mRNA_11285 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|352358
Unique Name	mRNA_11285
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|352358 vs. uniprot
Match: A0A835ZEE6_9STRA (Histidine phosphatase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEE6_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 4.130e-141
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 1

Query:    1 MAVLFKLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSYTFDCVWSSDLSRASDTAAAIMSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVTLDPLLREVNLGVLETLPRGTGRQRALAIKAERAGVPLAQYAPPPSETMGDLTRRAASFCALLIDAARAQRSAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVYLAVSHGGFMHALLTSIMGVEGVRSLGNCCVCEVDVLEEQRPGATAEGNSGGXXXXXXXXXXXXXXXXAVLYAPRRINDTRHLDAAGLQSSMVVENLL 1056
            MAVLFKLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSYTFDCVWSSDLSRASDTAAAIMSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVTLDPLLREVNLGVLETLPRGTGRQRALAIKAERAGVPLAQYAPPPSETMGDLTRRAASFCALLIDAARAQRSAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVYLAVSHGGFMHALLTSIMGVEGVRSLGNCCVCEVDVLEEQRPGATAEGNSGGXXXXXXXXXXXXXXXXAVLYAPRRINDTRHLDAAGLQSSMVVENLL
Sbjct:    1 MAVLFKLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSYTFDCVWSSDLSRASDTAAAIMSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVTLDPLLREVNLGVLETLPRGTGRQRALAIKAERAGVPLAQYAPPPSETMGDLTRRAASFCALLIDAARAQRSAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVYLAVSHGGFMHALLTSIMGVEGVRSLGNCCVCEVDVLEEQRPGATAEGNSGGXXXXXXXXXXXXXXXXAVLYAPRRINDTRHLDAAGLQSSMVVENLL 352

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BLAST of jgi.p|Trimin1|352358 vs. uniprot
Match: A0A661ATY8_9BACT (Histidine phosphatase family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A661ATY8_9BACT)

HSP 1 Score: 76.3 bits (186), Expect = 1.590e-12
Identity = 30/67 (44.78%), Postives = 51/67 (76.12%), Query Frame = 1

Query:   19 LVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSYTFDCVWSSDLSRASDTAAAIMSR 219
            ++L+RHGET ANRDG+ +G+ D+PL+  G+ QAQ +A+H+A+ ++ D ++S  LSR ++TAA +  +
Sbjct:    8 IILIRHGETMANRDGIFRGRKDFPLNKNGILQAQQLAEHIAKKFSLDAIYSGPLSRTTETAAPVAEK 74

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BLAST of jgi.p|Trimin1|352358 vs. uniprot
Match: A0A137QYG1_9AGAR (Uncharacterized protein n=1 Tax=Leucoagaricus sp. SymC.cos TaxID=1714833 RepID=A0A137QYG1_9AGAR)

HSP 1 Score: 75.5 bits (184), Expect = 3.070e-12
Identity = 43/71 (60.56%), Postives = 52/71 (73.24%), Query Frame = 1

Query:    1 MAVLFKLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSYTFDCVWSSDLSRASDTAAAIM 213
            MAVL K+ LVRHGET ANR+ ++QGQ D PL+  GL Q++ VA  L +  TFD V SSDLSRAS TA AI+
Sbjct:    1 MAVLAKIYLVRHGETDANRERIIQGQLDTPLNGIGLDQSKSVARAL-KDITFDLVLSSDLSRASATATAIL 70

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BLAST of jgi.p|Trimin1|352358 vs. uniprot
Match: D8LF56_ECTSI (Phosphoglycerate mutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF56_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 4.830e-12
Identity = 67/203 (33.00%), Postives = 84/203 (41.38%), Query Frame = 1

Query:    7 VLFKLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSYTFDCVWSSDLSRASDTAAAIMSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVTLDPLLREVNLGVLETLPRGTGRQRALAIKAERAGVPLAQYAPPPSETMGDLTRRAASFCALLI-DAARA 612
            +L  L  VRHGETTANR+G++QG  DY L+  G+ QA   A  L +  T+   +SSDL+RAS TA  I+                                                               +   PLLRE  LG  E LPRGT   RA  +KAE AGV    Y     E+  D+ +RA  F A L+ DA RA
Sbjct:    4 LLCTLHFVRHGETTANREGIIQGHQDYDLTPIGINQAVATAIRL-RGNTYWQTYSSDLTRASHTAEIILEEHAGA--------------------------------------------------------NLRKTPLLREFALGAQEGLPRGTTWPRARRMKAEAAGVSPVAYNESLRESPADVHKRAQQFLASLVSDAVRA 149

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BLAST of jgi.p|Trimin1|352358 vs. uniprot
Match: UPI000D73FE53 (uncharacterized protein LOC112565631 isoform X3 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D73FE53)

HSP 1 Score: 76.3 bits (186), Expect = 1.290e-11
Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 1

Query:    7 VLFKLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSYTFDCVWSSDLSRASDTAAAIM 213
            V+F L LVRHGETTAN+DG++QG  D PLS+ G+ QA +VA  L Q+  F  +++SDL RA++TA AI+
Sbjct:    2 VVFSLTLVRHGETTANKDGIIQGHRDVPLSEVGMEQANLVAKRL-QNEHFTHIFASDLKRAAETAQAIV 69

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BLAST of jgi.p|Trimin1|352358 vs. uniprot
Match: A0A2A9NZQ3_9AGAR (Uncharacterized protein n=1 Tax=Amanita thiersii Skay4041 TaxID=703135 RepID=A0A2A9NZQ3_9AGAR)

HSP 1 Score: 73.6 bits (179), Expect = 1.520e-11
Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 1

Query:   16 KLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSYTFDCVWSSDLSRASDTAAAIMS 216
            ++ LVRHGET ANR+ ++QGQ D PL+DTGL QA++VA  L QS  FD  ++SDL RA  TA  I+S
Sbjct:    5 RIFLVRHGETDANREKIMQGQLDTPLNDTGLQQARLVAQRL-QSVQFDIAYTSDLQRAVKTAETIVS 70

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BLAST of jgi.p|Trimin1|352358 vs. uniprot
Match: UPI0006B0A93E (fructose-2,6-bisphosphatase TIGAR-like isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0A93E)

HSP 1 Score: 75.9 bits (185), Expect = 1.890e-11
Identity = 43/72 (59.72%), Postives = 52/72 (72.22%), Query Frame = 1

Query:    7 VLFKLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLA-QSYTFDCVWSSDLSRASDTAAAIMSR 219
            V+F L LVRHGET  N+D V+QGQ D PLS+TGL QA+ +A HL  Q YT   V++SDLSRA+ TA  IM R
Sbjct:    2 VIFALTLVRHGETGHNKDNVIQGQLDVPLSETGLQQAEHLARHLQHQKYTH--VFTSDLSRAAQTADIIMKR 71

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BLAST of jgi.p|Trimin1|352358 vs. uniprot
Match: A0A5C3MCI9_9AGAR (Phosphoglycerate mutase-like protein n=1 Tax=Crucibulum laeve TaxID=68775 RepID=A0A5C3MCI9_9AGAR)

HSP 1 Score: 73.2 bits (178), Expect = 2.140e-11
Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 1

Query:    1 MAVLFKLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSYTFDCVWSSDLSRASDTAAAIMS 216
            MAV+ K+ L+RHGET ANR+ ++QGQ D PL++ G  QA++V + L +   FD  +SSDLSRA+ TA AI++
Sbjct:    1 MAVIAKIYLIRHGETDANRNNIIQGQLDTPLNEAGEKQARLVGEALRE-VPFDLAFSSDLSRAAKTADAILA 71

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BLAST of jgi.p|Trimin1|352358 vs. uniprot
Match: A0A6H5JJ63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ63_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 2.800e-11
Identity = 65/203 (32.02%), Postives = 83/203 (40.89%), Query Frame = 1

Query:    7 VLFKLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSYTFDCVWSSDLSRASDTAAAIMSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRVTLDPLLREVNLGVLETLPRGTGRQRALAIKAERAGVPLAQYAPPPSETMGDLTRRAASFCALLI-DAARA 612
            +L  +  VRHGETTANR+G++QG  DY L+  G+ QA   A  L +  T+   +SSDL+RAS TA  I+                                                               +   PLLRE  LG  E LPRGT   RA  +KAE AGV    Y     E+  D+ +RA  F   L+ DA RA
Sbjct:   18 LLCTIHFVRHGETTANREGIIQGHQDYDLTPIGINQAVATAIRL-RGNTYWRTYSSDLTRASHTAEIILEEHPGA--------------------------------------------------------NLRKTPLLREFALGAQEGLPRGTTWPRARRMKAEAAGVSPVAYKESLRESPADVHKRAQQFLTSLVSDAVRA 163

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BLAST of jgi.p|Trimin1|352358 vs. uniprot
Match: L7MBN7_RHIPC (Putative tp53-induced glycolysis and apoptosis regulator b (Fragment) n=5 Tax=Rhipicephalinae TaxID=426437 RepID=L7MBN7_RHIPC)

HSP 1 Score: 74.7 bits (182), Expect = 4.050e-11
Identity = 39/71 (54.93%), Postives = 49/71 (69.01%), Query Frame = 1

Query:    7 VLFKLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSYTFDCVWSSDLSRASDTAAAIMSR 219
            V+F L LVRHGET  N+D V+QGQ D PLS  GL QA+++  HL Q   F  V+SSDLSRA  TA +I+ +
Sbjct:   69 VMFALTLVRHGETLHNKDNVIQGQLDVPLSTIGLEQAELLGKHLQQQ-RFTHVYSSDLSRAKQTAQSILEK 138

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|352358 vs. uniprot

BLAST of jgi.p|Trimin1|352358 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZEE6_9STRA	4.130e-141	100.00	Histidine phosphatase superfamily n=1 Tax=Tribonem...	[more]
A0A661ATY8_9BACT	1.590e-12	44.78	Histidine phosphatase family protein n=1 Tax=bacte...	[more]
A0A137QYG1_9AGAR	3.070e-12	60.56	Uncharacterized protein n=1 Tax=Leucoagaricus sp. ...	[more]
D8LF56_ECTSI	4.830e-12	33.00	Phosphoglycerate mutase n=1 Tax=Ectocarpus silicul...	[more]
UPI000D73FE53	1.290e-11	55.07	uncharacterized protein LOC112565631 isoform X3 n=...	[more]
A0A2A9NZQ3_9AGAR	1.520e-11	56.72	Uncharacterized protein n=1 Tax=Amanita thiersii S...	[more]
UPI0006B0A93E	1.890e-11	59.72	fructose-2,6-bisphosphatase TIGAR-like isoform X1 ...	[more]
A0A5C3MCI9_9AGAR	2.140e-11	51.39	Phosphoglycerate mutase-like protein n=1 Tax=Cruci...	[more]
A0A6H5JJ63_9PHAE	2.800e-11	32.02	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
L7MBN7_RHIPC	4.050e-11	54.93	Putative tp53-induced glycolysis and apoptosis reg...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_116	contig	Contig_116:241008..243160 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|352358\|estExt_Genemark1.C_Ctg_1160043
Description	regulation of pentose-phosphate shunt
COG category	G
Max annot lvl	2880.D8LF56\|-
EggNOG OGs	COG0588@1\|root,KOG0235@2759\|Eukaryota
Evalue	8.05e-16
Seed ortholog	2880.D8LF56
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Phosphoglycerate mutase
Ec32 ortholog	Ec-06_001760.1
TranscriptId	352680
Track	FilteredModels1
ProteinId	352358

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352358	gene_11285	Tribonema minus UTEX_B_3156	gene	Contig_116 241008..243160 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_11285_1	exon_11285_1	Tribonema minus UTEX_B_3156	exon	Contig_116 241008..241079 +
exon_11285_2	exon_11285_2	Tribonema minus UTEX_B_3156	exon	Contig_116 242161..243160 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_11285	CDS_11285	Tribonema minus UTEX_B_3156	CDS	Contig_116 241008..241079 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_11285	UTR3_11285	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_116 243148..243160 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|352358	Trimin1\|352358\|estExt_Genemark1.C_Ctg_1160043	Tribonema minus UTEX_B_3156	polypeptide	Contig_116 241008..243147 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_116:241008..243160+
coding sequence from alignment at Contig_116:241008..243160+

spliced messenger RNA

>mRNA_11285 ID=mRNA_11285|Name=jgi.p|Trimin1|352358|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1072bp|location=Sequence derived from alignment at Contig_116:241008..243160+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGGTGCTGTTCAAGCTTGTGCTGGTGAGACATGGCGAAACCACGGC
CAACAGGGATGGAGTGCTTCAGGGCCAGACCGACTACCCCCTATCCGACA
CCGGCCTGGCGCAAGCACAAATTGTCGCTGACCACCTGGCACAGTCCTAT
ACCTTTGATTGCGTCTGGTCATCGGACCTGAGCCGCGCAAGCGACACGGC
GGCAGCGATCATGAGCCGGCAGCGCGCACCGCCGCCGCCGCCGCCGCAGC
AGCAGCAGCAGCAGCAACAGTCTGCGGCACCACAGCAGCAGTCAACGCCT
TCGCTGCCGCCGTCACAGGCTGACTCGCAGCAGCAGCTGCAGCCGTCATC
GTCACCGCCCCCGCAGCCATCGCCGCCGCCGCCGCAGCAGCAGCCGCCGC
GCGTGACGCTCGACCCGCTGCTGCGCGAGGTGAACCTCGGCGTGCTGGAG
ACGCTGCCGCGCGGCACCGGGCGGCAGCGCGCGCTCGCCATCAAGGCGGA
GCGCGCCGGCGTGCCGCTCGCGCAGTACGCGCCGCCGCCGAGCGAGACCA
TGGGCGACCTCACGCGCCGCGCGGCGTCGTTCTGCGCGCTGCTAATCGAC
GCCGCGCGTGCACAGCGCAGCGCAGGTGCCGCCGCGGCGCCGGCGACAGC
GCCGCCGTCGCCGTCGGCGCACGAGGACGGAGCGCCCGACGCCGCGGCGG
CGGCGACTGCGGCGGCGGCGACTGCGGTGGCGAGTGCGGCAGCGGCGGCG
GCGGCGCCGGTGTACCTGGCGGTCTCGCACGGCGGCTTCATGCACGCGCT
GCTGACGAGCATCATGGGCGTGGAGGGCGTGCGCAGCCTCGGCAACTGCT
GCGTGTGCGAGGTGGACGTGCTAGAGGAGCAGCGCCCAGGCGCGACGGCT
GAGGGCAACAGCGGCGGCGGCGAACTGTGTGGCGGCGGCGGCGGCGGCAA
GCGCGGCGGCGGCGGCGCCGTCTTGTACGCGCCGCGGCGCATCAACGACA
CGCGGCACCTGGACGCGGCGGGCCTGCAGAGCTCCATGGTTGTGGAGAAC
CTGCTATGAACATTCGTCGCCG

protein sequence of jgi.p|Trimin1|352358

>Trimin1|352358|estExt_Genemark1.C_Ctg_1160043 ID=Trimin1|352358|estExt_Genemark1.C_Ctg_1160043|Name=jgi.p|Trimin1|352358|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=353bp
MAVLFKLVLVRHGETTANRDGVLQGQTDYPLSDTGLAQAQIVADHLAQSY
TFDCVWSSDLSRASDTAAAIMSRQRAPPPPPPQQQQQQQQSAAPQQQSTP
SLPPSQADSQQQLQPSSSPPPQPSPPPPQQQPPRVTLDPLLREVNLGVLE
TLPRGTGRQRALAIKAERAGVPLAQYAPPPSETMGDLTRRAASFCALLID
AARAQRSAGAAAAPATAPPSPSAHEDGAPDAAAAATAAAATAVASAAAAA
AAPVYLAVSHGGFMHALLTSIMGVEGVRSLGNCCVCEVDVLEEQRPGATA
EGNSGGGELCGGGGGGKRGGGGAVLYAPRRINDTRHLDAAGLQSSMVVEN
LL*

mRNA from alignment at Contig_116:241008..243160+

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_11285 ID=mRNA_11285|Name=jgi.p|Trimin1|352358|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2153bp|location=Sequence derived from alignment at Contig_116:241008..243160+ (Tribonema minus UTEX_B_3156 )
ATGGCGGTGCTGTTCAAGCTTGTGCTGGTGAGACATGGCGAAACCACGGC
CAACAGGGATGGAGTGCTTCAGGTGACCTACCCTCCCTCTTTGCATTCGA
TGCTCAGAACTTCAGTACATGATGTGCTAGCTGACGACTCGCACGTCAGG
GACCGTAGGCTTATGCATATGCTTACAGCAGCCGACAGCGTTGTCGCAAC
ATTGAAGCTCGCAAGTCCTGCTCGTATGTACATCGCCTTCTTGGCGAGCC
ACTCCACACCGATGAGTGCCATTTACCAGATCTTAAACGCTCTGACAGAC
GTAGAATGCCATCTGATTTTGTATAGAGATGCAAGGATTGCGTTTACTGC
CATAGAGCTTGGCACATAGCCTTAACCTGCCAGGCTTAGGGTTAGAAGTA
GGGTTTGTGTGTGTTCACAGTATACCCACATTGCGAGCAGCTGTCGGTGC
TGCGGTGCTAACATCACACAATCATCTGAGTCAGATCCCCCCACAACCAG
GGTGCATAGCACGCCAATTGCAGCATCATCAGCGCGTCCACAGAGCTCTC
TCAGCCACAGTATCGTGCATCATCTGCACATCTGCCAATGTCAGTCGCAG
CCGCTCCAGGCGCTGCTGCATTAGTGAATGATGCTGGAGGCTTGCGGGTG
CTCAAACACAATGAATATCATTCCTGTTCACAAAGCAGTCGTATATCCAA
TCTAGGCCACTCGCGGCAAAACGGTTCACTTTGCGGACGGAATCTCTCCC
TTTGCTTGCAGCCCAGCGCTCGCAGGTACCACACACATCATTCATGGTAC
TTTGAGCATAATTGTAGTGACATGGACACAGCTAATGACAAAGGCATCAC
GTGGCAAACGACCCCGGGTCTTTTACCATGTAGGGGGGGCTCAAGGTGGC
AGTGACCCCCTGGTGCTATAAGACCCGCGGGTCTCTTACAGCGCAGGGGC
TGTTTACCGCTAGGGGGCTCTTTACCCGGTACTTTACGGTATTTCTAGGC
TGGGCATTCCTGCAGTCGTACAAAATCAACGCGAAGCTCAATGCAGGTGA
AAAACAGGCACCTCGTGATCCAGCAAGCAGTTGCATTGTCATTACGGCGC
TCCGCAACCGCTGAGCGTCAGGGCGCTACCTGCTGCTGCGCACGCCACTG
CAGGGCCAGACCGACTACCCCCTATCCGACACCGGCCTGGCGCAAGCACA
AATTGTCGCTGACCACCTGGCACAGTCCTATACCTTTGATTGCGTCTGGT
CATCGGACCTGAGCCGCGCAAGCGACACGGCGGCAGCGATCATGAGCCGG
CAGCGCGCACCGCCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAACA
GTCTGCGGCACCACAGCAGCAGTCAACGCCTTCGCTGCCGCCGTCACAGG
CTGACTCGCAGCAGCAGCTGCAGCCGTCATCGTCACCGCCCCCGCAGCCA
TCGCCGCCGCCGCCGCAGCAGCAGCCGCCGCGCGTGACGCTCGACCCGCT
GCTGCGCGAGGTGAACCTCGGCGTGCTGGAGACGCTGCCGCGCGGCACCG
GGCGGCAGCGCGCGCTCGCCATCAAGGCGGAGCGCGCCGGCGTGCCGCTC
GCGCAGTACGCGCCGCCGCCGAGCGAGACCATGGGCGACCTCACGCGCCG
CGCGGCGTCGTTCTGCGCGCTGCTAATCGACGCCGCGCGTGCACAGCGCA
GCGCAGGTGCCGCCGCGGCGCCGGCGACAGCGCCGCCGTCGCCGTCGGCG
CACGAGGACGGAGCGCCCGACGCCGCGGCGGCGGCGACTGCGGCGGCGGC
GACTGCGGTGGCGAGTGCGGCAGCGGCGGCGGCGGCGCCGGTGTACCTGG
CGGTCTCGCACGGCGGCTTCATGCACGCGCTGCTGACGAGCATCATGGGC
GTGGAGGGCGTGCGCAGCCTCGGCAACTGCTGCGTGTGCGAGGTGGACGT
GCTAGAGGAGCAGCGCCCAGGCGCGACGGCTGAGGGCAACAGCGGCGGCG
GCGAACTGTGTGGCGGCGGCGGCGGCGGCAAGCGCGGCGGCGGCGGCGCC
GTCTTGTACGCGCCGCGGCGCATCAACGACACGCGGCACCTGGACGCGGC
GGGCCTGCAGAGCTCCATGGTTGTGGAGAACCTGCTATGAACATTCGTCG
CCG

Coding sequence (CDS) from alignment at Contig_116:241008..243160+

>mRNA_11285 ID=mRNA_11285|Name=jgi.p|Trimin1|352358|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1059bp|location=Sequence derived from alignment at Contig_116:241008..243160+ (Tribonema minus UTEX_B_3156 )
ATGGCGGTGCTGTTCAAGCTTGTGCTGGTGAGACATGGCGAAACCACGGC
CAACAGGGATGGAGTGCTTCAGGGCCAGACCGACTACCCCCTATCCGACA
CCGGCCTGGCGCAAGCACAAATTGTCGCTGACCACCTGGCACAGTCCTAT
ACCTTTGATTGCGTCTGGTCATCGGACCTGAGCCGCGCAAGCGACACGGC
GGCAGCGATCATGAGCCGGCAGCGCGCACCGCCGCCGCCGCCGCCGCAGC
AGCAGCAGCAGCAGCAACAGTCTGCGGCACCACAGCAGCAGTCAACGCCT
TCGCTGCCGCCGTCACAGGCTGACTCGCAGCAGCAGCTGCAGCCGTCATC
GTCACCGCCCCCGCAGCCATCGCCGCCGCCGCCGCAGCAGCAGCCGCCGC
GCGTGACGCTCGACCCGCTGCTGCGCGAGGTGAACCTCGGCGTGCTGGAG
ACGCTGCCGCGCGGCACCGGGCGGCAGCGCGCGCTCGCCATCAAGGCGGA
GCGCGCCGGCGTGCCGCTCGCGCAGTACGCGCCGCCGCCGAGCGAGACCA
TGGGCGACCTCACGCGCCGCGCGGCGTCGTTCTGCGCGCTGCTAATCGAC
GCCGCGCGTGCACAGCGCAGCGCAGGTGCCGCCGCGGCGCCGGCGACAGC
GCCGCCGTCGCCGTCGGCGCACGAGGACGGAGCGCCCGACGCCGCGGCGG
CGGCGACTGCGGCGGCGGCGACTGCGGTGGCGAGTGCGGCAGCGGCGGCG
GCGGCGCCGGTGTACCTGGCGGTCTCGCACGGCGGCTTCATGCACGCGCT
GCTGACGAGCATCATGGGCGTGGAGGGCGTGCGCAGCCTCGGCAACTGCT
GCGTGTGCGAGGTGGACGTGCTAGAGGAGCAGCGCCCAGGCGCGACGGCT
GAGGGCAACAGCGGCGGCGGCGAACTGTGTGGCGGCGGCGGCGGCGGCAA
GCGCGGCGGCGGCGGCGCCGTCTTGTACGCGCCGCGGCGCATCAACGACA
CGCGGCACCTGGACGCGGCGGGCCTGCAGAGCTCCATGGTTGTGGAGAAC
CTGCTATGA