mRNA_10737 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|174053 vs. uniprot
Match: A0A835ZJB6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJB6_9STRA) HSP 1 Score: 493 bits (1268), Expect = 5.500e-176 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 1
Query: 1 MERAGRESVIGAAVRKTAELLRNGSTSTSPDGGNAPRLHFMGEEVDETGKTSLEKATVTLIIKRSHERFLPPGYNKCAVVKKLHLQAVHDSWAAFLAGASPTFRAHVEEDDSGRVMSPVTFFYDLFWARLFTVAPRLRALFGDNMVRQSRCLIRMTCEIAGLLEALAAGRGTAGLEAVAHANIEIGLRAEHYEPLAAVLRHALEFCLGEPAWTPLVAESWMRAIAVFVNASVSVTVAALEDGARQETEAEQ 753
MERAGRESVIGAAVRKTAELLRNGSTSTSPDGGNAPRLHFMGEEVDETGKTSLEKATVTLIIKRSHERFLPPGYNKCAVVKKLHLQAVHDSWAAFLAGASPTFRAHVEEDDSGRVMSPVTFFYDLFWARLFTVAPRLRALFGDNMVRQSRCLIRMTCEIAGLLEALAAGRGTAGLEAVAHANIEIGLRAEHYEPLAAVLRHALEFCLGEPAWTPLVAESWMRAIAVFVNASVSVTVAALEDGARQETEAEQ
Sbjct: 1 MERAGRESVIGAAVRKTAELLRNGSTSTSPDGGNAPRLHFMGEEVDETGKTSLEKATVTLIIKRSHERFLPPGYNKCAVVKKLHLQAVHDSWAAFLAGASPTFRAHVEEDDSGRVMSPVTFFYDLFWARLFTVAPRLRALFGDNMVRQSRCLIRMTCEIAGLLEALAAGRGTAGLEAVAHANIEIGLRAEHYEPLAAVLRHALEFCLGEPAWTPLVAESWMRAIAVFVNASVSVTVAALEDGARQETEAEQ 251
BLAST of jgi.p|Trimin1|174053 vs. uniprot
Match: A0A835ZFA8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA8_9STRA) HSP 1 Score: 223 bits (568), Expect = 9.300e-70 Identity = 105/218 (48.17%), Postives = 157/218 (72.02%), Query Frame = 1
Query: 109 RLHFMGEEVDETGKTSLEKATVTLIIKRSHERFLPPGYNKCAVVKKLHLQAVHDSWAAFLAGASPTFRAHVEEDDSGRVMSPVTFFYDLFWARLFTVAPRLRALFGDNMVRQSRCLIRMTCEIAGLLEALAAGRGTAGLEAVAHANIEIGLRAEHYEPLAAVLRHALEFCLGEPA---WTPLVAESWMRAIAVFVNASVSVTVAALEDGARQETEAEQ 753
+LH G++ +G+ S+ +AT ++ IKRSHE+FLPP + + L V++SWA FL+G S + A ++ED++ +V SPVTFFYD F++RLFT+AP +R++FGDNMVRQSRCL+RM CE AG+ EA AA +G +G + VA AN E+G+R+EHY P+A+ L+++L +C GE WT ++E+W AIA+F+ A S T+AALE+ +++E+EQ
Sbjct: 10 KLHITGQDPSVSGEASISRATFSVAIKRSHEKFLPPDMDFKVTMTASQLSTVYESWATFLSGDSSAYHAQLDEDNTDKVQSPVTFFYDTFYSRLFTLAPSMRSVFGDNMVRQSRCLVRMICECAGMHEAFAANKGLSGAQTVAQANAELGIRSEHYAPIASALKYSLAYCFGEGGMYGWTAALSEAWTGAIALFIAACTSTTIAALEEAEPKQSESEQ 227
BLAST of jgi.p|Trimin1|174053 vs. uniprot
Match: A0A835ZDM5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDM5_9STRA) HSP 1 Score: 159 bits (402), Expect = 3.140e-46 Identity = 77/120 (64.17%), Postives = 94/120 (78.33%), Query Frame = 1
Query: 349 SPVTFFYDLFWARLFTVAPRLRALFGDNMVRQSRCLIRMTCEIAGLLEALAAGRGTAGLEAVAHANIEIGLRAEHYEPLAAVLRHALEFCLGEPAWTPLVAESWMRAIAVFVNASVSVTV 708
+PV FF+D F+ +LF AP+L ++ GDNMVRQSR L+RMTCE AGLLE+L +G+G GLE+VA NI +GLRAEHYEP+A L ALE CLGE AWT VA+SW+R IA+FVN SVS TV
Sbjct: 1 TPVAFFFDTFYTKLFFAAPKLASILGDNMVRQSRTLVRMTCECAGLLESLTSGKGLGGLESVARDNIGVGLRAEHYEPIATTLLQALETCLGEQAWTAPVAQSWLRVIALFVNVSVSATV 120
BLAST of jgi.p|Trimin1|174053 vs. uniprot
Match: A0A835ZD45_9STRA (GLOBIN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD45_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.260e-44 Identity = 90/185 (48.65%), Postives = 119/185 (64.32%), Query Frame = 1
Query: 169 TVTLIIKRSHERFLPPGYNKCAVVKKLHLQAVHDSWAAFLAGASPTFRAHVEEDDSGRVMSPVTFFYDLFWARLFTVAPRLR--ALFGDNMVRQSRCLIRMTCEIAGLLEALAAGRGTAGLEAVAHANIEIGLRAEHYEPLAAVLRHALEFCLGEPAWTPLVAESWMRAIAVFVNASVSVTVAAL 717
T+T+ +KR+H +LPPGY + A V KL L+AVHDS+ AF+AG SP + A +E+ + SP +F YD F+A L+ AP+LR A G +M RQSR L+ + E+AGL ALA G AGL VA A+ E+GLR HY +A L AL C G AWTP VA +W +A+AVFV ++ VT A L
Sbjct: 1000 TLTVTLKRAHTHYLPPGYQRRAAVTKLQLEAVHDSFEAFIAGRSPPYEAWAQENAARGSASPASFLYDAFYAELYAAAPKLRSRAFGGGSMFRQSRALMPLLGELAGLAAALAGGSSAAGLARVAAAHSELGLRPHHYGAVAGALLSALPRCFGAQAWTPAVAAAWRQAVAVFVTIAIGVTAAEL 1184
BLAST of jgi.p|Trimin1|174053 vs. uniprot
Match: A0A835Z9V8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9V8_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.770e-41 Identity = 86/184 (46.74%), Postives = 116/184 (63.04%), Query Frame = 1
Query: 172 VTLIIKRSHERFLPPGYNKCAVVKKLHLQAVHDSWAAFLAGASPTFRAHVEEDDSGRVMSPVTFFYDLFWARLFTVAPRLR--ALFGDNMVRQSRCLIRMTCEIAGLLEALAAGRGTAGLEAVAHANIEIGLRAEHYEPLAAVLRHALEFCLGEPAWTPLVAESWMRAIAVFVNASVSVTVAAL 717
+T+ +KR+H +LPPGY + A V KL L+AVHDS+ AF+AG P + A +E+ + SP +F YD F+A L+ AP+LR A G +M RQSR L+ + E+AGL ALA G AGL VA A+ E+GL HY +A L AL C G AWTP A++W A+AVF+N ++ VT AL
Sbjct: 1455 LTVTLKRAHALYLPPGYQRRAAVTKLQLEAVHDSFEAFIAGRPPPYEAWAQENAARGSASPASFLYDAFYAELYVAAPKLRSRAFGGGSMFRQSRALMPLLGELAGLAAALAGGSSAAGLAHVAAAHSELGLGPHHYGAVAGALLLALPRCFGAQAWTPAGADAWRHAVAVFMNVAIGVTAVAL 1638
BLAST of jgi.p|Trimin1|174053 vs. uniprot
Match: A0A835ZB17_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB17_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 3.550e-16 Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 1
Query: 163 KATVTLIIKRSHERFLPPGYNKCAVVKKLHLQAVHDSWAAFLAGASPTFRAHVEEDDSGRVMSPVTFFYDLFWARLFTVAPRLR--ALFGDNMVRQSRCLIRMTCEIAGLLEALAAGRGTAGLEAVAHANIEIGL 561
+ +T+ +KRS R LPPG + V L L+AV S+ AF+ G SP F+A +D+ R SP F ++ F+A L+ AP L+ G N+VRQSR ++ + E+A L AL+ G G AGL VA A+ G+
Sbjct: 535 RPALTVTVKRSQARHLPPGCQRRVTVTALQLEAVRASFGAFVEGRSPPFKAW-RRNDACRSASPALFLHNAFFAALYAAAPELQHCVFGGGNIVRQSRAVMPLLRELARLAAALSGGSGAAGLVQVAAAHTARGV 668
BLAST of jgi.p|Trimin1|174053 vs. uniprot
Match: W4FN33_9STRA (GLOBIN domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FN33_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 5.660e-10 Identity = 42/139 (30.22%), Postives = 66/139 (47.48%), Query Frame = 1
Query: 271 SWAAFLAGASPTFRAHVEEDDSGRVMSPVTFFYDLFWARLFTVAPRLRALFGDNMVRQSRCLIRMTCEIAGLLEALAAGRGTAGLEAVAHANIEIGLRAEHYEPLAAVLRHALEFCLGEPAWTPLVAESWMRAIAVFVN 687
+W A G +P RA SPV +FYD F+ RLF VAP +R+LF +++ Q + LI + IA + + A A + +A+ + + G++ ++Y L VL L C G WT + W A +
Sbjct: 53 NWEAIACGHTPAMRAKGHS-------SPVVYFYDSFYTRLFEVAPEVRSLFRSSIIVQGKALINIVQSIANGVNSADA---IANVVELAYRHNQYGVKMQYYNVLGRVLLEVLRDCTGHELWTNELDVGWRTVYAYMMT 181
BLAST of jgi.p|Trimin1|174053 vs. uniprot
Match: A0A6A4ZSW8_9STRA (GLOBIN domain-containing protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZSW8_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 8.340e-10 Identity = 48/182 (26.37%), Postives = 83/182 (45.60%), Query Frame = 1
Query: 184 IKRSHERFLPPGYN-------------KCAVVKKLHLQAVHDSWAAFLAGASPTFRAHVEEDDSGRVMSPVTFFYDLFWARLFTVAPRLRALFGDNMVRQSRCLIRMTCEIAGLLEALAAGRGTAGLEAVAHANIEIGLRAEHYEPLAAVLRHALEFCLGEPAWTPLVAESWMRAIAVFVNA 690
+KRS E L P Y +C + + +AV+++W A G + + G SPV +FYD F+ +LF VAP +R+LF +++ Q + LI + I +++ G+ +A+ + + G++ ++Y L VL L C G WT + +W A + A
Sbjct: 38 LKRSGELVLHPTYKAFLVDRCPDFAHVRCKITPSMQ-RAVNENWEAIANGTTFAMQR------KGHASSPVVYFYDSFYTKLFEVAPEVRSLFRTSIIVQGKALINI---IQSIIKGPITTDAVGGVVDLAYRHNKYGVKMQYYNILGRVLLLTLGECTGSEFWTSDLELAWRTVYAYMMTA 209
BLAST of jgi.p|Trimin1|174053 vs. uniprot
Match: A0A485LMH2_9STRA (Aste57867_22737 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LMH2_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.880e-7 Identity = 46/160 (28.75%), Postives = 78/160 (48.75%), Query Frame = 1
Query: 217 GYNKCAVVKKL-HLQAVHDSWAAFLAGASPTFRAHVEEDDSGRVMSPVTFFYDLFWARLFTVAPRLRALFGDNMVRQSRCLIRMTCEIA-GLLEALAAGRGTAGLEAVAHANIEIGLRAEHYEPLAAVLRHALEFCLGEPAWTPLVAESWMRAIAVFVNA 690
+ +C + ++ HL V +W A GA+P + G SPV +FYD F+ +LF AP +R+LF +++ Q + LI + + G L A A G + +A+ + + G++ ++Y L VL AL C G+ W + +W A + A
Sbjct: 51 AFVRCKLTPEMQHL--VGANWDAITTGATPAMKR------KGHA-SPVIYFYDSFYTKLFEAAPEIRSLFRASIIVQGKALISIIQSVVKGPLTADAIGE----VVELAYRHNKYGIKMQYYNILGRVLLLALGECTGDELWDATLDLAWRTVYAYMMTA 197
BLAST of jgi.p|Trimin1|174053 vs. uniprot
Match: A0A1Y0BIU3_9BACT (G386 n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1Y0BIU3_9BACT) HSP 1 Score: 58.9 bits (141), Expect = 1.920e-7 Identity = 37/107 (34.58%), Postives = 56/107 (52.34%), Query Frame = 1
Query: 370 DLFWARLFTVAPRLRALFGDNMVRQSRCLIRMTCEIAGLLEALAAGRGTAGLEAVAHANIEIGLRAEHYEPLAAVLRHALEFCLGEPAWTPLVAESWMRAIAVFVNA 690
DLF+ RLFT+AP +R++F D++ Q + LI M L + +E++ ++ G+ A+HYEP+ A L LE LG P +TP V +W A A
Sbjct: 25 DLFYDRLFTIAPEVRSMFPDDIKDQKKKLIAMLATAVTNLHQVETI--LPAVESLGKRHVAYGVTADHYEPVGAALLWTLEQGLG-PDFTPSVKAAWTEAYVTLAGA 128 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174053 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10737 ID=mRNA_10737|Name=jgi.p|Trimin1|174053|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=753bp|location=Sequence derived from alignment at Contig_110:345110..345862- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGAGAGGGCAGGCAGGGAAAGCGTTATTGGAGCGGCAGTCAGGAAAACback to top protein sequence of jgi.p|Trimin1|174053 >Trimin1|174053|e_gw1.110.68.1 ID=Trimin1|174053|e_gw1.110.68.1|Name=jgi.p|Trimin1|174053|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=251bp MERAGRESVIGAAVRKTAELLRNGSTSTSPDGGNAPRLHFMGEEVDETGKback to top mRNA from alignment at Contig_110:345110..345862- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10737 ID=mRNA_10737|Name=jgi.p|Trimin1|174053|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=753bp|location=Sequence derived from alignment at Contig_110:345110..345862- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_110:345110..345862- >mRNA_10737 ID=mRNA_10737|Name=jgi.p|Trimin1|174053|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=753bp|location=Sequence derived from alignment at Contig_110:345110..345862- (Tribonema minus UTEX_B_3156 )back to top |