mRNA_10665 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|174954 vs. uniprot
Match: A0A835ZH31_9STRA (Peptidase family M48-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH31_9STRA) HSP 1 Score: 538 bits (1386), Expect = 4.380e-193 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 1 Query: 1 QHPFDQEATAALKRLPGLEAAVRSFIPIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQPPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLKRGAELVDAGPVAPPPPVAR 831 QHPFDQEATAALKRLPGLEAAVRSFIPIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQPPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLKRGAELVDAGPVAPPPPVAR Sbjct: 1 QHPFDQEATAALKRLPGLEAAVRSFIPIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQPPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLKRGAELVDAGPVAPPPPVAR 277
BLAST of jgi.p|Trimin1|174954 vs. uniprot
Match: D8LQV2_ECTSI (Putative peptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV2_ECTSI) HSP 1 Score: 362 bits (929), Expect = 8.890e-122 Identity = 177/263 (67.30%), Postives = 213/263 (80.99%), Query Frame = 1 Query: 1 QHPFDQEATAALKRLPGLEAAVRSFIPIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQPPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLKRGAEL 789 QHPFD EAT L+R PGLE A+R +P +ED +++DNIAN++LVGP Q+ S+H LL+AC ILDMQPP++Y+RQNPTPNAYTLA+ GKKPFIVLH+SL+DLM P E+QAVIAHELGHLKCEHGIW+T A V+ +GL F LG+ VA+ LGLRR L RW AE +CDRAA+LVAQDVNVVVSTLLKL GGSV A ELSV EFLKQA AYDLAS+TR+G+LL+ E THPLPV+RA+EL +S SPQYLG+++RG L Sbjct: 132 QHPFDLEATGMLRRFPGLEMAIRGAVPAIEDAVFMDNIANSILVGPRQMASLHGLLLEACRILDMQPPDLYIRQNPTPNAYTLAIRGKKPFIVLHTSLLDLMEPEEVQAVIAHELGHLKCEHGIWVTLATVVANGLYGRGF-LGAFVADRLGLRRRLMRWSRAAEFTCDRAAMLVAQDVNVVVSTLLKLAGGSVSQASELSVPEFLKQASAYDLASQTRIGKLLKREQSLELTHPLPVVRARELVKFSESPQYLGLVRRGLPL 393
BLAST of jgi.p|Trimin1|174954 vs. uniprot
Match: A0A6V1X7Z1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1X7Z1_HETAK) HSP 1 Score: 299 bits (765), Expect = 1.280e-97 Identity = 153/272 (56.25%), Postives = 203/272 (74.63%), Query Frame = 1 Query: 1 QHPFDQEATAALKRLPGLEAAVRSFIPIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQ-PPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGG----SVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLKRGAELVDAG 801 +HP D++ATA L+RLPGLE VR P+VE+ +YLDNIA ++ VGP Q+ ++H+ L+ AC ILD++ PP++YV+QNP+PNAYTLAV G+KPFIVLH+SLIDLM+P E+QAV+AHELGH+KCEHG+W++AAN++ GL G +++EAL L+ W+ AEL+CDRAALLVAQD VVVST+LKLVGG ++ +S EFLKQA+ Y A +R+GRLL + THPLPV+RAQEL W+R P+Y G+L+RGA L G Sbjct: 68 RHPVDRQATAQLQRLPGLEQIVRRATPLVEEAVYLDNIATSIKVGPGQMPALHQLLVDACRILDIKDPPQLYVKQNPSPNAYTLAVQGRKPFIVLHTSLIDLMTPQEVQAVLAHELGHIKCEHGLWLSAANLVALGLLAVGGVPGQLLSEALS--SLIMPWQRAAELTCDRAALLVAQDPAVVVSTILKLVGGVGGPALGEYGGVSPDEFLKQAEEYAEARSSRVGRLLTADQDRALTHPLPVVRAQELARWARGPEYRGLLRRGAPLAGGG 337
BLAST of jgi.p|Trimin1|174954 vs. uniprot
Match: K9T9Q6_9CYAN (Zn-dependent protease with chaperone function n=3 Tax=Pleurocapsales TaxID=52604 RepID=K9T9Q6_9CYAN) HSP 1 Score: 276 bits (706), Expect = 1.970e-89 Identity = 138/262 (52.67%), Postives = 196/262 (74.81%), Query Frame = 1 Query: 1 QHPFDQEATAALKRLPGLEAAVRSFI-PIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQPPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAAN--VLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLKR 777 +HP D +AT ALK+LPGL+ VRS + P+ E YL+NIA+++LVG +QL +HK LL+AC ILD++PP++YV+QNP PNAYT A+ GK+PF+VLH+SLI++++P E+QAV+AHELGHLKCEHG+++T N VL +GL S G+V+A++L R + +W AE SCDRAALL QD VV+S L+KL GGS A +L++ F++QA+AYD S T LG++L++ A+ THP+PV+RA+E+D W+ S Y +L+R Sbjct: 17 RHPLDLQATTALKQLPGLDMLVRSLLGPVAEQFFYLNNIASSILVGENQLPHLHKLLLEACQILDLEPPQLYVQQNPIPNAYTFAMRGKQPFMVLHTSLIEMLTPEEIQAVMAHELGHLKCEHGVYLTLVNIVVLAAGLLPS---WGTVIAQSL--REQMLQWVRCAEFSCDRAALLAIQDPKVVMSVLMKLTGGSPTLAPQLNLDAFIEQARAYDAISETELGQMLKTAQTAQLTHPVPVLRAREIDRWASSQDYQRLLQR 273
BLAST of jgi.p|Trimin1|174954 vs. uniprot
Match: A0A1Y1I8J9_KLENI (Peptidase family M48 family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I8J9_KLENI) HSP 1 Score: 277 bits (708), Expect = 6.080e-89 Identity = 144/272 (52.94%), Postives = 188/272 (69.12%), Query Frame = 1 Query: 1 QHPFDQEATAALKRLPGL-EAAVRSFIPIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQPPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQY---LGVLKRGAELVDAGP 804 QHP D++ TA L+ PG+ E A F P+ E + L+NIA +V VG HQL ++K L +A ILDM P++Y+RQNPTPNAYTLA++G+KPFIV+H+SL++L++PAELQAV+AHE+GHLKC+HG+W+T ANVL A S GLG + A L L RW AEL+CDRAALLVAQD VVVS L+KL GG AD+L+V FL QA++YD AS + G LR+ + +HPLPV+RA+E+D WSR QY +G + A V P Sbjct: 72 QHPLDRQNTAILRAFPGIQEIAKMLFSPVAEQVLLLENIATSVRVGEHQLTRVYKLLTEAADILDMDAPDLYIRQNPTPNAYTLAIAGRKPFIVVHTSLVELLTPAELQAVLAHEMGHLKCDHGVWLTFANVLAMS-AGSLPGLGRFI--AANLEDKLMRWLRAAELTCDRAALLVAQDPKVVVSVLMKLAGGCPSLADDLNVDSFLNQARSYDEASNSPFGWYLRNAQTRQLSHPLPVLRAREIDEWSRGKQYQLLMGAVSTAAASVGGSP 340
BLAST of jgi.p|Trimin1|174954 vs. uniprot
Match: A0A7C3PD19_9CYAN (M48 family peptidase n=1 Tax=Oscillatoriales cyanobacterium SpSt-418 TaxID=2282169 RepID=A0A7C3PD19_9CYAN) HSP 1 Score: 275 bits (702), Expect = 7.970e-89 Identity = 139/264 (52.65%), Postives = 187/264 (70.83%), Query Frame = 1 Query: 1 QHPFDQEATAALKRLPGLEAAVRSFI-PIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQPPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLKRGAEL 789 +HP D +ATA LK LPGL+ AVRS + PI E YL+NIA +V V QL +HK LL+AC +LD++PP++YVRQ+P PNAYT A+ GK+PFIV+H+SLIDL++PAE+QAVIAHELGHLKCEH +++T AN+L + G GSV+A+ L+ L W AE SCDRAALL QD VV S L+KL GGS A +L++ FL QA+AY+ S+ +LG +L+ A+ THP+PV+RA+E+D W+ S Y +L++ L Sbjct: 17 RHPLDLQATANLKSLPGLDLAVRSLLGPIAEQVFYLENIAASVQVSEQQLPDLHKLLLEACQVLDLEPPQLYVRQHPVPNAYTFAMRGKQPFIVVHTSLIDLLTPAEIQAVIAHELGHLKCEHSVYLTLANILVLATGQLP-GAGSVLAQ--NLQAQLMEWVRCAEFSCDRAALLATQDARVVASVLMKLAGGSPTLASQLNLDAFLAQARAYEDISKNQLGAMLKQAATAQLTHPVPVLRAKEIDRWASSKDYHDLLQKRPNL 277
BLAST of jgi.p|Trimin1|174954 vs. uniprot
Match: UPI0019DB20E1 (M48 family metallopeptidase n=1 Tax=Pleurocapsales cyanobacterium LEGE 06147 TaxID=1828827 RepID=UPI0019DB20E1) HSP 1 Score: 275 bits (702), Expect = 7.970e-89 Identity = 137/260 (52.69%), Postives = 193/260 (74.23%), Query Frame = 1 Query: 1 QHPFDQEATAALKRLPGLEAAVRSFI-PIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQPPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGL-GSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLK 774 +HP D +AT +LK+ PGL+ A+RS + P+ E YL+NIA++VLV QL +HK LL+AC ILD++PP++YV+QNP PNAYT A+ GK+PF+VLH+SLI++++P E+QAVIAHELGHLKCEHG+++T AN++ LA + G+++A++L + L RW AE SCDRAALLV QD VV+S L+KL GGS A +L++ F++QA+AYD +T+LG LL+ A+ THP+PVIRA+E+D W S +Y +LK Sbjct: 17 RHPLDLQATTSLKQFPGLDIAIRSLLGPVAEQFFYLNNIASSVLVSEKQLPYLHKLLLEACQILDLEPPQLYVQQNPVPNAYTFAMRGKQPFMVLHTSLIEMLTPEEIQAVIAHELGHLKCEHGVYLTLANIMV--LAATLLPTWGAILAQSLQEQML--RWIRCAEFSCDRAALLVTQDPKVVMSVLMKLAGGSPSLASQLNLEAFIEQARAYDAVDQTQLGELLKQAQTAQLTHPVPVIRAREIDRWGSSFEYQNILK 272
BLAST of jgi.p|Trimin1|174954 vs. uniprot
Match: UPI001682EAB3 (M48 family metallopeptidase n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001682EAB3) HSP 1 Score: 274 bits (700), Expect = 1.500e-88 Identity = 134/259 (51.74%), Postives = 193/259 (74.52%), Query Frame = 1 Query: 1 QHPFDQEATAALKRLPGLEAAVRSFI-PIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQPPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLK 774 +HP DQE+T ALK+LPGL+ +R+ I P+ E YL+NIA++VLVG QL +H LL+AC +LD++PP++YVRQ+P PNAYT A+ GK+PFIV+H+SL+DL++P E+QAVIAHELGHLKC+HG+++T AN+L+ LA + +G V+A+AL + + W AE +CDRAALLVAQD +V S L+KL GGS + +L+V FL+QA++YD S ++G +L+ + THP+PV+RA+E+D W+ S +Y +LK Sbjct: 16 RHPLDQESTQALKQLPGLDILIRNLIGPLGEQFFYLENIASSVLVGEQQLPQLHTLLLEACEVLDLEPPQLYVRQHPVPNAYTFAMRGKQPFIVVHTSLLDLLTPEEIQAVIAHELGHLKCDHGVYLTLANLLS--LAATQLPMGEVLAQALQTQ--MMEWVRCAEFTCDRAALLVAQDPRIVASLLMKLSGGSPTLSSQLNVEAFLEQARSYDAISSDQIGDMLKQIRTQDLTHPVPVLRAREVDRWASSQEYFQLLK 270
BLAST of jgi.p|Trimin1|174954 vs. uniprot
Match: UPI001F43F90C (M48 family metallopeptidase n=1 Tax=Leptodesmis sichuanensis TaxID=2906798 RepID=UPI001F43F90C) HSP 1 Score: 274 bits (700), Expect = 1.550e-88 Identity = 138/259 (53.28%), Postives = 188/259 (72.59%), Query Frame = 1 Query: 1 QHPFDQEATAALKRLPGLEAAVRSFI-PIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQPPEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLK 774 +HP D EATA LK+LPGL+ VR+ + P+ E YL+NIA++VLVG QL +HK LL AC ILD++PP++YVRQ+P PNAYT A+ GK+PFIV+H+SL++L++P E+QAVIAHELGHLKCEHG+++T AN+L + +G G VA+AL + L W AE SCDRAALL Q+ VV S L+KL GGS A +L++ FL QA+AYD S+ ++G LL+ + A+ THP+PV+RA+E+D WS S Y +L+ Sbjct: 17 RHPLDLEATANLKQLPGLDVMVRNLLGPLAEQFFYLENIASSVLVGEQQLPDLHKLLLDACQILDLEPPQLYVRQHPVPNAYTFAMRGKQPFIVIHTSLLELLTPDEIQAVIAHELGHLKCEHGVYLTLANLLVLAAGQLPWGAG--VAQALQTQ--LLEWVRCAEFSCDRAALLATQNPRVVASVLMKLAGGSPTLASQLNLDAFLAQARAYDEISKDQIGELLKQAMTAQLTHPVPVLRAREIDRWSSSQAYQALLE 271
BLAST of jgi.p|Trimin1|174954 vs. uniprot
Match: A0A4D9CNP9_9STRA (Peptidase_M48 domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CNP9_9STRA) HSP 1 Score: 277 bits (709), Expect = 1.870e-88 Identity = 135/262 (51.53%), Postives = 192/262 (73.28%), Query Frame = 1 Query: 1 QHPFDQEATAALKRLPGLEAAVRSFIPIVEDTIYLDNIANAVLVGPHQLQSIHKSLLQACAILDMQP-PEVYVRQNPTPNAYTLAVSGKKPFIVLHSSLIDLMSPAELQAVIAHELGHLKCEHGIWITAANVLTSGLARSAFGLGSVVAEALGLRRLLQRWRLTAELSCDRAALLVAQDVNVVVSTLLKLVGGSVRNADELSVHEFLKQAKAYDLASRTRLGRLLRSTVMAEATHPLPVIRAQELDTWSRSPQYLGVLKRGA 783 +HP DQ+ T L+ LPGLE VR + ++E+ +Y+DNI++A+LVGP Q+ S+H SL++A +ILD+ PE+Y++Q+P PNAY +A+ G++PFIV+H+SL+DL+SPAE+Q V+AHEL H+KCEHG++ITAAN L GL LG V+ + L LL W AE SCDR ALLV+QD++ V+S LLKLVGGS + A +LS FL+QA++YD A + LGRL++S + THPLPV+R +EL+ W +S Y G++ RG+ Sbjct: 101 RHPLDQQITEQLRLLPGLEWGVRQAMRVLEEAVYIDNISSAILVGPTQMPSLHSSLVEAASILDLPVLPELYIKQSPVPNAYCMAIQGRRPFIVMHTSLLDLLSPAEVQVVLAHELSHIKCEHGVFITAANALALGLYSLGGSLGRVLGDRLS--SLLYAWLRAAEFSCDRGALLVSQDLDTVLSALLKLVGGSQQLAGQLSTEAFLQQARSYDQAVGSPLGRLIKSQMEPGLTHPLPVLRVRELERWYKSDMYTGIIARGS 360 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|174954 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10665 ID=mRNA_10665|Name=jgi.p|Trimin1|174954|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=834bp|location=Sequence derived from alignment at Contig_119:406771..409905+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAGCATCCCTTTGATCAAGAGGCGACTGCGGCATTGAAGCGGTTACCGGGback to top protein sequence of jgi.p|Trimin1|174954 >Trimin1|174954|e_gw1.119.30.1 ID=Trimin1|174954|e_gw1.119.30.1|Name=jgi.p|Trimin1|174954|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=278bp QHPFDQEATAALKRLPGLEAAVRSFIPIVEDTIYLDNIANAVLVGPHQLQback to top mRNA from alignment at Contig_119:406771..409905+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10665 ID=mRNA_10665|Name=jgi.p|Trimin1|174954|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3135bp|location=Sequence derived from alignment at Contig_119:406771..409905+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_119:406771..409905+ >mRNA_10665 ID=mRNA_10665|Name=jgi.p|Trimin1|174954|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=834bp|location=Sequence derived from alignment at Contig_119:406771..409905+ (Tribonema minus UTEX_B_3156 )back to top |