mRNA_11102 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|168646
Unique NamemRNA_11102
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|168646 vs. uniprot
Match: A0A836CB86_9STRA (Putative CTD small phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB86_9STRA)

HSP 1 Score: 451 bits (1160), Expect = 1.660e-160
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1 
Query:    1 MISLEGVDHVLPRVRQKLTVVLDLDECLVHSVFPNGDKYRQSEARPENINLVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQEVSAPPTVQLHL 663
            MISLEGVDHVLPRVRQKLTVVLDLDECLVHSVFPNGDKYRQSEARPENINLVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQEVSAPPTVQLHL
Sbjct:    1 MISLEGVDHVLPRVRQKLTVVLDLDECLVHSVFPNGDKYRQSEARPENINLVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQEVSAPPTVQLHL 221
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BLAST of jgi.p|Trimin1|168646 vs. uniprot
Match: D7FM26_ECTSI (Putative nuclear LIM interactor-interacting protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM26_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 6.970e-64
Identity = 110/198 (55.56%), Postives = 141/198 (71.21%), Query Frame = 1 
Query:   52 LTVVLDLDECLVHSVFPN----GDKYRQSEARPENINLVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEA--LERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQ 627
            +TVVLD+DECL+HS F       + YRQ E RP+ +N V+S  + L   +   VN+RPGL  FLE L+ DY+ +VFTA   +YA  VLD IDP+GT FH RLYR SCRQ +G  +LKDL     E+  + RTVLVDN+PLSFICQP+NGILV+S+YDDP+D AL+SV++LIRHLD   DVRP L  +F L+ +L EY+
Sbjct:    1 MTVVLDMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKG-AFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYR 197
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BLAST of jgi.p|Trimin1|168646 vs. uniprot
Match: A0A6H5L173_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L173_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 7.330e-63
Identity = 111/199 (55.78%), Postives = 141/199 (70.85%), Query Frame = 1 
Query:   49 KLTVVLDLDECLVHSVFPN----GDKYRQSEARPENINLVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEA--LERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQ 627
            K+TVVLD+DECL+HS F       + YRQ E RP  +N V+S  + L   +   VN+RPGL  FLE L+ DY+ +VFTA   +YA  VLD IDP+GT FH RLYR SCRQ +G  +LKDL     E+  + RTVLVDN+PLSFICQP+NGILV+S+YDDP+D AL+SV++LIRHLD   DVRP L  +F L+ +L EY+
Sbjct:  126 KMTVVLDMDECLLHSKFHGPGAASEAYRQLEERPNAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKG-AFLKDLSVLGVESTDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGEYR 323
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BLAST of jgi.p|Trimin1|168646 vs. uniprot
Match: H3GXJ8_PHYRM (FCP1 homology domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3GXJ8_PHYRM)

HSP 1 Score: 187 bits (475), Expect = 4.220e-56
Identity = 97/197 (49.24%), Postives = 132/197 (67.01%), Query Frame = 1 
Query:   46 QKLTVVLDLDECLVHSVFPNGDKYRQSEARPENI-NLVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQEV 633
            ++L +VLD+DECLVHS F N  +YRQSE RPE + +  DS  +V+   E  VVN+RPGL +FLE+ +  Y V VFTAG + Y + +LD +DP+G  F  R +R SC+Q +G ++LKDL    G  L R +LVDN+P+SF+ QPSNGI V S+YDD +D  L S+ K++  L   +DVRP L  LF L  +L E+Q V
Sbjct:   39 ERLALVLDMDECLVHSKFQNEVEYRQSEFRPEQLEDFADSFEIVMDDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRESCQQRKG-MFLKDLSVVRGGDLSRVILVDNNPVSFLMQPSNGIPVPSFYDDANDRTLESLSKVLASLQEVEDVRPRLHQLFRLADLLAEHQRV 234
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BLAST of jgi.p|Trimin1|168646 vs. uniprot
Match: A0A484EEH1_BRELC (FCP1 homology domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEH1_BRELC)

HSP 1 Score: 184 bits (468), Expect = 4.810e-55
Identity = 95/197 (48.22%), Postives = 135/197 (68.53%), Query Frame = 1 
Query:   46 QKLTVVLDLDECLVHSVFPNGDKYRQSEARPENI-NLVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQEV 633
            +++ +VLD+DECLVHS F N  ++RQ+E RPE++ +  DS  +V+   E VVVN+RPGL +FL++ +  Y + VFTAG + Y + VLDAIDP+G  F  R +R SC+Q +G ++LKDL    G  L R +LVDN+P+SF+ QPSNGI V S+YDD +D  L S+ K++  L   DDVRP L  LF L  +L E++ +
Sbjct:   39 ERIALVLDMDECLVHSKFQNEVEHRQNEFRPEHLKDYTDSFEIVMNDGESVVVNKRPGLDQFLKEAAKHYDLYVFTAGLEAYGKPVLDAIDPKGNLFAGRFFRESCKQRKG-MFLKDLSVIRGGELSRIILVDNNPVSFLMQPSNGIPVPSFYDDSNDRTLKSLTKVLASLQDVDDVRPRLHQLFHLADLLAEHKRL 234
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BLAST of jgi.p|Trimin1|168646 vs. uniprot
Match: A0A662Y5D0_9STRA (FCP1 homology domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662Y5D0_9STRA)

HSP 1 Score: 184 bits (468), Expect = 4.960e-55
Identity = 97/198 (48.99%), Postives = 132/198 (66.67%), Query Frame = 1 
Query:   43 RQKLTVVLDLDECLVHSVFPNGDKYRQSEARPENINLV-DSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQEV 633
            +++L +VLD+DECLVHS F N  +YRQSE RPE +    DS  +V+   E  VVN+RPGL +FLE+ +  + V VFTAG + Y + +LD +DP+G  F  R +R SC+Q +G ++LKDL   V   L R +LVDN+P+SF+ QPSNGI V S+YDD +D  L S+ K++  L   DDVRP L  LF L  +L E+Q V
Sbjct:   40 QERLALVLDMDECLVHSKFQNEVEYRQSEYRPEELEAYGDSFEIVMDDGERAVVNKRPGLDRFLEEAAKHFDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRASCQQRKG-MFLKDLS-VVRTDLSRVILVDNNPVSFLLQPSNGIPVPSFYDDVNDRTLDSLTKVLASLQEVDDVRPRLHQLFRLADLLAEHQRV 235
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BLAST of jgi.p|Trimin1|168646 vs. uniprot
Match: A0A836C7A9_9STRA (NLI interacting factor-like phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7A9_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.290e-53
Identity = 105/206 (50.97%), Postives = 136/206 (66.02%), Query Frame = 1 
Query:   46 QKLTVVLDLDECLVHSVFPN--GDKYRQSEARPENINLVDSMHLVLG-GVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALE----RTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQEVSAP 642
            ++LTV+LD+DECL+HS F       YRQ E RPE+I  V+S  + L  GV  V  N RPGL  FLE+L+    VVVFTA   +YA  VLD +DP G     RLYR SCRQ RG  +LKDL   +G   +    R VL+DN+P SF+CQP+NGILV+S+YDD  D AL+SVL+L++HL+   DVRP L  +F LE +L+EY+ +  P
Sbjct:   27 ERLTVILDMDECLLHSKFHGLGSIDYRQQEERPEDIGEVNSFCIPLDDGVAQV--NIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRG-AFLKDLS-VLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLREYRAMLFP 228
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BLAST of jgi.p|Trimin1|168646 vs. uniprot
Match: A0A3M6VFT3_9STRA (FCP1 homology domain-containing protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VFT3_9STRA)

HSP 1 Score: 179 bits (455), Expect = 4.410e-53
Identity = 92/197 (46.70%), Postives = 129/197 (65.48%), Query Frame = 1 
Query:   46 QKLTVVLDLDECLVHSVFPNGDKYRQSEARPENIN-LVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQEV 633
            +++ +VLD+DECLVHS F N  +YRQ+E RPE +   +DS  +V+   E  VVN+RPGL +FLE+ +  Y V VFTAG + Y + +LD +DP+G  F    +R SC+Q +G ++LKDL       L R +LVDN+P+SF+ QPSNGI V S+YDD  D  L S+ K++  +   +DVRP L  LF L  +L E+Q V
Sbjct:   39 ERIALVLDMDECLVHSKFQNEVEYRQNEYRPEQLEEYIDSFEIVMEDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDVLDPKGNLFAGHFFRESCKQRKG-MFLKDLSVIRDGDLSRVILVDNNPVSFLMQPSNGIPVPSFYDDTKDRTLESLSKVLASMQEVEDVRPRLHQLFRLADLLAEHQRV 234
[Close]
BLAST of jgi.p|Trimin1|168646 vs. uniprot
Match: A0A835Z333_9STRA (NLI interacting factor (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z333_9STRA)

HSP 1 Score: 178 bits (451), Expect = 4.920e-53
Identity = 106/199 (53.27%), Postives = 130/199 (65.33%), Query Frame = 1 
Query:   52 LTVVLDLDECLVHSVFPNGDK----YRQSEARPENINLVDSMHLVLG-GVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALE----RTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKE 621
            LTVVLD+DECL+HS F         YRQ E RPE +  V+S  L L  GV  V  N RPGL +FLEQL+    VVVFTA   +YA  VLD IDP G     RLYR SCRQ RG ++LKDL   +G A      R VL+DN+P SF+CQP+NGILV+S+YDD  D AL+ V++L+R L++  DVRP L  +F LE +LKE
Sbjct:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDGVAQV--NIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRG-VFLKDLSA-LGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 195
[Close]
BLAST of jgi.p|Trimin1|168646 vs. uniprot
Match: K3WRS1_GLOUD (FCP1 homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRS1_GLOUD)

HSP 1 Score: 179 bits (455), Expect = 8.680e-53
Identity = 96/201 (47.76%), Postives = 134/201 (66.67%), Query Frame = 1 
Query:   34 PRVRQKLTVVLDLDECLVHSVFPNGDKYRQSEARPENI-NLVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALERTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKEYQEV 633
            P   +++ +VLD+DECLVHS F N  +YRQSE RP  +    DS  +V+   E  +V++RPGL KFLE+ S  + V VFTAG + Y + +LD +DP+GT F  R +R SC+Q +G ++LKDL R V + L + +LVDN+P+SF+ QPSNGI V S+YDD +D  L S+ K++  L   DDVRP L  LF L  +L E+Q +
Sbjct:   59 PVEEERIALVLDMDECLVHSKFYNEVEYRQSEYRPTALAQYDDSFEIVMDDGERAIVHKRPGLDKFLEEASKHFDVYVFTAGLEAYGKPILDELDPKGTLFTGRFFRESCQQRKG-MFLKDL-RVVRKDLSKVILVDNNPVSFLMQPSNGIPVPSFYDDANDRTLESLTKVLTSLRELDDVRPRLHQLFRLADLLAEHQRM 257
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|168646 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CB86_9STRA1.660e-160100.00Putative CTD small phosphatase-like protein n=1 Ta... [more]
D7FM26_ECTSI6.970e-6455.56Putative nuclear LIM interactor-interacting protei... [more]
A0A6H5L173_9PHAE7.330e-6355.78FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
H3GXJ8_PHYRM4.220e-5649.24FCP1 homology domain-containing protein n=12 Tax=P... [more]
A0A484EEH1_BRELC4.810e-5548.22FCP1 homology domain-containing protein n=1 Tax=Br... [more]
A0A662Y5D0_9STRA4.960e-5548.99FCP1 homology domain-containing protein n=4 Tax=Pe... [more]
A0A836C7A9_9STRA2.290e-5350.97NLI interacting factor-like phosphatase-domain-con... [more]
A0A3M6VFT3_9STRA4.410e-5346.70FCP1 homology domain-containing protein n=9 Tax=Pe... [more]
A0A835Z333_9STRA4.920e-5353.27NLI interacting factor (Fragment) n=1 Tax=Tribonem... [more]
K3WRS1_GLOUD8.680e-5347.76FCP1 homology domain-containing protein n=1 Tax=Gl... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_59contigContig_59:163169..164727 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|168646|e_gw1.59.94.1
BRITEko00000,ko01000,ko01009,ko03021
KEGG koko:K15731,ko:K17616
EC3.1.3.16
GOsGO:0003674,GO:0003824,GO:0004721,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564
Descriptionphosphoprotein phosphatase activity
COG categoryK
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5190@1|root,KOG1605@2759|Eukaryota
Evalue1.14e-64
Seed ortholog2880.D7FM26
Hectar predicted targeting categoryother localisation
TranscriptId168968
TrackFilteredModels1
ProteinId168646
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168646gene_11102Tribonema minus UTEX_B_3156 geneContig_59 163169..164727 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|168646Trimin1|168646|e_gw1.59.94.1Tribonema minus UTEX_B_3156 polypeptideContig_59 163169..164727 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11102_4exon_11102_4Tribonema minus UTEX_B_3156 exonContig_59 163169..163432 -
exon_11102_3exon_11102_3Tribonema minus UTEX_B_3156 exonContig_59 163508..163588 -
exon_11102_2exon_11102_2Tribonema minus UTEX_B_3156 exonContig_59 164085..164327 -
exon_11102_1exon_11102_1Tribonema minus UTEX_B_3156 exonContig_59 164650..164727 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11102CDS_11102Tribonema minus UTEX_B_3156 CDSContig_59 164650..164727 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11102 ID=mRNA_11102|Name=jgi.p|Trimin1|168646|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=666bp|location=Sequence derived from alignment at Contig_59:163169..164727- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGATTAGCCTGGAGGGAGTGGATCACGTGCTGCCAAGGGTCAGGCAGAA
GCTTACGGTGGTGCTGGACTTGGACGAGTGCCTGGTGCACAGCGTGTTTC
CCAACGGTGACAAGTACCGCCAATCGGAGGCTAGGCCAGAGAACATCAAC
CTCGTTGACAGCATGCACCTTGTGCTGGGAGGAGTGGAGCCTGTGGTGGT
CAACAGGCGGCCTGGCCTCACAAAGTTCTTGGAGCAGCTTAGTGTAGACT
ATCATGTGGTTGTGTTTACCGCGGGGCGCAAGGAGTATGCCGAGGAGGTG
CTGGATGCCATCGACCCTCAGGGCACGTTCTTTCACCATCGGTTGTACCG
CTGCAGCTGCCGGCAGGCCCGCGGCAACATTTACCTTAAGGACCTGGATA
GACCTGTGGGTGAAGCCCTGGAGCGCACTGTTCTGGTGGACAACTCGCCT
CTCAGCTTCATCTGCCAGCCCAGCAATGGGATACTCGTCAGCAGCTGGTA
CGATGACCCCCACGACAATGCCCTCAGCAGCGTTCTCAAGCTCATCAGGC
ACCTGGACGCATGTGATGATGTGCGGCCCACACTCACTGCGCTGTTTGGG
CTGGAGCCGGTACTCAAGGAATACCAAGAGGTTAGTGCTCCTCCTACAGT
GCAGTTGCACTTGTAA
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protein sequence of jgi.p|Trimin1|168646

>Trimin1|168646|e_gw1.59.94.1 ID=Trimin1|168646|e_gw1.59.94.1|Name=jgi.p|Trimin1|168646|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=222bp
MISLEGVDHVLPRVRQKLTVVLDLDECLVHSVFPNGDKYRQSEARPENIN
LVDSMHLVLGGVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEV
LDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALERTVLVDNSP
LSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFG
LEPVLKEYQEVSAPPTVQLHL*
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mRNA from alignment at Contig_59:163169..164727-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11102 ID=mRNA_11102|Name=jgi.p|Trimin1|168646|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1559bp|location=Sequence derived from alignment at Contig_59:163169..164727- (Tribonema minus UTEX_B_3156 )
ATGATTAGCCTGGAGGGAGTGGATCACGTGCTGCCAAGGGTCAGGCAGAA
GCTTACGGTGGTGCTGGACTTGGACGAGGTAAGCTGCGACCTTGCGGGTT
GAGCATGGAGTACTGTTATTGCAGGCCGGTCAGGCCTTGCGCCCTGTCCT
GGTCAACGTCTGTGGATGACATGTCCTGTCGCCTCGGATCAGGGCTGGCA
CGTTTCATGTTGCACCTGCCGCTTTTAAGAATTGCCAGCCATTGTCATTC
GGAATAGTGTGTGTGCCTGAACTTCAAGTTACCATGATCTGCGAGCAACA
TTCAGTGCAGCAACCGTTGTTGTGTGATTGACTGCTATCACCGGCTTGCA
TAGTTCTATAGGAAAATGCTGAAGGACTTCTCTCCGTGCTTCGCTTGCAG
TGCCTGGTGCACAGCGTGTTTCCCAACGGTGACAAGTACCGCCAATCGGA
GGCTAGGCCAGAGAACATCAACCTCGTTGACAGCATGCACCTTGTGCTGG
GAGGAGTGGAGCCTGTGGTGGTCAACAGGCGGCCTGGCCTCACAAAGTTC
TTGGAGCAGCTTAGTGTAGACTATCATGTGGTTGTGTTTACCGCGGGGCG
CAAGGAGTATGCCGAGGAGGTGCTGGATGCCATCGACCCTCAGGTGTGTA
CATGTACACCAAAGCTGCCTGCCTTCAATATGGCACTGCAATACAGGAAG
CGCTGGTTGCTGGTTGCTGTTGACCACTTCAAGACTGACTAGTGAAGAGC
ACCACAGAAAACTAGACAGCGTGGCATCGTCCTATTTGCATCCTTTTAAA
AGTGAGTATTTGATTGTCACATCTGAAAGTTGTTCTCAACAACTTTGACG
CGAAACCGTGCAGTGTTGTGACTCAGCAGCGGGCACAGCTAATGCACAAT
GCACCAACACGCTGATCTTCGTGCGATGGCCACTTGAAGCGTGTCAACAC
AAAAAGATTGTCACTATGGTGTAGCGTGTTGCTGCTACTCAATTAACAAG
ATTGTCACTATGGTATAGCGTGTTGCTGCTACTGTGTTTTGCTGGTCAAC
ATTAAAGTCTCCAATCAGGTGCTGCCGTATGCTTTGCCTTGTGGACAGCT
CAAAGTGTTTTTGCTGATCCTTTGCTGTGTGCTTGCCAGGGCACGTTCTT
TCACCATCGGTTGTACCGCTGCAGCTGCCGGCAGGCCCGCGGCAACATTT
ACCTTAAGGACCTGGATAGAGTGACCGCACTGGAGCGGAGCGGCGAGTGC
CCCTGCCTGCGCCCCTCGCAAATGCTCTCAAGCTGGCACACGCAGCCTGT
GGGTGAAGCCCTGGAGCGCACTGTTCTGGTGGACAACTCGCCTCTCAGCT
TCATCTGCCAGCCCAGCAATGGGATACTCGTCAGCAGCTGGTACGATGAC
CCCCACGACAATGCCCTCAGCAGCGTTCTCAAGCTCATCAGGCACCTGGA
CGCATGTGATGATGTGCGGCCCACACTCACTGCGCTGTTTGGGCTGGAGC
CGGTACTCAAGGAATACCAAGAGGTTAGTGCTCCTCCTACAGTGCAGTTG
CACTTGTAA
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Coding sequence (CDS) from alignment at Contig_59:163169..164727-

>mRNA_11102 ID=mRNA_11102|Name=jgi.p|Trimin1|168646|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=666bp|location=Sequence derived from alignment at Contig_59:163169..164727- (Tribonema minus UTEX_B_3156 )
ATGATTAGCCTGGAGGGAGTGGATCACGTGCTGCCAAGGGTCAGGCAGAA
GCTTACGGTGGTGCTGGACTTGGACGAGTGCCTGGTGCACAGCGTGTTTC
CCAACGGTGACAAGTACCGCCAATCGGAGGCTAGGCCAGAGAACATCAAC
CTCGTTGACAGCATGCACCTTGTGCTGGGAGGAGTGGAGCCTGTGGTGGT
CAACAGGCGGCCTGGCCTCACAAAGTTCTTGGAGCAGCTTAGTGTAGACT
ATCATGTGGTTGTGTTTACCGCGGGGCGCAAGGAGTATGCCGAGGAGGTG
CTGGATGCCATCGACCCTCAGGGCACGTTCTTTCACCATCGGTTGTACCG
CTGCAGCTGCCGGCAGGCCCGCGGCAACATTTACCTTAAGGACCTGGATA
GACCTGTGGGTGAAGCCCTGGAGCGCACTGTTCTGGTGGACAACTCGCCT
CTCAGCTTCATCTGCCAGCCCAGCAATGGGATACTCGTCAGCAGCTGGTA
CGATGACCCCCACGACAATGCCCTCAGCAGCGTTCTCAAGCTCATCAGGC
ACCTGGACGCATGTGATGATGTGCGGCCCACACTCACTGCGCTGTTTGGG
CTGGAGCCGGTACTCAAGGAATACCAAGAGGTTAGTGCTCCTCCTACAGT
GCAGTTGCACTTGTAA
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