mRNA_10913 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|350745
Unique Name	mRNA_10913
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|350745 vs. uniprot
Match: A0A835YLA0_9STRA (AP2/ERF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLA0_9STRA)

HSP 1 Score: 764 bits (1973), Expect = 1.100e-264
Identity = 750/750 (100.00%), Postives = 750/750 (100.00%), Query Frame = 1

Query:    1 MGKETGYNGVRRDRHRFRAEIGLRDGSSKMTRHSLGCYDTPEAAALRFNEALRQLRPDDLHLLNEVPGYADDAPAAAANXXXXXXXXXXXXXSAHASPRPSQVFSHTAAHPYKGVCRHSRGWQASFTKDKVKLHLGTHDTPIEAALAYNDGIRHLKPDLLHLMNDIPAEEARKYAAGQPYRDKLVAAAAAKLKARLQLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVELAVTAENGAQKRPATTAPHAAKHPKKAWRAQRVDAVVPAEARNGGXXXXXXXXXXXXXXXXXXXXXSSARKRPRPADEALDGAXXXXXXXXXXXXXXQVDVPRHVLVVXXXXXXXXXXXSHRDVAAPAXXXXXXXXSGAHSSXXXXXXXXXXXXXPPQAPALQPPPWATTAGPAXXXXXXXXXXXXXXXXXTDDASDSAQPSGPDVKAATDDAAVGAPPPAQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATASAPATGGDTGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAPAGRTDSGSLMPDDLAHSERAAAAESPPGFGGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMVVSAASSSGGFREYGGVLAAPVAARQHFTSATAAALRQLERRAEKGRAQTALVECLKALDISDDVKLEMIGAIMRA 2250
            MGKETGYNGVRRDRHRFRAEIGLRDGSSKMTRHSLGCYDTPEAAALRFNEALRQLRPDDLHLLNEVPGYADDAPAAAANXXXXXXXXXXXXXSAHASPRPSQVFSHTAAHPYKGVCRHSRGWQASFTKDKVKLHLGTHDTPIEAALAYNDGIRHLKPDLLHLMNDIPAEEARKYAAGQPYRDKLVAAAAAKLKARLQLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVELAVTAENGAQKRPATTAPHAAKHPKKAWRAQRVDAVVPAEARNGGXXXXXXXXXXXXXXXXXXXXXSSARKRPRPADEALDGAXXXXXXXXXXXXXXQVDVPRHVLVVXXXXXXXXXXXSHRDVAAPAXXXXXXXXSGAHSSXXXXXXXXXXXXXPPQAPALQPPPWATTAGPAXXXXXXXXXXXXXXXXXTDDASDSAQPSGPDVKAATDDAAVGAPPPAQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATASAPATGGDTGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAPAGRTDSGSLMPDDLAHSERAAAAESPPGFGGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMVVSAASSSGGFREYGGVLAAPVAARQHFTSATAAALRQLERRAEKGRAQTALVECLKALDISDDVKLEMIGAIMRA
Sbjct:    1 MGKETGYNGVRRDRHRFRAEIGLRDGSSKMTRHSLGCYDTPEAAALRFNEALRQLRPDDLHLLNEVPGYADDAPAAAANXXXXXXXXXXXXXSAHASPRPSQVFSHTAAHPYKGVCRHSRGWQASFTKDKVKLHLGTHDTPIEAALAYNDGIRHLKPDLLHLMNDIPAEEARKYAAGQPYRDKLVAAAAAKLKARLQLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVELAVTAENGAQKRPATTAPHAAKHPKKAWRAQRVDAVVPAEARNGGXXXXXXXXXXXXXXXXXXXXXSSARKRPRPADEALDGAXXXXXXXXXXXXXXQVDVPRHVLVVXXXXXXXXXXXSHRDVAAPAXXXXXXXXSGAHSSXXXXXXXXXXXXXPPQAPALQPPPWATTAGPAXXXXXXXXXXXXXXXXXTDDASDSAQPSGPDVKAATDDAAVGAPPPAQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATASAPATGGDTGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAPAGRTDSGSLMPDDLAHSERAAAAESPPGFGGADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMVVSAASSSGGFREYGGVLAAPVAARQHFTSATAAALRQLERRAEKGRAQTALVECLKALDISDDVKLEMIGAIMRA 750

[Close]

BLAST of jgi.p|Trimin1|350745 vs. uniprot
Match: A0A835YKT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKT6_9STRA)

HSP 1 Score: 136 bits (343), Expect = 5.000e-29
Identity = 94/241 (39.00%), Postives = 120/241 (49.79%), Query Frame = 1

Query:   16 GYNGVRRDRHRFRAEIGLRDGSSKMTRHSLGCYDTPEAAALRFNEALRQLRPDDL------------------------HLLNEVP---GYADDA-----PAAAA---------------NXXXXXXXXXXXXXSAHASPRPSQVFSHTAAHPYKGVCRHSRGWQASFTKDKVKLHLGTHDTPIEAALAYNDGIRHLKPDLLHLMNDIPAEEARKYAAGQPYRDKLVAAAAAKLKARLQLP 597
            GY+GV+   +RFR+ I LRD +  + + +LG +DT E AALR N A+R  RP+DL                        HLLN+VP     AD A     P+AAA               N             S    P        +  H Y G+ R+   + A F +D VKL  GT DTPIEAALAYN+GIRHL+PD  HL+NDIP EEA  YA  QP RD+ VA+AA +L+   + P
Sbjct:  687 GYHGVQPSGNRFRSYIHLRDETGALKQRALGVFDTVEEAALRVNAAVRMFRPNDLQLQVVEVCTSLLLIAVCRPRVPPQHLLNQVPMAMSAADVAAHNGSPSAAATDGADSDVSISSLAENETAYMDDGVSGPGSEAYDPSLQAHVRASPLHNYTGITRNGTKYMAQFNRDGVKLRFGTWDTPIEAALAYNEGIRHLRPDHQHLLNDIPPEEAALYAVSQPRRDQYVASAALRLEEARKRP 927

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|350745 vs. uniprot

BLAST of jgi.p|Trimin1|350745 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A835YLA0_9STRA	1.100e-264	100.00	AP2/ERF domain-containing protein n=1 Tax=Tribonem...	[more]
A0A835YKT6_9STRA	5.000e-29	39.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_70	contig	Contig_70:634357..643259 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|350745\|estExt_Genemark1.C_Ctg_700071
Hectar predicted targeting category	other localisation
TranscriptId	351067
Track	FilteredModels1
ProteinId	350745

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350745	gene_10913	Tribonema minus UTEX_B_3156	gene	Contig_70 634357..643259 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|350745	Trimin1\|350745\|estExt_Genemark1.C_Ctg_700071	Tribonema minus UTEX_B_3156	polypeptide	Contig_70 634830..643259 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_10913_7	exon_10913_7	Tribonema minus UTEX_B_3156	exon	Contig_70 634357..636602 -
exon_10913_6	exon_10913_6	Tribonema minus UTEX_B_3156	exon	Contig_70 637413..637509 -
exon_10913_5	exon_10913_5	Tribonema minus UTEX_B_3156	exon	Contig_70 638361..638437 -
exon_10913_4	exon_10913_4	Tribonema minus UTEX_B_3156	exon	Contig_70 639224..639285 -
exon_10913_3	exon_10913_3	Tribonema minus UTEX_B_3156	exon	Contig_70 640198..640261 -
exon_10913_2	exon_10913_2	Tribonema minus UTEX_B_3156	exon	Contig_70 642144..642237 -
exon_10913_1	exon_10913_1	Tribonema minus UTEX_B_3156	exon	Contig_70 643174..643259 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_10913	UTR3_10913	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_70 634357..634829 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_10913	CDS_10913	Tribonema minus UTEX_B_3156	CDS	Contig_70 643174..643259 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_70:634357..643259-
coding sequence from alignment at Contig_70:634357..643259-

spliced messenger RNA

>mRNA_10913 ID=mRNA_10913|Name=jgi.p|Trimin1|350745|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2726bp|location=Sequence derived from alignment at Contig_70:634357..643259- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGAAAGGAGACCGGGTACAATGGGGTGCGGAGGGACAGGCACAGGTT
CAGGGCGGAGATAGGGCTGCGCGATGGATCATCCAAAATGACGAGACACT
CGTTGGGGTGCTACGACACCCCGGAGGCGGCAGCGCTCAGGTTCAACGAA
GCTCTGCGGCAGCTGCGCCCTGATGACCTGCATCTGCTCAACGAAGTGCC
GGGCTACGCCGATGACGCTCCCGCGGCTGCAGCGAATGGCGCTGCTACAG
CGACCCCCGGCTCTGCCTCAGCGCAGTCTGCACACGCTTCGCCGAGGCCC
AGTCAGGTTTTCAGCCACACAGCTGCGCATCCATACAAGGGAGTGTGCCG
CCACAGCCGCGGCTGGCAGGCGTCATTCACCAAGGACAAGGTGAAGTTGC
ACCTGGGCACGCACGACACGCCCATCGAGGCTGCGCTCGCGTACAACGAC
GGCATACGCCACCTCAAGCCAGATCTCCTGCACCTGATGAACGACATACC
CGCGGAGGAGGCGCGCAAGTACGCCGCGGGACAGCCGTACCGCGACAAGC
TGGTCGCCGCCGCCGCCGCCAAGCTCAAGGCGCGCCTGCAGCTGCCGCCG
CCGACGCCAGCGCTCAGCTCACCATGCGCAGCAGCGGTAGCAGCAGCAGC
GGCGCCGCCGCTGACGGCAGCGGCTCAGCCCGAGCAGCTGGTTTCCGTGC
TGCCGCTGCCGCCGCCGCCGCCACCGGTGGAACTGGCGGTAACTGCTGAG
AACGGCGCTCAGAAACGGCCCGCAACAACTGCGCCTCATGCGGCAAAGCA
CCCCAAGAAGGCGTGGCGCGCGCAACGCGTTGACGCCGTCGTCCCTGCAG
AGGCACGCAACGGCGGCGGCAGCGGCGGCGCTGTGGCGAATGGCGGAAGT
CTGGACGGCGCTGCTGCCGCCATCAACGGCAGCAGCGCGCGCAAGCGCCC
CAGGCCGGCGGACGAGGCGCTTGACGGCGCTGCAATGCAGGCGGCGGCGG
CAGCGGCGGCAGGGGCAGCAGCGCAGGTGGACGTACCGCGGCATGTGCTG
GTGGTGGCATCGAGCGGCGGCGGCGCTGCCGCCGCTGACAGCCATCGCGA
TGTCGCTGCTCCGGCGTCTGCGCCGCCGCCGGCAAGCGCGTCTGGCGCAC
ATTCGTCGGCCGGGTCAGGTGCGTCTGCGCCTGCGCCCGCGGGTGCGCCG
CCACAAGCGCCGGCGCTGCAGCCGCCGCCGTGGGCCACCACTGCGGGGCC
TGCCGCACAACCTCCCAGCTCGGCAATGGCACCTGCTGCTGCTGCTGCGG
CTCGCACGGACGACGCAAGCGACAGCGCTCAGCCATCTGGACCTGACGTG
AAGGCCGCGACCGACGACGCTGCTGTCGGCGCGCCGCCTCCTGCGCAGCT
CGCTGCGCAGCCGCCGCCTCAGCCCGCTGCGCCCCCCGCCACCGCCCCTG
CTGCTGCTGCTGCTGGCGCTCCTCCTGCGGCCGCCGCCGCTGCTGCTGCT
GCTCCGGCGACAGCCAGCGCGCCCGCCACCGGTGGCGACACTGGCAGCAC
TCCTGCGGCGCCACCCAGCAGTGCTGCGCCGCCGCAGCCCGGAAGCGCGG
CGCCTTCAGCTGCTGCCGCTGCCGCTGCTGCTGCGCCACTCGCTCACCGC
GCAAGCGACGCCGGATCAGACGGTCCAATCGACGGCGCACTTCTTACAAT
GGGGCCTGCACCAGGACCCCATGGTTCCGGCAGTGCAGGCTCGAGCACCG
GCAGCGAGGCTGCTGCCGCCGCACACGATGCCCCCGCAGGACGCACGGAC
AGTGGGTCGCTGATGCCAGACGACCTTGCACACTCCGAACGTGCGGCGGC
TGCAGAGTCACCGCCCGGGTTCGGCGGCGCAGACGCCGACGACGATGACA
GCGACAGCACGGTCGCCAGCGCTGACCTGCCGACATCAGCAGCGCTGCGC
GCCGCCGCTGCCGCCGCCACCACTGCCGCTGCCGCCAGCGCCGACGCTGA
CGCGCCGCTGAGCCTGGCCATGGTCGTGTCCGCCGCGTCGTCTTCCGGCG
GCTTTCGCGAGTACGGCGGCGTGCTCGCCGCGCCCGTGGCGGCGCGGCAG
CACTTCACGAGCGCCACCGCGGCGGCGCTGCGGCAGCTCGAGCGGCGCGC
GGAGAAGGGGCGCGCGCAGACGGCGCTCGTGGAGTGCCTCAAGGCGCTCG
ACATCTCCGACGACGTCAAGTTGGAGATGATCGGCGCGATCATGCGCGCA
TGACGCGGCGGCATGGAGGCCGCTTCTGCAATGGCCTTTTGCGCAAGGAG
GCAGTTAGGCGGCAAACGCTGGAGCAGTTCAACTTGCACCGGCTCCGCCA
GGCAAATGGCGCAGACGCCGCAGCCGCCGCAGCGCTTTCGTTTCCGCGCC
CACATTTACGGTTTACATAGCGCAGCGCACGCCGCCAGTGCTGCACGGCA
GCGCCTGAGCGAGATTGAGTGCCGCATCAAGTAGGATACAAAAACAACTG
CCAACGAGTCGTCAGCGCGGGCGCGCGCTGACGGTGGCGGGAACGCGGCA
GCAGGCGGCAGTGCTCAGCCGAGCGTAGCCGACGCACTTGAGATGTCGCG
CAAATGCCTGCACGATGCGTGTACACATACAGCGTGCGTAGCAGGGGGGG
AAGGCGCTCCCTTCCCAACATCATTGTTTGGTACGCCGCCGTGAAAACCC
TCTGGAATGAAAAACCGGTCCAAGCC

protein sequence of jgi.p|Trimin1|350745

>Trimin1|350745|estExt_Genemark1.C_Ctg_700071 ID=Trimin1|350745|estExt_Genemark1.C_Ctg_700071|Name=jgi.p|Trimin1|350745|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=751bp
MGKETGYNGVRRDRHRFRAEIGLRDGSSKMTRHSLGCYDTPEAAALRFNE
ALRQLRPDDLHLLNEVPGYADDAPAAAANGAATATPGSASAQSAHASPRP
SQVFSHTAAHPYKGVCRHSRGWQASFTKDKVKLHLGTHDTPIEAALAYND
GIRHLKPDLLHLMNDIPAEEARKYAAGQPYRDKLVAAAAAKLKARLQLPP
PTPALSSPCAAAVAAAAAPPLTAAAQPEQLVSVLPLPPPPPPVELAVTAE
NGAQKRPATTAPHAAKHPKKAWRAQRVDAVVPAEARNGGGSGGAVANGGS
LDGAAAAINGSSARKRPRPADEALDGAAMQAAAAAAAGAAAQVDVPRHVL
VVASSGGGAAAADSHRDVAAPASAPPPASASGAHSSAGSGASAPAPAGAP
PQAPALQPPPWATTAGPAAQPPSSAMAPAAAAAARTDDASDSAQPSGPDV
KAATDDAAVGAPPPAQLAAQPPPQPAAPPATAPAAAAAGAPPAAAAAAAA
APATASAPATGGDTGSTPAAPPSSAAPPQPGSAAPSAAAAAAAAAPLAHR
ASDAGSDGPIDGALLTMGPAPGPHGSGSAGSSTGSEAAAAAHDAPAGRTD
SGSLMPDDLAHSERAAAAESPPGFGGADADDDDSDSTVASADLPTSAALR
AAAAAATTAAAASADADAPLSLAMVVSAASSSGGFREYGGVLAAPVAARQ
HFTSATAAALRQLERRAEKGRAQTALVECLKALDISDDVKLEMIGAIMRA
*

mRNA from alignment at Contig_70:634357..643259-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_10913 ID=mRNA_10913|Name=jgi.p|Trimin1|350745|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8903bp|location=Sequence derived from alignment at Contig_70:634357..643259- (Tribonema minus UTEX_B_3156 )
ATGGGAAAGGAGACCGGGTACAATGGGGTGCGGAGGGACAGGCACAGGTT
CAGGGCGGAGATAGGGCTGCGCGATGGATCATCCAAGTAAGTCAGCTGCG
TGAGGTGCGATGAAACTCGTTGGTGTGCTTGTGGGAATGGGATGAGAGTT
CATGGAACACGTCTGATGCACGCTCCGTGAAAACTGACAGGTATTCAAAA
TGATGCAGGGGGAGGAAGGCATCATCTTATTGCATGTCACTGTGAACCTT
GCCGCGGATGGCAGTTGCAATGACGGCAAGATGTCGCGCCATCTGTGAGC
GCTGCTTCGTGCGGAACCTTGCCGCCTCAACAACAGTGGCAGAGGTCTCG
CCCGCTATGTTGAATTGGTAACGTGCGCTGGGGCATTTCAGCAGAGGAGG
TCAGGGTGGGCCCTTGTGACACTGTGGTGCGACGTGGCGACCGTTTCAGA
TCGCGTGACGCAACTCCTTTTCAGGGCACACGCGGCGCTGCACTGCTGTG
TACTGCAGCACACGTAGAGTCCATGAGTGTTGCGATGATGCCAGGCTGAC
TGAGTATTCATACTTGGTGTGCGGTGAATCGTGGCAGCGTTGGCAGCTTC
GCTTGCCCACAGCGTCAGCGATGTTCGACGTGCTGCCATTGTGGCGCAGC
TGCTTGTGCATTTCCATGCGCTTTAGGTTGAGATGCCGCTGACATCATGT
CACATTTAGTGTAGTATCACGGCATGTATGCTCTGTAGTGTGCTCATTAT
TCTGATCAGCATTCATGCCAGGCCGTAGGCCCCGTGAGAGACACAGTTCC
CGTTTTGCGACGCAATGATGGACCTGTACCGCGACCACGGTGTACGGGAC
GCGCGCGAGCCACAACTTCAACACTTATTCGAGCTGGCGACGCTCCTGTA
CAGAAGTTTGCAGTCCGGCTTGAACATATGGAGCCCCCGATTTTGCATTG
TACATGGCCAGATGACAGCGCCACGTTGTTTTCCTTGGCTCACTCCTGTC
AACATTCTTGCGCCTTGACCAGAATGACGAGACACTCGTTGGGGTGCTAC
GACACCCCGGAGGCGGCAGCGCTCAGGTTCAACGAAGCTCTGCGGCAGCT
GCGCCCTGATGACCTGGTGAGCCTTCCCTCCTTTTATGCATTCATTTATG
CATGTGATTATGTGTGCATCTATTTATAACAATAGTTGTCATCGAAGCTC
TGCAGCAGCTGCGCCCGGATGATTTTGGTGAGTGCTCCGTCCTTCAAAGC
ATTTATTCATGATGGTGAATATAACAATAGTGATTTGTTGTAGTGCGTTC
TCACCTTCCAGAAGCCGTGTCAACACGTCAGCGCGTTGAAGGCGAGCATG
AAGGCATCAGGGCGCCTGTCACGTCCAACCAGCAGCCGTGCGTCAGCAGA
ATGTGTCCTGGGCACAGGCTGTGTTGCTGCATTGATATGTACTTGCATCC
ACGCCTGGCCAGCTGAAAAGGTCGCCTGTTGGCTGCAGCCCGCGGTTCCT
CACCCGCAACACTCAGGCTAGTGTCCTTGCAGCTGTCAGTGGGCATGAAC
AGCTCAGTATGTGTTCACACTGATCAGTTCCTTGTCCCGCTATGGCCAGA
GCGGTGTGGCAGTGAACCGGGTTGAGCCGTGTGCGCACACTGCCAGCTAA
CACACACACACGCAACCCGACAGCGGATGGTACATTAGTTGAGGTCAAGG
CTGGGGTTGCGTAAACGGCGACTGTTGCAGTTGCAAGCGGGACTTGTGGC
TTGCACTCTGACTTGGGCTCTCATCCTACATGCCTGAAAAGGGTTAAACA
GCCAGACAGTGATTGTTGCAGTTGCAAGTGGGACTCGCGGCTTGCATTCG
ACTTGTACTCCAATCACCCATCCTACATGCCTGAAAAACGTCAAACAGCC
TGAGACAGGGCCTCTGCTTCGCAGTGCAATGCGTGGCTACTGGGGTTAAA
TGCCATAACATAGGCACTGGGCAGACAACAAATGCTAAGACGGGGGGTAC
ATGGAATAAGACCCCCCCCCCATGTGTAAACATGCACACAGTGCCCATCA
TACCTCACTCGAATCGAGTGAGACCCCCATAGACCATGTTTCATGCCAAA
ACAAGCTGAGTCGCATTGTGTACCTAAAGTCGAGGCACCTTGATACACCC
CTACAGTCTGTGGTGTAACTCAACTCGTCAGAGGTTCTACTTCAAGTAAC
CGTTGAAGTTCAAAGTTTCGAAAGTTTGTGGGGTGTGCGGTCTGTCAGAG
GGAGGCTAGCGAGAGGCATCATGGCGGTGGCACTGTTACTGCTCACGATA
TGCGCGGGCTTCTTGCACTGCATGTGCCACTGCTGGCATTGCAGGATGGT
ACCGCAGTAAGAATGAAAGAGCAAACCGCAGGAGAACGTTCACGCACTCC
AAGGGCGACAGCGTGCACAGAGCAATGAGCTCTATCGTTTATCTGACACA
ACTTGAATCTAGCCATCGTCTGGCGTAAAGCTTGGTGCGTTGCGTGTTTG
GACCCCGGCTTACTGCCCATGACCCAGCGCATGAGACGCATCTCGTCGTG
CCGGAGACGCTAAGCCGGGGGGTACATGGTATACGACGGGCTCCCCTAGC
ATCATGCGTCGCATTCGGCCCCAAAAGTTCTAGACGGGGGGGTCTTAATC
GCCATCATATACGGTAGTTCAGGGTTGGGGTGAGGTTAGAATTAGAGTAA
GGGTTAGATTAAGGTTAGGTTAGGGTCAGGATTAAGTTACGATTAGGCCT
CAGCACTGCTGACCTCAGGCCTGAACGCTGCTGTTGCTACCTGCCTAGCG
TGCCCGCGGGCCGCGGCGTCACAGAACTGTAACTGCCATCTGTAACTGGC
GCTGCCCTGACTGACGCTGACGCAGCTATCGGCTTGAGCGCTGCTGCACT
GGCAATTCAACATTCAACTCTTCATCCGTCTATTCATTCACTCAGTCAGT
CATTCATCCATTCATGCATTTCGTTCCCTGCGCTGCTGCGCTGCTCAGCA
TCTGCTCAACGAAGTGCCGGGCTACGCCGATGACGCTCCCGCGGCTGCAG
CGAATGGCGCTGGTAAGTAATTTATAAACAAAAAGCGCAGCGTTGAAAAT
AGTAATCAGTTGATTCATCCATGCTCATACACATTCCATATACATACCGT
ATGCACTTGGCCGATGGCTCGAGCAGCGCGCTCGCAAGATCAAGTTTTAT
GCCTGGACTAGAAGCCCGGCAGTGCTGGGAACTGGCCACTCTGCGGTCTC
ATTGATGGGATGCCGCTGACGCCTGATGAAGCTTGTTTCAGCAAAGTTGT
TGCACAGTGACTTATGTATTGTGTGCCGCAGTCATGTTGTCCCGCACGTC
GCACCTGTACCTCGTACCTGCGGTACACTTCAACTCACATGCAGACCCCA
CCAACTACGCGTCTCATGTCACTTGACTTCAAGTCGAGGTGCTGGCGAGC
GCTGACTTGGTCAGTCATGTTGTCTCACATATCACACTCGCAGCACATAC
CTGCTGTAATATTAAACCTCAAACTTGCGCCGGCCTACCCTGTCATTGTC
GCATAACTTCAAGTTGCAGCGTTGATGAGCGTTGCCCTTGGACTGTTCAG
ACAGCCAGTTGTAATGATCAGTGGCGCATTAGGGTTAGGGTTAGGGTAAC
GTTAGGGTTACCTAACCCTAAAGAGCGATGCGAAAGGCAGCCCCTGGCAG
GGTGTCGCACGCCAATTGCACACATGCGTAGCACGGTCCCTGCAAGAAAC
GACACCTGCACCCGTGTCCTCTCGCACCGCCTTTCTCATGTGCTAATGCC
CCACCCATTCTCCTGCCCTCACCACCTTTCTCGTATGCTAATTTACCACC
CAGCCCTAACCCTAAGCCTAACCCTAAACTCCTGCGTGTGACTCAGCCGC
CCCTCCGGCGACGCCCACAAGCGCAGCTGCTGCAGCTGCAACGCCGCCCG
TTGCGGGTGCTCCGGCGCCGCCAGCTACAGCGACCCCCGGCTCTGCCTCA
GCGCAGTCTGCACACGCTTCGCCGAGGCCCAGTCAGGTGGTTGAACTGCG
TGCGTGCGATTGACCTTTAAAGTGCTGTGGAGCGCGCGGCATGTTGTAAT
TGCCGCTAGCAGGTTGCTGTTGTCGTTGCCGTAGCGTTACCGCCGTGCAG
TCTTTTGAGGAGTGCCGCACTGTCAGTTATGCAGTGTGGTTGACGGCACC
GCATGTTAGGGTTAGGGTTAGGATAAGGGTTAGGGGTAGAGTTACGAGGC
CGCCGGCAGCGCTCAATGCAGCTAAAATGCGCAAGACTTGAGCGCACACC
GCACATCGGCTCTTTTGCTAGCATTTGGAAAGTGAAGCAACACAGTGCAG
CTGCACACCAGATACAGTGTTGCTTTCTCCACCTGTCAGCGGCAGTTGTG
GCGCGCAGACCATGAATTGCGGCTGCAAGGAGCGTCCCTGCTTGGAGTTG
CTACTGCAATGCGGCAGTGCTGTGAGCTGTCGCCCACTGTCTAATACTGT
ACAACGTCAGGGGAAGATATCAAGGTGACCATAGCAACAGAACACCGACG
CCAGTCGTGTGCCACTACTCAGAAGTATAGTGTTGTAGTCTGGTCTCAGG
CATGTGTAATCGCTGTAACCGTCAGTGGGTGATGGCAATGAGCATGCAGT
TGTCCGCACGCTCCGGCACTTGCGCACCAAAGATGCAACGGGCCACACAG
ATGATGCAGACCGTACCTGCGGCTGATGAACGCGCATCTCACGTACGTAC
TTCCATGCATCAACGGCTGCTGGAAAGCGCACAACAAAGACTCTGACCTG
CGGCTGTTCTGCTGCGCCGCAGGTTTTCAGCCACACAGCTGCGCATCCAT
ACAAGGGAGTGTGCCGCCACAGCCGCGGCTGGCAGGCGTCATTCACCAAG
TACGGTGAACTCCTCATGTACTCGTAATGTACTTGTTGTGTACACATTTT
GGTCGTTGGCGTAGCTTGTGTACGCTGCGCTGACTACGTTTTGAATCAAC
CAATAAGTGTTTGCTGCCTGTATCATTTAGGCAACACAATGATGACGTGT
GCTGGGATCTGAGTAGATTACAGAAACTCTGTCGGGCATGAGTTGATTTT
AGTTGATATCGGCGGGTTTGAGTCTGAGTAGGTTGGGCAGTGTCAGCGCT
CGGCAGACCTCATATCTGTCTTTCGTCGGCGAATCATTGCTGTTCTGCGG
CGTGGAGGGCACGGTTCGCTGCGACAACCACTCGCGGATTGCAGATGGTG
CGTGTGTAGGTGCTACGGCAGGAGTCGGGTCTGCAGAACAGTACCTTGCG
CCCACAACTTCAGATGATGTCAGGTGTTTGCTGCCTCGGGCGATGTCCCC
ATTCGTTGTCTGTGCCATACCTATAGCCCTCACACTCCAGTTGGGTGTAC
TTGAACTTCGCGCAGCAGATGCGCAGATCAGCGAGTGCAGTGACGCACAA
ACTCGTCCCCTGCCTACTTCCTAACCCTAACCCCAACCCTGGTTTAGCAA
CTCCACATGTGACCTGTTCCAGGGGTGTCTCGACATTCTGTGCATGGCCG
TGTATTACACCTAGATAGGGGGCAGGCAAAGTTTTAACTCGTTGCATGAT
CCTAACTGATGCCTGTGGTGGTCTATGCATGCAGCAGCTTCACGCTTGAA
GTTTTCAAGACGTCTTTGTTCACAGCTGGCTTGCGTGCGCCATATGTGAC
ACAATTGGTTCACAGTTTCCTACGTGGCTCCTGTCTTCACTTATTTGCAG
GGACAAGGTGAAGTTGCACCTGGGCACGCACGACACGCCCATCGAGGCTG
CGCTCGCGTACAACGACGGCATACGCCACCTCAAGCCAGATCTCCTGGTA
CGTTTTACTTTGCTGTTTTCCCTGCGCTGATTGCGTCACAACTCGCTGAC
ATCATGACACATAGGTAGAGTTCGAGTTGCATACACCACGCAGGGTAGGG
TTAGGGTAAAATGTAGGGTTTACCCTGCTTGGCAACTTCTTCCGACGCCC
AAAGATTGGGGATGAAGACCGGCACAGCGTCTATGTAATGTCTCTAGACA
GTTGCAAACACTGTTGTCGCGCCAATAGCGTCGCCATTGTCGCCATTGTG
ACATGGAAAGTGAAGTTTGACTGCCATGCGCCTCGCACGCTGTTTGGCAA
TCTGTTTCACGGCCCAGCAAATTGGGGATTAAACACGATGTAGTAAGAAT
CGATGTCTGGCGACAGGTGTTCACACTGTCTGCTTGTTGTTCACACGGAA
TTGTTGTGTGCCCTTCAAAAGAAACCCTTTCCGCATGCAGATGGTGGACC
AATGGACCGCATGGCTAATTGCATCGGCTTGATGCTTCTGTAGAGGCGTC
CCCAACAGTTGTCGCTGCTTGTCCCTTTCGTGATGGTCAATGGCGGCAGG
CATCATGTGTGCATCTCTGACGGAGCGTAGTGGGTCGTGCGGAGAAGCCC
GTCCGGCGCGCATTTTCTTCACAATGCGCAAAACATGATGTCTTGAGAGA
CCTTGCCTGCACCAACGCGCGTTTCAGCCCTCCACGACGCTATGCGGAGC
ATCTCAACCGCGTTGCCCGCGCGCAAATTTCATACATACATGCTGCTCAT
TCACCAGCGCGCGCGCTCACCACGCCCTCATCACCACGCGCCGCTGCCGC
ACGGCAGCACCTGATGAACGACATACCCGCGGAGGAGGCGCGCAAGTACG
CCGCGGGACAGCCGTACCGCGACAAGCTGGTCGCCGCCGCCGCCGCCAAG
CTCAAGGCGCGCCTGCAGCTGCCGCCGCCGACGCCAGCGCTCAGCTCACC
ATGCGCAGCAGCGGTAGCAGCAGCAGCGGCGCCGCCGCTGACGGCAGCGG
CTCAGCCCGAGCAGCTGGTTTCCGTGCTGCCGCTGCCGCCGCCGCCGCCA
CCGGTGGAACTGGCGGTAACTGCTGAGAACGGCGCTCAGAAACGGCCCGC
AACAACTGCGCCTCATGCGGCAAAGCACCCCAAGAAGGCGTGGCGCGCGC
AACGCGTTGACGCCGTCGTCCCTGCAGAGGCACGCAACGGCGGCGGCAGC
GGCGGCGCTGTGGCGAATGGCGGAAGTCTGGACGGCGCTGCTGCCGCCAT
CAACGGCAGCAGCGCGCGCAAGCGCCCCAGGCCGGCGGACGAGGCGCTTG
ACGGCGCTGCAATGCAGGCGGCGGCGGCAGCGGCGGCAGGGGCAGCAGCG
CAGGTGGACGTACCGCGGCATGTGCTGGTGGTGGCATCGAGCGGCGGCGG
CGCTGCCGCCGCTGACAGCCATCGCGATGTCGCTGCTCCGGCGTCTGCGC
CGCCGCCGGCAAGCGCGTCTGGCGCACATTCGTCGGCCGGGTCAGGTGCG
TCTGCGCCTGCGCCCGCGGGTGCGCCGCCACAAGCGCCGGCGCTGCAGCC
GCCGCCGTGGGCCACCACTGCGGGGCCTGCCGCACAACCTCCCAGCTCGG
CAATGGCACCTGCTGCTGCTGCTGCGGCTCGCACGGACGACGCAAGCGAC
AGCGCTCAGCCATCTGGACCTGACGTGAAGGCCGCGACCGACGACGCTGC
TGTCGGCGCGCCGCCTCCTGCGCAGCTCGCTGCGCAGCCGCCGCCTCAGC
CCGCTGCGCCCCCCGCCACCGCCCCTGCTGCTGCTGCTGCTGGCGCTCCT
CCTGCGGCCGCCGCCGCTGCTGCTGCTGCTCCGGCGACAGCCAGCGCGCC
CGCCACCGGTGGCGACACTGGCAGCACTCCTGCGGCGCCACCCAGCAGTG
CTGCGCCGCCGCAGCCCGGAAGCGCGGCGCCTTCAGCTGCTGCCGCTGCC
GCTGCTGCTGCGCCACTCGCTCACCGCGCAAGCGACGCCGGATCAGACGG
TCCAATCGACGGCGCACTTCTTACAATGGGGCCTGCACCAGGACCCCATG
GTTCCGGCAGTGCAGGCTCGAGCACCGGCAGCGAGGCTGCTGCCGCCGCA
CACGATGCCCCCGCAGGACGCACGGACAGTGGGTCGCTGATGCCAGACGA
CCTTGCACACTCCGAACGTGCGGCGGCTGCAGAGTCACCGCCCGGGTTCG
GCGGCGCAGACGCCGACGACGATGACAGCGACAGCACGGTCGCCAGCGCT
GACCTGCCGACATCAGCAGCGCTGCGCGCCGCCGCTGCCGCCGCCACCAC
TGCCGCTGCCGCCAGCGCCGACGCTGACGCGCCGCTGAGCCTGGCCATGG
TCGTGTCCGCCGCGTCGTCTTCCGGCGGCTTTCGCGAGTACGGCGGCGTG
CTCGCCGCGCCCGTGGCGGCGCGGCAGCACTTCACGAGCGCCACCGCGGC
GGCGCTGCGGCAGCTCGAGCGGCGCGCGGAGAAGGGGCGCGCGCAGACGG
CGCTCGTGGAGTGCCTCAAGGCGCTCGACATCTCCGACGACGTCAAGTTG
GAGATGATCGGCGCGATCATGCGCGCATGACGCGGCGGCATGGAGGCCGC
TTCTGCAATGGCCTTTTGCGCAAGGAGGCAGTTAGGCGGCAAACGCTGGA
GCAGTTCAACTTGCACCGGCTCCGCCAGGCAAATGGCGCAGACGCCGCAG
CCGCCGCAGCGCTTTCGTTTCCGCGCCCACATTTACGGTTTACATAGCGC
AGCGCACGCCGCCAGTGCTGCACGGCAGCGCCTGAGCGAGATTGAGTGCC
GCATCAAGTAGGATACAAAAACAACTGCCAACGAGTCGTCAGCGCGGGCG
CGCGCTGACGGTGGCGGGAACGCGGCAGCAGGCGGCAGTGCTCAGCCGAG
CGTAGCCGACGCACTTGAGATGTCGCGCAAATGCCTGCACGATGCGTGTA
CACATACAGCGTGCGTAGCAGGGGGGGAAGGCGCTCCCTTCCCAACATCA
TTGTTTGGTACGCCGCCGTGAAAACCCTCTGGAATGAAAAACCGGTCCAA
GCC

Coding sequence (CDS) from alignment at Contig_70:634357..643259-

>mRNA_10913 ID=mRNA_10913|Name=jgi.p|Trimin1|350745|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2253bp|location=Sequence derived from alignment at Contig_70:634357..643259- (Tribonema minus UTEX_B_3156 )
ATGGGAAAGGAGACCGGGTACAATGGGGTGCGGAGGGACAGGCACAGGTT
CAGGGCGGAGATAGGGCTGCGCGATGGATCATCCAAAATGACGAGACACT
CGTTGGGGTGCTACGACACCCCGGAGGCGGCAGCGCTCAGGTTCAACGAA
GCTCTGCGGCAGCTGCGCCCTGATGACCTGCATCTGCTCAACGAAGTGCC
GGGCTACGCCGATGACGCTCCCGCGGCTGCAGCGAATGGCGCTGCTACAG
CGACCCCCGGCTCTGCCTCAGCGCAGTCTGCACACGCTTCGCCGAGGCCC
AGTCAGGTTTTCAGCCACACAGCTGCGCATCCATACAAGGGAGTGTGCCG
CCACAGCCGCGGCTGGCAGGCGTCATTCACCAAGGACAAGGTGAAGTTGC
ACCTGGGCACGCACGACACGCCCATCGAGGCTGCGCTCGCGTACAACGAC
GGCATACGCCACCTCAAGCCAGATCTCCTGCACCTGATGAACGACATACC
CGCGGAGGAGGCGCGCAAGTACGCCGCGGGACAGCCGTACCGCGACAAGC
TGGTCGCCGCCGCCGCCGCCAAGCTCAAGGCGCGCCTGCAGCTGCCGCCG
CCGACGCCAGCGCTCAGCTCACCATGCGCAGCAGCGGTAGCAGCAGCAGC
GGCGCCGCCGCTGACGGCAGCGGCTCAGCCCGAGCAGCTGGTTTCCGTGC
TGCCGCTGCCGCCGCCGCCGCCACCGGTGGAACTGGCGGTAACTGCTGAG
AACGGCGCTCAGAAACGGCCCGCAACAACTGCGCCTCATGCGGCAAAGCA
CCCCAAGAAGGCGTGGCGCGCGCAACGCGTTGACGCCGTCGTCCCTGCAG
AGGCACGCAACGGCGGCGGCAGCGGCGGCGCTGTGGCGAATGGCGGAAGT
CTGGACGGCGCTGCTGCCGCCATCAACGGCAGCAGCGCGCGCAAGCGCCC
CAGGCCGGCGGACGAGGCGCTTGACGGCGCTGCAATGCAGGCGGCGGCGG
CAGCGGCGGCAGGGGCAGCAGCGCAGGTGGACGTACCGCGGCATGTGCTG
GTGGTGGCATCGAGCGGCGGCGGCGCTGCCGCCGCTGACAGCCATCGCGA
TGTCGCTGCTCCGGCGTCTGCGCCGCCGCCGGCAAGCGCGTCTGGCGCAC
ATTCGTCGGCCGGGTCAGGTGCGTCTGCGCCTGCGCCCGCGGGTGCGCCG
CCACAAGCGCCGGCGCTGCAGCCGCCGCCGTGGGCCACCACTGCGGGGCC
TGCCGCACAACCTCCCAGCTCGGCAATGGCACCTGCTGCTGCTGCTGCGG
CTCGCACGGACGACGCAAGCGACAGCGCTCAGCCATCTGGACCTGACGTG
AAGGCCGCGACCGACGACGCTGCTGTCGGCGCGCCGCCTCCTGCGCAGCT
CGCTGCGCAGCCGCCGCCTCAGCCCGCTGCGCCCCCCGCCACCGCCCCTG
CTGCTGCTGCTGCTGGCGCTCCTCCTGCGGCCGCCGCCGCTGCTGCTGCT
GCTCCGGCGACAGCCAGCGCGCCCGCCACCGGTGGCGACACTGGCAGCAC
TCCTGCGGCGCCACCCAGCAGTGCTGCGCCGCCGCAGCCCGGAAGCGCGG
CGCCTTCAGCTGCTGCCGCTGCCGCTGCTGCTGCGCCACTCGCTCACCGC
GCAAGCGACGCCGGATCAGACGGTCCAATCGACGGCGCACTTCTTACAAT
GGGGCCTGCACCAGGACCCCATGGTTCCGGCAGTGCAGGCTCGAGCACCG
GCAGCGAGGCTGCTGCCGCCGCACACGATGCCCCCGCAGGACGCACGGAC
AGTGGGTCGCTGATGCCAGACGACCTTGCACACTCCGAACGTGCGGCGGC
TGCAGAGTCACCGCCCGGGTTCGGCGGCGCAGACGCCGACGACGATGACA
GCGACAGCACGGTCGCCAGCGCTGACCTGCCGACATCAGCAGCGCTGCGC
GCCGCCGCTGCCGCCGCCACCACTGCCGCTGCCGCCAGCGCCGACGCTGA
CGCGCCGCTGAGCCTGGCCATGGTCGTGTCCGCCGCGTCGTCTTCCGGCG
GCTTTCGCGAGTACGGCGGCGTGCTCGCCGCGCCCGTGGCGGCGCGGCAG
CACTTCACGAGCGCCACCGCGGCGGCGCTGCGGCAGCTCGAGCGGCGCGC
GGAGAAGGGGCGCGCGCAGACGGCGCTCGTGGAGTGCCTCAAGGCGCTCG
ACATCTCCGACGACGTCAAGTTGGAGATGATCGGCGCGATCATGCGCGCA
TGA