mRNA_10973 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|171498
Unique NamemRNA_10973
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: A0A836C8M2_9STRA (ATPase beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M2_9STRA)

HSP 1 Score: 317 bits (813), Expect = 1.200e-109
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1 
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGVQQDVSQ 477
            MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGVQQDVSQ
Sbjct:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGVQQDVSQ 159
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BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: B7T1R0_VAULI (ATP synthase subunit beta, chloroplastic n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T1R0_VAULI)

HSP 1 Score: 251 bits (642), Expect = 2.230e-79
Identity = 122/153 (79.74%), Postives = 137/153 (89.54%), Query Frame = 1 
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 459
            M  T T++GYV+QIIGPVLDV FPSGNLPKIYNA+NV N  +IIVCEVQQLLGDNKVRAV+MSATDGLKRG+EV DTGAPI+VPVG+ TLGRIFNILGEPVDNLG++    TLPIHR+AP FT+LETTP+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    1 MQTTSTDLGYVTQIIGPVLDVVFPSGNLPKIYNAINVLNKKNIIVCEVQQLLGDNKVRAVAMSATDGLKRGIEVHDTGAPINVPVGEVTLGRIFNILGEPVDNLGEISGAPTLPIHREAPSFTDLETTPSIFETGIKVVDLLAPYRRGGKIGL 153
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BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: A0A7S6U9Y1_9STRA (ATP synthase subunit beta, chloroplastic n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A7S6U9Y1_9STRA)

HSP 1 Score: 248 bits (632), Expect = 7.660e-78
Identity = 119/152 (78.29%), Postives = 137/152 (90.13%), Query Frame = 1 
Query:    4 TATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 459
            T++  N GYV+QIIGPV+DVTFPSG LPKIYNA+++K  +  I+CEVQQLLGDNKVRAVSMSATDGL+R VEV+DTGAPI+VPVG+ TLGRIFN+LGEPVDNLGDVD++ TLPIHR APKFT+LET PAIFETGIKVVDLLAPYRRGG  G+
Sbjct:    3 TSSGVNTGYVTQIIGPVVDVTFPSGILPKIYNALDIKTSNKSIICEVQQLLGDNKVRAVSMSATDGLQRNVEVLDTGAPINVPVGKATLGRIFNVLGEPVDNLGDVDKSETLPIHRPAPKFTDLETKPAIFETGIKVVDLLAPYRRGGKIGL 154
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BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: A0A7T7IGP2_9STRA (ATP synthase subunit beta n=1 Tax=Nematochrysopsis sessilis var. vectensis TaxID=2797601 RepID=A0A7T7IGP2_9STRA)

HSP 1 Score: 246 bits (629), Expect = 2.160e-77
Identity = 120/153 (78.43%), Postives = 136/153 (88.89%), Query Frame = 1 
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 459
            MTAT+  +GYV+QIIGPVLD+TFPSGNLP IYNA+NV+  + IIVCEVQQLLGDNKVRAVSMSATDGL+RGV+ IDTGAPI+VPVG  TLGRIFN+LGEPVD LGDVDR+ T PIHR AP FT+LET P+IFETGIKVVDLLAPYR+GG  G+
Sbjct:    1 MTATKFGVGYVTQIIGPVLDITFPSGNLPAIYNAINVQAKNGIIVCEVQQLLGDNKVRAVSMSATDGLQRGVDAIDTGAPINVPVGVCTLGRIFNVLGEPVDELGDVDRSVTFPIHRPAPAFTDLETQPSIFETGIKVVDLLAPYRKGGKIGL 153
[Close]
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: A0A1X9PV05_9RHOD (ATP synthase subunit beta n=4 Tax=Compsopogonophyceae TaxID=930023 RepID=A0A1X9PV05_9RHOD)

HSP 1 Score: 242 bits (618), Expect = 9.400e-76
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 1 
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 459
            M +T  NIG V+QIIGPVLD+ F SG LPK++NAV V +GD II CEVQQLLGDN+VRAV+MS+TDGLKRGVEV+D+GAPISVPVG PTLGRIFN+LGEPVDNLGDV + +TLPIHR AP FT+LET P+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    1 MVSTIKNIGTVTQIIGPVLDIEFNSGELPKVFNAVTVNSGDKIITCEVQQLLGDNRVRAVAMSSTDGLKRGVEVVDSGAPISVPVGTPTLGRIFNVLGEPVDNLGDVSKQDTLPIHRPAPLFTQLETKPSIFETGIKVVDLLAPYRRGGKIGL 153
[Close]
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: A0A7T7DA94_9STRA (ATP synthase subunit beta (Fragment) n=2 Tax=Tetrasporopsidaceae TaxID=2797588 RepID=A0A7T7DA94_9STRA)

HSP 1 Score: 242 bits (618), Expect = 9.400e-76
Identity = 117/148 (79.05%), Postives = 133/148 (89.86%), Query Frame = 1 
Query:   16 TNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 459
            +N+GYVSQIIGPVLD+TFPSG LP+I++AV+VK+   IIVCE+QQLLGDNKVRAVSMSATDGL+RG E IDT APISVPVG+ TLGRIFN+LGEPVD +G+V  T TLPIHRDAPKFTELET P+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    6 SNVGYVSQIIGPVLDITFPSGKLPQIFHAVHVKDNSKIIVCEIQQLLGDNKVRAVSMSATDGLRRGAEAIDTKAPISVPVGKITLGRIFNVLGEPVDEMGEVLATETLPIHRDAPKFTELETKPSIFETGIKVVDLLAPYRRGGKIGL 153
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BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: C6KIS4_AURAN (ATP synthase subunit beta, chloroplastic n=3 Tax=Pelagomonadales TaxID=54409 RepID=C6KIS4_AURAN)

HSP 1 Score: 233 bits (594), Expect = 3.710e-72
Identity = 110/154 (71.43%), Postives = 131/154 (85.06%), Query Frame = 1 
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGD-SIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 459
            M    TN+G V+QIIGPVLD+ F SG LPK+YNA+++     +++VCEVQQLLGDNKVRAVSMS+TDG+KRG+E +DTG+PISVPVG PTLGRIFNILG+PVD +G VD + TLPIHRDAP FTELET P++FETGIKVVDLLAPYRRGG  G+
Sbjct:    1 MLEVSTNVGNVTQIIGPVLDIEFTSGKLPKVYNAIDITMASGAVVVCEVQQLLGDNKVRAVSMSSTDGMKRGIEAVDTGSPISVPVGAPTLGRIFNILGQPVDEMGPVDSSETLPIHRDAPAFTELETKPSVFETGIKVVDLLAPYRRGGKIGL 154
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BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: M4IV75_CALTB (ATP synthase subunit beta, chloroplastic n=7 Tax=Florideophyceae TaxID=2806 RepID=M4IV75_CALTB)

HSP 1 Score: 232 bits (591), Expect = 9.680e-72
Identity = 111/150 (74.00%), Postives = 130/150 (86.67%), Query Frame = 1 
Query:   10 TQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 459
            T+ N G V+QIIGPVLD+ F +G LPKI+NA+ VKN ++II CEVQQLLGDN+VRAV+MS+T+GLKRG++VIDTG PISVPVG PTLGRIFN+LGEPVDNLG +   NTLPIHR AP FT+LET P+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    2 TKENFGSVTQIIGPVLDIEFKNGKLPKIFNALKVKNENNIITCEVQQLLGDNRVRAVAMSSTEGLKRGIQVIDTGQPISVPVGIPTLGRIFNVLGEPVDNLGIISSDNTLPIHRSAPTFTQLETKPSIFETGIKVVDLLAPYRRGGKIGL 151
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BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: B2XTA7_HETAK (ATP synthase subunit beta, chloroplastic n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XTA7_HETAK)

HSP 1 Score: 231 bits (589), Expect = 2.030e-71
Identity = 115/154 (74.68%), Postives = 126/154 (81.82%), Query Frame = 1 
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVD-RTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 459
            M  T  +IGY  QIIGPVLD+ FPSG LPKIYNA+ VK+    IVCEVQQLLGDN+VRAV+MS+TDGLKRG   +DTGAPISVPVG  TLGRIFN+LG PVD LGDVD  T TLPIHR AP FTELET P+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    1 MATTNESIGYTCQIIGPVLDIAFPSGKLPKIYNAIEVKSDSGTIVCEVQQLLGDNRVRAVAMSSTDGLKRGSTAVDTGAPISVPVGTQTLGRIFNVLGVPVDELGDVDSNTATLPIHRTAPAFTELETKPSIFETGIKVVDLLAPYRRGGKIGL 154
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BLAST of jgi.p|Trimin1|171498 vs. uniprot
Match: ATPB_PORPU (ATP synthase subunit beta, chloroplastic n=18 Tax=Eukaryota TaxID=2759 RepID=ATPB_PORPU)

HSP 1 Score: 231 bits (589), Expect = 2.080e-71
Identity = 112/153 (73.20%), Postives = 130/153 (84.97%), Query Frame = 1 
Query:    1 MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQLLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEPVDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGMAGV 459
            M +T  + G V+QIIGPVLD+ FP+G LPK++NA+ V++ D  I CEVQQLLGDNKVRAVSMS+T+GLKRGVEV+DTGAPISVPVG  TLGRIFN+LGEPVDNLG V   +TLPIHR AP FT+LET P+IFETGIKVVDLLAPYRRGG  G+
Sbjct:    1 MVSTTKSTGSVTQIIGPVLDIAFPNGQLPKVFNALKVQSTDGTITCEVQQLLGDNKVRAVSMSSTEGLKRGVEVVDTGAPISVPVGTNTLGRIFNVLGEPVDNLGPVSSESTLPIHRPAPAFTKLETKPSIFETGIKVVDLLAPYRRGGKIGL 153
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171498 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8M2_9STRA1.200e-109100.00ATPase beta subunit n=1 Tax=Tribonema minus TaxID=... [more]
B7T1R0_VAULI2.230e-7979.74ATP synthase subunit beta, chloroplastic n=1 Tax=V... [more]
A0A7S6U9Y1_9STRA7.660e-7878.29ATP synthase subunit beta, chloroplastic n=2 Tax=S... [more]
A0A7T7IGP2_9STRA2.160e-7778.43ATP synthase subunit beta n=1 Tax=Nematochrysopsis... [more]
A0A1X9PV05_9RHOD9.400e-7676.47ATP synthase subunit beta n=4 Tax=Compsopogonophyc... [more]
A0A7T7DA94_9STRA9.400e-7679.05ATP synthase subunit beta (Fragment) n=2 Tax=Tetra... [more]
C6KIS4_AURAN3.710e-7271.43ATP synthase subunit beta, chloroplastic n=3 Tax=P... [more]
M4IV75_CALTB9.680e-7274.00ATP synthase subunit beta, chloroplastic n=7 Tax=F... [more]
B2XTA7_HETAK2.030e-7174.68ATP synthase subunit beta, chloroplastic n=2 Tax=H... [more]
ATPB_PORPU2.080e-7173.20ATP synthase subunit beta, chloroplastic n=18 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_82contigContig_82:350427..350906 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|171498|e_gw1.82.95.1
KEGG TC3.A.2.1
BRITEko00000,ko00001,ko00002,ko00194,ko01000
KEGG ModuleM00157,M00158
KEGG Pathwayko00190,ko00195,ko01100,ko04714,ko05010,ko05012,ko05016,map00190,map00195,map01100,map04714,map05010,map05012,map05016
KEGG koko:K02112,ko:K02114,ko:K02133
EC3.6.3.14
GOsGO:0000275,GO:0002376,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0005754,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006950,GO:0006952,GO:0006955,GO:0008150,GO:0008152,GO:0008270,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009544,GO:0009570,GO:0009579,GO:0009605,GO:0009607,GO:0009620,GO:0009628,GO:0009814,GO:0009817,GO:0009987,GO:0010035,GO:0010038,GO:0010287,GO:0010319,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0031976,GO:0031977,GO:0031984,GO:0032991,GO:0033178,GO:0034220,GO:0034357,GO:0034641,GO:0034654,GO:0042221,GO:0042623,GO:0042625,GO:0042626,GO:0042651,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044769,GO:0045087,GO:0045259,GO:0045261,GO:0045267,GO:0046034,GO:0046390,GO:0046483,GO:0046689,GO:0046872,GO:0046914,GO:0046933,GO:0050832,GO:0050896,GO:0051179,GO:0051234,GO:0051704,GO:0051707,GO:0055035,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098542,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098807,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600
Preferred nameatpB
Descriptionproton-transporting ATP synthase activity, rotational mechanism
COG categoryC
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0055@1|root,KOG1350@2759|Eukaryota
Evalue1.91e-71
Seed ortholog55529.AAC35682
Hectar predicted targeting categoryother localisation
TranscriptId171820
TrackFilteredModels1
ProteinId171498
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171498gene_10973Tribonema minus UTEX_B_3156 geneContig_82 350427..350906 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10973_1exon_10973_1Tribonema minus UTEX_B_3156 exonContig_82 350427..350906 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10973CDS_10973Tribonema minus UTEX_B_3156 CDSContig_82 350427..350906 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171498Trimin1|171498|e_gw1.82.95.1Tribonema minus UTEX_B_3156 polypeptideContig_82 350427..350906 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10973 ID=mRNA_10973|Name=jgi.p|Trimin1|171498|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=480bp|location=Sequence derived from alignment at Contig_82:350427..350906- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACAGCAACCCAAACGAATATAGGTTATGTATCACAAATTATTGGTCC
TGTATTAGATGTTACTTTTCCATCAGGTAATTTACCAAAAATATATAATG
CTGTTAACGTAAAAAATGGGGACAGCATTATTGTATGTGAAGTGCAACAA
CTTCTTGGTGATAACAAAGTTCGTGCCGTATCTATGAGCGCAACAGATGG
TTTAAAACGTGGTGTAGAAGTAATTGATACTGGTGCTCCTATTAGTGTTC
CCGTAGGACAACCAACATTAGGACGTATTTTTAATATTCTAGGTGAACCT
GTAGATAATTTAGGCGATGTTGATCGTACAAATACATTACCAATTCACCG
TGATGCTCCTAAATTTACTGAATTAGAAACAACGCCTGCGATTTTCGAAA
CAGGTATTAAAGTTGTAGATTTACTTGCTCCTTATAGAAGAGGCGGAATG
GCTGGCGTGCAGCAGGATGTGTCTCAATGA
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protein sequence of jgi.p|Trimin1|171498

>Trimin1|171498|e_gw1.82.95.1 ID=Trimin1|171498|e_gw1.82.95.1|Name=jgi.p|Trimin1|171498|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=160bp
MTATQTNIGYVSQIIGPVLDVTFPSGNLPKIYNAVNVKNGDSIIVCEVQQ
LLGDNKVRAVSMSATDGLKRGVEVIDTGAPISVPVGQPTLGRIFNILGEP
VDNLGDVDRTNTLPIHRDAPKFTELETTPAIFETGIKVVDLLAPYRRGGM
AGVQQDVSQ*
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mRNA from alignment at Contig_82:350427..350906-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10973 ID=mRNA_10973|Name=jgi.p|Trimin1|171498|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=480bp|location=Sequence derived from alignment at Contig_82:350427..350906- (Tribonema minus UTEX_B_3156 )
ATGACAGCAACCCAAACGAATATAGGTTATGTATCACAAATTATTGGTCC
TGTATTAGATGTTACTTTTCCATCAGGTAATTTACCAAAAATATATAATG
CTGTTAACGTAAAAAATGGGGACAGCATTATTGTATGTGAAGTGCAACAA
CTTCTTGGTGATAACAAAGTTCGTGCCGTATCTATGAGCGCAACAGATGG
TTTAAAACGTGGTGTAGAAGTAATTGATACTGGTGCTCCTATTAGTGTTC
CCGTAGGACAACCAACATTAGGACGTATTTTTAATATTCTAGGTGAACCT
GTAGATAATTTAGGCGATGTTGATCGTACAAATACATTACCAATTCACCG
TGATGCTCCTAAATTTACTGAATTAGAAACAACGCCTGCGATTTTCGAAA
CAGGTATTAAAGTTGTAGATTTACTTGCTCCTTATAGAAGAGGCGGAATG
GCTGGCGTGCAGCAGGATGTGTCTCAATGA
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Coding sequence (CDS) from alignment at Contig_82:350427..350906-

>mRNA_10973 ID=mRNA_10973|Name=jgi.p|Trimin1|171498|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=480bp|location=Sequence derived from alignment at Contig_82:350427..350906- (Tribonema minus UTEX_B_3156 )
ATGACAGCAACCCAAACGAATATAGGTTATGTATCACAAATTATTGGTCC
TGTATTAGATGTTACTTTTCCATCAGGTAATTTACCAAAAATATATAATG
CTGTTAACGTAAAAAATGGGGACAGCATTATTGTATGTGAAGTGCAACAA
CTTCTTGGTGATAACAAAGTTCGTGCCGTATCTATGAGCGCAACAGATGG
TTTAAAACGTGGTGTAGAAGTAATTGATACTGGTGCTCCTATTAGTGTTC
CCGTAGGACAACCAACATTAGGACGTATTTTTAATATTCTAGGTGAACCT
GTAGATAATTTAGGCGATGTTGATCGTACAAATACATTACCAATTCACCG
TGATGCTCCTAAATTTACTGAATTAGAAACAACGCCTGCGATTTTCGAAA
CAGGTATTAAAGTTGTAGATTTACTTGCTCCTTATAGAAGAGGCGGAATG
GCTGGCGTGCAGCAGGATGTGTCTCAATGA
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