mRNA_10967 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|171429
Unique NamemRNA_10967
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|171429 vs. uniprot
Match: A0A835YKC0_9STRA (Leucine carboxyl methyltransferase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC0_9STRA)

HSP 1 Score: 653 bits (1684), Expect = 1.480e-236
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 1
Query:    1 MRSSADVNDAAVKGTADDAITGKLSAVTLGYFDDPFLVHFSKPAPGQPSRRPPIINRGNFARMACVDKVVRAFCGCEALSGDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLRQLAPLTQTQTLSQSDGDLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLAELSGNFPCRSVMRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLALAARGEQAEQFLQSLKLPAPLVRT 1005
            MRSSADVNDAAVKGTADDAITGKLSAVTLGYFDDPFLVHFSKPAPGQPSRRPPIINRGNFARMACVDKVVRAFCGCEALSGDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLRQLAPLTQTQTLSQSDGDLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLAELSGNFPCRSVMRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLALAARGEQAEQFLQSLKLPAPLVRT
Sbjct:    1 MRSSADVNDAAVKGTADDAITGKLSAVTLGYFDDPFLVHFSKPAPGQPSRRPPIINRGNFARMACVDKVVRAFCGCEALSGDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLRQLAPLTQTQTLSQSDGDLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLAELSGNFPCRSVMRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLALAARGEQAEQFLQSLKLPAPLVRT 335          
BLAST of jgi.p|Trimin1|171429 vs. uniprot
Match: D8LL47_ECTSI (Leucine carboxyl methyltransferase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL47_ECTSI)

HSP 1 Score: 224 bits (570), Expect = 1.450e-67
Identity = 144/332 (43.37%), Postives = 185/332 (55.72%), Query Frame = 1
Query:   22 NDAAVKGTADDAITGKLSAVTLGYFDDPFLVHF----SKPAPGQ------PSRR-PPIINRGNFARMACVDKVVRAFCGCEAL-----------SGDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLRQLAPLTQTQTLSQSDGDLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLAELSGNFPCRSVMRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLALAARGE 951
            +D +V+ TA DA  GKLSA +LGYF+D FL         P PG       P RR PPIINRGNFAR++C++K+V  F G                GD+    PSH        S S+    L   PQV+SLGAG D+ FFRL     A  GGYFE+DFP+    K   + ++P L  LA             DLRD   +  AL+ AG+D  APT+ +AECVLVYMEPA+S ALL  +                 GC LPG +P+PSL +   R   +G+ SA A+DML  ++ +LD A+V RA++IE LDE+EEW LIM HYCL +AA+GE
Sbjct:    8 SDESVQATASDAAAGKLSAASLGYFEDRFLEVLVGAAGAPVPGTAEATTPPVRRLPPIINRGNFARVSCMEKLVLEFIGTSPSHPSSVPHHVRGDGDEH---PSHKTD--CKESQSSIEEHLARKPQVISLGAGKDSLFFRLMDRGTAASGGYFEVDFPAVSRWKGGLVAKTPILSALA----NDLYKLVAADLRDITALEDALIIAGVDLAAPTIFLAECVLVYMEPADSGALLQRM-----------------GCLLPGLEPYPSLLSQEERFKKSGWDSANAIDMLQVFQELLDPAEVRRASKIEILDEIEEWELIMHHYCLVVAAKGE 313          
BLAST of jgi.p|Trimin1|171429 vs. uniprot
Match: A0A6H5JEL0_9PHAE (Leucine carboxyl methyltransferase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL0_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 2.300e-55
Identity = 104/222 (46.85%), Postives = 135/222 (60.81%), Query Frame = 1
Query:  331 PQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLRQLAPLTQTQTLSQSDGDLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLAELSGNFPCR---------------SVMRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLALAARGE 951
            PQV+SLGAG D+ FFRL     AP GGYFE+DFP+    K   + ++P L  LA             DLRD   +  AL+ AG+D  APT+ +AECVLVYMEPA+S+ALL   +  FP                  +M+ NI+  GC LPG +PFPSL +   R   +G+ SA A+DML  ++ +LD A+V RA++IE LDEVEEW LIM HYCL +AA+GE
Sbjct:   31 PQVISLGAGKDSLFFRLMDRGTAPSGGYFEVDFPAVSTWKGGLVAKTPILSALA----NDLYKLVAADLRDITALEDALIMAGVDLAAPTMFLAECVLVYMEPADSSALLQWCASKFPDSLFAAYEMTSPHDAFGKMMKQNIQRMGCMLPGLEPFPSLLSQEERFKKSGWDSASAIDMLQVFQELLDPAEVRRASKIEILDEVEEWELIMHHYCLVVAAKGE 248          
BLAST of jgi.p|Trimin1|171429 vs. uniprot
Match: A0A8J9WLX7_9CHLO (tRNA wybutosine-synthesizing protein 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WLX7_9CHLO)

HSP 1 Score: 190 bits (483), Expect = 2.440e-54
Identity = 132/337 (39.17%), Postives = 167/337 (49.55%), Query Frame = 1
Query:   25 DAAVKGTADDAITGKLSAVTLGYFDDPFLVHFSKPAPGQPSRRPPIINRGNFARMACVDKVVRAFCGC----EALSGDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLR-QLAP-----------LTQTQTLSQSDGDLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLAELSGNFPCRSV----------------MRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLALA 939
            D +V+GT DDA   KLS   LGYF D F+ +F +    + SRR P+INRG FAR+  +  +++ F       +A  G + +                          QV+SLGAG DTTFF +  +    R  +FE+DF    +RK A +  + PL  QL P             QT+ LS    DLRD NGV  ALLA+G DPQ PT ++AECVLVYME  ESAA++  L G F   +                 M  N+  RGC L G    P LGAH  R    G+  A A DM T Y   LD A+  RA R+E  DE EEW +I  HYCL LA
Sbjct:   12 DVSVQGTNDDAQISKLSCAKLGYFKDEFIKYFVR----RSSRRSPLINRGYFARVLALRGLLKQFFDVVSRLDASEGRQHVA-------------------------QVLSLGAGFDTTFFNIEAEGRN-RARWFEVDFKEVTQRKAAIIAANAPLHEQLGPNAKEKIHPGEGKVQTEALSVLPADLRDVNGVESALLASGFDPQLPTYVLAECVLVYMEADESAAVVRWL-GKFLSTAACVVYEQIKPGDAFGRQMLTNLECRGCPLRGIQATPDLGAHQRRFLNNGWQRADAKDMSTIYRAYLDPAEKRRAERLEIFDEFEEWHMIQDHYCLVLA 317          
BLAST of jgi.p|Trimin1|171429 vs. uniprot
Match: A0A7S0K6G7_CAFRO ([Phosphatase 2A protein]-leucine-carboxy methyltransferase (Fragment) n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K6G7_CAFRO)

HSP 1 Score: 178 bits (451), Expect = 3.560e-49
Identity = 125/341 (36.66%), Postives = 166/341 (48.68%), Query Frame = 1
Query:   34 VKGTADDAITGKLSAVTLGYFDDPFLVHFSKPAPGQPSRRPPIINRGNFARMACVDKVVRAFCGCEALSGDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLRQLAPLTQTQTLSQSDG------------------DLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLAELSGNFPCRSV---------------MRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLALAARGEQA 957
            V+ TADDA   K SAV  GYF DPF+  F      +P RR P+I+RG F R+AC+D+ VRAF   EA                  PSS            QVV+LG G D+TF+RLA     PR  + E+D P+   RK   +  +P L+     +  +  +Q D                   D+ D   V  AL +AG+D   PTL ++ECVL+Y+ P  S  LLA +SG FP  +V               M  N+  RG  L  F+ +P   A   RL AAG+      +ML A E ++    +  AAR EPLDEVEEW+++ SHYCLALA +   A
Sbjct:   37 VRATADDAAQCKASAVERGYFKDPFIGCFVD----RPRRRSPLIHRGYFVRVACLDRTVRAFV--EAAG----------------PSS------------QVVNLGGGVDSTFWRLAATGCNPRK-FVELDLPAVTRRKARCIAAAPLLKAALASSTGEEATQVDHGEGNGVSVAAAAYALCPCDIGDPAAVDAALTSAGIDRSLPTLFLSECVLIYLRPERSDGLLAWISGAFPAAAVAIYEQILPHDAFGAVMVRNLADRGLALRSFEAYPDCTAQAKRLLAAGFHRCTVANMLGAAEALVPRPAMVAAARAEPLDEVEEWSIMQSHYCLALAIKEPDA 342          
BLAST of jgi.p|Trimin1|171429 vs. uniprot
Match: A0A0G4GPT2_9ALVE ([Phosphatase 2A protein]-leucine-carboxy methyltransferase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GPT2_9ALVE)

HSP 1 Score: 178 bits (452), Expect = 5.560e-49
Identity = 120/340 (35.29%), Postives = 164/340 (48.24%), Query Frame = 1
Query:   25 DAAVKGTADDAITGKLSAVTLGYFDDPFLVHFSKPAPGQPSRRPPIINRGNFARMACVDKVVRAFCGCEALSGDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPP-----------LRQLAPLTQTQTLSQSDGDLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLAELSGNFPCRS----------------VMRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLALAARGEQAEQ 963
            D AV+GT DDA   KLSA+  GY++DPFL HF   A    +RR P+INRG +AR+A + KV+  F            +PP                     TPQ+V+LGAG DTTFF +          +FE+DFP  + RK  T+LR              + Q+  L +T  L     DLRD   +   +  A   P  PTL   ECVLVYM+  +S  +L   S      S                VM  N+++RGC L G   +PS+ +   RL  AG++  +  DM   Y++++D + V R  R+E  DE+EEW LI SHY +A+A    QA Q
Sbjct:   23 DLAVQGTTDDAALSKLSAINAGYYEDPFLKHFCSRA----ARRSPLINRGYYARVAGMRKVIDLFLDA---------VPPGM-------------------TPQLVNLGAGLDTTFFYVNSRCGDRPFVFFEVDFPELVARKSMTILRKEACWSVLAPNKDDIPQVGGLIRTDKLRMVGADLRDLQKLEGEVRGADFSPTQPTLFFCECVLVYMKGEQSDQVLRWASSLVHAPSSICIYEQCNPDDAFGRVMVENLQSRGCALLGLKDYPSIASQRRRLRTAGWAFCRICDMNDVYDKMIDQSDVMRIQRLELFDEIEEWRLIQSHYFIAVAVTSPQASQ 330          
BLAST of jgi.p|Trimin1|171429 vs. uniprot
Match: D0NVL0_PHYIT (Leucine carboxyl methyltransferase 1 n=13 Tax=Phytophthora TaxID=4783 RepID=D0NVL0_PHYIT)

HSP 1 Score: 176 bits (445), Expect = 7.360e-49
Identity = 125/339 (36.87%), Postives = 165/339 (48.67%), Query Frame = 1
Query:   22 NDAAVKGTADDAITGKLSAVTLGYFDDPFLVHFSKPAPGQPSRRPPIINRGNFARMACVDKVVRAFCGCEALSGDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLRQLAPLTQTQTL--SQSDG--------------DLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLAELSGNFPCRS---------------VMRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLALAAR 945
            +D AV+ TA DA   KLSA  LGY+ DPF+  F K     PSRR PIINRG +AR+A V+ +VR F G    +G  +                           QVV LGAG DT FFRL          YFE+DFP    +K++T+ R  PL  L  L   + L  + S G              DLRD +     + AAG+D   PTL V+ECVL+YME   S  L+A  +  F   S               VM  NI+ARGC L     FP++ A +AR     Y  AQ  DM   Y   LD A+ A+  ++E  DE+EE+ L+ +HYC+ +A++
Sbjct:   11 HDGAVRETASDASLCKLSASHLGYYTDPFVQFFVK----APSRRMPIINRGYYARVAAVESLVRKFLG----AGQHKK--------------------------QVVILGAGLDTMFFRLKNSEMLSNCEYFELDFPEVTMQKVSTIKRRKPLNGLLGLESPKDLMAAVSSGYTELNVPGYHLLPCDLRDLHATTAKMEAAGIDRSVPTLFVSECVLIYMEAKFSTQLVAWAASYFDDISFTLYEQILPDDAFGKVMMANIKARGCDLLSIHDFPTVEAQIARFTEHKYEVAQCWDMNKIYYHYLDPAERAKREKLEIFDELEEFHLLQAHYCVVVASK 315          
BLAST of jgi.p|Trimin1|171429 vs. uniprot
Match: K3WAX9_GLOUD (Leucine carboxyl methyltransferase 1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAX9_GLOUD)

HSP 1 Score: 175 bits (444), Expect = 1.010e-48
Identity = 121/339 (35.69%), Postives = 166/339 (48.97%), Query Frame = 1
Query:   22 NDAAVKGTADDAITGKLSAVTLGYFDDPFLVHFSKPAPGQPSRRPPIINRGNFARMACVDKVVRAFCGCEALSGDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLRQLAPLTQTQTL--SQSDG--------------DLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLA---------------ELSGNFPCRSVMRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLALAAR 945
            +D+AV  TA DA   KLSA  LGY+ DP++ +F K     PSRR PIINRG +AR+A V+ +V  F   E                              E   QVV LGAG DT FFRL       +  YFE+DFP    +K+  + +  PL  LA L   +    + S G              DLRD N   + L AAG+D  APTL ++ECVL+YM+   S  L+A               ++  +     VM  NI+ARGC L     +P+L A   R     + +AQA DM   Y + LDAA+ A+  ++E  DEVEE+ L+ +HYC+ +A++
Sbjct:   11 HDSAVMETASDASLCKLSASALGYYRDPYIQYFVK----SPSRRMPIINRGYYARVAAVETLVTRFLAAET-----------------------------EKKKQVVILGAGLDTMFFRLKEAGQLQQCEYFELDFPDVTMQKVMIMKKRKPLANLAGLATNEEFITAVSSGYAELNAPGYHLLPCDLRDINATKQKLEAAGIDQSAPTLFISECVLIYMDAQYSTQLIAWSVEFFQDVSYVLYEQILPDDAFGRVMMANIKARGCDLISIRDYPTLEAQTERFRMHHFEAAQAWDMNQIYYKYLDAAERAKREKLEIFDEVEEFHLLQAHYCVVVASK 316          
BLAST of jgi.p|Trimin1|171429 vs. uniprot
Match: A0A5J4XVE3_9CHLO (Leucine carboxyl methyltransferase 1 homolog n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XVE3_9CHLO)

HSP 1 Score: 175 bits (443), Expect = 1.310e-48
Identity = 120/331 (36.25%), Postives = 161/331 (48.64%), Query Frame = 1
Query:   22 NDAAVKGTADDAITGKLSAVTLGYFDDPFLVHFSKPAPGQPSRRPPIINRGNFARMACVDKVVRAFCGCEALSGDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLRQL-APLTQTQTLSQS----------DGDLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLAELSGNFPCR---------------SVMRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLAL 936
            ND  V+GT DDA   KLS V LGYF D +L HF + +    SRR P+INRG ++R A +   ++ F     ++  KQ             S P+          Q++SLGAG DTT+F+L  +  AP   Y+E+DFP   ++K A +     L +L  P  + Q + Q             DLRD   +  AL +AG  P  PT ++AECVLVYMEP ESAALL  L    P                   M  N+ +RGC L G    P+L AH  R     +  A+A D+ T Y+  LD     R  R+E  DE EEW +I  HYC+ +
Sbjct:    7 NDQTVQGTNDDAQISKLSCVKLGYFRDDYLQHFVRKS----SRRSPLINRGYYSRQAALRLTLKQFL---EITHSKQ-------------SGPT----------QILSLGAGFDTTWFQLEAEGVAPTH-YYEVDFPEVTKKKAAIMANRDTLHKLIGPKVEQQDIGQGRIHTANYSLLPVDLRDLGALQAALESAGFQPTIPTYVLAECVLVYMEPHESAALLKHLGQQLPSAVCVVYEQIHPEDAFGQQMMRNLESRGCPLKGLPSTPTLEAHRQRFLTNNWEKAEATDLDTIYKYHLDPQDKRRIERLEIFDEFEEWHMIQEHYCVTV 306          
BLAST of jgi.p|Trimin1|171429 vs. uniprot
Match: A0A2P4Y4X2_9STRA (Leucine carboxyl methyltransferase 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y4X2_9STRA)

HSP 1 Score: 174 bits (440), Expect = 4.260e-48
Identity = 123/339 (36.28%), Postives = 164/339 (48.38%), Query Frame = 1
Query:   22 NDAAVKGTADDAITGKLSAVTLGYFDDPFLVHFSKPAPGQPSRRPPIINRGNFARMACVDKVVRAFCGCEALSGDKQLLPPSHLPPPLAPSSPSTTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERKLATLLRSPPLRQLAPLTQTQTL--SQSDG--------------DLRDANGVVRALLAAGLDPQAPTLLVAECVLVYMEPAESAALLAELSGNFPCRS---------------VMRNNIRARGCRLPGFDPFPSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEEWTLIMSHYCLALAAR 945
            +D+AV+ TA DA   KLSA  LGY+ DPF+  F K     PSRR PIINRG +AR+A V+ +VR F      S  K+                           QVV LGAG DT FFRL          YFE+DFP    +K++T+ R  PL +L  L +T+    + S G              DLRD       +  AG+D   PTL V+ECVL+YME   S  L+A  +  F   S               VM +NI+ARGC L     FP++ A +AR     Y  AQ  DM   Y   LD  +  +  R+E  DE+EE+ L+ +HYC+ +A++
Sbjct:   10 HDSAVRETASDASLCKLSASKLGYYADPFVQFFVK----APSRRMPIINRGYYARVAAVEALVRKFLEAGDNSQQKK---------------------------QVVILGAGLDTMFFRLKSSELLANCEYFELDFPDVTMQKVSTIKRRKPLNELLGLGKTEDFMAAVSSGYAELNVPGYHLLPCDLRDLQATTVKMEKAGVDRSVPTLFVSECVLIYMEAKFSKQLVAWAASYFDDVSFALYEQILPDDAFGKVMMSNIKARGCDLLSIYDFPTIEAQIARFTEHHYEVAQCWDMNKIYYHYLDPIERVKRERLEIFDELEEFHLLQAHYCIVVASK 317          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|171429 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKC0_9STRA1.480e-236100.00Leucine carboxyl methyltransferase 1 n=1 Tax=Tribo... [more]
D8LL47_ECTSI1.450e-6743.37Leucine carboxyl methyltransferase 1 n=1 Tax=Ectoc... [more]
A0A6H5JEL0_9PHAE2.300e-5546.85Leucine carboxyl methyltransferase 1 n=1 Tax=Ectoc... [more]
A0A8J9WLX7_9CHLO2.440e-5439.17tRNA wybutosine-synthesizing protein 4 n=1 Tax=Coc... [more]
A0A7S0K6G7_CAFRO3.560e-4936.66[Phosphatase 2A protein]-leucine-carboxy methyltra... [more]
A0A0G4GPT2_9ALVE5.560e-4935.29[Phosphatase 2A protein]-leucine-carboxy methyltra... [more]
D0NVL0_PHYIT7.360e-4936.87Leucine carboxyl methyltransferase 1 n=13 Tax=Phyt... [more]
K3WAX9_GLOUD1.010e-4835.69Leucine carboxyl methyltransferase 1 n=1 Tax=Globi... [more]
A0A5J4XVE3_9CHLO1.310e-4836.25Leucine carboxyl methyltransferase 1 homolog n=1 T... [more]
A0A2P4Y4X2_9STRA4.260e-4836.28Leucine carboxyl methyltransferase 1 n=1 Tax=Phyto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_82contigContig_82:262200..266675 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|171429|e_gw1.82.108.1
BRITEko00000,ko00001,ko01000,ko01002,ko01009,ko03000,ko03016
KEGG rclassRC00003,RC00460,RC00745
KEGG ReactionR10586,R10587
KEGG Pathwayko04112,ko04212,map04112,map04212
KEGG koko:K01358,ko:K09272,ko:K15451,ko:K18066,ko:K18203
EC1.14.11.42,2.1.1.233,2.1.1.290,2.3.1.231,3.4.21.92
GOsGO:0000086,GO:0000278,GO:0001510,GO:0003674,GO:0003824,GO:0003880,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006479,GO:0006481,GO:0006725,GO:0006807,GO:0007049,GO:0007088,GO:0007346,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008175,GO:0008213,GO:0008276,GO:0008757,GO:0009058,GO:0009451,GO:0009966,GO:0009968,GO:0009987,GO:0010340,GO:0010467,GO:0010564,GO:0010646,GO:0010648,GO:0010941,GO:0010965,GO:0016070,GO:0016740,GO:0016741,GO:0018410,GO:0018423,GO:0019538,GO:0022402,GO:0023051,GO:0023057,GO:0030071,GO:0030488,GO:0031333,GO:0031590,GO:0031591,GO:0031974,GO:0031981,GO:0032259,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034470,GO:0034641,GO:0034660,GO:0036211,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043412,GO:0043414,GO:0043687,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0044839,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051726,GO:0051783,GO:0051983,GO:0051998,GO:0065007,GO:0070013,GO:0071704,GO:0090231,GO:0090266,GO:0090304,GO:0140096,GO:0140098,GO:0140101,GO:1900457,GO:1900458,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1901976,GO:1901987,GO:1901990,GO:1902099,GO:1903047,GO:1903504,GO:1905818
Preferred nameLCMT1
Descriptionprotein C-terminal leucine carboxyl O-methyltransferase activity
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG2918@1|root,KOG2918@2759|Eukaryota
Evalue2.38e-68
Seed ortholog2880.D8LL47
Hectar predicted targeting categoryother localisation
TranscriptId171751
TrackFilteredModels1
ProteinId171429
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171429gene_10967Tribonema minus UTEX_B_3156 geneContig_82 262200..266675 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|171429Trimin1|171429|e_gw1.82.108.1Tribonema minus UTEX_B_3156 polypeptideContig_82 262200..266675 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10967_1exon_10967_1Tribonema minus UTEX_B_3156 exonContig_82 262200..262451 +
exon_10967_2exon_10967_2Tribonema minus UTEX_B_3156 exonContig_82 262873..263147 +
exon_10967_3exon_10967_3Tribonema minus UTEX_B_3156 exonContig_82 263223..263386 +
exon_10967_4exon_10967_4Tribonema minus UTEX_B_3156 exonContig_82 264560..264783 +
exon_10967_5exon_10967_5Tribonema minus UTEX_B_3156 exonContig_82 266583..266675 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10967CDS_10967Tribonema minus UTEX_B_3156 CDSContig_82 262200..262451 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10967 ID=mRNA_10967|Name=jgi.p|Trimin1|171429|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1008bp|location=Sequence derived from alignment at Contig_82:262200..266675+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGATCTTCGGCGGACGTCAACGATGCAGCGGTGAAGGGCACGGCGGA
CGACGCCATTACGGGCAAGCTGAGCGCTGTCACTCTCGGATACTTCGATG
ACCCCTTCCTGGTGCACTTCAGCAAGCCAGCGCCCGGCCAGCCAAGCCGC
AGGCCTCCCATAATCAACAGGGGCAACTTTGCCAGGATGGCTTGTGTTGA
CAAGGTGGTCAGGGCGTTCTGCGGCTGCGAGGCACTCAGTGGGGACAAGC
AGCTGCTGCCCCCCTCACACTTGCCCCCCCCCCTTGCGCCATCATCACCC
TCCACGACCATTCCACCTCTCGAAACGACGCCGCAGGTGGTGTCCCTCGG
CGCAGGCAACGACACCACGTTCTTCCGCCTAGCGCGCGACAGCGCCGCGC
CCCGAGGCGGCTACTTCGAGATCGACTTCCCATCCACCATGGAGCGGAAG
CTGGCGACGCTCCTGCGATCGCCGCCGCTGCGCCAGCTGGCACCACTCAC
TCAGACTCAGACTCTCAGTCAATCCGACGGGGACCTGCGAGACGCCAACG
GGGTGGTGAGGGCGCTGCTCGCGGCCGGTCTCGATCCGCAGGCGCCGACG
CTTCTGGTGGCAGAGTGCGTGCTGGTGTACATGGAGCCGGCGGAGTCCGC
GGCGCTGCTGGCGGAACTCTCCGGGAACTTTCCGTGCAGGTCGGTGATGC
GCAACAACATCCGCGCGCGCGGCTGCCGCCTCCCCGGCTTCGACCCCTTC
CCCTCCCTCGGCGCGCACGTGGCACGGCTCAACGCGGCAGGATACAGCAG
CGCTCAGGCGTTGGACATGCTGACGGCGTACGAGAGGGTGTTGGACGCGG
CGCAGGTGGCGCGCGCGGCGCGCATAGAGCCGCTGGATGAAGTGGAGGAG
TGGACGCTGATCATGAGCCACTACTGCCTGGCGCTGGCGGCGCGCGGCGA
GCAGGCGGAGCAGTTCCTGCAGAGCTTGAAGCTGCCGGCGCCGCTCGTGA
GAACTTGA
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protein sequence of jgi.p|Trimin1|171429

>Trimin1|171429|e_gw1.82.108.1 ID=Trimin1|171429|e_gw1.82.108.1|Name=jgi.p|Trimin1|171429|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=336bp
MRSSADVNDAAVKGTADDAITGKLSAVTLGYFDDPFLVHFSKPAPGQPSR
RPPIINRGNFARMACVDKVVRAFCGCEALSGDKQLLPPSHLPPPLAPSSP
STTIPPLETTPQVVSLGAGNDTTFFRLARDSAAPRGGYFEIDFPSTMERK
LATLLRSPPLRQLAPLTQTQTLSQSDGDLRDANGVVRALLAAGLDPQAPT
LLVAECVLVYMEPAESAALLAELSGNFPCRSVMRNNIRARGCRLPGFDPF
PSLGAHVARLNAAGYSSAQALDMLTAYERVLDAAQVARAARIEPLDEVEE
WTLIMSHYCLALAARGEQAEQFLQSLKLPAPLVRT*
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mRNA from alignment at Contig_82:262200..266675+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10967 ID=mRNA_10967|Name=jgi.p|Trimin1|171429|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4476bp|location=Sequence derived from alignment at Contig_82:262200..266675+ (Tribonema minus UTEX_B_3156 )
ATGCGATCTTCGGCGGACGTCAACGATGCAGCGGTGAAGGGCACGGCGGA CGACGCCATTACGGGCAAGCTGAGCGCTGTCACTCTCGGATACTTCGATG ACCCCTTCCTGGTGCACTTCAGCAAGCCAGCGCCCGGCCAGCCAAGCCGC AGGCCTCCCATAATCAACAGGGGCAACTTTGCCAGGATGGCTTGTGTTGA CAAGGTGGTCAGGGCGTTCTGCGGCTGCGAGGCACTCAGTGGGGACAAGC AGGTGAGCTTGGGGTGTGTATGACACACCGAACTTTGCAATTAACATAAT TTGACCTGATTATCAACTTCACTGCGCTGGAACCATTTTCGAAGTCGGCC ATTCTGAGAAGTGTGATGTTACCACTGGTGTAATCAGCAGTTGCAGTATT TCGAGTGGTGCGGTGTATGTATGCTCTGTGCTCATGCGCGCTACGGAGTC AAACCTCATGATGGCGCACTCATTTCCGCTTCTTGCAACACATCATGAAA GTGTCCCCAAGCGCACTCAAGAAACTGCAGCGTCACGCTCACACGTTGTG GAGCACCATCGTTGCTGGTGTGTGCAGTCCGCATCATGCGCATCCACCGC TGTTGCTTCAAACTTTCACCTACTGGCATGATGTCCATCTCAGGGTTTGC GCCCTGGCGCACTCGAGACACAGCTGCTGCCCCCCTCACACTTGCCCCCC CCCCTTGCGCCATCATCACCCTCCACGACCATTCCACCTCTCGAAACGAC GCCGCAGGTGGTGTCCCTCGGCGCAGGCAACGACACCACGTTCTTCCGCC TAGCGCGCGACAGCGCCGCGCCCCGAGGCGGCTACTTCGAGATCGACTTC CCATCCACCATGGAGCGGAAGCTGGCGACGCTCCTGCGATCGCCGCCGCT GCGCCAGCTGGCACCACTCACTCAGACTCAGACTCTCAGTCAATCCGAGT TGCCCCCCACCGGCGCCCCCCCGCGCAAACCTCAACATGTGACGCTCTCC GACGGCGCGTATCGCCTCATAAGCGGGGACCTGCGAGACGCCAACGGGGT GGTGAGGGCGCTGCTCGCGGCCGGTCTCGATCCGCAGGCGCCGACGCTTC TGGTGGCAGAGTGCGTGCTGGTGTACATGGAGCCGGCGGAGTCCGCGGCG CTGCTGGCGGAACTCTCCGGGAACTTTCCGTGCAGGTGTGTATTTTTGGG GGGCTTTCGGACGTGTTGAGGAGTTTGGACCTGATACGTGCAGCTTCTTC AATTTTGTGATGTGACCCTAGTAGGGTAGGTTCACGTTTCAAAAGCAGAT GAGTGCGCGGCGCTGCTGGCGGAACTCTCCGGGAACTTTCCGTGCAGGTG TGTGTTCTGGGGAGATTGGACCGCAGCGCTTGACGTACTTGCACCTTGTT TTTTTTGTGGGCTTCACAGAGTAACAAGTATCGCGAAGTATTTGCTTTGT GATATGACCATAGAAGGCCAGATGTGCGTTTCAAGAGAAGATGTGGCATT GTCGGCTCTTGAATGAGCTGCCGGCACCACTCTCATTCCAGTGTCGTGCA AATGTCGCTTTGTCAGGATGCGCTGCATCCTTCTCACACGCGAATCACCC CCGACGCCAAGTTGAGCAGTGATGCATGATTTGGGTCAGAGTAGGTTTTA GTGTACATGAGGTTCAGGGCAAGATTTACGGTAAGGGTTAGGGTCAGGGT GCTCTGATGACTCATTGGCGACGCAAGGCTCGCCCGGCGCCGACAATCTG CTGATTACGCAAAGTGCATCTCGCGTACGAGATGCTCACCCTGATGACAA GCTTGGCGCATTGGGTGCTCCAACGCAACCTGCACTGGTACAGCTCGTCA ACCCTAACCTTAACCACACTTGACTGATGTAGACCCAGGTCGCGCAGCAT CCTCGTCTTGCGTTGATGTCGCTAGGCTTGACGGGCCTAACCGTAAGCAC TGGCGAGTCACCGGTCAACCAGCGTCCTCCTTGCATGCGAGATGGTCAGT CCCGGCGACAGTTTCGGAGCGGCGATGCGCGACAACATCTGAACTAGAAC TGTACTTCAATACATGCTTCAAAGTGGATACAAGAACTAGTATCACTAGG AGACAGGCGCTACATACTAGCATTGATCTTCTTCTTTTTGACTTCTGGCC CTGCGCACCATGCAGCATTCTCCTCGCATATGAGATGGTCAACCCCGGCG ACAAATTCGGAGCGGTGATGCGCGACAACATCCGATGTTGGATTGCCGCA TATAGACAGGCCTTGCTAGCATTCATCTTTTGACTGTAGGATGTTGCTCT GATGGCCGTGCAGCATCCTCCTGGCGTACGAGATGGTCAACCCCGGCGAC AAATTCGGAGCGGTGATGCGCAACAACATCCGCGCGCGCGGCTGCCGCCT CCCCGGCTTCGACCCCTTCCCCTCCCTCGGCGCGCACGTGGCACGGCTCA ACGCGGCAGGATACAGCAGCGCTCAGGCGTTGGACATGCTGACGGCGTAC GAGAGGGTGTTGGACGCGGCGCAGGTGGCGCGCGCGGCGCGCATAGAGCC GCTGGATGAAGTGGAGGAGTGGACGCTGATCATGGTGAGCGCTGCCACGT GGCATGTAACAGACAGTTACAAACAGTCACATGATGAACATTATTACGTA TGTGTGGCGCGAATAGAGCCGCTGGATGAATTGGAGGAATGGACGCTGAG CGTTGCCACATGGCACGTCCAACAGACAGTTCCAAACAGTTACACTAATG AGGTGGCACGTGTCGAACATACAGTTACATAGCAGTTTCGCTGAGGTGGC GCGCGCAACGCGTATAGAGCCGCTGGACGAACTGGAGGAGTGGACGCTGA TCATGGCAAGTAGATGCACTTAGAGTGCAGATGCATGGCACGCCTAGCCT TACTCCTAACCCTAGTCACGGGCAGATGCGGATATTCCTGGGTCGCGTCA GCAGAGTTTGGTGTATGCGATTGCTGTCCTCGCACACACACAAAATGCGC GTTACGGCGCGCATTGAGCCGCTGGATGAATTGGAGGAGTGGACGCTGAT CATGTTGAGCGCTGACGCGTGGCGCACTGGAGGATCAGTTGCAGAACAGG TACAAAACACGGGTACAAGTTGAAACGTTCCGTGCCTGAGCGCTGCTCAC GCACATACACACAATGCGATCACGCGCGCGGCGCGTATAGAGCCGCTGGA CCAACTGAAGGAGTGGACGCTGATCATGGTGAGCGGTGCCGCGTGGCGCG CGTCCAACAGACAGTTACAAACAGTTACACCAATCAGGTGTTACGCATGT GTCGCGCGCATCGAGCTGCTGGACCAACTGAAGGGTGCAGGCTGATCATG GTGAGCGCTGACGCGTGGCGCGTAGACAGTCAGTTACGAACAGTTACACA GTAAGCATTACGTATGTGTGGCGCGCATTGAGCCGCTTGATGAAGAGGAC AAGTGGACGCTGATCATAGTGAGCGCTGACGCGTGTGCTGCAACTGCAAG GCATGAGTGTCACTGGCGCGTGTGAGTGGGCGAGGGGCGCCGAAACAGGC AGTTACGAATAGATGCGGGAGGATTGCTGATCATGGTTAGTATGTATGGA GCGCTGCCTGCGGCTCAGCTAGTGAAAACGGTGAGGGGTAGGTCTAGGAT GAGGGTGAGGGGTTGAGCTTAAGCTTGCTGTGCAAGGTGTCAAACATACT GACGGACAGGTCGGGAAGTCCCTGTAGCGTGTGTCACCAGGCTCTCCAGC GCCTGTCATCGCCCTTGAGAGGCAGGCGCCTGATCTGGTAATAAAATCAG GACCTGCACACGCACGAACGCGCCTAACCCTAACCCTAACGCTGCTGTAT GCGCTGGAAGGTCGAACGCTGGTCATGGTGAGCGCTGATGCGTAGCGCGC TGGATGAACAGTTACATGGCGGTTACAAAACAGTGGCGAGCAAGGGCAAG AAGTTCCATGTGCCGGAGGGCTGTTCTTCTCGCACATGCACACTAATGCG GTCGCGCATTGCACATGCGGCGCGCAGAGGCGCTGGATGAGCTCGAGGAC CGGACGCTCATCGTGGTGAATGTGGGCGCGTGTTTTGATGTGATGTGATT GATGCCAACCAACAATCACATGAGTTGCCGGTCGGTATCTCTCGCACGTG TCAGCTCGCCAGAAAGGCCAGTATACCCTGTATTAATTGACTGTCTAGCT TGAGGTACCAGTCGATCTCCTGCTTGGCAATCAACGCGCACAGACCAGGG CGCTACGAGTCATTCCTGACCCTGCACCGTCAGCAGTTGCTCAACTGAAC GCCACACTATACCTATATCAACGCGAGCGCACTGACTGACGGCCAATACG TACCTACCCCCATGTGCGTCCGCTTTTCTACAGAGCCACTACTGCCTGGC GCTGGCGGCGCGCGGCGAGCAGGCGGAGCAGTTCCTGCAGAGCTTGAAGC TGCCGGCGCCGCTCGTGAGAACTTGA
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Coding sequence (CDS) from alignment at Contig_82:262200..266675+

>mRNA_10967 ID=mRNA_10967|Name=jgi.p|Trimin1|171429|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1008bp|location=Sequence derived from alignment at Contig_82:262200..266675+ (Tribonema minus UTEX_B_3156 )
ATGCGATCTTCGGCGGACGTCAACGATGCAGCGGTGAAGGGCACGGCGGA
CGACGCCATTACGGGCAAGCTGAGCGCTGTCACTCTCGGATACTTCGATG
ACCCCTTCCTGGTGCACTTCAGCAAGCCAGCGCCCGGCCAGCCAAGCCGC
AGGCCTCCCATAATCAACAGGGGCAACTTTGCCAGGATGGCTTGTGTTGA
CAAGGTGGTCAGGGCGTTCTGCGGCTGCGAGGCACTCAGTGGGGACAAGC
AGCTGCTGCCCCCCTCACACTTGCCCCCCCCCCTTGCGCCATCATCACCC
TCCACGACCATTCCACCTCTCGAAACGACGCCGCAGGTGGTGTCCCTCGG
CGCAGGCAACGACACCACGTTCTTCCGCCTAGCGCGCGACAGCGCCGCGC
CCCGAGGCGGCTACTTCGAGATCGACTTCCCATCCACCATGGAGCGGAAG
CTGGCGACGCTCCTGCGATCGCCGCCGCTGCGCCAGCTGGCACCACTCAC
TCAGACTCAGACTCTCAGTCAATCCGACGGGGACCTGCGAGACGCCAACG
GGGTGGTGAGGGCGCTGCTCGCGGCCGGTCTCGATCCGCAGGCGCCGACG
CTTCTGGTGGCAGAGTGCGTGCTGGTGTACATGGAGCCGGCGGAGTCCGC
GGCGCTGCTGGCGGAACTCTCCGGGAACTTTCCGTGCAGGTCGGTGATGC
GCAACAACATCCGCGCGCGCGGCTGCCGCCTCCCCGGCTTCGACCCCTTC
CCCTCCCTCGGCGCGCACGTGGCACGGCTCAACGCGGCAGGATACAGCAG
CGCTCAGGCGTTGGACATGCTGACGGCGTACGAGAGGGTGTTGGACGCGG
CGCAGGTGGCGCGCGCGGCGCGCATAGAGCCGCTGGATGAAGTGGAGGAG
TGGACGCTGATCATGAGCCACTACTGCCTGGCGCTGGCGGCGCGCGGCGA
GCAGGCGGAGCAGTTCCTGCAGAGCTTGAAGCTGCCGGCGCCGCTCGTGA
GAACTTGA
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