mRNA_11041 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|144568
Unique NamemRNA_11041
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|144568 vs. uniprot
Match: A0A835YL40_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL40_9STRA)

HSP 1 Score: 1219 bits (3153), Expect = 0.000e+0
Identity = 637/637 (100.00%), Postives = 637/637 (100.00%), Query Frame = 1
Query:    1 AAAAAAAEEGEEEKAEWQRLQREHGVQSTAMDELLVMSGMRAVKLRFLNICTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLGQQKPPQSVQETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFGGGEGEGGDRWVKVAITRLGRQRGTRGFGNARAVRILFDKVMQRQTARLNRAPGADPFTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXXVRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDEELLKILDLKMRKEQLTAKARHMHIMEARLAALAVLARRRDVATHFGNGGEVDNLLREAKVRKEGRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDPLDKM 1911
            AAAAAAAEEGEEEKAEWQRLQREHGVQSTAMDELLVMSGMRAVKLRFLNICTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLGQQKPPQSVQETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFGGGEGEGGDRWVKVAITRLGRQRGTRGFGNARAVRILFDKVMQRQTARLNRAPGADPFTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXXVRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDEELLKILDLKMRKEQLTAKARHMHIMEARLAALAVLARRRDVATHFGNGGEVDNLLREAKVRKEGRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDPLDKM
Sbjct:    1 AAAAAAAEEGEEEKAEWQRLQREHGVQSTAMDELLVMSGMRAVKLRFLNICTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLGQQKPPQSVQETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFGGGEGEGGDRWVKVAITRLGRQRGTRGFGNARAVRILFDKVMQRQTARLNRAPGADPFTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXXVRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDEELLKILDLKMRKEQLTAKARHMHIMEARLAALAVLARRRDVATHFGNGGEVDNLLREAKVRKEGRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDPLDKM 637          
BLAST of jgi.p|Trimin1|144568 vs. uniprot
Match: A0A835ZFP4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFP4_9STRA)

HSP 1 Score: 816 bits (2108), Expect = 2.200e-283
Identity = 457/642 (71.18%), Postives = 510/642 (79.44%), Query Frame = 1
Query:   13 AAAEEGEEEKAEWQRLQREHG-VQSTAMDELLVMSGMRAVKLRFLNICTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLGQ-QKPPQSVQETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFGGGEG-----EGGDRWVKVAITRLGRQRGTRGFGNARAVRILFDKVMQRQTARLNRAPGADPFTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXX--VRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDEELLKILDLKMRKEQLTAKARHMHIMEARLAALAVLARRRDVATHFGNGGEVDNLLREAKVRKEGRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDPLDKM 1911
            A AE+G+EE+AEW+RL+ ++  ++S AMDEL+ MSGMRA+KLRF+ I   V LDK+RGY LTD L+NVRLEGNPG GKTTVARLY RLL+DL   +     + ETSGADLADQG+ LLK QL  +++  GGVL +DEAYALLS  +GGQG Q      T   +   +         K          GLPSRFPETLTFEDYSDAQLL IFK L+A K G RPLQF  G       E GDRW +VAI RLGR+RG RGF NARAV ILFDK MQRQT RL     ADP+ +ERSDLLGE VPDLS S AW++LQ L+GL SVKRSI NLAELVKTNAALELEGRPLR VSLN+LFLGNPGTGKTTVA LYA ILRDLGLLSKGEA  KTASDF+G+VLGESE+KTR+IL+AA+G VCVIDEAYGLHAGAGXXXXX  VRGG DPY A VIDTLVEQIQNVPGEDRAVLMLGYREDMERMLK+NNPGLERRFALNDAF F DY DEELL+ILDLKMRKE LTAK      +EARLAA+AVLARRRDVATHFGNGGEVDNLLREAKVRKEGRR     AAR+DT+L+A DFD EYGR+P SAADLTQ+LFGDLVGC  PAAEL+RLRAVFL A+ RG+DPLDK+
Sbjct:  112 AEAEDGDEERAEWERLKLKYEPLKSEAMDELMAMSGMRAIKLRFMTIFVGVALDKRRGYKLTDHLFNVRLEGNPGSGKTTVARLYARLLQDLRIFRNYGTGIVETSGADLADQGIALLKSQLDTLKEDNGGVLVIDEAYALLSAGVGGQGKQRWTTAATPSLSPSPATT-------KTWRSSSNKTRGLPSRFPETLTFEDYSDAQLLAIFKGLVAGKRGTRPLQFEPGPHPDTGKEQGDRWARVAIARLGRRRGARGFANARAVLILFDKTMQRQTMRLKHNHDADPYIIERSDLLGEAVPDLSKSAAWQKLQCLVGLESVKRSILNLAELVKTNAALELEGRPLRPVSLNKLFLGNPGTGKTTVARLYARILRDLGLLSKGEAHTKTASDFIGSVLGESETKTRSILQAAKGSVCVIDEAYGLHAGAGXXXXXXXVRGGSDPYHAGVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKSNNPGLERRFALNDAFNFADYTDEELLEILDLKMRKEHLTAK------VEARLAAVAVLARRRDVATHFGNGGEVDNLLREAKVRKEGRRRDDSAAARMDTELVATDFDPEYGREPPSAADLTQQLFGDLVGCEGPAAELARLRAVFLMAKSRGIDPLDKV 740          
BLAST of jgi.p|Trimin1|144568 vs. uniprot
Match: D8LJR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJR0_ECTSI)

HSP 1 Score: 661 bits (1705), Expect = 3.610e-210
Identity = 372/672 (55.36%), Postives = 454/672 (67.56%), Query Frame = 1
Query:   46 EWQRLQREHGVQSTAMDELLVMSGMRAVKLRFLNICTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLG-----QQKPPQS------------------------------------VQETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFGGG--EGEGGDRWVKVAITRLGRQRGTRGFGNARAVRILFDKVMQRQTARLNRAPG-----------ADPFTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXXVRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDEELLKILDLKMRKEQLTAKARHMHIMEARLAALAVLARRRDVATHFGNGGEVDNLLREAKVRKEGRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDP 1899
            +W+RLQ   GV S  MD LL MSG+ A+K  FL++   VV+D++RGY  + R +NVRLEGNPG GKTTVARLY RLLKDLG     +++   +                                      ET+G DLAD G+  LK  L  I +AGGGVLFVDEAY L   + GG G QVLN LL E+EN R  LVVAFAGY K+M+ LFE NEGLPSRFP+ L FEDYSDA LL IFK LMA K G   L FG    E E  +RW KVA+ RLGR+RG+RGFGNARAVR+LFD V++RQ +RL+                DP+ L + DLLG +V  L  S++WR L+ ++GL +VK ++  LAE+V+TN  LE  G+P R+++LNR  LGNPGTGKTTVA L+A IL DLGLLSKGE ++KTASDFVG+VLGESESKTRAILKAAEGCV VIDEAY L AG+G        GGDPYR AV+DTLVEQ+QNVPGEDR VL+LGYR +ME  +++ NPGL RRFAL++AF F+DY DEELL IL  K+ +E LTA       +EA +AA  VL ++R  A+HFGNGGEV NLL EAK+RKE RR      ARLD +L+ +DFD EYG  P   A L  +LFGDL+GCA    +L+R+R+ F+HAQR G DP
Sbjct: 1743 QWKRLQTRWGVSSEGMDSLLEMSGLDAIKADFLSVAKLVVIDRERGYDPSARSFNVRLEGNPGTGKTTVARLYYRLLKDLGVFASAEERAADARAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVAGFVETTGTDLADNGVGGLKDMLKKIREAGGGVLFVDEAYTLEPQS-GGGGKQVLNFLLAEIENRRGELVVAFAGYAKNMETLFEFNEGLPSRFPKVLRFEDYSDALLLEIFKGLMAKKKGLGTLHFGDSAEEQEDPERWAKVAVARLGRRRGSRGFGNARAVRVLFDHVLERQASRLSSGDNDXXXXXXXXXXXDPYELTKPDLLGRSVSSLDESESWRTLRDMVGLGAVKSTVLALAEVVQTNRVLEEAGKPPRDIALNRCMLGNPGTGKTTVAMLFAGILADLGLLSKGEVVLKTASDFVGSVLGESESKTRAILKAAEGCVLVIDEAYSLRAGSGVGYKG-GSGGDPYRTAVVDTLVEQVQNVPGEDRCVLLLGYRAEMEEFMRDTNPGLARRFALDNAFSFEDYKDEELLSILRGKLHREHLTAG------VEALMAAADVLRKKRKTASHFGNGGEVANLLSEAKLRKEKRRKDGSLEARLDPELLPQDFDPEYGVGPIDGAALEDDLFGDLIGCANIKLQLTRIRSTFVHAQRLGRDP 2406          
BLAST of jgi.p|Trimin1|144568 vs. uniprot
Match: A0A6H5JSW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSW9_9PHAE)

HSP 1 Score: 642 bits (1656), Expect = 1.180e-203
Identity = 376/702 (53.56%), Postives = 454/702 (64.67%), Query Frame = 1
Query:   46 EWQRLQREHGVQSTAMDELLVMSGMRAVKLRFLNICTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLGQ----------------------------------------------------QKPPQSVQ------------------ETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFG-GGEGEGGDRWVKVAITRLGRQRGTRGFGNARAVRILFDKVMQRQTARLNRAPG------------ADPFTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXXVRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDEELLKILDLKMRKEQLTAKARHMHIMEARLAALAVLARRRDVATHFGNGGEVDNLLREAKVRKE-GRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDP 1899
            +W+RLQ   GV S  MD LL MSG+  +K  FL++   VV+D++RGY  + R +NVRLEGNPG GKTTVARLY RLLKDLG                                                     Q PP + +                  ET+GADLAD G+  LK  L  I +AGGGVLFVDEAY L   + GG G +VLN LL E+EN R  LVVAFAGY K+M+ LFE NEGLPSRFP+ L FEDYSDA LL IFK LMA K G   L FG   E E  +RW KVAI RLGR+RG+RGFGNARAVR+LFD+V++RQ +RL+                  P+ L + DLLG +V  L  S++WR L+G++GL +VK  +  LAE+V+TN  LE  G+P RN++LNR  LGNPGTGKTTVA L+A IL DLGLLSKGE ++KTASDFVG+VLGESESKTRAILKAAEGC  VIDEAY L AG+G        GGDPYR AV+DTLVEQ+QNVPGEDR VL+LGYR +ME  +++ NPGL RRFAL++AF F+DY DEELL IL  K+R+E LTA       ++A +AA  VL ++R  A+HFGNGGEV NLL EAK+RKE GRR      AR  T L   DFD EYG  P   A L  +LFGDL+GCA+   +L+R+R+ F+HAQR GLDP
Sbjct: 1768 QWKRLQTRWGVSSEGMDSLLEMSGLDTIKADFLSVAKLVVIDRERGYEPSARSFNVRLEGNPGTGKTTVARLYYRLLKDLGVFTSAEERAADARAAAEAAAKKKADDAEKARQDAERRAFQSAGLPYTAQQQQLQNPPATPRXXXXXXXXXAVALAAGFMETTGADLADNGVGGLKDMLRKIREAGGGVLFVDEAYTLEPQS-GGGGKKVLNFLLAEIENRRGELVVAFAGYAKNMETLFEFNEGLPSRFPKVLRFEDYSDALLLEIFKGLMAKKKGLGALHFGDSAEQEDPERWAKVAIARLGRRRGSRGFGNARAVRVLFDQVLERQASRLSSGDNDKXXXXXXXXXXXXPYELTKPDLLGWSVSSLDESESWRTLRGMVGLGAVKSVVLALAEVVQTNRVLEEAGKPPRNIALNRCMLGNPGTGKTTVAKLFAGILADLGLLSKGEVVLKTASDFVGSVLGESESKTRAILKAAEGCALVIDEAYSLRAGSGVGGKG-GSGGDPYRTAVVDTLVEQVQNVPGEDRCVLLLGYRAEMEEFMRDANPGLARRFALDNAFSFEDYKDEELLSILRGKLRREHLTAG------VDALMAAADVLRKKRKTASHFGNGGEVANLLSEAKLRKESGRRT----TAR--TALWKPDFDPEYGAGPMDGAALEDDLFGDLIGCADIKLQLTRIRSTFVHAQRLGLDP 2455          
BLAST of jgi.p|Trimin1|144568 vs. uniprot
Match: A0A6H5K5W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W9_9PHAE)

HSP 1 Score: 516 bits (1328), Expect = 1.980e-170
Identity = 289/515 (56.12%), Postives = 359/515 (69.71%), Query Frame = 1
Query:  445 GGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFG-GGEGEGGDRWVKVAITRLGRQRGTRGFGNARAVRILFDKVMQRQTARLNRAPGAD---------------PFTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXXVRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDY--------NDEELLKILDLKMRKEQLTAKARHMHIMEARLAALAVLARRRDVATHFGNGGEVDNLLREAKVRKE-GRRDGSDDAA-----RLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDP 1899
            GG G +V+N LL E+EN R  LVVAFAGY K+M+ LFE NEGLPSRFP+ L FEDYSDA LL IFK LMA K G   L  G   E E  +RW KVAI RLGR+RG+RGFGNARAV++LFD+V++RQ +RL+                     P+ L + DLLG +V  L  S++WR L+ ++GL +VK ++  LAE+V+TN  LE  G+P RN++LNR  LGNPGTGKTTVA L   IL DLGLL KGE ++KTASDFVG+VLGESESKTRAILKAAEGCV VIDEAY L AG+G        G DPYR AV+DTLVEQ+QNVPGEDR VL+LGYR +ME  +++ NPGL RRFAL++AF F++Y        +DEELL IL  K+R+E LTA       ++A +AA  VL ++R  A+HFGNGGEV NLL EAK+RKE GRR  +  A      +LD +L+ +DFD EYG  P   A L  +LFGDL+GCA+   +L+R+R+ F+ AQR G DP
Sbjct:   18 GGGGKKVVNFLLAEIENRRGELVVAFAGYAKNMESLFEFNEGLPSRFPKVLRFEDYSDALLLEIFKGLMAKKKGLGTLHCGDSAEQEDPERWAKVAIARLGRRRGSRGFGNARAVQVLFDQVLERQASRLSSGDNXXXXXXXXXXXXXXXXXPYELTKPDLLGWSVSSLDESESWRTLRDMVGLGAVKSAVLALAEVVQTNRVLEEAGKPPRNIALNRCMLGNPGTGKTTVAKLIDGILADLGLLPKGEVVLKTASDFVGSVLGESESKTRAILKAAEGCVLVIDEAYSLRAGSGVGGKG-GSGEDPYRTAVVDTLVEQVQNVPGEDRCVLLLGYRAEMEEFMRDANPGLARRFALDNAFSFENYKGACFHAKDDEELLSILRGKLRREHLTAG------VDALMAAADVLRKKRKTASHFGNGGEVANLLSEAKLRKESGRRTTARTALWKPGLQLDPELLPQDFDPEYGAGPMDGAALEDDLFGDLIGCADIKLQLTRIRSTFVRAQRLGRDP 525          
BLAST of jgi.p|Trimin1|144568 vs. uniprot
Match: A0A699ZJP6_HAELA (NFX1-type zinc finger-containing protein 1 (Fragment) n=2 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZJP6_HAELA)

HSP 1 Score: 486 bits (1251), Expect = 2.630e-158
Identity = 295/612 (48.20%), Postives = 383/612 (62.58%), Query Frame = 1
Query:   82 STAMDELLVMSGMRAVKLRFLNICTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLGQQKPPQSVQETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFGGGEGEGGDRWVKVAITRLGRQRGTRGFGNARAVRILFDKVMQRQTARL--NRAPGADP--FTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXXVRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDEELLKILDLKMRKEQLTAKARHMHIMEARLAALAVLARRRDVATHFGNGGEVDNLLREAKVRKEGRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDPLD 1905
            S A+ +LL ++G+  VK    N+   V L+K R   L  R YN+   GNPG GKTTVAR+Y  LLK+LG   P   V ETSG+ LA+ G+  LKK+L  +EK  GGVLF+DEAY L +  I   GA VL++LL EMEN R  LV   AGY K M+ L  +NEGLPSRF   +TF DYSD +L  I   ++A +G  +P +         ++  ++A  RLGRQRGT GFGNARAVR  +++ + RQ+AR    R  G +P  + L R DLLG    D+S+S A ++LQ  +GL SVK S+ANL +L++TNA LE   +P++ V+LNR+FLGNPGTGKTTVA +Y  +LRDLGLLSKG+ ++K  SDF+G+VLGESE KT AIL AA GCV VIDEAY L+ G+           DPY+ AVIDT+V ++Q VPG+DR VL+LGY E M+ +++  NPGL RRF L +A+ F DY DEELL I+     KE    K   +   E R A + VL + R    +FGN G V+NLL    +R E R  G  DAAR   + +A DF      + A A    Q +F DLVGC E  A+L   +A    +QR G DPLD
Sbjct:   26 SQALSKLLQLTGLEPVKREMFNLADQVELEKSRKRDLNSRQYNICFYGNPGTGKTTVARIYAALLKELGVL-PDAQVVETSGSALANGGVEQLKKELTKLEK--GGVLFLDEAYQL-NPKINPSGAAVLDYLLPEMENRRGKLVTVLAGYQKQMESLLGYNEGLPSRFSRCITFPDYSDKELTKILLDIIA-EGTPQPFKLQD------EKHARIAARRLGRQRGTVGFGNARAVRNFYEQAVARQSARCVXERQQGLNPDLWLLRRDDLLGPKQLDVSSSSALQELQAKVGLQSVKDSVANLLQLIRTNAELEEAEKPVKEVALNRVFLGNPGTGKTTVAGIYGRVLRDLGLLSKGDVVVKNPSDFMGSVLGESEQKTAAILDAAVGCVLVIDEAYSLNPGSKSK--------DPYKEAVIDTIVAKVQGVPGDDRCVLLLGYEEPMQALMREANPGLARRFQLANAWTFQDYKDEELLAIM-----KEAARRKGWELGWPELR-AGVQVLDKERR-RPNFGNAGAVNNLLATVAMRMEARMQGMSDAARAAAQPVAADF---LPPEDAKAVRADQ-VFKDLVGCKEALAKLKEWQATIKASQRMGKDPLD 607          
BLAST of jgi.p|Trimin1|144568 vs. uniprot
Match: A0A699ZNF2_HAELA (NFX1-type zinc finger-containing protein 1 (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699ZNF2_HAELA)

HSP 1 Score: 468 bits (1205), Expect = 1.170e-153
Identity = 289/612 (47.22%), Postives = 377/612 (61.60%), Query Frame = 1
Query:   82 STAMDELLVMSGMRAVKLRFLNICTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLGQQKPPQSVQETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFGGGEGEGGDRWVKVAITRLGRQRGTRGFGNARAVRILFDKVMQRQTARL--NRAPGADP--FTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXXVRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDEELLKILDLKMRKEQLTAKARHMHIMEARLAALAVLARRRDVATHFGNGGEVDNLLREAKVRKEGRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDPLD 1905
            S A+ +LL ++G+  VK    N+   V L+K R   L  R YN+   GNPG GKTTVAR+Y  LLK+LG   P   V ETSG+ LA+ G+  LKK+L  +EK  GGVLF+DEAY L   T    GA VL++LL EMEN R  LV   AGY K M+ L  +NEGLPSRF   +TF DYSD +L  I   ++A +G  +P +         ++  ++A  RLGRQRGT GFGNARAVR  +++ + RQ+AR    R  G +P  + L R DLLG    D S+S A ++L   +GL SVK S+ANL +L++TNA LE   +P++ V+LNR+FLGNPGTGKTT+A +Y  +LRDLGLLSKG+ ++K  SDF+G+VLGESE KT AIL AA GCV VIDEAY L+ G+           DPY+ AVIDT+V ++Q VPG+DR VL+LGY E M+ +++  NPGL RRF L +A+ F DYNDEELL I+     KE    K   +   E + A + VL + R    +FGN G V+NLL    +R E R  G  D AR   + +A DF      + A A    Q +F DLV      A+L   +A    +QR G DPLD
Sbjct:    8 SQALSKLLQLTGLEPVKREMFNLADQVELEKSRKRDLNSRQYNICFYGNPGTGKTTVARIYAALLKELGVL-PDAQVVETSGSALANGGVEQLKKELTKLEK--GGVLFLDEAYQLNPKT-NPSGAAVLDYLLPEMENRRGKLVTVLAGYQKQMESLLGYNEGLPSRFSRCITFPDYSDKELTKILLDIIA-EGKPQPFKLQD------EKHARIAARRLGRQRGTVGFGNARAVRNFYEQAVARQSARCVEERRQGLNPDLWLLRRDDLLGPKQLDASSSSALQELHAKVGLQSVKDSVANLLQLIRTNAELEEAEKPVKEVALNRVFLGNPGTGKTTIAGIYGQVLRDLGLLSKGDVVVKNPSDFMGSVLGESEQKTVAILDAAVGCVLVIDEAYSLNPGSKFK--------DPYKEAVIDTIVAKVQGVPGDDRCVLLLGYEEPMQALMREANPGLARRFQLANAWTFQDYNDEELLAIM-----KEAARRKGWELGWPELK-AGVQVLDKERR-RPNFGNAGAVNNLLATVAMRMEARMQGMSDVARASAQPVAADF---LPPEDAKAVRADQ-VFKDLV-----LAKLREWQATIKASQRMGKDPLD 584          
BLAST of jgi.p|Trimin1|144568 vs. uniprot
Match: A0A836BYK2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BYK2_9CHLO)

HSP 1 Score: 488 bits (1257), Expect = 2.500e-149
Identity = 307/613 (50.08%), Postives = 378/613 (61.66%), Query Frame = 1
Query:   82 STAMDELLVMSGMRAVKLRFLNICTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLGQQKPPQSVQETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFGGGEGEGGDRWVKVAITRLGRQRGTRGFGNARAVRILFDKVMQRQTARL--NRAPGADP--FTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXXVRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDEELLKILDLKMRKEQLTAKARHMHIME-ARLAALAVL-ARRRDVATHFGNGGEVDNLLREAKVRKEGRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDPL 1902
            S +M  L+ ++G+  VK   + +   V LDK+RG  L  + YNVR  GNPG GKTTVAR+Y  LLK+LG   P   V ETSGA+L   G++ LK+QL  +EK  GGVLF+DEAY L   T    GAQVL++LL EMEN R  LVVA AGY K MD L  HNEGLPSRF +  TF DYSD +L  IF  L+    G++  +F   +     R +++A  RLGR RGT GFGNARAVR  F+   +RQ AR+   R  G DP    LER DLLG    D     A R+L+G+ GLA+VK+ + +L  L+ TNA LE   +P R V+LNR+FLGNPGTGKTTVA LY  ILRDLGLLSKG+ ++K  +DFVG+VLGESE KT AIL+A+ GCV VIDEAYGLH           GG DP+R AVIDT+V ++Q VPG+DR VL+LGY E ME ML+N NPGL RRF L  A+ F+DY  E+LL I     RK       R   + E A LAA+  L A RR    +FGN G V+NLL  A +R E R  G   A R     +AEDF       P +      ++FGDL+GC E   +L   RA     Q  G DPL
Sbjct: 1975 SDSMAALMALTGLAPVKQAMVELAAGVELDKERGRPLGSKQYNVRFYGNPGTGKTTVARIYAGLLKELGVL-PGAEVVETSGAELLTGGVSKLKEQLKKLEK--GGVLFLDEAYQLNPKT-NQAGAQVLDYLLPEMENRRGKLVVALAGYRKQMDDLMAHNEGLPSRFVQEFTFPDYSDDELHTIFSDLIR---GEKVSRFTLAD----PRHLRIAARRLGRGRGTPGFGNARAVRNAFEAAQRRQAARVLAERDAGGDPDPLRLEREDLLGPRHLDARGCGALRELRGMRGLAAVKQQVDDLLGLIATNAELEEAEQPPRQVNLNRIFLGNPGTGKTTVAGLYGRILRDLGLLSKGDVVVKVPADFVGSVLGESEKKTEAILEASRGCVLVIDEAYGLH---------FDGGRDPFREAVIDTIVARVQGVPGDDRCVLLLGYEEQMEAMLRNANPGLARRFQLPQAWRFEDYGPEDLLAITREAARK-------RGWALGEGALLAAVEALEAERRK--PNFGNAGAVNNLLSAAAMRMEARLRGVSAAQRAQAVPLAEDF------LPPTPGGDPADIFGDLIGCREVLQKLREWRATITACQALGRDPL 2552          
BLAST of jgi.p|Trimin1|144568 vs. uniprot
Match: A0A0D2J4T0_9CHLO (Stage V sporulation protein K n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2J4T0_9CHLO)

HSP 1 Score: 449 bits (1156), Expect = 1.000e-147
Identity = 288/616 (46.75%), Postives = 360/616 (58.44%), Query Frame = 1
Query:  109 MSGMRAVKLRFLNICTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLG---------------------------------QQKPPQ---SVQETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFGGGEGEGGDRWVKVAITRLGRQR--GTRGFGNARAVRILFDKVMQRQTARL---NRAPGA-DPFTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXXVRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDEELLKILDLKMRKEQLTAKARHMHIMEARLAALAVLARRRDVATHFGNGGEVDNLLREAKVRKEGRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCA 1830
            ++G+ AVK R L +   V LDK+RG     R  N+R  GNPG GKTTVARLY +LL +LG                                  + PP+   +V ETSGA L    L    ++  D + A GGVLF+DEAY L   T    G +VL+ LLTE EN R  LVV  AGY   M++L  +NEGLPSRFP   TFED SD +L  IF  +MAA      L+         +RW ++A  RLGRQR  G  GFGNARAVR L+++ + RQ+AR+    R  GA DP  L R DLLG    D   S A ++L+ + GL  VK S+  L  L++TNA LE + RPL+ V LNR+FLGNPGTGKTTVA++Y  +LRDLGLLSKGE L+K  +DFVG+ LGESE KT AIL+ A GCV VIDEAYGLH  AG          DPYR AVIDTLV ++Q VPG+DR VL+LGYRE ME M+++ NPGL RRF + +A+ FDDY+ E+L  I+    +K        +   ++A LAAL V  RR     +FGN G V+NLL  A +R E R      AAR D   +  DF    G +   A+D    L  DLVGCA
Sbjct:    3 LTGLAAVKERMLQLRDEVELDKERGRPPNSRNANIRFYGNPGTGKTTVARLYAQLLSELGVLPTPKPXXXXXXPKQQLYVGYPYAPXXXXXAPPKAPPKDGPAVVETSGAKLTKADL----QKALDGDLAEGGVLFIDEAYQLNPKTNPLGGREVLDLLLTEAENRRGKLVVVLAGYRTPMEELMAYNEGLPSRFPAVFTFEDNSDEELCEIFMGMMAADKSGFKLE--------DERWARIATRRLGRQRDAGGAGFGNARAVRNLYEQSIARQSARVLAERREGGAPDPLLLRRDDLLGPKRLDAGGSKALQELEAMRGLRRVKESVQTLLGLIETNADLEEQERPLKEVCLNRVFLGNPGTGKTTVASIYGRVLRDLGLLSKGEVLVKVPADFVGSALGESEKKTAAILEEARGCVLVIDEAYGLHTTAGSK--------DPYRVAVIDTLVAKVQGVPGDDRCVLLLGYREQMEEMMRDANPGLARRFQMQNAWEFDDYSSEDLFFIMRAAAKKRYGWDLGHNE--LKAGLAALEVERRR----PNFGNAGAVNNLLAAAALRMEARTKSLPPAARADATPVPADF----GEEHEGASD-PGALLDDLVGCA 587          
BLAST of jgi.p|Trimin1|144568 vs. uniprot
Match: A0A835Y7R3_9CHLO (Uncharacterized protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y7R3_9CHLO)

HSP 1 Score: 483 bits (1244), Expect = 1.380e-147
Identity = 301/613 (49.10%), Postives = 378/613 (61.66%), Query Frame = 1
Query:   82 STAMDELLVMSGMRAVKLRFLNICTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLGQQKPPQSVQETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGGQGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLTFEDYSDAQLLGIFKSLMAAKGGDRPLQFGGGEGEGGDRWVKVAITRLGRQRGTRGFGNARAVRILFDKVMQRQTARL--NRAPGA--DPFTLERSDLLGENVPDLSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNRLFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESESKTRAILKAAEGCVCVIDEAYGLHAGAGXXXXXVRGGGDPYRAAVIDTLVEQIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDEELLKILDLKMRKEQLTAKARHMHIMEARLAAL--AVLARRRDVATHFGNGGEVDNLLREAKVRKEGRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDPL 1902
            S +M +L+ ++G+  VK   + +  +V LDK+RG  L  + YNVR  GNPG GKTTVAR+Y  LLK+LG   P   V ETSG++L   G++ LK+QL  ++K  GGVLF+DEAY L   T    GAQVL++LL EMEN R  LVV  AGY K MD L  HNEGLPSRF +  TF DYSD +L  IFK+L+ +   D+  +F   +     R +++A  RLGR RG  GFGNARAVR  F+   +RQ AR+   R  G   DP  LER DLLG    D S   A R+L+G+ GLA+VK+ + +L  L+ TNA LE   +P + V+LNR+FLGNPGTGKTTVA LY  ILRDLGLLSKG+ ++K  +DFVG VLGESE KT AIL+A++GCV VIDEAYGL+           GG DPYR AVIDT+V ++Q VPG+DR VL+LGY E ME ML+ +NPGL RRF L  A+ F+DY  E+LL I+    RK       R   + E  L A   A+ A RR    +FGN G V+NLL  A VR E R  G     R     +AEDF       P  A     ++FGDLVGC     +L   +A     Q  G DPL
Sbjct: 2179 SPSMAQLMALTGLAPVKRAMVELAAAVELDKERGRPLGAKQYNVRFHGNPGTGKTTVARIYAGLLKELGVL-PGAEVVETSGSELLTGGVSKLKEQLKKLDK--GGVLFLDEAYQLNPKT-NPMGAQVLDYLLPEMENQRGKLVVVLAGYRKQMDDLMAHNEGLPSRFAQEFTFPDYSDDELHTIFKNLIES---DKAPRFTLAD----PRHLRIAARRLGRGRGMTGFGNARAVRNTFEAAQRRQAARVLAERDAGGQPDPLRLEREDLLGPRHLDASGCAALRELRGMRGLAAVKQQVDDLLGLIATNAELEEAEQPPKQVNLNRIFLGNPGTGKTTVAGLYGRILRDLGLLSKGDVVVKVPADFVGTVLGESEKKTEAILEASKGCVLVIDEAYGLY---------WDGGRDPYREAVIDTIVARVQGVPGDDRCVLLLGYEEQMEAMLRKSNPGLARRFQLPQAWRFEDYGPEDLLAIIREAARK-------RGWALGEGALLAAVDALEAERRK--PNFGNAGAVNNLLSVAAVRMEARLRGMPPEQRARAAPVAEDF------LPPGAGGDPADIFGDLVGCRAVLQKLREWQATITACQALGRDPL 2756          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144568 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YL40_9STRA0.000e+0100.00P-loop containing nucleoside triphosphate hydrolas... [more]
A0A835ZFP4_9STRA2.200e-28371.18P-loop containing nucleoside triphosphate hydrolas... [more]
D8LJR0_ECTSI3.610e-21055.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSW9_9PHAE1.180e-20353.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5W9_9PHAE1.980e-17056.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A699ZJP6_HAELA2.630e-15848.20NFX1-type zinc finger-containing protein 1 (Fragme... [more]
A0A699ZNF2_HAELA1.170e-15347.22NFX1-type zinc finger-containing protein 1 (Fragme... [more]
A0A836BYK2_9CHLO2.500e-14950.08Uncharacterized protein n=1 Tax=Edaphochlamys deba... [more]
A0A0D2J4T0_9CHLO1.000e-14746.75Stage V sporulation protein K n=1 Tax=Monoraphidiu... [more]
A0A835Y7R3_9CHLO1.380e-14749.10Uncharacterized protein n=2 Tax=Edaphochlamys deba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_88contigContig_88:292632..298739 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|144568|gw1.88.92.1
DescriptionNfx1-type zinc finger-containing protein
COG categoryL
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0464@1|root,COG1112@1|root,KOG0730@2759|Eukaryota,KOG1807@2759|Eukaryota
Evalue5.92e-211
Seed ortholog2880.D8LJR0
Hectar predicted targeting categoryother localisation
TranscriptId144890
TrackFilteredModels1
ProteinId144568
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144568gene_11041Tribonema minus UTEX_B_3156 geneContig_88 292632..298739 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144568Trimin1|144568|gw1.88.92.1Tribonema minus UTEX_B_3156 polypeptideContig_88 292632..298739 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_11041_9exon_11041_9Tribonema minus UTEX_B_3156 exonContig_88 292632..292805 -
exon_11041_8exon_11041_8Tribonema minus UTEX_B_3156 exonContig_88 293402..293566 -
exon_11041_7exon_11041_7Tribonema minus UTEX_B_3156 exonContig_88 294459..294677 -
exon_11041_6exon_11041_6Tribonema minus UTEX_B_3156 exonContig_88 295369..295652 -
exon_11041_5exon_11041_5Tribonema minus UTEX_B_3156 exonContig_88 296220..296484 -
exon_11041_4exon_11041_4Tribonema minus UTEX_B_3156 exonContig_88 296904..297245 -
exon_11041_3exon_11041_3Tribonema minus UTEX_B_3156 exonContig_88 297715..297888 -
exon_11041_2exon_11041_2Tribonema minus UTEX_B_3156 exonContig_88 297988..298043 -
exon_11041_1exon_11041_1Tribonema minus UTEX_B_3156 exonContig_88 298508..298739 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_11041CDS_11041Tribonema minus UTEX_B_3156 CDSContig_88 298508..298739 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_11041 ID=mRNA_11041|Name=jgi.p|Trimin1|144568|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1911bp|location=Sequence derived from alignment at Contig_88:292632..298739- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGGCGGCGGCAGCGGCGGCGGAGGAGGGAGAGGAGGAGAAGGCGGAGTG
GCAGCGGCTGCAGCGCGAGCACGGGGTGCAGAGCACTGCCATGGATGAGC
TGCTGGTGATGTCGGGCATGCGCGCGGTGAAGCTGCGCTTCCTCAACATC
TGCACGAGCGTCGTGCTGGACAAGCAGCGGGGATACTGCCTCACGGACCG
CCTGTACAATGTGCGCCTCGAAGGGAACCCGGGCTGCGGCAAAACCACGG
TGGCGCGTCTGTACGGCCGATTGCTCAAAGACCTGGGACAGCAGAAGCCG
CCGCAGAGCGTCCAGGAGACGTCGGGGGCGGACCTGGCAGATCAGGGTCT
GAACCTGCTCAAGAAGCAGCTGGCGGACATTGAGAAGGCGGGCGGGGGCG
TGCTGTTTGTGGACGAGGCGTACGCGCTGCTGTCTGGCACCATTGGGGGG
CAGGGGGCGCAGGTGCTCAACCACCTGCTGACCGAAATGGAAAACCACCG
CGACTCGCTTGTAGTCGCCTTTGCGGGCTACCACAAGGACATGGACAAAC
TTTTTGAGCACAACGAGGGCCTCCCCAGCCGCTTCCCGGAGACACTCACC
TTTGAAGACTACTCGGATGCTCAGCTGCTGGGAATCTTCAAGTCGCTCAT
GGCGGCCAAGGGGGGCGATCGGCCCCTGCAGTTTGGTGGGGGGGAGGGGG
AGGGAGGGGATAGGTGGGTGAAGGTCGCCATCACAAGGCTTGGGCGGCAG
CGGGGGACGCGCGGATTTGGCAACGCGCGCGCCGTGCGCATACTCTTTGA
CAAGGTGATGCAGCGTCAGACAGCACGCCTCAACCGCGCCCCCGGCGCCG
ATCCCTTCACCCTGGAACGTTCCGATCTGCTGGGCGAGAATGTTCCTGAC
CTCAGCGCCTCGGACGCCTGGCGGCAGCTGCAGGGCCTGATCGGTCTGGC
CAGCGTCAAGCGCAGCATTGCTAATCTCGCGGAACTGGTGAAGACCAATG
CGGCACTGGAGCTTGAGGGGCGCCCGCTGCGGAATGTTTCGCTCAACAGG
CTGTTCCTCGGCAATCCAGGGACCGGCAAGACCACCGTGGCAGCGCTCTA
CGCGGCCATCCTGCGCGACCTAGGGCTGCTCTCCAAGGGCGAGGCCCTCA
TGAAGACCGCCAGCGATTTTGTGGGGGCCGTGCTGGGGGAGTCTGAGTCA
AAGACTCGCGCCATTCTCAAGGCCGCAGAGGGCTGCGTGTGCGTGATTGA
TGAGGCCTACGGGCTGCACGCCGGTGCTGGCGGCGGCGGCGGCGGCGTGC
GCGGCGGCGGCGACCCTTACCGCGCCGCCGTGATTGATACGCTGGTGGAG
CAGATCCAGAACGTTCCTGGGGAGGATCGCGCCGTGCTCATGCTGGGGTA
CCGTGAAGACATGGAACGTATGCTCAAGAACAACAACCCCGGGCTGGAGC
GGAGATTCGCTTTGAACGACGCCTTTGTCTTTGATGACTACAACGATGAG
GAGCTGTTGAAGATTCTGGACTTGAAGATGCGCAAGGAGCAGTTGACAGC
CAAGGCACGTCACATGCACATTATGGAAGCGAGGCTGGCGGCGTTGGCAG
TGCTCGCGCGCCGTCGCGATGTCGCGACGCACTTTGGCAACGGCGGCGAG
GTGGACAACCTGCTAAGAGAGGCCAAGGTCCGCAAGGAGGGCCGTCGCGA
CGGTTCGGACGATGCTGCCAGGCTTGACACAAAACTGATCGCCGAGGACT
TCGATTCCGAGTACGGGCGCCAGCCAGCCAGTGCAGCAGACCTCACACAG
GAGCTGTTTGGGGATCTGGTGGGGTGCGCAGAACCGGCGGCGGAACTGTC
TCGGCTGCGCGCGGTCTTCCTGCACGCGCAGCGCCGGGGGCTGGACCCCC
TGGACAAGATG
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protein sequence of jgi.p|Trimin1|144568

>Trimin1|144568|gw1.88.92.1 ID=Trimin1|144568|gw1.88.92.1|Name=jgi.p|Trimin1|144568|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=637bp
AAAAAAAEEGEEEKAEWQRLQREHGVQSTAMDELLVMSGMRAVKLRFLNI
CTSVVLDKQRGYCLTDRLYNVRLEGNPGCGKTTVARLYGRLLKDLGQQKP
PQSVQETSGADLADQGLNLLKKQLADIEKAGGGVLFVDEAYALLSGTIGG
QGAQVLNHLLTEMENHRDSLVVAFAGYHKDMDKLFEHNEGLPSRFPETLT
FEDYSDAQLLGIFKSLMAAKGGDRPLQFGGGEGEGGDRWVKVAITRLGRQ
RGTRGFGNARAVRILFDKVMQRQTARLNRAPGADPFTLERSDLLGENVPD
LSASDAWRQLQGLIGLASVKRSIANLAELVKTNAALELEGRPLRNVSLNR
LFLGNPGTGKTTVAALYAAILRDLGLLSKGEALMKTASDFVGAVLGESES
KTRAILKAAEGCVCVIDEAYGLHAGAGGGGGGVRGGGDPYRAAVIDTLVE
QIQNVPGEDRAVLMLGYREDMERMLKNNNPGLERRFALNDAFVFDDYNDE
ELLKILDLKMRKEQLTAKARHMHIMEARLAALAVLARRRDVATHFGNGGE
VDNLLREAKVRKEGRRDGSDDAARLDTKLIAEDFDSEYGRQPASAADLTQ
ELFGDLVGCAEPAAELSRLRAVFLHAQRRGLDPLDKM
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mRNA from alignment at Contig_88:292632..298739-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_11041 ID=mRNA_11041|Name=jgi.p|Trimin1|144568|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6108bp|location=Sequence derived from alignment at Contig_88:292632..298739- (Tribonema minus UTEX_B_3156 )
GCGGCGGCGGCAGCGGCGGCGGAGGAGGGAGAGGAGGAGAAGGCGGAGTG GCAGCGGCTGCAGCGCGAGCACGGGGTGCAGAGCACTGCCATGGATGAGC TGCTGGTGATGTCGGGCATGCGCGCGGTGAAGCTGCGCTTCCTCAACATC TGCACGAGCGTCGTGCTGGACAAGCAGCGGGGATACTGCCTCACGGACCG CCTGTACAATGTGCGCCTCGAAGGGAACCCGGGTAAGTGAGAGTGCCAGA CCCAGGCTGGCGGCCTCTCGCTCGTTCTGATTTTAATGCTGGACAGTGCA TGCAGAACGGATACACATGCATTTTAGTTCGCTCCCAGTAATCACTACCA CTCTCGGCCCCCGCCACTGCCACTGGTGCTTGACATGTGTAATAAATATC ACTACCGCTCTGTTGCTAGGAGCAAGGCATGATGTACATGCAATGCATAT AATTCTATGTTCATGATAAACGTTCCTTATTCCTGGGGTCGGGGAGCACA GTCAGCACCCCAGTAAGGCGACGTCATGCTCCTTTCGTGTTTAGCTTTTG AACCAATGGATACCCATCCATTACACCGGTGCAGTTGCGTGGTCGCAAAA CGCTAGGGCGAGTTACAATTGAAGAACGAAACTGCGGATTTATGCTTCCA CCCCCCACCCCCCCCCACCCCTCTCCACTGCCCCTGGCCCCGCCAGGCTG CGGCAAAACCACGGTGGCGCGTCTGTACGGCCGATTGCTCAAAGACCTGG GAGTCTTCAACGAGGCCGCCAAAAAAGCCGCTGCGAAAGCCGCACAAGCT GCCGCGCAGGCGCAGCAGCAGGCGCCCTACCAGCAGCAGCAGCAGCAGCA GCAGCAGAAGCCGCCGCAGAGCGTCCAGGAGACGTCGGGGGCGGACCTGG CAGATCAGGGTCTGAACCTGCTCAAGAAGCAGCTGGCGGACATTGAGAAG GCGGGCGGGGGCGTGCTGTTTGTGGACGAGGCGTACGCGCTGCTGTCTGG CACCATTGGGGGGCAGGGGGCGCAGGTAATGGCGCGTCAACTGCTGACTT GTCAAGTTCACCTCAGCTGGCCTACTTCAACCTCAGCTGCAATGTGGTGC TGCGGCTCGCATGGTCCATGACACACTTAGTGAGGATGGGGGTATTCCTG TCGAGTAGCTCTGTGTATTTGACTTGTGCAGTGCGATACAATGTCAACTT TAAAGTGTACATTGTGGCCGAGACTCTGAGATACATTGCTTATTGAAGCG CAGTATGCATGTCATTTGCTCATGCACTGATCTGCTCATGTGCAGCGTGG AAGCTGCATCTACATGGCGCAACAACAATACCGCCGCAGCTGAAACTCAA TTTGTATACTTTGAAGAATGTGCATGTACATATTCTCGTAGGCGTGTGTG TCTCACTAGCTCGCCTGGGATCCTGGGCTGTTGAATCTGCGAGCCGGTGC TGTCGTCTGAATTCACTTCAACTCCAACTCCTTTGCATGCGTAGGTGCTC AACCACCTGCTGACCGAAATGGAAAACCACCGCGACTCGCTTGTAGTCGC CTTTGCGGGCTACCACAAGGACATGGACAAACTTTTTGAGCACAACGAGG GCCTCCCCAGCCGCTTCCCGGAGACACTCACCTTTGAAGACTACTCGGAT GCTCAGCTGCTGGGAATCTTCAAGTCGCTCATGGCGGCCAAGGGGGGCGA TCGGCCCCTGCAGTTTGGTGGGGGGGAGGGGGAGGGAGGGGATAGGTGGG TGAAGGTCGCCATCACAAGGCTTGGGCGGCAGCGGGGGACGCGCGGATTT GGCAACGCGCGCGCCGTGCGCATACTCTTTGACAAGGTGAGCGGTGTCGA GCGCACGCCATTGAGAAAACGATGTCTGAAAACCTGTAGTCATGCTGATG CTGCGACGGTGCTTCAATACCTTTAGTTGCTAGAATCATTAGGGGGAGGG GGGGATGTCATGAGACAGCCAATGCCTGATAAGTGACACGCTTTGAACCG TCGCCCGTTGCCGTTGGCCGAGGGTGAGGGCCACTGTGAAGCTTACTGGC TGCTGCCGTGTGATCTAAAACAGCCCACACCGTCAGTCAAATGCACTGGG CTGGGTGGGAATGAGTGATCGCATACTTCAATCTTAAGAAGTAGGCCTTG GCCAACTCACATGCACTGCACTGCAGTAACTGTTCAGGTGTGACTCACCA TACAACAGCACATTCACCCCCTTCCCACCCGGGTCTGTGTAAAACGGGCT TGCAGGTGATGCAGCGTCAGACAGCACGCCTCAACCGCGCCCCCGGCGCC GATCCCTTCACCCTGGAACGTTCCGATCTGCTGGGCGAGAATGTTCCTGA CCTCAGCGCCTCGGACGCCTGGCGGCAGCTGCAGGGCCTGATCGGTCTGG CCAGCGTCAAGCGCAGCATTGCTAATCTCGCGGAACTGGTGAAGACCAAT GCGGCACTGGAGCTTGAGGGGCGCCCGCTGCGGAATGTTTCGCTCAACAG GCTGTTCCTCGGCAATCCAGGTACGATAACATAATTCAAGTATACTTCAA GTATACACCTCAACTCTTGCAACTTCATAAACACACGCCTAGTACATTGC TGCGACTTCAAGTATACTTCAAGGTACACCTCACTGTTGCGATTCCAGCC CACACGCCTAGTACGGTGCTGCAACTACGTTCTGCGATGGTGATGCGCAT CCAGGGTGTCGTTTCATGGGCTGATCCTCAGCAATATGGGGCGCTTCAGG CTTGCAATGTGAGCACACACAATTTCTCCTTTCGAACGCCACTGCTCCAG TGGCAGCACTTGCCCTGCCCGAAGCCGCCAAGTCAAGCAATGGCACTTTG TGAGAAGCAGAGGAGTGAAAATTTTGTGCTGCACCCATCATCTCAACTGA TCTGACAAGACATCAGCAGCGCGGCGCCAACCATAGTTGCTGCATTCATA TCGAAATACGCCCAGACACACTGGACTGTCATCATCAAAGACTGCCCCTT ACCCTCAGCGAACACGAAGCCCAACCCTAACCCTAATGCTAGCCCTAATG CACAGCAACCACTTGCGCGACGCTGCCGCGTGCGCAGGGACCGGCAAGAC CACCGTGGCAGCGCTCTACGCGGCCATCCTGCGCGACCTAGGGCTGCTCT CCAAGGGCGAGGCCCTCATGAAGACCGCCAGCGATTTTGTGGGGGCCGTG CTGGGGGAGTCTGAGTCAAAGACTCGCGCCATTCTCAAGGCCGCAGAGGG CTGCGTGTGCGTGATTGATGAGGCCTACGGGCTGCACGCCGGTGCTGGCG GCGGCGGCGGCGGCGTGCGCGGCGGCGGCGACCCTTACCGCGCCGCCGTG ATTGATACGCTGGTGGAGCAGGTGACGGAATGAGTTGTGCTGCAAACGAT TTCATGTGCTCTGTGTACATATAGCAGCAGCAGCAGTCCAGTGCTTCGTG TGCAGTGCAAGTTCAGTTTCTGCGCGTGATGTGGTATTGGCGTACAGCAG ACATCGTTGGTTGCCTGAACAATTCATGAGTGGGAACCTTACTGAGTTCC TGGGTTCTCAAGTGGGTTGGGCACGTGAGCTGTGCAACGCATGTGGCCCG GATGCAGGAAGTGTGTGCCCAGCACACTCACAAACATTCAGCGGCTGCAC AACATTGATTGACGTTGGCCAGTGCTGATGCATAGCTGGCACACTGCCGG TGCACTTGCAGGCTTGCCTGGACCGCTTGCATGGCAGTGCGCTGAAGCTG AAGTGCAACTTCAACTTTGTGCCAGTACGATCATCGTACAACCAATCATG GACACACGTGACTCGCAATCAATGAAGAGCCAGCACGCTTGGCCTCAGTG CTCTCACCATGGTTTTGAACATCAACGCAAAACATGGCCAGATCGTCTGC AACGTATTTGGCCATCCTCTTCCGGTTCCGGTGTTGACCTGTAGCACGGC ATGCAGCTTGGCACTTTGCAGACGTGCCGTTTTCCCTACAATAATCTTGT AAACGTTTACCACAAAGACGTCATAACATTGAAAACTCTATGCGCACTTG CCCGATCTGCAGATCCAGAACGTTCCTGGGGAGGATCGCGCCGTGCTCAT GCTGGGGTACCGTGAAGACATGGAACGTATGCTCAAGAACAACAACCCCG GGCTGGAGCGGAGATTCGCTTTGAACGACGCCTTTGTCTTTGATGACTAC AACGATGAGGAGCTGTTGAAGATTCTGGACTTGAAGATGCGCAAGGAGCA GTTGACAGCCAAGGCACGTCACATGCACATTGTGTCAGTTGCACAAGGGC GAATCTTGCGTATTTCCTAGGGTTTCTGCCCTTAAATGGAAGTTGCTAAA AGTAGGCAAGCCCTTGGTAATTCAAAGACTGCTCCCGCATGTGTAATGGA GCCAGTGTGCACAGAGCATCCATTGCAATCCGCGCACACACCCGGGCTTG AATACAAGTTGAAGTTACCGCTGATATCGGTAGAGGCAGTAAGCTGAAGC TGGCCTTGAGGAACACTGCCCATGTGTACCTAGTTGCAGTGCTCGCGCAA TAAATTGTGGCCTCTACCTAGCCTCAGTGGTCGTGGACTCTCCATGGCCC ACTCTGTGCTGTCCATGATCTTCAACGGATTACGCGCCCACATACCAGCT TGACTTTGATGTGTGTCGTGTTCATCGCCGCGGTGTCAGTCACCTTGTGG TTTACTTCATGAGACTTCATCAACCTCCTGAAAGTGGTGCGTCGCTAGCC GCTGCACTCTGTACTCTGCATGGTCTGCCGTACTACACGGGATACCCACA AAGCAAAACTTCAATGATGTGTGTCCCATCATCACGGTTTCAGTCACCTA GTAACGTAATCCATCAAAACTCATCAACCTCCTGAAACTGGTACGTCACT CACACAGCAACATCATGAACCTACGACATCCCCTCACATTAGAGCGTACT TTATGCACACGCCTGAGCGCCGCAGATGGAAGCAAGGCTGGCGGCGGTGG CAGTGCTCGCGCGCCGCCGCGACGTCGCGACGCACTTTGGCAACGATTCC ATGAACCTCATGCAAGTGGAGCGGCAGTCACACAACACTGGAAACAGTCG CATGGGCCTTTCTGAATCTACGGCATTCCCTAACACTGCAACGTCCCTCA CGCACAACGCCTGAGTGCTGCAGATGGAAGCGAGGCTGGCGGCGTTGGCA GTGCTCGCGCGCCGTCGCGATGTCGCGACGCACTTTGGCAACGGCGGCGA GGTGGACAACCTGCTAAGAGAGGCCAAGGTCCGCAAGGAGGGCCGTCGCG ACGGTTCGGACGATGCTGCCAGGCTTGACACAAAACTGGTAGGTGCCTCA AGAAGACGGTGCCGGGCGGTCAAACAGTAGCAGGTGCTGGTTGCCAAGTG CCAGTGCATGATGTGAATTAGGTGAATTAGGTTCACATCATGCACTGGCA AATGTGGGTAGGATGTACCAAATCCTGCAGGTATACCCACTTGTTGCACC CAGGTAGACAGCATGTATTGGTCTTGGGCTTTTCAGACTGTCATATGCAT ATGCCTGACCCAAAGAGTGAGTTTTAGGACTGCAGCAGGCCCAGATGCTG ATGCTGGTAGTTACCCACACCCTTTGTTTGGCATAGATTTGGGTTGCAGT TCTGACGACTGCCCACAGTTAGCAAGCCGTGCTGCGTGTTGCCAGAGCCC ATTTTCACATCATCCCTCAAGCGCTACACCGCATATAGGATGCACCGCTG ACCGCAACGTTGCCTCGAGCGCGCGCAGCAATGCATAATATACCTCAAAA TCAACCTGGCCGTACATGTACTAATAGTTGGTGTCACAGATCGCAGACAC CTCGACTGCGCGCTACAACGCATGTACCACCAGGCATCAACTTTAAGTCC AACCTGGCCGTGATGATGATGATCGCTGCCACAGATCGCCGAGGACTTCG ATTCCGAGTACGGGCGCCAGCCAGCCAGTGCAGCAGACCTCACACAGGAG CTGTTTGGGGATCTGGTGGGGTGCGCAGAACCGGCGGCGGAACTGTCTCG GCTGCGCGCGGTCTTCCTGCACGCGCAGCGCCGGGGGCTGGACCCCCTGG ACAAGATG
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Coding sequence (CDS) from alignment at Contig_88:292632..298739-

>mRNA_11041 ID=mRNA_11041|Name=jgi.p|Trimin1|144568|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1911bp|location=Sequence derived from alignment at Contig_88:292632..298739- (Tribonema minus UTEX_B_3156 )
GCGGCGGCGGCAGCGGCGGCGGAGGAGGGAGAGGAGGAGAAGGCGGAGTG
GCAGCGGCTGCAGCGCGAGCACGGGGTGCAGAGCACTGCCATGGATGAGC
TGCTGGTGATGTCGGGCATGCGCGCGGTGAAGCTGCGCTTCCTCAACATC
TGCACGAGCGTCGTGCTGGACAAGCAGCGGGGATACTGCCTCACGGACCG
CCTGTACAATGTGCGCCTCGAAGGGAACCCGGGCTGCGGCAAAACCACGG
TGGCGCGTCTGTACGGCCGATTGCTCAAAGACCTGGGACAGCAGAAGCCG
CCGCAGAGCGTCCAGGAGACGTCGGGGGCGGACCTGGCAGATCAGGGTCT
GAACCTGCTCAAGAAGCAGCTGGCGGACATTGAGAAGGCGGGCGGGGGCG
TGCTGTTTGTGGACGAGGCGTACGCGCTGCTGTCTGGCACCATTGGGGGG
CAGGGGGCGCAGGTGCTCAACCACCTGCTGACCGAAATGGAAAACCACCG
CGACTCGCTTGTAGTCGCCTTTGCGGGCTACCACAAGGACATGGACAAAC
TTTTTGAGCACAACGAGGGCCTCCCCAGCCGCTTCCCGGAGACACTCACC
TTTGAAGACTACTCGGATGCTCAGCTGCTGGGAATCTTCAAGTCGCTCAT
GGCGGCCAAGGGGGGCGATCGGCCCCTGCAGTTTGGTGGGGGGGAGGGGG
AGGGAGGGGATAGGTGGGTGAAGGTCGCCATCACAAGGCTTGGGCGGCAG
CGGGGGACGCGCGGATTTGGCAACGCGCGCGCCGTGCGCATACTCTTTGA
CAAGGTGATGCAGCGTCAGACAGCACGCCTCAACCGCGCCCCCGGCGCCG
ATCCCTTCACCCTGGAACGTTCCGATCTGCTGGGCGAGAATGTTCCTGAC
CTCAGCGCCTCGGACGCCTGGCGGCAGCTGCAGGGCCTGATCGGTCTGGC
CAGCGTCAAGCGCAGCATTGCTAATCTCGCGGAACTGGTGAAGACCAATG
CGGCACTGGAGCTTGAGGGGCGCCCGCTGCGGAATGTTTCGCTCAACAGG
CTGTTCCTCGGCAATCCAGGGACCGGCAAGACCACCGTGGCAGCGCTCTA
CGCGGCCATCCTGCGCGACCTAGGGCTGCTCTCCAAGGGCGAGGCCCTCA
TGAAGACCGCCAGCGATTTTGTGGGGGCCGTGCTGGGGGAGTCTGAGTCA
AAGACTCGCGCCATTCTCAAGGCCGCAGAGGGCTGCGTGTGCGTGATTGA
TGAGGCCTACGGGCTGCACGCCGGTGCTGGCGGCGGCGGCGGCGGCGTGC
GCGGCGGCGGCGACCCTTACCGCGCCGCCGTGATTGATACGCTGGTGGAG
CAGATCCAGAACGTTCCTGGGGAGGATCGCGCCGTGCTCATGCTGGGGTA
CCGTGAAGACATGGAACGTATGCTCAAGAACAACAACCCCGGGCTGGAGC
GGAGATTCGCTTTGAACGACGCCTTTGTCTTTGATGACTACAACGATGAG
GAGCTGTTGAAGATTCTGGACTTGAAGATGCGCAAGGAGCAGTTGACAGC
CAAGGCACGTCACATGCACATTATGGAAGCGAGGCTGGCGGCGTTGGCAG
TGCTCGCGCGCCGTCGCGATGTCGCGACGCACTTTGGCAACGGCGGCGAG
GTGGACAACCTGCTAAGAGAGGCCAAGGTCCGCAAGGAGGGCCGTCGCGA
CGGTTCGGACGATGCTGCCAGGCTTGACACAAAACTGATCGCCGAGGACT
TCGATTCCGAGTACGGGCGCCAGCCAGCCAGTGCAGCAGACCTCACACAG
GAGCTGTTTGGGGATCTGGTGGGGTGCGCAGAACCGGCGGCGGAACTGTC
TCGGCTGCGCGCGGTCTTCCTGCACGCGCAGCGCCGGGGGCTGGACCCCC
TGGACAAGATG
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