mRNA_10759 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|174058 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA) HSP 1 Score: 810 bits (2092), Expect = 2.630e-296 Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 1
Query: 1 MNHQGLSPKCKSKKAVAKASLPRRQEHQQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCLETFVPQEVLDGVLNMNESAGRLC 1221
MNHQGLSPKCKSKKAVAKASLPRRQEHQQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCLETFVPQEVLDGVLNMNESAGRLC
Sbjct: 1 MNHQGLSPKCKSKKAVAKASLPRRQEHQQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCLETFVPQEVLDGVLNMNESAGRLC 407
BLAST of jgi.p|Trimin1|174058 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA) HSP 1 Score: 593 bits (1530), Expect = 1.560e-210 Identity = 302/412 (73.30%), Postives = 336/412 (81.55%), Query Frame = 1
Query: 4 NHQGLSPKCKSKKAVAKASLP-RRQEHQQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXX------PYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCLETFVPQEVLDGVLNMNESAGRL 1218
+H L P C S ++P +RQEH +WVKLQ GTVPSPRSGHDVAVVG+K+YLFGGCGGENDAINCLNDMYTFDLD H WE + +G+ +P+ARASF MC+GP T+IVAGGTGVEMDSLRSD+L+FDTRT+ W K+ DG+DAPS+FYGQTVCRYG VLLLFGGSTGLHYTNDLFEYN+ TNCWRKL T G+RPSPRYKHQAVVVGD MYVIGGGCFKPEQ+AID+Y L+LRTLVW P G VPRARVAHSCSFDP T TIYLWGGFTGELSRLQDF+AY EW EI+T P XXXXXXXXXX PYARAFHSAVF+ GALYVFSGANGDVRYNDVWR+++RS+PPALGVLA RALLH+R GVQ MM LE +P EVLD VL MNESA RL
Sbjct: 13 SHGLLLPSCSS-------AIPLQRQEHNRWVKLQVCGTVPSPRSGHDVAVVGNKLYLFGGCGGENDAINCLNDMYTFDLDRHVWELIPHRGEEMPTARASFAMCSGPDEKTLIVAGGTGVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPSKFYGQTVCRYGDVLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQGRRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRTLVWAQPRSAGAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWTEIRTAPPXXXXXXXXXXXXXXXXXXXXXVAPYARAFHSAVFYKGALYVFSGANGDVRYNDVWRYRMRSSPPALGVLAGRALLHSRLGVQQMMALEALLPHEVLDAVLTMNESASRL 417
BLAST of jgi.p|Trimin1|174058 vs. uniprot
Match: D7FP81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP81_ECTSI) HSP 1 Score: 494 bits (1272), Expect = 1.190e-171 Identity = 243/378 (64.29%), Postives = 288/378 (76.19%), Query Frame = 1
Query: 88 WVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVW--DTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCLE--TFVPQEVLDGVLNMNESA 1209
WV+LQTSG PSPRSGHDVAV+G+K YLFGGCGG+ D I CLNDMY FDL HRWE KGDS+ ARASFGMC GP T+IVAGGTGVEMDSLR+DV+E++TRT+ W+ + D E+ P +FYGQ+VC YG LLLFGGSTGLHY+NDLFEYN+ +N WRKL TTG++PSPRYKHQAV VGD MYVIGGGCFKPEQ++IDLY LDL+TLVW D M G++P+ARVAHSCSFDP IYLWGGFTGELSRL DF+ Y+ A W + DA+ P ARAFHSAVFHDGALY+FSGANGD+RYNDVWR++VR +PP+L VLA++ LL SG+ + L+ VP EV++GV +MNE A
Sbjct: 32 WVRLQTSGRPPSPRSGHDVAVIGNKAYLFGGCGGDEDQITCLNDMYVFDLQLHRWERAVPKGDSI-HARASFGMCQGPTPGTVIVAGGTGVEMDSLRADVVEYNTRTRTWTSVLTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYSNDLFEYNVCSNRWRKLTTTGRKPSPRYKHQAVAVGDKMYVIGGGCFKPEQSSIDLYCLDLKTLVWEMDETEMKGDLPKARVAHSCSFDPVGGDIYLWGGFTGELSRLADFYVYNCKSACWRRLVMEGGDASPP--------------ARAFHSAVFHDGALYLFSGANGDIRYNDVWRYQVRGSPPSLAVLASKVLLE-ESGLNTNLELKFKNKVPDEVIEGVKHMNEYA 393
BLAST of jgi.p|Trimin1|174058 vs. uniprot
Match: D7FP90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP90_ECTSI) HSP 1 Score: 486 bits (1251), Expect = 2.800e-168 Identity = 240/381 (62.99%), Postives = 278/381 (72.97%), Query Frame = 1
Query: 79 HQQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCLETFVPQEVLDGVLNMNESAGRLC 1221
H QW KL TSG PSPRSGHDV V+G K YLFGGCGGE D I CLND+Y F+L+ HRW VT KGD+ P RASFGMCAGPA T+IVAGGTGVEMDSLR+DV+E++ + W++I D E+ P +FYGQ+VC YG LLLFGGSTGLHYTNDLFEYN+ TN W++L T+G+ PSPRYKHQAVVVG MYVIGGGCFKPEQ+ IDLY LDLR+LVW+ M GE+P+ARVAHSCSFD T TIYLWGGFT ELSRLQDFF + A W + P A P A P ARAFHSA F G LYVFSGANGDVRY+DVWRF+VRSTPP+L +L A + G + ++ P E++ GV MNE A RLC
Sbjct: 34 HNQWTKLNTSGDSPSPRSGHDVVVIGHKAYLFGGCGGEQDQITCLNDVYVFNLELHRWSKVTVKGDA-PLPRASFGMCAGPAPGTLIVAGGTGVEMDSLRADVVEYNVPNRTWTQILTDSEETPCKFYGQSVCTYGDNLLLFGGSTGLHYTNDLFEYNVRTNKWKRLVTSGRMPSPRYKHQAVVVGHKMYVIGGGCFKPEQSGIDLYCLDLRSLVWEETTMKGELPKARVAHSCSFDAETDTIYLWGGFTSELSRLQDFFGFHCPTATWVRMAEEPTQA--PVAGGATDLVGAPP-ARAFHSAAFFQGGLYVFSGANGDVRYSDVWRFQVRSTPPSLSMLVAHKI--KSGGEAPLKEMDMRAPAELVQGVREMNEHADRLC 408
BLAST of jgi.p|Trimin1|174058 vs. uniprot
Match: A0A836CEB6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB6_9STRA) HSP 1 Score: 448 bits (1152), Expect = 3.410e-153 Identity = 233/389 (59.90%), Postives = 281/389 (72.24%), Query Frame = 1
Query: 88 WVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGE-NDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAAN-TIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEW--AEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCL-----------ETFVPQEVLDGVLNMNESA 1209
WV LQTSG PSPRSGHDV V+G K YLFGGCGGE ND I CLND+YTFDLD+H+W V G+ P RASFGMCA P+ + +I+VAGGTGVEMDSLR+D++EFDTRT+ W ++ D E+ P RFYGQ++C YG LLLFGGSTG+HYTNDL+EYN TT WRKL TTG++P+PRYKHQAV+VG +MYVIGGGCFKPEQ+ ID++RLDL TL WD A G+VP++RVAHSC +D T TI+LWGGFT ELSRLQDF+ A W A P + XXXXXXXXX P ARAFH+A F + ALYVFSGANGDVRY+DVWR++ ++PP+LGVLAAR + + +P EV D VL+ N+ A
Sbjct: 20 WVCLQTSGQGPSPRSGHDVVVIGRKAYLFGGCGGESNDQIACLNDVYTFDLDTHQWNAVAVNGEP-PLPRASFGMCARPSPHRSIVVAGGTGVEMDSLRADIVEFDTRTRAWRRVVTDSEETPCRFYGQSLCTYGESLLLFGGSTGMHYTNDLYEYNTTTQRWRKLTTTGRKPTPRYKHQAVIVGASMYVIGGGCFKPEQSTIDVHRLDLATLAWDEVATSGDVPKSRVAHSCCYDAGTGTIFLWGGFTSELSRLQDFYTLHCETATWRAAAALAPAVVSGVVXXXXXXXXXXXLPPARAFHAACFFEDALYVFSGANGDVRYSDVWRYQACASPPSLGVLAARLVRAAXXXXXXXXXXXXXXXXXXXRHKRHLPSEVADAVLHFNQHA 407
BLAST of jgi.p|Trimin1|174058 vs. uniprot
Match: A0A7S2XVZ9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVZ9_9STRA) HSP 1 Score: 288 bits (736), Expect = 1.840e-90 Identity = 157/373 (42.09%), Postives = 214/373 (57.37%), Query Frame = 1
Query: 88 WVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGEN-DAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAP-SRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHM-MCLETFVPQEVLDGVLNM 1197
W K+ +GT+ RSGH + V SKVYLFGGCGGE+ + +CL+D FD + W V +G+ P ARASFGM GP T+IVAGGTG +MD+ SD+ E++ + W ++ GE A ++YGQ++C Y L FGGS G Y+N L+ Y+ + TTGK P PRYK Q +VV D++ VIGGG ++P ID++ LDL TL W G VP+ RVAH+C++D T IYLWGGF L RL DF D A +W+ I + P RAFH + HDG+ Y+F GA+GD R++DVWRF+ TPP+L + A + ++S + +P EVLDG+ M
Sbjct: 33 WQKVPCAGTITGGRSGHGMVVYQSKVYLFGGCGGESVEERSCLSDFLVFDFSTQSWSAVQTRGEP-PHARASFGMSRGPDPGTLIVAGGTGQDMDTF-SDIYEYNISSSTW-RLLIKGEKANFCKYYGQSICEYKGNLFFFGGSRGRTYSNVLYRYDCAQEEGAAVPTTGKAPCPRYKQQMMVVKDSLLVIGGGNYRPPTHQIDVHELDLLTLNWSQWKTSGNVPQGRVAHTCTYDENTHQIYLWGGFNVVLHRLNDFHVLDIATRKWSTIIS---------------LDNQSPRPRAFHCSCLHDGSFYIFGGADGDFRHSDVWRFRTNVTPPSLMSICAGTVAKSQSPKTAADETISQSLPHEVLDGIKQM 387
BLAST of jgi.p|Trimin1|174058 vs. uniprot
Match: A0A835Z6H5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H5_9STRA) HSP 1 Score: 281 bits (720), Expect = 1.130e-88 Identity = 142/347 (40.92%), Postives = 206/347 (59.37%), Query Frame = 1
Query: 76 EHQQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALL 1116
+HQ+W+ L T G P RSGH VVG K+Y+FGGC D + ND++ FD +H W + A+G P RA+FGMCAGP +A G+ + S +D+ F+TR + W+K+ ++P YG ++C YG +LL++ G+TG Y+N L+ ++ T+ K++TTG PS RYKH++ VV D MYV GGGCF P + + + RLDLR+L W + G+ AR A SC DP T ++++GGF + +RLQ F YD EW ++T P ARAFHS ++ G+LY+ GANG ++ND+W++++RSTPP L +LAA ALL
Sbjct: 9 QHQEWLHLNTFGDRPCARSGHSAVVVGGKIYVFGGC----DGVAVYNDLHRFDTVTHEWSVIHAEGGPTP--RAAFGMCAGPGEEDFTIACGSNTQHMSAFADIWRFNTRRRAWTKMF----ESPKALYGVSICWYGRMLLMYAGTTGSKYSNHLYAFDARTSGVAKVSTTGVCPSRRYKHESFVVNDDMYVFGGGCFAPTEGCMFISRLDLRSLEWKQVDVEGDTSVARTAVSCCVDPETLKVWVFGGFDADNTRLQAFQNYDLTSNEWNVVQT-----------------VCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDIWQYRIRSTPPTLQMLAAHALL 328
BLAST of jgi.p|Trimin1|174058 vs. uniprot
Match: A0A835Z314_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z314_9STRA) HSP 1 Score: 274 bits (701), Expect = 3.480e-85 Identity = 155/367 (42.23%), Postives = 201/367 (54.77%), Query Frame = 1
Query: 28 CKSKKAVAKASLPRRQEHQQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGG-ENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGP-AANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHT 1122
C SKK A ++ +WV L+TSG P PRSGH V G+ +LFGGCG E D + LND Y+F+L++H+W+ V + P+AR+SF MCA P + +I VAGGTG + DSL D++EFDT + WS++ G D P YGQ+ C YG L+LFGG++GL Y N G F P+ + +D+Y L+L TLVW GE P++RVAH+CSFD AT TI +WGGF+ L RLQDF + A W + P RAFH+A FH GALY+F GA+GD RYNDVWR+ VR +PP+LGVLAAR L T
Sbjct: 3 CTSKKRAAVSAPTWGSTLGRWVCLETSGEGPCPRSGHHVVQSGNTAFLFGGCGHTELDKLAALNDAYSFNLETHQWQLVKVNSEP-PTARSSFSMCAPPDGSRSIFVAGGTGADPDSLCHDIVEFDTHARTWSRVVDVG-DTPWILYGQSQCAYGGSLILFGGTSGLEYVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAFMPQYSVVDVYCLNLITLVWKAVNTSGEAPQSRVAHTCSFDGATDTILMWGGFSSTLHRLQDFHILHCSTATWTTETS------------------NQPPPRAFHAACFHKGALYLFCGADGDNRYNDVWRYTVRESPPSLGVLAARQLRAT 349
BLAST of jgi.p|Trimin1|174058 vs. uniprot
Match: A0A835ZA21_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA21_9STRA) HSP 1 Score: 267 bits (683), Expect = 4.770e-83 Identity = 137/366 (37.43%), Postives = 209/366 (57.10%), Query Frame = 1
Query: 79 HQQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALLHTRSGVQHMMCLETFVPQEV 1176
H++WV L T G P RSGH VV K+Y+FGGC D + ND++ FD +H W + ++G P RA+FGMCAGP + +A G+ + S SD+ F+TR + W+K+ ++P YG ++C YG +LL++ G+TGL Y N L+ ++ T+ K++TTG PS RYKH++ ++ D MYV GGGCF P + + + RL+LR+L W + + R A SC DP T ++++GGF + +RLQ F YD +W + + P +RAFHS ++ G+L++ GANG ++NDVW++++RSTPP+L +LAA A L + H C +P E+
Sbjct: 10 HREWVLLNTFGDPPCARSGHAAVVVRGKIYVFGGC----DGVVVYNDLHWFDTATHEWSAIHSEGGPTP--RAAFGMCAGPGEDDFTIACGSDTQYMSAFSDIWSFNTRRRTWTKLF----ESPKALYGVSICWYGRMLLMYAGTTGLEYCNHLYAFDSLTSSVVKVSTTGVCPSRRYKHESFILDDDMYVFGGGCFAPTEGCMFISRLNLRSLEWKQVQVQNDTSIPRTAFSCCMDPETLKVWVFGGFDADNTRLQAFQCYDMQLRKWENVAS-----------------VCSPPSRAFHSMIYSQGSLFLMLGANGKRKFNDVWQYRIRSTPPSLQMLAAHAFLR----LPHSACRPA-IPDEM 343
BLAST of jgi.p|Trimin1|174058 vs. uniprot
Match: A0A836CI07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI07_9STRA) HSP 1 Score: 257 bits (657), Expect = 2.790e-79 Identity = 139/345 (40.29%), Postives = 186/345 (53.91%), Query Frame = 1
Query: 88 WVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGT---GVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGEVPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARAL 1113
W ++Q +G P RSGH V+G VYLFGG + ND+Y ++ + W + +KG + PS RA+F +CAGP + GG G ++ DV +DT W ++T + P++ YG + C Y LL++GGS+G HY + + +YN + W L T G PS RYKH V+GD+MY+IGGG FKP Q +ID+Y+ + R W G+VP R AH C FD + IY +GGF ++R D YDT I P ARAFH+AV +DGALYV GA+GDVRY DVWRF +TPP VLAARAL
Sbjct: 7 WTRIQATGEGPLSRSGHGAVVIGDMVYLFGGY----RDVATQNDLYRLNMRTLEWTHILSKG-AWPSPRATFAICAGPEPTQFTIVGGAEGDGGTAGTVSCDVWVYDTTIHEWKRLT---KACPNKVYGASACWYDGRLLVYGGSSGSHYYDGVVQYNPRKDTWHTLITYGDPPSARYKHACGVMGDSMYIIGGGAFKPPQDSIDMYKFNFRNFEWSAVEAEGKVPPGRTAHCCWFDATSGIIYTFGGFDKRMTRQSDLSEYDTLTHNRRSIHA-----------------NNVPPARAFHAAVLYDGALYVLGGADGDVRYGDVWRFAFTTTPPTCQVLAARAL 326 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174058 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10759 ID=mRNA_10759|Name=jgi.p|Trimin1|174058|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1224bp|location=Sequence derived from alignment at Contig_110:520416..522335- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAATCACCAGGGCCTGAGTCCCAAGTGTAAATCAAAAAAGGCGGTGGCback to top protein sequence of jgi.p|Trimin1|174058 >Trimin1|174058|e_gw1.110.84.1 ID=Trimin1|174058|e_gw1.110.84.1|Name=jgi.p|Trimin1|174058|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=408bp MNHQGLSPKCKSKKAVAKASLPRRQEHQQWVKLQTSGTVPSPRSGHDVAVback to top mRNA from alignment at Contig_110:520416..522335- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10759 ID=mRNA_10759|Name=jgi.p|Trimin1|174058|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1920bp|location=Sequence derived from alignment at Contig_110:520416..522335- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_110:520416..522335- >mRNA_10759 ID=mRNA_10759|Name=jgi.p|Trimin1|174058|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1224bp|location=Sequence derived from alignment at Contig_110:520416..522335- (Tribonema minus UTEX_B_3156 )back to top |