 Query: 1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSHF-NGQR-----QVLQEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTS--CINLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWH---GLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLL 738 KW LGP +G G+FG VH GLDQVTG+ IAV + +G R ++ E+ +M+R RH NIV YLG EL + ++I ++++ GGS+ ++L FGA T V + Y QIL G+ YLHSCG VHRDLK NVL+ G +I+DFGTS +L + GT FMAPEVLQR GM VD+W F C ++QM TG+ PW G + R LP LL + RMPPLP L+P + L +CF W PA+RPT++ L+ Sbjct: 2 KWALGPELGRGAFGQVHMGLDQVTGEFIAVKACLISGGRSSTASKLSNEIRLMQRCRHVNIVQYLGTELSPAGVYIVQEWVPGGSITSILSNFGAFTQPVTQCYARQILHGLVYLHSCGTVHRDLKGDNVLVSAGGIVKIADFGTSEQLYDLQDDRGHLQGTLHFMAPEVLQRQPQGMAVDVWAFACLVLQMHTGNMPWASELGARKR-LPRLLRLMQ--AHRMPPLPNDLNPTMRAALTACFSWNPAERPTAKHLV 255
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA) HSP 1 Score: 219 bits (557), Expect = 4.640e-67 Identity = 117/265 (44.15%), Postives = 165/265 (62.26%), Query Frame = 1 Query: 1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVS-----SHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGS--QLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSSTSMA-----GTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSD 759 KW+LG RI GSFGVV+ GL++ TG L+AV ++ +E+A+M+ H NIV YLGAE+ QL I ++++ GGS+ ++L+ FG + + R YT Q L+G++YLHS VVHRD+ +N+L+D G +++DFG S + L ++ S A GTP FMAPEVLQR GMPVD+W FG ++QM++G PW + T ALL AL G+ PPLP L L L CF+W+PA+RPT+ +L L F S+ Sbjct: 6 KWKLGNRIARGSFGVVYMGLNEATGALMAVKVLSLRGSDRDLHELHREMALMRAFSHPNIVSYLGAEIREEHDQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGSNILVDDHGVVKLADFGAS-LQLSDAAGSRADGALKGTPYFMAPEVLQRSAHGMPVDVWSFGGAVLQMVSGEPPWFSYGVSTPYALLQALLERRGQTPPLPADLSAGLRAFLERCFRWDPAERPTAAELALDPFLSE 269
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A2R5G4S8_9STRA (Mitogen-activated protein kinase kinase kinase NPK1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4S8_9STRA) HSP 1 Score: 200 bits (509), Expect = 8.860e-57 Identity = 111/268 (41.42%), Postives = 162/268 (60.45%), Query Frame = 1 Query: 1 KWRLGPRIGAGSFGVVHQGLDQVTGQLIAV----SSHFNGQRQVLQEVAMMKRLRHRNIVCYLGAELHGSQ--LFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQS------STSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQA 768 +W+ G IGAGS+G V GL++++G L+AV +S R + QEV +M+ LRH NIV YLG+E + I +++ GGS+ +L+ FG +T SVVR+YT QIL+G++YLH GV+HRD+K AN+L+D G +++DFG S + + + S+ GTP FMAPEV+ + G DIW GCT +QM++G PW ++ +L AL+ + PP+P + AL L+ CFQ PA+RPT+ LL F S A Sbjct: 2 RWKKGELIGAGSYGKVFVGLNELSGSLMAVKEVRASSEAEVRALQQEVGLMRSLRHENIVQYLGSEADAKLRIVSIFTEWVPGGSIAGLLQKFGGLTESVVRKYTRQILQGLAYLHRKGVIHRDIKGANILVDDRGCIKLADFGASKVLSGAAGGSILENHSLRGTPYFMAPEVITQTGHGRKADIWSVGCTTLQMVSGKPPWKSMQFGSLQALMYHICNTN-EAPPMPHDISSALRSFLMICFQRLPAERPTANSLLQHPFLSHVPA 268
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: F0YL51_AURAN (Protein kinase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL51_AURAN) HSP 1 Score: 191 bits (484), Expect = 1.290e-54 Identity = 120/305 (39.34%), Postives = 172/305 (56.39%), Query Frame = 1 Query: 4 WRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSH-FNGQRQVLQEVAMMKR-------LRHRNIVCYLGAELHGSQ--LFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCINLDQSST------SMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPALLAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFFSDAQAGA---CGGGNGDIESPCASRQPRPPPVSRWFGTP 861 WR G IG G+ G V+ GL++ TG +IAV F +Q L+E+A M+ L H NIV YLG ++ L+I +++ GGS++A++ FG ++ ++VR+Y Q+L G+ YLH V+HRD+KAAN+L+D GT +++DFG+S +D T S+ GTP FMAPEV+ + G DIW GCT++QM+TG PW L+L T AL+ + A+ PP+P L L LL++ F + RPT+ QLL F A A G G +E RQ PP V + TP Sbjct: 59 WRKGDLIGTGANGRVYLGLEEDTGAIIAVKEILFTNNQQDLEELAQMQEEIELLRSLHHPNIVTYLGTDVSDDDQTLYIFTEWVPGGSIQALVTKFGKLSEAIVRKYVAQLLVGLDYLHEQQVIHRDIKAANILVDDRGTIKLADFGSSK-RMDSMGTMGNENHSLRGTPYFMAPEVIMQTGHGRKADIWSVGCTILQMVTGQPPWKSLQLGTPAALMFHIANAQAP-PPMPSALSDHLRNLLLATFSRDMNNRPTANQLLEYPFVVANGASAEAIAAGAQGLLE-----RQNAPPEVPQRESTP 356
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Match: A0A835YJH2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH2_9STRA) HSP 1 Score: 187 bits (475), Expect = 3.920e-54 Identity = 108/266 (40.60%), Postives = 153/266 (57.52%), Query Frame = 1 Query: 4 WRLGPRIGAGSFGVVHQGLDQVTGQLIAVS---------SHFNGQRQVL---QEVAMMKRLRHRNIVCYLGAELHGSQLFIHEQFIAGGSLEAVLRTFGAITVSVVRRYTLQILEGISYLHSCGVVHRDLKAANVLIDTCGTPRISDFGTSCI--NLDQSSTSMAGTPQFMAPEVLQRLDCGMPVDIWGFGCTLIQMITGHSPWHGLKLRTLPAL--LAALNRAEGRMPPLPPGLDPALHVLLVSCFQWEPAQRPTSQQLLLSNFF 753 W LG IG G+ G VH G+ + TG+LIAV S +G +EV MM+ LRH N+V +LG+ G++LFI ++++ GGSL A+L +FG + VVR Y Q+L G++YLH+ + HRDLK AN+L+D G +I+DFGTS + + + GTP +MAPE+L + G+PVDIW FG +++M T +PW +P++ L L E P LP LD AL +L+ CF W RPT LL +F Sbjct: 54 WSLGKVIGRGATGTVHMGMIKDTGRLIAVKVIEMHHHARSGASGSEHAXXXXREVQMMRLLRHPNLVAFLGSTSRGNELFILQEWVPGGSLLALLSSFGRLNTKVVRHYARQVLHGLAYLHANTIAHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGNHGQLIGTPIYMAPELLFQGKHGLPVDIWAFGAAVLEMATALAPWRIQGPEGMPSIDYLRCLVAKE-HAPALPLDLDAALRSMLMQCFCWRSGDRPTCSALLAHDFL 318 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|133881 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11330 ID=mRNA_11330|Name=jgi.p|Trimin1|133881|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=861bp|location=Sequence derived from alignment at Contig_76:76626..80417+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AAATGGAGACTTGGGCCGCGGATAGGAGCGGGATCTTTTGGCGTCGTGCAback to top protein sequence of jgi.p|Trimin1|133881 >Trimin1|133881|gw1.76.50.1 ID=Trimin1|133881|gw1.76.50.1|Name=jgi.p|Trimin1|133881|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=287bp KWRLGPRIGAGSFGVVHQGLDQVTGQLIAVSSHFNGQRQVLQEVAMMKRLback to top mRNA from alignment at Contig_76:76626..80417+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11330 ID=mRNA_11330|Name=jgi.p|Trimin1|133881|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3792bp|location=Sequence derived from alignment at Contig_76:76626..80417+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_76:76626..80417+ >mRNA_11330 ID=mRNA_11330|Name=jgi.p|Trimin1|133881|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=861bp|location=Sequence derived from alignment at Contig_76:76626..80417+ (Tribonema minus UTEX_B_3156 )back to top |