mRNA_10786 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|351849
Unique Name	mRNA_10786
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A835ZI09_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI09_9STRA)

HSP 1 Score: 1086 bits (2808), Expect = 0.000e+0
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 1

Query:    1 MDHDQQEPRICEQPHLEAQPTGGTPPAEGNVKPLRISKKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPRKRDAQYCGLHQQEVFDAESRIPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSPIAAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQPEHCYIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDKGLRAKGNPPFRAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGVGTDLALRAALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLAGVAIATCCHHCVNLTDYVGRAFAERCGFDKRDFAAIGRLGGWATTFGPEGGGRRPGSSXXXXXAQREGGXXDXXXXXXXXXXNEHSASDSGIGCEGGGAVRTDAERREIGRKSKALIDWGRKEYLEGLGMEAELVYFCDRAFSPENCLLLAWLPGGKMRYCL 1743
            MDHDQQEPRICEQPHLEAQPTGGTPPAEGNVKPLRISKKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPRKRDAQYCGLHQQEVFDAESRIPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSPIAAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQPEHCYIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDKGLRAKGNPPFRAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGVGTDLALRAALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLAGVAIATCCHHCVNLTDYVGRAFAERCGFDKRDFAAIGRLGGWATTFGPEGGGRRPGSSXXXXXAQREGGXXDXXXXXXXXXXNEHSASDSGIGCEGGGAVRTDAERREIGRKSKALIDWGRKEYLEGLGMEAELVYFCDRAFSPENCLLLAWLPGGKMRYCL
Sbjct:    1 MDHDQQEPRICEQPHLEAQPTGGTPPAEGNVKPLRISKKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPRKRDAQYCGLHQQEVFDAESRIPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSPIAAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQPEHCYIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDKGLRAKGNPPFRAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGVGTDLALRAALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLAGVAIATCCHHCVNLTDYVGRAFAERCGFDKRDFAAIGRLGGWATTFGPEGGGRRPGSSXXXXXAQREGGXXDXXXXXXXXXXNEHSASDSGIGCEGGGAVRTDAERREIGRKSKALIDWGRKEYLEGLGMEAELVYFCDRAFSPENCLLLAWLPGGKMRYCL 581

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BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A024UQA3_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQA3_9STRA)

HSP 1 Score: 227 bits (579), Expect = 8.260e-64
Identity = 183/568 (32.22%), Postives = 255/568 (44.89%), Query Frame = 1

Query:   61 TGGTPPAEGNVKPLRISKKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPRKRDAQYCGLHQQEVFDAES---------------RIPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSP-IAAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQPEHCYIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDKGLRAKGNPPFRAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGVGTDLALRA-ALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLAGVAIATCCHHCVNLTDYVGRAFAERCGFDKRDFAAIGRLGGWATTFGPEGGGRRPGSSXXXXXAQREGGXXDXXXXXXXXXXNEHSASDSGIGCEGGGAVRTDAERREIGRKSKALIDWGRKEYLEGLGMEAELVYFCDRAFSPENCLLLAW 1713
            T  T  +  + KPL +S + +RK  K  A +D    G+W  C   + RKNR C+  R   + YCG H   + D E                R+PC +D +H++   +L+ HL IC   K A  + S  FYS+ INSG   AGS  +A   D A     A VD  S P++A +A +    A                 + L A+I+ AY+ +V SI   +L    C  L +   A   +   +RHI QQ+SI+GHM+ + +++P H Y E+GAGR +L LAL   YP S  +L+D A  R   D+ + A  N   RAK+DIR L+  K+     + +V ++KHLCGV TDL+LRA A TL P                                S   A        S F       G+AIA CCHH     DYV   +    GF   +F  +  L GWAT                      +GG                 A +S +G          A+R ++GR+ K L+D GR  YL   G+ AELV++C++  S ENCLLLAW
Sbjct:    3 TETTTTSAASTKPLHVSDRLKRKREKSKAMKD----GEWTQCMFKLKRKNRLCNVARVEGSLYCGNH---IVDEEGVTSQKTKKHKQELCKRVPCTLDPSHTVYLFDLKKHLVICNKLKEAEAMRSLPFYSENINSGTHAAGSDHVAPPVDEALHVDDANVDEHSCPSSAKQASLFQTLAAMD-------------FNSLAAKIKSAYDANVPSIPTQKLDHAACTALLKEKQAAGANHSVLRHIQQQASILGHMEAKHLLRPSHVYCELGAGRAMLSLALTQIYPSSPFVLIDRAGSRGKADQHI-ATENKCTRAKIDIRHLNLAKMEQVANQPLVCLSKHLCGVATDLSLRALANTLPP--------------------------------SEGSAGSVPPPITSHF------VGLAIALCCHHACRWEDYVHPQYFLDMGFTVAEFKLMVSLSGWATC-----------------GMSTDGG-----------------AVESVLGLNR-------ADRTQLGRQCKRLLDMGRVHYLRERGVRAELVHYCEQDESLENCLLLAW 470

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BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A8K1FML3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FML3_PYTOL)

HSP 1 Score: 211 bits (538), Expect = 5.490e-58
Identity = 165/552 (29.89%), Postives = 239/552 (43.30%), Query Frame = 1

Query:  112 KKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPRKRDAQYCGLH------------QQEVFDAESRIPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGP-PLAGSPIAAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQPEHCYIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDKGLR-----AKGNPPFRAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGVGTDLALRAALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLAGVAIATCCHHCVNLTDYVGRAFAERCGFDKRDFAAIGRLGGWATTFGPEGGGRRPGSSXXXXXAQREGGXXDXXXXXXXXXXNEHSASDSGIGCEGGGAVRTDAERREIGRKSKALIDWGRKEYLEGLGMEAELVYFCDRAFSPENCLLLAW 1713
            K+ Q KLA       +  +G+WD C   + RKNR+C+  R   A +CG H            QQ   +  SR+PCP+D +H++ + +L+ HLK+C  T+ A    +  +YS+ INSG   +       AA+V+             PTA  E  +ID  A    A             DL+ R+  AY+  VGSI   +L    C+ L     A       +RHI QQ+SIIGHM+R  ++  +  ++E+GAGRG+L LAL  T+PDS  +L+D A  R   D  +R        +   RAK+DIR L+   +       +V ++KHLCGV TDL+LRA     P          H  G                                    +    G+A+A CCHH     DY    F    GF  ++F  +  +  WAT                    Q  G   +                  GI         T ++R  +GRK K ++D GR +YL+ LG++ +LV++C+   S ENCLLLAW
Sbjct:   19 KRKQEKLA-------AMKSGEWDRCMFRIVRKNRFCNMERINGALFCGNHLPADAQVSSKSSQQFKAELRSRVPCPIDGSHTVYQYDLEKHLKVCNKTRDAEAAKALPYYSENINSGTHAVTTREELKAAEVSIEASDDTEKEHDGPTAQQEQSLIDKLAALDFA-------------DLVKRVNSAYDTCVGSIPTEKLRHSCCDALLTEKTAAGASRAALRHIEQQASIIGHMERAKLLDSKAAFLELGAGRGMLSLALAQTFPDSLYVLIDRAGSRGKADHFIRDNMSDTSAHKVMRAKIDIRHLNLAGMKELVDMPIVGMSKHLCGVATDLSLRAIANTVPVP------ESHPAG----------------------------------VISPAFKGIAVALCCHHACQWEDYSNPEFFLAQGFSAQEFPLLKGMTSWATC-----------------AMQATGDTVEQVL---------------GI---------TKSDRAILGRKIKRILDAGRIDYLKRLGLQTQLVHYCEVDDSVENCLLLAW 469

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BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A2P4X027_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X027_9STRA)

HSP 1 Score: 202 bits (513), Expect = 2.310e-54
Identity = 173/560 (30.89%), Postives = 241/560 (43.04%), Query Frame = 1

Query:  106 ISKKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPRKRDAQYCGLH----------QQEVFDAESR--IPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSPIAAAADVAAPNGSAFVDPA-SDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQPEHC-YIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDK--GLRAKGNPP-------FRAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGVGTDLALRAALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLAGVAIATCCHHCVNLTDYVGRAFAERCGFDKRDFAAIGRLGGWATT-FGPEGGGRRPGSSXXXXXAQREGGXXDXXXXXXXXXXNEHSASDSGIGCEGGGAVRTDAERREIGRKSKALIDWGRKEYLEGLGMEAELVYFCDRAFSPENCLLLAW 1713
            +S+ AQRK  +K A  +++  G WD C   V RKNRYC+  R   + +CG H          + + F A +R  +PCPVDA+H++ + +L  H+ +C   K A  +    +YS  INSG   +        D     G A  D   S P+A ++  +ID        K    D       DL  RI+ AY   VG +   +L    C+ L E           +RHI QQ+SIIGHM++  +++  +  ++E+GAGRG+L LAL   YPDS  +L+D A  R   D+  G   KG+          RAK+DIR L+   +     KRVV ++KHLCGV TDL+LRA     P  +                                          +  A +    G+AIA CCHH     DYV  AF    GF   +F  +  +  W T   G EG                     D          ++ +A                     +GRK K +ID GR  YLE L M+  LV++CD   S ENCLLLAW
Sbjct:   10 LSRDAQRKR-RKQAKAEAKDGGQWDRCMFKVVRKNRYCNISRVPGSLFCGNHLPDSDVAVSKKSQKFKAATRRRVPCPVDASHTVYEYDLAKHVLVCNRVKDADTMKKLPYYSHNINSGTHCSDR-----GDNTTSEGIAEKDEKHSTPSAQEQQGIID--------KLQAID-----FKDLRERIDAAYAACVGELKLEKLHHKCCDQLFEEKKKAGASKSVLRHIEQQASIIGHMEKVRLLEDSNAAFVELGAGRGMLSLALAQMYPDSLYVLIDRAHTRGKADRFIGGDGKGDESAKESSMMLRAKIDIRHLNFAGMQEVLNKRVVCMSKHLCGVATDLSLRAIAQTLPELSNT---------------------------------QVVPLEDTPAAVSSSFQGLAIALCCHHVCAWEDYVNPAFFLAHGFKAEEFELLTSMTSWTTCGMGLEG---------------------DAVQHILDISKDDRAA---------------------LGRKCKRIIDAGRAAYLEQLQMKTRLVHYCDTNDSLENCLLLAW 475

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BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A662WTD2_9STRA (tRNA:m(4)X modification enzyme TRM13 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTD2_9STRA)

HSP 1 Score: 195 bits (495), Expect = 2.170e-51
Identity = 181/598 (30.27%), Postives = 256/598 (42.81%), Query Frame = 1

Query:  106 ISKKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPRKRDAQYCGLHQQEVFDAES------------RIPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGP------PLAGS--PIAAAADVAAPNGSAFVDPASDPTAADEAPVIDA-------------------SAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPL---KEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQ-PEHCYIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDKGLRA---------KGNPPFRAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGVGTDLALRAALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLA----GVAIATCCHHCVNLTDYVGRAFAERCGFDKRDFAAIGRLGGWATTFGPEGGGRRPGSSXXXXXAQREGGXXDXXXXXXXXXXNEHSASDSGIGCEGG------GAVRTDAERREIGRKSKALIDWGRKEYLEGLGMEAELVYFCDRAFSPENCLLLAW 1713
            ++K+AQ+K  +K+A   +   G W+ C   V RKNRYC+  R   +++CG H  E     S            R+PCPVD  H++ + +L  H+ +C   K A  + S  +Y + INSG          GS  P  A  D+     S   +  S PTA  +  +ID                    S+VW +  A          ++L  RI+ +Y+  VG ++  +L    C+ L   K+AA A K  L   RHI QQ+SIIGHM++  ++Q P   ++E+GAGRG+L LAL  T+PDS  +LVD A  R   D+ + +         +     RAK+DIR L+   +     K VV ++KHLCGV TDL+LRA     P                                  SRA             +  ++    G+AIA CCHH     DYV  AF    GF  ++F  +  +  W T                                              G+G EG       G  +TD  R  +GRK K +ID GR  YL  L M+  LV++CD + S ENCLLLAW
Sbjct:   14 MAKEAQKKR-RKEAKAAAMDGGQWERCMFKVARKNRYCNISRVPGSKFCGNHLPEGDQTSSKKSQKFKAACRRRVPCPVDGAHTVYEYDLAKHVLVCNRVKDADVMKSLPYYVENINSGTHCTSKTATTGSLGPTDARPDLEDGAQSEGKEEHSAPTAQQQHGIIDKLVRYCASTRVDDILVGFDLSSVWTVQLAID-------FAELRKRIDISYDACVGDLALEKLHHKCCDQLLVEKKAAGASKSVL---RHIDQQASIIGHMEQVKLLQDPGAAFVELGAGRGMLSLALAQTFPDSLFVLVDRAHTRGKADRFIGSDLKDSATGKQETKTLRAKIDIRHLNFAGMKELTDKSVVCMSKHLCGVATDLSLRAIAQTLPQP--------------------------------SRADTNNVAPAQSAPPSPSISTCFQGLAIALCCHHVCAWEDYVNPAFFLAQGFQPQEFELLTSMTSWTTC---------------------------------------------GMGLEGDAVEHILGISKTD--RAALGRKCKRIIDAGRAAYLNQLQMKTRLVHYCDISDSLENCLLLAW 521

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BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: D7FVJ5_ECTSI (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVJ5_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 1.870e-48
Identity = 146/458 (31.88%), Postives = 207/458 (45.20%), Query Frame = 1

Query:   61 TGGTPPAEGNVKPLRISKKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPR-KRDAQYCGLHQQEVFDAESRIPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSPIAAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQPEHCYIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDKGLRAKGNPPFRAKVDIRDLDAGKLP--LPQG--KRVVIVAKHLCGVGTDLALRAALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLAGVAIATCCHHCVNLTDYVGRAFAERCGFDKRDFAAIGRLGGWATTFGPEGGGRR 1419
            +G   P   +++    +   +R+  +K A   +  TG WD C   V  K RYC+Q R K  A +CG H  E  +   R+PCPVD  H++ +  L  H+KIC      + + +Q +YS+GINSGPPL                                                  +   ++ DL++R+E A+ + VG I    L PPE + L              R +V  +   G     G   P   ++EMGAG+G LG ++   +P SD+ +V+ +  R   +  L        RA++DIRDL+ G LP    +G  + VV VAKHLCGV TDLALRA LTL P      ++RD          +D GG       + + A           AA   + GVAIATCCHH  N  DYVGR F  + GF  RDF A+ R+  W +   P+ G R+
Sbjct:    2 SGNEAPRSKSIEEQTRADSRRRRQERKKAQLGALKTGVWDRCLYRVPGKGRYCAQHRSKHSASFCGTHMGETAEKGKRVPCPVDPNHTVFEQQLSSHVKICNLALQQARMVAQPYYSEGINSGPPL------------------LPGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXLDDAFVVDLLSRVEAAHRDLVGEIPTEVLDPPEVQALH-------------RGLVGPA---GGDNGHGENGPSVLHVEMGAGKGTLGQSIATAFPGSDVTMVERSSVRRKAENRLEGVST---RARIDIRDLNMGGLPSLTAEGDDRPVVAVAKHLCGVATDLALRAMLTLPPRP----ESRD----------ADDGGHVGNGDPTAAPA-----------AATTRVGGVAIATCCHHVCNWRDYVGRDFLTQQGFSARDFEAMRRISAWIS-LEPDAGARK 396

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BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A7S2RS80_9STRA (tRNA:m(4)X modification enzyme TRM13 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS80_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.660e-47
Identity = 166/520 (31.92%), Postives = 217/520 (41.73%), Query Frame = 1

Query:  241 AQYCGLH---QQEVFDAESRIPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSPIAAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSD--LIARIERAYEEHVGSIS-ALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQPEHCYIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDKGLR----------------AKGNPPF-RAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGVGTDLALRAALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSR-FAAAHGLAGVAIATCCHHCVNLTDYVGRAFAER-CGFDKRDFAAIGRLGGWATTFGPEGGGRRPGSSXXXXXAQREGGXXDXXXXXXXXXXNEHSASDSGI-GCEGGGAVRTDAERR-EIGRKSKALIDWGRKEYLEGLGMEAELVYFCDRAFSPENCLLLAWLP 1719
            + YCG+H    +E      R+PCPVD +H+I +  L+ HLK+C   K  S   ++ ++ +G+NSG                      VD   D  AA+                      G + SD  LIA I   Y   VG I    QLSP       E         K M+H  QQSSI+  + RR ++Q    ++E GAGRG+LGLA+    P + ++ V+ +  RN  D  LR                A     F RA+VDIR L+   L   QGK +V VAKHLCGV TDLALR+ LT  P    N   RD                                   SR +     + GV IATCCHHC +  D+  + F E   G  + DF  + R   WA     +   R PG +     A  +G              +   A  + I GC        D E R  IGR  K L D GR  YL  LG EAEL+++C    SPEN L+LAW P
Sbjct:    6 SMYCGVHINSGKESHKGRKRVPCPVDPSHTIFEDQLKAHLKVCPRAKEVSSQEARPYFQRGVNSG---------------------IVD---DKLAAN----------------------GRHRSDEELIALIPELYSAFVGDIQDKFQLSP-------EVTPDPNSSGKHMKHRTQQSSIVSSLARRDLLQDSLVFVEWGAGRGMLGLAIHSVLPSAPLIFVERSGVRNKADAALRREKGATDGAVASATTSANEQTTFSRARVDIRHLNLAGLDT-QGKPMVAVAKHLCGVATDLALRSLLTCPPRPDKN-PGRD----------------------------ARVDRWPSRGYPPCTAVRGVCIATCCHHCCSWQDFTAKGFFEEDLGLGQDDFRRMQRWSSWACNHPSDT--RVPGDA-----AANKGVTAAASAEEEVEHHSLPKAKPADIAGCR-------DVETRYRIGRMCKRLFDMGRVHYLRNLGFEAELIHYCPVDISPENALILAWRP 428

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BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A024UNE5_9STRA (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNE5_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.400e-47
Identity = 144/434 (33.18%), Postives = 200/434 (46.08%), Query Frame = 1

Query:   61 TGGTPPAEGNVKPLRISKKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPRKRDAQYCGLHQQEVFDAES---------------RIPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSP-IAAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQPEHCYIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDKGLRAKGNPPFRAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGVGTDLALRA-ALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLAGVAIATCCHHCVNLTDYV 1311
            T  T  +  + KPL +S + +RK  K  A +D    G+W  C   + RKNR C+  R   + YCG H   + D E                R+PC +D +H++   +L+ HL IC   K A  + S  FYS+ INSG   AGS  +A   D A     A VD  S P++A +A +    A                 + L A+I+ AY+ +V SI   +L    C  L +   A   +   +RHI QQ+SI+GHM+ + +++P H Y E+GAGR +L LAL   YP S  +L+D A  R   D+ + A  N   RAK+DIR L+  K+     + +V ++KHLCGV TDL+LRA A TL P                                S   A        S F       G+AIA CCHH     DYV
Sbjct:    3 TETTTTSAASTKPLHVSDRLKRKREKSKAMKD----GEWTQCMFKLKRKNRLCNVARVEGSLYCGNH---IVDEEGVTSQKTKKHKQELCKRVPCTLDPSHTVYLFDLKKHLVICNKLKEAEAMRSLPFYSENINSGTHAAGSDHVAPPVDEALHVDDANVDEHSCPSSAKQASLFQTLAAMD-------------FNSLAAKIKSAYDANVPSIPTQKLDHAACTALLKEKQAAGANHSVLRHIQQQASILGHMEAKHLLRPSHVYCELGAGRAMLSLALTQIYPSSPFVLIDRAGSRGKADQHI-ATENKCTRAKIDIRHLNLAKMEQVANQPLVCLSKHLCGVATDLSLRALANTLPP--------------------------------SEGSAGSVPPPITSHF------VGLAIALCCHHACRWEDYV 377

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BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: H3GHR1_PHYRM (tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHR1_PHYRM)

HSP 1 Score: 180 bits (456), Expect = 9.980e-47
Identity = 140/448 (31.25%), Postives = 204/448 (45.54%), Query Frame = 1

Query:  106 ISKKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPRKRDAQYCGLH----------QQEVFDAESR--IPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSPIAAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQPEHC-YIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGD-------KGLRAKGNPPFRAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGVGTDLALRAALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLAGVAIATCCHHCVNLTDYVGRAFAERCGFDKRDFAAIGRLGGWAT 1389
            +++ AQRK  +K A  D++    WD C   V RKNR+C+  R   + +CG H          + + F A +R  +PCPVDA+H++ + +L  H+ +C   K A  +    +YS  INSG   +     + A    P G    +  S+P+A ++  +ID       A             DL  RIE AY+  VG +   +L    C+ L E           +RHI QQ+SIIGHM++  ++Q  +  ++E+GAGRG+L LAL   +PDS  +L+D A  R   D       KG     +   RAK+DIR L+   +     K VV ++KHLCGV TDL+LRA     P         + SGG                               S    +    G+AIA CCHH     DYV  +F E  GF  ++F  +  +  W T
Sbjct:   11 LARDAQRKR-RKQAKTDAKNGAQWDRCMFKVVRKNRFCNISRVPGSLFCGNHLPDSDAAVSSKSQKFKAATRRRVPCPVDASHTVYEFDLAKHVLVCNRVKDADAMKKLAYYSHNINSGSHSSVKEEGSTASSEEPAGDKENEH-SEPSAQEQQGIIDKLVAIDFA-------------DLRKRIEAAYDSCVGELLLEKLQHKCCDQLFEEKKKAGASKSVLRHIEQQASIIGHMEQAKLLQDSNAAFVELGAGRGMLSLALAQMFPDSLYVLIDRAHTRGKADRFIGGDNKGDEGAKDTTLRAKIDIRHLNFAGMQEILDKPVVCMSKHLCGVATDLSLRAVAQTLP---------ESSGG---------------------------KETSSEITVSSSFQGLAIALCCHHVCAWEDYVNPSFFEAQGFKPQEFELLTSMTSWTT 407

[Close]

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: G5AFJ3_PHYSP (tRNA:m(4)X modification enzyme TRM13 n=4 Tax=Phytophthora TaxID=4783 RepID=G5AFJ3_PHYSP)

HSP 1 Score: 179 bits (455), Expect = 4.170e-46
Identity = 141/457 (30.85%), Postives = 214/457 (46.83%), Query Frame = 1

Query:  106 ISKKAQRKLAKKDAGQDSQGTGDWDGCRMWVTRKNRYCSQPRKRDAQYCGLH----------QQEVFDAESR--IPCPVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSPIAAAADVAAPNGSAFVDPA------SDPTAADEAPVIDASAVWRMAKASGGDIGGEYLSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIVQQSSIIGHMQRRGMVQPEHC-YIEMGAGRGLLGLALGLTYPDSDILLVDGAKPRNAGDKGLRAKG---------NPPFRAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGVGTDLALRA-ALTLAPAAALNGQARDHSGGGGGSGASDCGGAXXXXXXSGSRAXXXXXXXXSRFAAAHGLAGVAIATCCHHCVNLTDYVGRAFAERCGFDKRDFAAIGRLGGWAT 1389
            + + AQRK  +K A  +++  G WD C   V RKNRYC+  R   + +CG H          + + F A +R  +PCPVDA+H++ + +L  H+ +C   K A  +    +YS  INSG        AA++D A    +A  +        S+P+A ++  +ID        K    D      +DL  RI+ AYE  VG ++  +L    C+ L E           +RHI QQ+SIIGHM++  ++Q  +  ++E+GAGRG+L LAL   +PDS  +L+D A  R   D+ +  +G         +   RAK+DIR L+   +     K +V ++KHLCGV TDL+LRA A TL  + + + +   +S                                      +    G+AIA CCHH     DYV  AF +  GF   +F  +  +  W T
Sbjct:   10 LGRDAQRKR-RKQAKAEAKDGGQWDRCMFKVVRKNRYCNIARVPGSMFCGNHLPDSDAAVSKKSQKFKAATRRRVPCPVDASHTVYEYDLAKHVLVCNRVKDADIMKKLPYYSHNINSGGTHCSDNSAASSDTAEQEVAADKEKXXXXXEHSEPSAQEQQGIID--------KLLAID-----FADLRKRIDAAYESCVGELALEKLHHKCCDQLFEEKKKAGASQSVLRHIEQQTSIIGHMEQVKLLQDSNAAFVELGAGRGMLSLALAQMFPDSLYVLIDRAHTRGKADRFIGGEGKGEEAEKDSSTTLRAKIDIRHLNFAGMEEILNKPIVCMSKHLCGVATDLSLRAIAQTLPDSKSESSEGASNS-------------------------------------VSSSFQGLAIALCCHHVCAWEDYVNPAFFQAQGFKPEEFQLLTSMTSWTT 415

[Close]

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A836C838_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C838_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.270e-93
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 1

Query:    1 RSGNASKLRHLAQHEGRCLSACNKFGESLAHLACRNGDLATLKVIIENGGSLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWPRR 375
            RSGNASKLRHLAQHEGRCLSACNKFGESLAHLACRNGDLATLKVIIENGGSLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWPRR
Sbjct:    1 RSGNASKLRHLAQHEGRCLSACNKFGESLAHLACRNGDLATLKVIIENGGSLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWPRR 125

[Close]

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A835ZG28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG28_9STRA)

HSP 1 Score: 172 bits (437), Expect = 3.160e-53
Identity = 75/125 (60.00%), Postives = 91/125 (72.80%), Query Frame = 1

Query:    1 RSGNASKLRHLAQHEGRCLSACNKFGESLAHLACRNGDLATLKVIIENGGSLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWPRR 375
            R+G+  +L  L + EGR LSACNKFGESLAHLACR G    +  I+ +GGSLT+CDDL R+P H   W   P+WD+++ HL+AD  LL+T D RGWTPLRY+KRAN  AWR FLD VKD YWP R
Sbjct:    6 RNGSVQELLRLVEEEGRTLSACNKFGESLAHLACRKGSADVVATILRHGGSLTRCDDLGRVPAHDTCWESRPRWDIVQLHLEADAALLLTRDARGWTPLRYVKRANWAAWRAFLDAVKDRYWPAR 130

[Close]

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A836CA41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA41_9STRA)

HSP 1 Score: 118 bits (296), Expect = 8.740e-32
Identity = 59/125 (47.20%), Postives = 78/125 (62.40%), Query Frame = 1

Query:    1 RSGNASKLRHLAQHEGRCLSACNKFGESLAHLACRNGDLATLKVIIENGG--SLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWP 369
            R  +   LR L   EG  ++ACNKF ESL H+A R+G+ A ++ +I+  G   LT CDD  R PLH A WA  P +D++   LD D ++L+  D RG+TPL Y+KR   GAW  F+D VKD YWP
Sbjct:   13 RQADLDALRML-HAEGHGMNACNKFAESLVHMAGRSGNCAVMEFLIDCTGPEGLTICDDYGRTPLHDACWATEPCFDLVSFILDHDSSMLMVVDRRGYTPLSYVKRDQWGAWHAFIDAVKDKYWP 136

[Close]

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A6H5JAC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAC0_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 1.040e-25
Identity = 62/183 (33.88%), Postives = 83/183 (45.36%), Query Frame = 1

Query:    1 RSGNASKLRHLAQHEGRCLSACNKFGESLAHLACRNGDLATLKVIIENGGSLTQCDDLQRLPLHWAAWADAPQWDVIRAHLD------------------------------------------------------------ADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWP 369
            R+G+   L+  A + GR + ACNKFGES+ H+ACR G+L  L  ++ NGGSLT CDDL R PLH   WA  P++D++R  L+                                                             D  +L+ TD RG +PLRY+K  +  AWR FLD V D +WP
Sbjct:  187 RTGDMEGLQR-AVNAGRRMDACNKFGESVVHVACRRGNLPLLLFLVANGGSLTACDDLGRFPLHEVCWAAQPRFDIVRVFLEHERETNXXXXXXXXXXXXXXXATTVSGAXXXXSDGESTXXXXXXXXXXXXXXXXXXXNIVVDLNMLLVTDKRGCSPLRYVKEESWPAWRQFLDEVVDEFWP 368

[Close]

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A835ZH90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH90_9STRA)

HSP 1 Score: 103 bits (256), Expect = 2.750e-25
Identity = 53/126 (42.06%), Postives = 74/126 (58.73%), Query Frame = 1

Query:    1 RSGNASKLRHLAQHEGRC-LSACNKFGESLAHLACRNGDLATLKVIIENGG--SLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWP 369
            R+G+   LR +  H   C ++ACNKF ES+ H+A R G    ++ +IE  G  SL   DD  R PLH A W   P +D++   LD +  +L+  D RG+TPL Y+K+   GAW  F+D +KD YWP
Sbjct:   50 RAGDLDTLREM--HAAGCSMNACNKFAESVVHMAARIGAREVMEFMIECTGVESLAISDDYGRTPLHDACWTSEPFFDMVTFILDHEVEMLLVKDKRGFTPLLYVKKELWGAWHTFIDAIKDKYWP 173

[Close]

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A7S2RMJ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMJ8_9STRA)

HSP 1 Score: 104 bits (259), Expect = 9.230e-24
Identity = 48/111 (43.24%), Postives = 67/111 (60.36%), Query Frame = 1

Query:   43 EGRCLSACNKFGESLAHLACRNGDLATLKVIIENGGSLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWPRR 375
            EGR ++ACNK+GES+ H+ACR GD   +  ++E GG L   DD  R PLH A W   P  DV+   L+ +  LL   D RG++PL Y++R ++  W  F D +KD +W  R
Sbjct:  342 EGRSMNACNKYGESVMHMACRRGDGKLVSFMVELGGLLEITDDYGRTPLHDACWTPEPCLDVVMFLLNKNLRLLHLIDKRGFSPLAYVRREHYDVWTSFFDSMKDTWWSPR 452

[Close]

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: D8LCH5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCH5_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 3.240e-23
Identity = 48/108 (44.44%), Postives = 58/108 (53.70%), Query Frame = 1

Query:   46 GRCLSACNKFGESLAHLACRNGDLATLKVIIENGGSLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWP 369
            GR + ACNKFGES+ H+ACR G+L  L  ++ NGGSLT CDDL R PLH                             RG +PLRY+K  +  AWR FLD V D +WP
Sbjct:   28 GRRMDACNKFGESVVHVACRRGNLPLLLFLVANGGSLTACDDLGRFPLHE----------------------------RGCSPLRYVKEESWPAWRQFLDEVVDEFWP 107

[Close]

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A836CH78_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH78_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 7.350e-23
Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = 1

Query:    1 RSGNASKLRHLAQHEGRCLSACNKFGESLAHLACRNGDLATLKVIIENGGSLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWP 369
            R+ + + LR + +  GRC+SACN+FGES+ H A R G  A +  ++E+G     CDD  R  LH A W   P++DV+   ++AD  LL   D RG  PL+Y +  +   W  F    K  YWP
Sbjct:    6 RADDVAALRAM-RDAGRCMSACNRFGESILHTAARRGSRAVVAFLLESGAPPGACDDCGRNALHQALWTAEPRFDVVTLLVNADVRLLRCVDKRGAPPLQYARPEHWELWCRFFHSKKHLYWP 127

[Close]

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A7S2DD81_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DD81_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 8.400e-22
Identity = 45/107 (42.06%), Postives = 65/107 (60.75%), Query Frame = 1

Query:   46 GRCLSACNKFGESLAHLACRNGDLATLKVIIENGGSLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYW 366
            G  ++ACNKFGES+ H+ACR G+   L+ ++ +G +L+  DD  R P+H A W   P +DV+   L+ D  LL   D RG TPL Y++  ++  W  FLD  KD +W
Sbjct:  193 GHHVNACNKFGESIIHIACRRGNFKVLEQLVSHGATLSISDDYGRTPMHDACWNAEPCFDVVALLLNRDLELLRVLDKRGATPLSYVRPEHYAIWCAFLDYQKDVWW 299

[Close]

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Match: A0A7S1XYJ1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYJ1_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.290e-21
Identity = 45/125 (36.00%), Postives = 67/125 (53.60%), Query Frame = 1

Query:    1 RSGNASKLRHLAQHEGRCLSACNKFGESLAHLACRNGDLATLKVIIENGGSLTQCDDLQRLPLHWAAWADAPQWDVIRAHLDADDTLLVTTDLRGWTPLRYIKRANHGAWRDFLDGVKDHYWPRR 375
            R G+  ++    + +GR  + CN+FGES+ H+A RNG    ++V++++G S+   DD+ R PLH A W       + R  L AD  L+   D RG TPL Y+       W+ FL  + D  WP R
Sbjct:  147 REGDVREVEKFLKEQGRSANTCNRFGESILHMAARNGHTDVVEVLLKHGASVWAVDDMNRTPLHDACWNPMSDLQIPRMLLSADPELIRARDQRGNTPLGYVNLDKEETWKCFLVSMVDICWPVR 271

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|351849 vs. uniprot
BLAST of jgi.p|Trimin1|351849 vs. uniprot

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZI09_9STRA	0.000e+0	100.00	tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Tribo...	[more]
A0A024UQA3_9STRA	8.260e-64	32.22	tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Aphan...	[more]
A0A8K1FML3_PYTOL	5.490e-58	29.89	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A2P4X027_9STRA	2.310e-54	30.89	tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Phyto...	[more]
A0A662WTD2_9STRA	2.170e-51	30.27	tRNA:m(4)X modification enzyme TRM13 n=2 Tax=Notho...	[more]
D7FVJ5_ECTSI	1.870e-48	31.88	tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Ectoc...	[more]
A0A7S2RS80_9STRA	1.660e-47	31.92	tRNA:m(4)X modification enzyme TRM13 (Fragment) n=...	[more]
A0A024UNE5_9STRA	2.400e-47	33.18	tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Aphan...	[more]
H3GHR1_PHYRM	9.980e-47	31.25	tRNA:m(4)X modification enzyme TRM13 n=1 Tax=Phyto...	[more]
G5AFJ3_PHYSP	4.170e-46	30.85	tRNA:m(4)X modification enzyme TRM13 n=4 Tax=Phyto...	[more]

Pages

BLAST of jgi.p|Trimin1|351849 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836C838_9STRA	2.270e-93	100.00	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A835ZG28_9STRA	3.160e-53	60.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CA41_9STRA	8.740e-32	47.20	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A6H5JAC0_9PHAE	1.040e-25	33.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835ZH90_9STRA	2.750e-25	42.06	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2RMJ8_9STRA	9.230e-24	43.24	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
D8LCH5_ECTSI	3.240e-23	44.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CH78_9STRA	7.350e-23	39.02	Ankyrin repeat-containing domain protein (Fragment...	[more]
A0A7S2DD81_9STRA	8.400e-22	42.06	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S1XYJ1_9STRA	2.290e-21	36.00	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_101	contig	Contig_101:127982..131081 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|351849\|estExt_Genemark1.C_Ctg_1010018
BRITE	ko00000,ko01000,ko03016
KEGG ko	ko:K15446
EC	2.1.1.225
GOs	GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0006950,GO:0006970,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008175,GO:0009451,GO:0009628,GO:0009651,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0071704,GO:0090304,GO:0106050,GO:0140098,GO:0140101,GO:1901360
Preferred name	TRMT13
Description	tRNA methylation
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	KOG2811@1\|root,KOG2811@2759\|Eukaryota
Evalue	7.77e-65
Seed ortholog	157072.XP_008863916.1
Hectar predicted targeting category	other localisation
TranscriptId	352171
Track	FilteredModels1
ProteinId	351849

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351849	gene_10786	Tribonema minus UTEX_B_3156	gene	Contig_101 127982..131081 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_10786_1	exon_10786_1	Tribonema minus UTEX_B_3156	exon	Contig_101 127982..128810 +
exon_10786_2	exon_10786_2	Tribonema minus UTEX_B_3156	exon	Contig_101 129193..130085 +
exon_10786_3	exon_10786_3	Tribonema minus UTEX_B_3156	exon	Contig_101 130933..131081 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_10786	CDS_10786	Tribonema minus UTEX_B_3156	CDS	Contig_101 127982..128810 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_10786	UTR3_10786	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_101 130957..131081 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|351849	Trimin1\|351849\|estExt_Genemark1.C_Ctg_1010018	Tribonema minus UTEX_B_3156	polypeptide	Contig_101 127982..130956 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_101:127982..131081+
coding sequence from alignment at Contig_101:127982..131081+

spliced messenger RNA

>mRNA_10786 ID=mRNA_10786|Name=jgi.p|Trimin1|351849|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1871bp|location=Sequence derived from alignment at Contig_101:127982..131081+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGATCACGATCAGCAGGAGCCACGAATCTGTGAGCAGCCTCACCTAGA
GGCACAGCCAACTGGTGGTACACCACCAGCCGAAGGCAACGTCAAACCCC
TGCGGATCAGCAAGAAGGCTCAGAGAAAGCTGGCCAAAAAGGACGCAGGG
CAGGACTCTCAGGGCACCGGCGACTGGGATGGCTGCAGAATGTGGGTCAC
CAGGAAAAACCGCTACTGCAGCCAGCCCAGGAAGCGCGACGCGCAGTACT
GTGGCCTGCACCAGCAGGAAGTCTTCGATGCAGAGTCTAGAATTCCTTGC
CCGGTCGACGCAACCCACAGCATCGACAAGGCCAACCTCCAATGGCACCT
GAAGATCTGTACCTTTACGAAAACAGCGAGTGATGTTGCTTCCCAGGTCT
TCTACAGCAAGGGCATCAACAGCGGCCCTCCACTAGCAGGCTCACCGATA
GCAGCCGCAGCAGATGTTGCTGCTCCAAATGGCTCTGCTTTTGTGGATCC
TGCCTCCGACCCTACTGCAGCAGACGAAGCCCCAGTTATCGATGCGTCTG
CGGTGTGGCGAATGGCCAAAGCCAGCGGCGGCGACATTGGCGGCGAATAC
CTCTCCGACCTGATAGCGAGAATCGAGCGCGCCTATGAGGAGCACGTTGG
CAGTATCTCTGCACTTCAACTCAGCCCGCCGGAGTGTGAGCCACTGAAGG
AGGCTGCGGACGCGGTGAAGATGGACCTCAAGCGCATGCGCCACATAGTG
CAGCAGTCCAGCATCATCGGGCACATGCAGCGGAGGGGGATGGTGCAGCC
GGAGCACTGCTACATTGAGATGGGCGCAGGCCGCGGACTCCTGGGCCTCG
CCCTGGGCCTCACCTACCCCGACTCCGACATCCTCCTTGTGGATGGCGCC
AAGCCACGTAACGCCGGCGACAAGGGGCTGCGCGCTAAAGGCAACCCCCC
CTTCCGCGCAAAAGTCGACATCCGAGACCTTGACGCTGGCAAGCTGCCGC
TGCCGCAGGGCAAGCGCGTCGTCATCGTGGCCAAGCACCTGTGTGGCGTA
GGAACAGATCTTGCGCTGCGCGCCGCGCTTACGCTGGCGCCTGCAGCAGC
GCTCAACGGCCAAGCGAGGGACCACAGCGGCGGCGGCGGCGGCAGCGGCG
CCAGTGATTGCGGCGGCGCCAGCAATTGCGGCGGCGGCAGCGGCAGCCGC
GCCAGTGATTGCGGCAGCGGCAGCGGCAGCAGATTTGCGGCAGCGCACGG
TCTCGCGGGCGTCGCGATAGCCACATGCTGCCACCACTGCGTCAACCTCA
CGGACTACGTGGGGCGCGCGTTTGCTGAGCGCTGCGGCTTTGACAAGCGC
GATTTCGCCGCCATTGGCCGACTCGGCGGCTGGGCCACTACATTTGGCCC
GGAAGGTGGCGGTCGCAGGCCTGGCAGCAGCAGCGGCGGCGGCGCTGCGC
AGCGCGAAGGTGGCGGTGGCGATGGCGATGGCGATGGCGATGGCGATGGC
GGCAATGAGCACAGCGCGAGCGATAGCGGCATAGGGTGTGAGGGGGGGGG
GGCTGTGCGTACCGACGCTGAGCGGCGAGAGATTGGTCGCAAGTCTAAGG
CGCTCATTGACTGGGGGCGCAAGGAGTATTTGGAAGGCCTGGGTATGGAG
GCGGAGCTGGTGTACTTTTGCGACCGCGCGTTTTCCCCCGAAAACTGCCT
GCTGCTGGCGTGGTTGCCAGGTGGCAAGATGCGCTACTGCCTGTGATGGT
GTGCCAGATGCCTGTTGTATGTTGCAGCCTGGCGATCATGTGTCGACACT
ATGTGTCTCAGCGCGATTGCTACAGCAGCACTCAGTCTACGAGCGGTGCA
GCACCAGCAGCGGCAGCGGCG

protein sequence of jgi.p|Trimin1|351849

>Trimin1|351849|estExt_Genemark1.C_Ctg_1010018 ID=Trimin1|351849|estExt_Genemark1.C_Ctg_1010018|Name=jgi.p|Trimin1|351849|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=582bp
MDHDQQEPRICEQPHLEAQPTGGTPPAEGNVKPLRISKKAQRKLAKKDAG
QDSQGTGDWDGCRMWVTRKNRYCSQPRKRDAQYCGLHQQEVFDAESRIPC
PVDATHSIDKANLQWHLKICTFTKTASDVASQVFYSKGINSGPPLAGSPI
AAAADVAAPNGSAFVDPASDPTAADEAPVIDASAVWRMAKASGGDIGGEY
LSDLIARIERAYEEHVGSISALQLSPPECEPLKEAADAVKMDLKRMRHIV
QQSSIIGHMQRRGMVQPEHCYIEMGAGRGLLGLALGLTYPDSDILLVDGA
KPRNAGDKGLRAKGNPPFRAKVDIRDLDAGKLPLPQGKRVVIVAKHLCGV
GTDLALRAALTLAPAAALNGQARDHSGGGGGSGASDCGGASNCGGGSGSR
ASDCGSGSGSRFAAAHGLAGVAIATCCHHCVNLTDYVGRAFAERCGFDKR
DFAAIGRLGGWATTFGPEGGGRRPGSSSGGGAAQREGGGGDGDGDGDGDG
GNEHSASDSGIGCEGGGAVRTDAERREIGRKSKALIDWGRKEYLEGLGME
AELVYFCDRAFSPENCLLLAWLPGGKMRYCL*

mRNA from alignment at Contig_101:127982..131081+

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_10786 ID=mRNA_10786|Name=jgi.p|Trimin1|351849|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3100bp|location=Sequence derived from alignment at Contig_101:127982..131081+ (Tribonema minus UTEX_B_3156 )
ATGGATCACGATCAGCAGGAGCCACGAATCTGTGAGCAGCCTCACCTAGA
GGCACAGCCAACTGGTGGTACACCACCAGCCGAAGGCAACGTCAAACCCC
TGCGGATCAGCAAGAAGGCTCAGAGAAAGCTGGCCAAAAAGGACGCAGGG
CAGGACTCTCAGGGCACCGGCGACTGGGATGGCTGCAGAATGTGGGTCAC
CAGGAAAAACCGCTACTGCAGCCAGCCCAGGAAGCGCGACGCGCAGTACT
GTGGCCTGCACCAGCAGGAAGTCTTCGATGCAGAGTCTAGAATTCCTTGC
CCGGTCGACGCAACCCACAGCATCGACAAGGCCAACCTCCAATGGCACCT
GAAGATCTGTACCTTTACGAAAACAGCGAGTGATGTTGCTTCCCAGGTCT
TCTACAGCAAGGGCATCAACAGCGGCCCTCCACTAGCAGGCTCACCGATA
GCAGCCGCAGCAGATGTTGCTGCTCCAAATGGCTCTGCTTTTGTGGATCC
TGCCTCCGACCCTACTGCAGCAGACGAAGCCCCAGTTATCGATGCGTCTG
CGGTGTGGCGAATGGCCAAAGCCAGCGGCGGCGACATTGGCGGCGAATAC
CTCTCCGACCTGATAGCGAGAATCGAGCGCGCCTATGAGGAGCACGTTGG
CAGTATCTCTGCACTTCAACTCAGCCCGCCGGAGTGTGAGCCACTGAAGG
AGGCTGCGGACGCGGTGAAGATGGACCTCAAGCGCATGCGCCACATAGTG
CAGCAGTCCAGCATCATCGGGCACATGCAGCGGAGGGGGATGGTGCAGCC
GGAGCACTGCTACATTGAGATGGGCGCAGGTGAGACTGACTGCTGTCCTC
ATGAGGTGGTATGAGTTTCGTCTGCTGTTGTACTCAATGCTTGGACTTCC
ATGCAACTGTGCCAGTCTTGCTGGGCGCTCCTTGGCCCAGTCGCACAGCT
TCAGCGGTAGCCATGACATAATTAGATTACCCCATTCTTTATGTTGCTGC
ATAAGCACGCTCAGTTGGCGCGCTCACACCAGACTGTGAATCATTTCAGC
AGTAACATGCTGCACTGCTCTACGTGCAGAGCACTGCTTGAGTCGCACAC
CCGACTCCCTTCCGCAGTCACCAGCATGATGTCAGTCATATGTTGAACGC
ATAACACGCACCTATACCTACCCATACCCCCTATGTGCATACCCCAATGC
TCTCTTCAAAGGCCGCGGACTCCTGGGCCTCGCCCTGGGCCTCACCTACC
CCGACTCCGACATCCTCCTTGTGGATGGCGCCAAGCCACGTAACGCCGGC
GACAAGGGGCTGCGCGCTAAAGGCAACCCCCCCTTCCGCGCAAAAGTCGA
CATCCGAGACCTTGACGCTGGCAAGCTGCCGCTGCCGCAGGGCAAGCGCG
TCGTCATCGTGGCCAAGCACCTGTGTGGCGTAGGAACAGATCTTGCGCTG
CGCGCCGCGCTTACGCTGGCGCCTGCAGCAGCGCTCAACGGCCAAGCGAG
GGACCACAGCGGCGGCGGCGGCGGCAGCGGCGCCAGTGATTGCGGCGGCG
CCAGCAATTGCGGCGGCGGCAGCGGCAGCCGCGCCAGTGATTGCGGCAGC
GGCAGCGGCAGCAGATTTGCGGCAGCGCACGGTCTCGCGGGCGTCGCGAT
AGCCACATGCTGCCACCACTGCGTCAACCTCACGGACTACGTGGGGCGCG
CGTTTGCTGAGCGCTGCGGCTTTGACAAGCGCGATTTCGCCGCCATTGGC
CGACTCGGCGGCTGGGCCACTACATTTGGCCCGGAAGGTGGCGGTCGCAG
GCCTGGCAGCAGCAGCGGCGGCGGCGCTGCGCAGCGCGAAGGTGGCGGTG
GCGATGGCGATGGCGATGGCGATGGCGATGGCGGCAATGAGCACAGCGCG
AGCGATAGCGGCATAGGGTGTGAGGGGGGGGGGGCTGTGCGTACCGACGC
TGAGCGGCGAGAGATTGGTCGCAAGTCTAAGGCGCTCATTGACTGGGGGC
GCAAGGAGTATTTGGAAGGCCTGGGTATGGAGGCGGAGCTGGTGTACTTT
TGCGACCGCGCGTTTTCCCCCGAAAACTGCCTGCTGCTGGCGTGGTTGCC
AGGTGTGAGCCCCGAACATTGCGGCAGCGGCACTGCTACCGCTTCATGTG
GCTCTTGAGATAATGATATGGTAATATCATTTAAACCATGTGCTGTATTG
GTATTTGTTTCTTCAAGATGGTGTTGAAGTGCTGCATTGCCTGCTGCTGC
GAGAAGGCATCAGGCAGTAAACGGCCGCTGGCACTATGGTTCTGCTGGCA
CCACAATGGTTGACAACTTCAACGTACATGTGTAGGGTGCATGTGTGCTG
TGCTCAATTCTCATTTGCGCAGCAATGACTCATTGCGATGCACACCGTAG
ACCTGGAACTCCAGAGCTGTGAGAGCCCCCTGAGAGATCAGCGCGGGTGA
CGACACTTAATGTCGAACAGGTATCAAGATGCGTTGCATCACTTCCATTC
AGGTACCGGGATGCGTTGCATTGGCAATGCCTGGGCACACAGTCGTGAAT
GTGGCGTAGTGACATTGCAAGCATAAGGAAGCAATGGCAGCAGCTGTACC
TGTTTCCCTTGCAATCGTTGCTGTGCTATTTCTCAATGGTCTGCATGCAT
AGCAACAGCTCTACGGCATCAAGCAACTGTGCATCTTCGACCAATAATGC
ATGCGGCAGTGCTGGCTTTCTGACGCGCACACGCTCATTGCACCATGCAA
GCTGGGGGAGCGGAGCACCAGGATGAAAAACATTCATTCCAGTACAAATA
CAATCGCGTAGTCATTACAGTTGATGTGTGTTGCGCAAAGCGCCTCTGTA
TGCAGCGCTGCCATATGTGCCTTGTACGACTGCGCACAATGAGGATCATG
TGCGAAGAATATATCCTCCCTGTTGCAAAAACTGCTGTAAGCGCGCCTCA
GGGCAAGATGCGCTACTGCCTGTGATGGTGTGCCAGATGCCTGTTGTATG
TTGCAGCCTGGCGATCATGTGTCGACACTATGTGTCTCAGCGCGATTGCT
ACAGCAGCACTCAGTCTACGAGCGGTGCAGCACCAGCAGCGGCAGCGGCG

Coding sequence (CDS) from alignment at Contig_101:127982..131081+

>mRNA_10786 ID=mRNA_10786|Name=jgi.p|Trimin1|351849|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1746bp|location=Sequence derived from alignment at Contig_101:127982..131081+ (Tribonema minus UTEX_B_3156 )
ATGGATCACGATCAGCAGGAGCCACGAATCTGTGAGCAGCCTCACCTAGA
GGCACAGCCAACTGGTGGTACACCACCAGCCGAAGGCAACGTCAAACCCC
TGCGGATCAGCAAGAAGGCTCAGAGAAAGCTGGCCAAAAAGGACGCAGGG
CAGGACTCTCAGGGCACCGGCGACTGGGATGGCTGCAGAATGTGGGTCAC
CAGGAAAAACCGCTACTGCAGCCAGCCCAGGAAGCGCGACGCGCAGTACT
GTGGCCTGCACCAGCAGGAAGTCTTCGATGCAGAGTCTAGAATTCCTTGC
CCGGTCGACGCAACCCACAGCATCGACAAGGCCAACCTCCAATGGCACCT
GAAGATCTGTACCTTTACGAAAACAGCGAGTGATGTTGCTTCCCAGGTCT
TCTACAGCAAGGGCATCAACAGCGGCCCTCCACTAGCAGGCTCACCGATA
GCAGCCGCAGCAGATGTTGCTGCTCCAAATGGCTCTGCTTTTGTGGATCC
TGCCTCCGACCCTACTGCAGCAGACGAAGCCCCAGTTATCGATGCGTCTG
CGGTGTGGCGAATGGCCAAAGCCAGCGGCGGCGACATTGGCGGCGAATAC
CTCTCCGACCTGATAGCGAGAATCGAGCGCGCCTATGAGGAGCACGTTGG
CAGTATCTCTGCACTTCAACTCAGCCCGCCGGAGTGTGAGCCACTGAAGG
AGGCTGCGGACGCGGTGAAGATGGACCTCAAGCGCATGCGCCACATAGTG
CAGCAGTCCAGCATCATCGGGCACATGCAGCGGAGGGGGATGGTGCAGCC
GGAGCACTGCTACATTGAGATGGGCGCAGGCCGCGGACTCCTGGGCCTCG
CCCTGGGCCTCACCTACCCCGACTCCGACATCCTCCTTGTGGATGGCGCC
AAGCCACGTAACGCCGGCGACAAGGGGCTGCGCGCTAAAGGCAACCCCCC
CTTCCGCGCAAAAGTCGACATCCGAGACCTTGACGCTGGCAAGCTGCCGC
TGCCGCAGGGCAAGCGCGTCGTCATCGTGGCCAAGCACCTGTGTGGCGTA
GGAACAGATCTTGCGCTGCGCGCCGCGCTTACGCTGGCGCCTGCAGCAGC
GCTCAACGGCCAAGCGAGGGACCACAGCGGCGGCGGCGGCGGCAGCGGCG
CCAGTGATTGCGGCGGCGCCAGCAATTGCGGCGGCGGCAGCGGCAGCCGC
GCCAGTGATTGCGGCAGCGGCAGCGGCAGCAGATTTGCGGCAGCGCACGG
TCTCGCGGGCGTCGCGATAGCCACATGCTGCCACCACTGCGTCAACCTCA
CGGACTACGTGGGGCGCGCGTTTGCTGAGCGCTGCGGCTTTGACAAGCGC
GATTTCGCCGCCATTGGCCGACTCGGCGGCTGGGCCACTACATTTGGCCC
GGAAGGTGGCGGTCGCAGGCCTGGCAGCAGCAGCGGCGGCGGCGCTGCGC
AGCGCGAAGGTGGCGGTGGCGATGGCGATGGCGATGGCGATGGCGATGGC
GGCAATGAGCACAGCGCGAGCGATAGCGGCATAGGGTGTGAGGGGGGGGG
GGCTGTGCGTACCGACGCTGAGCGGCGAGAGATTGGTCGCAAGTCTAAGG
CGCTCATTGACTGGGGGCGCAAGGAGTATTTGGAAGGCCTGGGTATGGAG
GCGGAGCTGGTGTACTTTTGCGACCGCGCGTTTTCCCCCGAAAACTGCCT
GCTGCTGGCGTGGTTGCCAGGTGGCAAGATGCGCTACTGCCTGTGA