mRNA_11043 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|141745 vs. uniprot
Match: A0A836C7S7_9STRA (AAA_12 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7S7_9STRA) HSP 1 Score: 323 bits (829), Expect = 5.660e-112 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 1
Query: 1 MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGEDTGGGGAADDGSCVASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR 489
MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGEDTGGGGAADDGSCVASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR
Sbjct: 1 MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGEDTGGGGAADDGSCVASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR 163
BLAST of jgi.p|Trimin1|141745 vs. uniprot
Match: A0A6H5JSW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW9_9PHAE) HSP 1 Score: 166 bits (420), Expect = 1.590e-44 Identity = 93/165 (56.36%), Postives = 114/165 (69.09%), Query Frame = 1
Query: 1 MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGEDTGGGGAA--DDGSCVASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR 489
MIGDH QLRPKVE Y+L+V+SGRGFDL+VSLFERL +A YP L LQHRMPP +SALV+G+TYP LRD PG R + G+RDRV F+ H H E++ DDG V S+ NR+EV MV+ VKY+L Q G E + ++VVLTPY+AQLR LR
Sbjct: 948 MIGDHKQLRPKVEQYSLRVESGRGFDLNVSLFERLVKAGYPHTTLELQHRMPPEISALVKGLTYPRLRDGPGTVNRPPVLGIRDRVCFVGHHHNEESAASMRQRHDDGVSV-SKVNRYEVRMVAKTVKYLLLQ---GYEPD--------QIVVLTPYLAQLRELR 1100
BLAST of jgi.p|Trimin1|141745 vs. uniprot
Match: D8LJR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR0_ECTSI) HSP 1 Score: 164 bits (416), Expect = 5.480e-44 Identity = 92/165 (55.76%), Postives = 113/165 (68.48%), Query Frame = 1
Query: 1 MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGEDTGGG--GAADDGSCVASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR 489
MIGDH QLRPKVE Y+L+V+SGRGFDL+VSLFERL +A YP L LQHRMPP +SALV+G+TYP LRD PG R + G+RDRV F+ H H E++ DDG V S+ N +EV MV+ VKY+L Q G E + ++VVLTPY+AQLR LR
Sbjct: 956 MIGDHKQLRPKVEQYSLRVESGRGFDLNVSLFERLVKAGYPHTTLELQHRMPPEISALVKGLTYPGLRDGPGTANRPHVLGIRDRVCFVGHHHNEESAASMRQRQDDGVSV-SKVNGYEVRMVAKTVKYLLLQ---GYEPD--------QIVVLTPYLAQLRELR 1108
BLAST of jgi.p|Trimin1|141745 vs. uniprot
Match: A0A0D0ASR9_9AGAM (Uncharacterized protein n=1 Tax=Suillus luteus UH-Slu-Lm8-n1 TaxID=930992 RepID=A0A0D0ASR9_9AGAM) HSP 1 Score: 150 bits (378), Expect = 7.040e-39 Identity = 85/165 (51.52%), Postives = 108/165 (65.45%), Query Frame = 1
Query: 1 MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGEDTGG--GGAADDGSCVASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR 489
++GDH QLRPKV SYALQV+S +G+DL+ SLFERL +P A L QHRM P +SALVR +TYP L DAP +GRA + G++D ++F+ HAH ED G +D GS V S+ N +E GMV IV+Y+ QQ G G D +VVLTPY+ QL LR
Sbjct: 776 LVGDHKQLRPKVNSYALQVESDQGYDLNRSLFERLVLKGFPHATLTEQHRMRPEISALVRDLTYPELTDAPSTRGRADIRGIQDNIIFVNHAHPEDNEGRVSDRSDLGS-VTSKQNSYEAGMVLKIVRYLAQQ------GYGTDN-----IVVLTPYLGQLSKLR 928
BLAST of jgi.p|Trimin1|141745 vs. uniprot
Match: UPI001B879005 (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Suillus clintonianus TaxID=1904413 RepID=UPI001B879005) HSP 1 Score: 145 bits (366), Expect = 2.890e-37 Identity = 82/165 (49.70%), Postives = 106/165 (64.24%), Query Frame = 1
Query: 1 MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGEDTGG--GGAADDGSCVASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR 489
++GDH QLRPKV SYALQV+SG+G+DL++SLFERL +P L QHRM P +SAL+R +TYP L DA +GR + G++D +VF+ HAH ED G +D GS S+ N +E GMV IV+Y+ QQ G G D +VVLTPY+ QL LR
Sbjct: 753 LVGDHKQLRPKVNSYALQVESGQGYDLNMSLFERLVLKGFPHTTLTEQHRMRPEISALIRELTYPELTDAASTRGRGDIRGIQDNIVFVNHAHPEDHEGRVSDRSDLGSAT-SKQNSYEAGMVLKIVRYLAQQ------GYGTDN-----IVVLTPYLGQLSKLR 905
BLAST of jgi.p|Trimin1|141745 vs. uniprot
Match: UPI001B86C5B7 (P-loop containing nucleoside triphosphate hydrolase protein n=4 Tax=Suillus TaxID=5379 RepID=UPI001B86C5B7) HSP 1 Score: 145 bits (365), Expect = 3.950e-37 Identity = 82/165 (49.70%), Postives = 106/165 (64.24%), Query Frame = 1
Query: 1 MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGEDTGG--GGAADDGSCVASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR 489
+IGDH QLRPK++SYALQV+S +G+DL+ SLFERL +P A L QHRM P +S LVR +TYP L DA GRA + G++D ++F+ HAH ED G +D GS V S+ N +E GMV IV+Y+ QQ G G D +V+LTPY+ QL LR
Sbjct: 776 LIGDHKQLRPKIKSYALQVESDQGYDLNRSLFERLVLKGFPHATLTEQHRMRPEISTLVRELTYPELTDAASTHGRADIRGIQDNIIFVNHAHPEDNDGRVSDRSDLGS-VTSKQNSYEAGMVLKIVRYLAQQ------GYGTDN-----IVILTPYLGQLSKLR 928
BLAST of jgi.p|Trimin1|141745 vs. uniprot
Match: S7RNM6_GLOTA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) TaxID=670483 RepID=S7RNM6_GLOTA) HSP 1 Score: 145 bits (365), Expect = 3.950e-37 Identity = 88/164 (53.66%), Postives = 103/164 (62.80%), Query Frame = 1
Query: 1 MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGE-DTGGGGAADDGSCVASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR 489
+IGDH QLRPKV +Y L V+ G GFDL+ SLFERL YP L QHRM P +S LVR +TYP L DAP QGR L GVRD VVFI H H E D+ G A D + AS+ N FEV MV IV+Y+ QQ G G D+ +VVLTPY+ QLR L+
Sbjct: 776 LIGDHKQLRPKVNNYTLTVEKGDGFDLNRSLFERLVLKGYPHETLKAQHRMRPEISTLVRELTYPDLVDAPKTQGRPDLRGVRDNVVFIDHDHPEGDSSEIGEAKDVTTKASKHNEFEVQMVLKIVRYLAQQ------GYGTDK-----MVVLTPYLGQLRRLQ 928
BLAST of jgi.p|Trimin1|141745 vs. uniprot
Match: UPI001B85EC8C (P-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Suillus TaxID=5379 RepID=UPI001B85EC8C) HSP 1 Score: 144 bits (364), Expect = 5.390e-37 Identity = 83/165 (50.30%), Postives = 106/165 (64.24%), Query Frame = 1
Query: 1 MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGEDTGG--GGAADDGSCVASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR 489
+IGDH QLRPKV SYALQV+S +G+DL+ SLFERL +P A L QHRM P +SALVR +TYP L DA G +GR + G++D ++F+ HAH ED G +D GS S+ N +E GMV IV+Y+ QQ G G D +VV+TPY+ QL LR
Sbjct: 823 LIGDHKQLRPKVNSYALQVESDQGYDLNRSLFERLVLKGFPHATLTEQHRMRPEISALVRELTYPELTDAAGTRGRDDIRGIQDNIIFVNHAHPEDNEGRVSDRSDLGSAT-SKQNSYEAGMVLKIVRYLAQQ------GYGTDN-----IVVITPYLGQLSKLR 975
BLAST of jgi.p|Trimin1|141745 vs. uniprot
Match: A0A0C9SNA1_PAXIN (Uncharacterized protein n=1 Tax=Paxillus involutus ATCC 200175 TaxID=664439 RepID=A0A0C9SNA1_PAXIN) HSP 1 Score: 141 bits (355), Expect = 8.330e-36 Identity = 79/165 (47.88%), Postives = 101/165 (61.21%), Query Frame = 1
Query: 1 MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGEDTGGGGAADDGSC--VASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR 489
+IGDH QLRPKV Y L V+ G G+DL+ SLFERL +P L QHRM P +S LVRG+TYP L DAPG + R + G++ VVFI H + ED AD G C ++S+ N+FE MV IV+Y +QQ G G ++ VV+LTPY+ QL LR
Sbjct: 884 LIGDHQQLRPKVNKYELTVEQGSGYDLNKSLFERLVHKGFPYVTLQAQHRMRPEISTLVRGLTYPGLTDAPGTKNRDNIRGIQSDVVFIDHTYSEDDENR-IADRGDCGSISSKQNQFEASMVVKIVRYFVQQ------GYGSED-----VVILTPYLGQLALLR 1036
BLAST of jgi.p|Trimin1|141745 vs. uniprot
Match: A0A1B7MUL2_9AGAM (p-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Rhizopogon TaxID=5375 RepID=A0A1B7MUL2_9AGAM) HSP 1 Score: 140 bits (354), Expect = 1.190e-35 Identity = 82/165 (49.70%), Postives = 103/165 (62.42%), Query Frame = 1
Query: 1 MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRMPPAVSALVRGMTYPALRDAPGVQGRALLPGVRDRVVFIPHAHGEDTGG--GGAADDGSCVASRTNRFEVGMVSAIVKYVLQQQQRGGEGEGGDEGGVGEVVVLTPYVAQLRALR 489
+IGDH QLRPKV SY LQV+S +G+DL+ SLFERL +P A L QHRM P +SALVR +TYP L DAP GR + G++D ++F+ HAH ED D GS S+ N +EVGMV IV+Y+ QQ G G D +V+LTPY+ QL LR
Sbjct: 776 LIGDHKQLRPKVNSYPLQVESEQGYDLNRSLFERLVLKGFPHATLTQQHRMRPEISALVRELTYPELTDAPSTHGRDDIRGLQDNIIFVNHAHPEDNEVKISDRGDSGS-PTSKENSYEVGMVLKIVRYLAQQ------GYGTDN-----IVILTPYLGQLYKLR 928 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|141745 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_11043 ID=mRNA_11043|Name=jgi.p|Trimin1|141745|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=489bp|location=Sequence derived from alignment at Contig_88:305979..308074- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGATTGGCGACCACCTGCAGCTTCGCCCCAAGGTCGAGTCATACGCTCTback to top protein sequence of jgi.p|Trimin1|141745 >Trimin1|141745|gw1.88.79.1 ID=Trimin1|141745|gw1.88.79.1|Name=jgi.p|Trimin1|141745|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=163bp MIGDHLQLRPKVESYALQVQSGRGFDLDVSLFERLARARYPCAMLALQHRback to top mRNA from alignment at Contig_88:305979..308074- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_11043 ID=mRNA_11043|Name=jgi.p|Trimin1|141745|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2096bp|location=Sequence derived from alignment at Contig_88:305979..308074- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_88:305979..308074- >mRNA_11043 ID=mRNA_11043|Name=jgi.p|Trimin1|141745|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=489bp|location=Sequence derived from alignment at Contig_88:305979..308074- (Tribonema minus UTEX_B_3156 )back to top |