mRNA_10634 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|352452
Unique NamemRNA_10634
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|352452 vs. uniprot
Match: A0A835ZFB8_9STRA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFB8_9STRA)

HSP 1 Score: 432 bits (1111), Expect = 2.510e-150
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 3
Query:   24 MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDMWALAK 674
            MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDMWALAK
Sbjct:    1 MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDMWALAK 217          
BLAST of jgi.p|Trimin1|352452 vs. uniprot
Match: D7FHE2_ECTSI (NAD(P)-bd_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHE2_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 7.110e-51
Identity = 92/187 (49.20%), Postives = 123/187 (65.78%), Query Frame = 3
Query:   27 NAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAA-----------KIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLV 554
             AVVFG+TGA+G+EVV  LA+ ++   VVA VRR    +EW   G AA            K++VK ++YD +  SLP+  +      FYCLGTTR DAGSA++F K+D+ YLE +  +C+ A V HFSLV++ GASASSP LY K KG+CE  V+  G+   SIW+PGLLGRG KA+ VE++  +LV
Sbjct:   18 KAVVFGSTGAVGKEVVRALAESEQCQSVVAVVRRLTPVSEW--RGDAAKSKTSGSDANFNKVEVKRINYDTLETSLPEQEMRGKQVVFYCLGTTRSDAGSAANFKKVDFSYLEGVCQLCRVAGVDHFSLVSSQGASASSPLLYPKVKGQCEKLVRSAGYPHTSIWRPGLLGRGSKAKGVEKVARFLV 202          
BLAST of jgi.p|Trimin1|352452 vs. uniprot
Match: A0A067D405_SAPPC (NAD(P)-bd_dom domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D405_SAPPC)

HSP 1 Score: 159 bits (402), Expect = 2.690e-43
Identity = 99/222 (44.59%), Postives = 133/222 (59.91%), Query Frame = 3
Query:   15 IAGMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPE--GPAAAKIQVKVLDYD-----DIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQEAAPPCTFGNKDM 659
            +A   A+V GATGAIGREVV QLA   + ++VVA  RR ++ +       G AA+KI V V+DYD     D+AG            AF CLGTTRKDAGS   F K+D  Y+E +  + K A + +F+LV+A+ A+A+S FLY KTKG  E+ +K L F   +I QPGLL RG+ +RFVER+  +++  + V+ VAKAMV D E   A      C   + DM
Sbjct:    1 MAEYTALVVGATGAIGREVVKQLAASARCTQVVALSRRAMDASALAAAFPGAAASKIHVHVVDYDHLQPADVAGH-------GANAAFCCLGTTRKDAGSDEAFRKVDLTYVENVGKLAKEANLPYFALVSASNANAASWFLYPKTKGLAEDAIKALSFPRTTIAQPGLLQRGDLSRFVERVGHWVLPTVSVAAVAKAMVTDYETSGATPGL--CILSHNDM 213          
BLAST of jgi.p|Trimin1|352452 vs. uniprot
Match: A0A1V9YKB4_9STRA (Oxidoreductase htatip2-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKB4_9STRA)

HSP 1 Score: 158 bits (400), Expect = 5.790e-43
Identity = 92/203 (45.32%), Postives = 126/203 (62.07%), Query Frame = 3
Query:   15 IAGMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAA--AKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAA 617
            +A   AVV GATGAIGRE+V QL +  + + V+A  RR ++ +      P A  AKI+V+V+DYD +   L   +      AF CLGTTRKDAGS   F K+D  Y+E  A + K A +++F+LV+A+ A+A S FLY KTKG  E  +K LGF    I QPGLL RG+  R+VER+  +++  + V+ VAKAM+ D E   A
Sbjct:    1 MAEYRAVVVGATGAIGRELVKQLTESTRCTSVIALSRRALDPSALAAAFPGATIAKIRVQVVDYDHL--QLADVASHGANAAFCCLGTTRKDAGSDEAFRKVDLTYVENSAKLAKEADIQYFALVSASNANARSWFLYPKTKGLAEEAIKALGFRRTCILQPGLLQRGDLTRYVERVGQWILPSVSVTGVAKAMIRDYETNGA 201          
BLAST of jgi.p|Trimin1|352452 vs. uniprot
Match: K3X5R0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5R0_GLOUD)

HSP 1 Score: 154 bits (389), Expect = 2.730e-41
Identity = 85/203 (41.87%), Postives = 124/203 (61.08%), Query Frame = 3
Query:   30 AVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAA------AKIQVKVLDYDDIA-GSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAA 617
            A+V G+TGA+GR++V +L Q  K +KV+A  RR +  ++W    PA        K++++ +D+D +A G +     + +  AF CLGTTRKDAGSA  F K+D  Y  Q   + K A+V +F L+TA+ A+ +S FLY KTKG  E  +K L F   S ++PGL+ RGE  R VE + +Y++  I  S +AK MVAD E+  A
Sbjct:    5 ALVIGSTGAVGRDLVAELVQSAKCAKVIALSRREIPESKWSATFPALDATLAQGKLEIRQVDFDQLASGQVIIQPEEKIDAAFSCLGTTRKDAGSAEAFRKVDLEYTTQFGELAKAAKVPYFGLLTASNANKNSWFLYPKTKGEAEESIKVLQFERTSFFRPGLINRGELMRTVEMIGSYVIPSITTSAIAKGMVADYESNVA 207          
BLAST of jgi.p|Trimin1|352452 vs. uniprot
Match: A0A2D4BNE4_PYTIN (Oxidoreductase htatip2-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BNE4_PYTIN)

HSP 1 Score: 152 bits (383), Expect = 2.410e-40
Identity = 85/204 (41.67%), Postives = 120/204 (58.82%), Query Frame = 3
Query:   15 IAGMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEA 608
            ++   A+V G+TGA+GRE++ +L    K  KV+A  RR +   +W    P      A  K+QV+ +D+D + G       + V  AF CLGTTRKDAGSA  F K+D  Y+ +   + K A++ +  L+TA  A+ +S FLY +TKG  E+ +  L FA   I++PGLL RGE AR VE++  YL   I  + VAK MVAD EA
Sbjct:    8 LSAYTALVVGSTGAVGRELIAELVASAKCEKVIALARREIPEEQWTTAFPRVXVXAAKKKLQVRAVDFDAL-GEKDVPPTERVDAAFCCLGTTRKDAGSAEAFRKVDLEYVTRFGELAKAAQIPYMGLLTATNANKNSWFLYPQTKGEAEDNIIKLSFARTGIFRPGLLNRGELARTVEKIGLYLTPSITATAVAKGMVADFEA 210          
BLAST of jgi.p|Trimin1|352452 vs. uniprot
Match: K3XC48_GLOUD (Epimerase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC48_GLOUD)

HSP 1 Score: 151 bits (382), Expect = 2.930e-40
Identity = 82/199 (41.21%), Postives = 123/199 (61.81%), Query Frame = 3
Query:   30 AVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQT-SLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAE 605
            A+V G+TGA+GR++V +L +  K +KV+A  RR +  ++W    P      A  K++++ +D+D +A S     S + +  AF CLGTTRKDAGS   F K+D  Y  Q   + K A+V +F L+TA  A+ +S FLY KTKG  E  +K L F   S++QPG++ RGE  R VE++T+ ++  I  S +AK+M+AD E
Sbjct:    5 ALVIGSTGAVGRDLVAELVKSAKCAKVIALSRREIPESKWTTTFPTLDETLAQGKLEIRQVDFDQLASSQAIIQSEEKIDAAFSCLGTTRKDAGSTEAFRKVDLVYTTQFGELTKAAKVPYFGLLTANNANKNSWFLYPKTKGEVEENIKALQFERTSLFQPGVINRGELMRTVEKVTSCILPSITTSAIAKSMIADYE 203          
BLAST of jgi.p|Trimin1|352452 vs. uniprot
Match: A0A5J4XPQ6_9CHLO (NAD(P)-bd_dom domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XPQ6_9CHLO)

HSP 1 Score: 148 bits (373), Expect = 6.360e-39
Identity = 93/204 (45.59%), Postives = 122/204 (59.80%), Query Frame = 3
Query:   24 MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASAS------SPF---LYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEA 608
            M AVV G TG++G EVV  L     W++V A  RR V  +    +G   +K+  +V++ D++      ++ DN  + F  LGTTRKDAGSA  F K+D  Y++  A   K A V HFSL T  GA+A+      SPF   LY+KTKG+ E  VK  GFA VSI++PG L RGEKAR+ ER+ + L    PV  VA+AMV DAEA
Sbjct:    1 MKAVVVGGTGSVGMEVVGLLLHSPAWTQVTAVGRREVVISA-AYQGYNPSKLVQEVVNMDNLPDEAA-SAFDNAHSVFCTLGTTRKDAGSAEQFKKVDLHYVQLAAQAAKQAGVTHFSLCTVRGANANMWASSLSPFHALLYIKTKGQAEEAVKAQGFACVSIFRPGALDRGEKARWNERLASRLTTATPVRDVARAMVLDAEA 202          
BLAST of jgi.p|Trimin1|352452 vs. uniprot
Match: A0A3R7NAX8_9STRA (NAD(P)-bd_dom domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7NAX8_9STRA)

HSP 1 Score: 148 bits (373), Expect = 7.320e-39
Identity = 85/201 (42.29%), Postives = 118/201 (58.71%), Query Frame = 3
Query:   21 GMNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAE 605
            G  A+V GATGA+GR++V +L      SKVVA  RR +  T W    P      A  K+++  +D++++     +   + V  AF CLGTTRKDAGSA  F K+D  Y+   A + K A V +F L+TA+ A+  S FLY +TKG  E  +K LGF   SI++PGL+ RGEK R VE + +Y++  I    +AK MV D E
Sbjct:    2 GFVALVQGATGAVGRDLVAELVDSASCSKVVALTRREIPETSWGETFPLMDVAAAQTKLEIVPVDFEELHRDWKKIP-EEVDAAFSCLGTTRKDAGSAEAFRKVDLEYVTTFAELAKEAGVPYFGLLTASNANKDSWFLYPQTKGEVEENIKHLGFERTSIFRPGLIDRGEKTRTVESIASYVLPSITTRIIAKGMVVDYE 201          
BLAST of jgi.p|Trimin1|352452 vs. uniprot
Match: A0A8K1CHX1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHX1_PYTOL)

HSP 1 Score: 147 bits (372), Expect = 8.200e-39
Identity = 80/203 (39.41%), Postives = 121/203 (59.61%), Query Frame = 3
Query:   27 NAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGP------AAAKIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYGYLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFALVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAA 617
             A+V G+TGA+GR+VV +L    K +KV+A  RR +   +W    P      A +K++V+ +D+D ++    +   + V TAF CLGTTR+DAGS   F K+D  Y+ +   + K A V +F L+T+ G++ +S FLY +TKG  E  +K L F   SI++PGL+ RGE AR VE+   ++   +    +AK+MV D E  AA
Sbjct:    6 TALVVGSTGAVGRDVVAELVSSAKCAKVIALTRRDIPQDQWSKTFPQLDVEAAKSKLEVRAVDFDKLSADDVKRGDEKVDTAFCCLGTTRRDAGSPEAFRKVDLEYVTRFGELTKAAEVPYFGLLTSMGSNKNSWFLYPQTKGEAEENIKKLSFERTSIFRPGLINRGELARAVEKAALWVSPSVTTVAIAKSMVKDFEEGAA 208          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|352452 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFB8_9STRA2.510e-150100.00NAD(P)-bd_dom domain-containing protein n=1 Tax=Tr... [more]
D7FHE2_ECTSI7.110e-5149.20NAD(P)-bd_dom domain-containing protein n=2 Tax=Ec... [more]
A0A067D405_SAPPC2.690e-4344.59NAD(P)-bd_dom domain-containing protein n=2 Tax=Sa... [more]
A0A1V9YKB4_9STRA5.790e-4345.32Oxidoreductase htatip2-like protein n=1 Tax=Achlya... [more]
K3X5R0_GLOUD2.730e-4141.87Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BNE4_PYTIN2.410e-4041.67Oxidoreductase htatip2-like protein n=1 Tax=Pythiu... [more]
K3XC48_GLOUD2.930e-4041.21Epimerase domain-containing protein n=1 Tax=Globis... [more]
A0A5J4XPQ6_9CHLO6.360e-3945.59NAD(P)-bd_dom domain-containing protein n=1 Tax=Tr... [more]
A0A3R7NAX8_9STRA7.320e-3942.29NAD(P)-bd_dom domain-containing protein n=4 Tax=Ph... [more]
A0A8K1CHX1_PYTOL8.200e-3939.41Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_119contigContig_119:260023..263007 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|352452|estExt_Genemark1.C_Ctg_1190042
BRITEko00000,ko01000,ko04147
KEGG koko:K17290
GOsGO:0003674,GO:0003712,GO:0003713,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006913,GO:0008150,GO:0008152,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010941,GO:0010942,GO:0012505,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019219,GO:0019222,GO:0019538,GO:0022603,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031967,GO:0031975,GO:0036211,GO:0042981,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045765,GO:0045893,GO:0045935,GO:0045944,GO:0046777,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051252,GO:0051254,GO:0051641,GO:0051649,GO:0060255,GO:0060548,GO:0065007,GO:0071704,GO:0080090,GO:0140096,GO:0140110,GO:1901342,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000026,GO:2000112,GO:2001141
Preferred nameHTATIP2
Descriptionangiogenesis
COG categoryGM
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0702@1|root,KOG4039@2759|Eukaryota
Evalue9.56e-54
Seed ortholog2880.D7FHE2
Hectar predicted targeting categoryother localisation
TranscriptId352774
TrackFilteredModels1
ProteinId352452
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352452gene_10634Tribonema minus UTEX_B_3156 geneContig_119 260023..263007 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|352452Trimin1|352452|estExt_Genemark1.C_Ctg_1190042Tribonema minus UTEX_B_3156 polypeptideContig_119 260506..262984 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10634_5exon_10634_5Tribonema minus UTEX_B_3156 exonContig_119 260023..260622 -
exon_10634_4exon_10634_4Tribonema minus UTEX_B_3156 exonContig_119 261264..261383 -
exon_10634_3exon_10634_3Tribonema minus UTEX_B_3156 exonContig_119 261945..262196 -
exon_10634_2exon_10634_2Tribonema minus UTEX_B_3156 exonContig_119 262665..262745 -
exon_10634_1exon_10634_1Tribonema minus UTEX_B_3156 exonContig_119 262901..263007 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_10634UTR3_10634Tribonema minus UTEX_B_3156 three_prime_UTRContig_119 260023..260505 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10634CDS_10634Tribonema minus UTEX_B_3156 CDSContig_119 262901..262984 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_10634UTR5_10634Tribonema minus UTEX_B_3156 five_prime_UTRContig_119 262985..263007 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10634 ID=mRNA_10634|Name=jgi.p|Trimin1|352452|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1160bp|location=Sequence derived from alignment at Contig_119:260023..263007- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TGTGACCGCGCAGAATCGCAGGCATGAACGCCGTCGTGTTTGGAGCAACT
GGAGCCATAGGCAGGGAGGTAGTCACACAGCTGGCGCAGGGAGACAAGTG
GAGCAAGGTTGTTGCTTGCGTGAGGAGGCCAGTAGAAACCACGGAATGGG
TGCCTGAGGGACCTGCAGCTGCCAAGATACAGGTCAAGGTACTCGACTAC
GACGACATCGCCGGATCGCTGCCGCAGACCAGCCTGGACAACGTCGGCAC
GGCTTTCTACTGCCTCGGAACGACGCGCAAGGACGCCGGCTCCGCCAGCG
ACTTTGTCAAGATCGACTACGGCTACCTGGAGCAGATCGCGCCCGTGTGC
AAGGGCGCGCGGGTGCGGCACTTCTCGCTGGTGACGGCGGCCGGCGCGAG
TGCGTCGTCGCCGTTCCTCTACATGAAGACCAAGGGGCGGTGCGAGAACT
TCGTAAAGGGGCTGGGGTTCGCGCTCGTGTCCATCTGGCAGCCGGGGCTG
CTCGGGCGCGGCGAGAAGGCGCGCTTCGTGGAGCGCATGACCGCGTACCT
GGTGCGCGAGATACCCGTGTCAACGGTGGCCAAGGCCATGGTCGCTGACG
CGGAAGCCAAGGCGGCGCAAGAGGCCGCGCCACCGTGCACGTTCGGCAAC
AAGGACATGTGGGCGCTCGCCAAATGAGCCGACGCGGGCGCTCTGCTCTG
CGTACTGCTTGAGACGGCTCGTGTGCAGCGGATGAGTCCCCCTCACGACG
CCATGCCAACTGAATGCGCCAGGGGGGCGCTGTGCGGATGTCGCGATGCC
TTTCCTAAAGTGGCTCGCGCGTGGCGGCCGCGATCACTGCGCGCTTCGCC
CCTCGTGGGCATGCGCCATGCGCTCGACATTGAGGAGCGCACGCCAAATC
CACGAGCCACGGTAGCGCACGCCCACGTTTGCGACTGCCATCTGCAAGCA
CTGGGGCGGCCAATGCAAGACAGCTTGTGCATAGGCATTGGGCGCCTCCA
GCGAGGGCTCTGCATGTGCAAATCATGTCTATTGCTGGGCTGCCGCATGC
CCCTCATGTACGCCATCTAGGTAGGTCGAGGGCTCGTAATTGCGCTGACC
GCAGGCCATGGACATTCGGTCTGGCACTTCAATCAACAGCGTCGGCGCTG
AGGCCCGTGG
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protein sequence of jgi.p|Trimin1|352452

>Trimin1|352452|estExt_Genemark1.C_Ctg_1190042 ID=Trimin1|352452|estExt_Genemark1.C_Ctg_1190042|Name=jgi.p|Trimin1|352452|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=218bp
MNAVVFGATGAIGREVVTQLAQGDKWSKVVACVRRPVETTEWVPEGPAAA
KIQVKVLDYDDIAGSLPQTSLDNVGTAFYCLGTTRKDAGSASDFVKIDYG
YLEQIAPVCKGARVRHFSLVTAAGASASSPFLYMKTKGRCENFVKGLGFA
LVSIWQPGLLGRGEKARFVERMTAYLVREIPVSTVAKAMVADAEAKAAQE
AAPPCTFGNKDMWALAK*
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mRNA from alignment at Contig_119:260023..263007-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10634 ID=mRNA_10634|Name=jgi.p|Trimin1|352452|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2985bp|location=Sequence derived from alignment at Contig_119:260023..263007- (Tribonema minus UTEX_B_3156 )
TGTGACCGCGCAGAATCGCAGGCATGAACGCCGTCGTGTTTGGAGCAACT GGAGCCATAGGCAGGGAGGTAGTCACACAGCTGGCGCAGGGAGACAAGTG GAGCAAGGTGTGTGCGTAGTTGAATTTGTTTTCCGACCTTCAACCTAGTG TGATGAACGCGGATCATCTGGGGCGCTTTCCTGAGGTGCTGTGTGTCTCT ATCATTCACTCCATGATGACGTGACATGCGTGTACGTCTCACTCACTCCT CTTTCACACCAGGTTGTTGCTTGCGTGAGGAGGCCAGTAGAAACCACGGA ATGGGTGCCTGAGGGACCTGCAGCTGCCAAGATACAGGTCAAGGTAAGCC ACGCACATCCATTTGCACGTATCAAGTACATTTTGGGGGCTGAATTACGC TGACATAGCATCCAGTTATGAGTACACTTTCGTTCACAAGTTCCATGTAT TTTGTAAACATCCTGCATGTGAACATCCTGCAATGCCTGCAATGCAGAGA GGGCAACAGTGTGCTGGTTTGATGTTTTGTCTCGGTTTTATATGTGGAGT GTTGTGCAGATCTGTGATGGCATCCACCGACGCACGTAGCTTACATGCAC CAGGTGATCCGACGCATGGCTTTTCTGGTGAAACTGCCTGGTAGCGCCTC GCAGCCGCACCGTGCACGATGTCTGCATGCCCAGCTTGACTTCAAAGCTG CTTGAGGCCAGCAGGCGCAGCAGCCTGAGACTCTAAGACAACGCCGCACA CTGCAGAGAACCGCCAAGAAACCCCATCCCCCCCCCCCATCCCCCCGTCC CCTGGACTCAGGTACTCGACTACGACGACATCGCCGGATCGCTGCCGCAG ACCAGCCTGGACAACGTCGGCACGGCTTTCTACTGCCTCGGAACGACGCG CAAGGACGCCGGCTCCGCCAGCGACTTTGTCAAGATCGACTACGGCTACC TGGAGCAGATCGCGCCCGTGTGCAAGGGCGCGCGGGTGCGGCACTTCTCG CTGGTGACGGCGGCCGGCGCGAGTGCGTCGTCGCCGTTCCTCTACATGAA GACCAAGGGGCGGGTGAGCAACTGGGCCTGTGCGATTGCGCCGCGCTGCG GTGTGCAGTGTGTGATCTCTAAAGGCGCAGGTGGCCTCTGCAGGGGGGCG TGCGTGCAGTGTTGACGCAACCCAGGATGAGTCTGCCGTCCACACTCTTG CCTGTGTTGTATTGATCAAACATTTGTTCAATGGCCTTGTCTGTGACTTG TGATGTGTGACAGGTGATGGCGAGTCTGGGGAATGCACGACATATTTCCG TGCCTATGTGTATGCCTAGGCCTACAGCGTCAGGACAGCGTACTACTCTT TACATGCTGATCCGAATGCGATGCTAGCCAAGCGTCGCGCTTGCAGCGTC ACTTGATGCAAGGCTTCATCAGCCAGCCAGCCTCAGAAAGCGCGTGAATT ATGCAGTGGCCTGCCTCAACGGCTTCATGCATCTCCATCATATGCTGGCA CCACGACTCTCCTTTCTGTTGAGCGTTGGGGACACTTCTGCGGCAACAGC GCGGACCCGCTGCAACTGATTCAATTCATTGCCTTGCAACCACGCTGCTG CTGCCCCGCGCGCGCACGCTTCAGTGCGAGAACTTCGTAAAGGGGCTGGG GTTCGCGCTCGTGTCCATCTGGCAGCCGGGGCTGCTCGGGCGCGGCGAGA AGGCGCGCTTCGTGGAGCGCATGACCGCGTACCTGGTGCGCGAGGTGAGC CGCTGGCGCTGCGCTGAGCGCTGCTGAGTGTTTGCCCAGTTAAGACGCAG TGGCGTGGGCGTCTGGCTTGTGGGTATGCATGCCTGCTTCCTGTTTGTTG TCATCACTCAACCGAGCGCTGCTCTTGGTGCGCGCCTGGGCAGTGCGGGC ACTGTAGCCCGACCACGCTGCACCAGGGGCGCTTTTTGCTGCATGCGGCA ACAGTGCGTGCCCGTTTGTGTTTGCGTACTGACACGAGCCACACCCTCAT TACGGCCTGCCCCACCGCAATTGGCCCTCACGCGTATGGAGAGCGCCCGC TGTCACATGTGGATGTCCTGACGGCTACGCACCCAGGGCAGCATCTGGTG CATCATGCTCAGTTGCAGAGCACACCAGTCTGGTACCACAAGCGACACGA GGTGCAGCCTGGCATGCTGACCACCCGACGCGCACTGCTCATAGCGGTTG CAGCGGCCACATCCCACATGAGCAACAACGCTTAGTCTAATTCAGTCGCT TCGTGGCGCTACGCAACACCGATCGCCGCTGTCGCTTGGGCGCAGCAGCG CATTTCCTTGGACCCCTCTTGACACGTGTCCCCACACCACTAACTGTGCG TGTGCGCGTGCGCGCGTGTGTGTCTGCGCGTGCAGATACCCGTGTCAACG GTGGCCAAGGCCATGGTCGCTGACGCGGAAGCCAAGGCGGCGCAAGAGGC CGCGCCACCGTGCACGTTCGGCAACAAGGACATGTGGGCGCTCGCCAAAT GAGCCGACGCGGGCGCTCTGCTCTGCGTACTGCTTGAGACGGCTCGTGTG CAGCGGATGAGTCCCCCTCACGACGCCATGCCAACTGAATGCGCCAGGGG GGCGCTGTGCGGATGTCGCGATGCCTTTCCTAAAGTGGCTCGCGCGTGGC GGCCGCGATCACTGCGCGCTTCGCCCCTCGTGGGCATGCGCCATGCGCTC GACATTGAGGAGCGCACGCCAAATCCACGAGCCACGGTAGCGCACGCCCA CGTTTGCGACTGCCATCTGCAAGCACTGGGGCGGCCAATGCAAGACAGCT TGTGCATAGGCATTGGGCGCCTCCAGCGAGGGCTCTGCATGTGCAAATCA TGTCTATTGCTGGGCTGCCGCATGCCCCTCATGTACGCCATCTAGGTAGG TCGAGGGCTCGTAATTGCGCTGACCGCAGGCCATGGACATTCGGTCTGGC ACTTCAATCAACAGCGTCGGCGCTGAGGCCCGTGG
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Coding sequence (CDS) from alignment at Contig_119:260023..263007-

>mRNA_10634 ID=mRNA_10634|Name=jgi.p|Trimin1|352452|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=654bp|location=Sequence derived from alignment at Contig_119:260023..263007- (Tribonema minus UTEX_B_3156 )
ATGAACGCCGTCGTGTTTGGAGCAACTGGAGCCATAGGCAGGGAGGTAGT
CACACAGCTGGCGCAGGGAGACAAGTGGAGCAAGGTTGTTGCTTGCGTGA
GGAGGCCAGTAGAAACCACGGAATGGGTGCCTGAGGGACCTGCAGCTGCC
AAGATACAGGTCAAGGTACTCGACTACGACGACATCGCCGGATCGCTGCC
GCAGACCAGCCTGGACAACGTCGGCACGGCTTTCTACTGCCTCGGAACGA
CGCGCAAGGACGCCGGCTCCGCCAGCGACTTTGTCAAGATCGACTACGGC
TACCTGGAGCAGATCGCGCCCGTGTGCAAGGGCGCGCGGGTGCGGCACTT
CTCGCTGGTGACGGCGGCCGGCGCGAGTGCGTCGTCGCCGTTCCTCTACA
TGAAGACCAAGGGGCGGTGCGAGAACTTCGTAAAGGGGCTGGGGTTCGCG
CTCGTGTCCATCTGGCAGCCGGGGCTGCTCGGGCGCGGCGAGAAGGCGCG
CTTCGTGGAGCGCATGACCGCGTACCTGGTGCGCGAGATACCCGTGTCAA
CGGTGGCCAAGGCCATGGTCGCTGACGCGGAAGCCAAGGCGGCGCAAGAG
GCCGCGCCACCGTGCACGTTCGGCAACAAGGACATGTGGGCGCTCGCCAA
ATGA
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