mRNA_10525 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|170530
Unique NamemRNA_10525
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|170530 vs. uniprot
Match: A0A835YKM6_9STRA (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKM6_9STRA)

HSP 1 Score: 592 bits (1525), Expect = 1.050e-213
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 1 
Query:    1 MHHQSTLCARPVLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQIAAALKIESTEAQLGLRAGADPGETSSSSGSFAAS 882
            MHHQSTLCARPVLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQIAAALKIESTEAQLGLRAGADPGETSSSSGSFAAS
Sbjct:    1 MHHQSTLCARPVLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQIAAALKIESTEAQLGLRAGADPGETSSSSGSFAAS 294
[Close]
BLAST of jgi.p|Trimin1|170530 vs. uniprot
Match: A0A836CKL9_9STRA (Histidine phosphatase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL9_9STRA)

HSP 1 Score: 438 bits (1127), Expect = 1.240e-152
Identity = 212/264 (80.30%), Postives = 237/264 (89.77%), Query Frame = 1 
Query:   34 VLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQIAAALKIESTEAQLGL 825
            V+ +RHGESTYNAEGRFIGWADPPL+  GEEEAR A   LRE+G  D +D+IFVSYL+RSIK+GWI+A+ELG SH+PV+SDWRLNEQMYG L+G LKRDVA EHG++LTQKWRRSYDIAPPAV GARGYFPAGD KYA+LTDDDAPESWCGSA+TESLKDTQARAWRLWKERIAPRARAGRT LVV HGNVIRA+LKRLDG+G ERLR+VCIPRAVPLVYELDA+MRPVR+A A G LS  +LANP QIAA +K+ES EAQLGL
Sbjct:   26 VIFMRHGESTYNAEGRFIGWADPPLSALGEEEARGAGQLLREYGLGD-VDEIFVSYLKRSIKTGWIVAEELGRSHIPVSSDWRLNEQMYGALEGLLKRDVAREHGLELTQKWRRSYDIAPPAVPGARGYFPAGDPKYADLTDDDAPESWCGSARTESLKDTQARAWRLWKERIAPRARAGRTCLVVAHGNVIRALLKRLDGVGAERLRDVCIPRAVPLVYELDADMRPVRAAQAMGPLSARYLANPGQIAARMKLESNEAQLGL 288
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BLAST of jgi.p|Trimin1|170530 vs. uniprot
Match: A0A6T5MY23_HETAK (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A6T5MY23_HETAK)

HSP 1 Score: 261 bits (668), Expect = 2.330e-82
Identity = 127/259 (49.03%), Postives = 171/259 (66.02%), Query Frame = 1 
Query:   34 VLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQIAAALKIESTE 810
            ++ +RHGES +N +  F GW D  +TE G +EAR A   ++  G     D ++ S L+R+IKS   + D +G   + ++ DW+LNEQMYG L+G  K D   EHG++  QKWRRSY   PPA  GARGYFP  D KYA LT+ DAP+SWCG+  TESLKDTQARAWRLW+E IAP  +AG+  LV  HGN +RA L+RLD I N+ L ++ IPRA PLVY LD  + P++S  +   LSG F+ + +++ A +  E T+
Sbjct:   82 IVFIRHGESVWNQDNIFTGWQDIDVTEAGVQEARAAGELMQRQGLE--FDVVYTSMLKRAIKSAHHVTDAMGLGWIDMHKDWKLNEQMYGRLEGLNKVDCVQEHGLEQVQKWRRSYTDPPPARPGARGYFPEDDPKYAGLTNFDAPDSWCGTPGTESLKDTQARAWRLWREEIAPAVKAGKRVLVCAHGNTLRAFLRRLDDIPNDLLMQLDIPRATPLVYTLDEHLNPIQSTSSMYPLSGRFIGSMEELEAKVSKERTQ 338
[Close]
BLAST of jgi.p|Trimin1|170530 vs. uniprot
Match: A0A7S2V0B9_9STRA (Phosphoglycerate mutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0B9_9STRA)

HSP 1 Score: 250 bits (639), Expect = 6.660e-78
Identity = 126/256 (49.22%), Postives = 166/256 (64.84%), Query Frame = 1 
Query:   34 VLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQIAAALKIE 801
            V+ LRHGEST+N +  F GW D  LT+RG +EAR     + +HG     D ++ S L+R+IK+  +  D +  S V V  DWRLNEQMYG L+GR K+    EHG +  QKWRR Y  APP      GYFP  D +YA+ TD DAP+SWCGS  TESLKDTQAR W LW++ I P  ++G+  LV  HGNV+RA++KRLD I  E ++ + IPRA+P+VY LD +M P+ +A +   +SG FLA+  Q+  AL  E
Sbjct:  108 VVLLRHGESTWNEQNIFTGWKDVGLTDRGIQEARDVGKVMNKHGLE--FDMVYTSLLKRAIKTSALTLDTMDQSFVEVRKDWRLNEQMYGALEGRNKKACVKEHGYEQVQKWRRGYHTAPPPNKKQNGYFPD-DPQYAQFTDLDAPDSWCGSPGTESLKDTQARVWSLWRKEIMPNIKSGKRVLVCCHGNVLRALMKRLDNISIETIQSIDIPRAMPIVYTLDKDMNPIMTAKSSFPISGRFLADKSQLHEALARE 360
[Close]
BLAST of jgi.p|Trimin1|170530 vs. uniprot
Match: GPMA_GEOSL (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=4 Tax=Geobacter TaxID=28231 RepID=GPMA_GEOSL)

HSP 1 Score: 216 bits (549), Expect = 4.770e-66
Identity = 114/254 (44.88%), Postives = 153/254 (60.24%), Query Frame = 1 
Query:   28 RPVLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQIAAA 789
            R ++ +RHGES +N E RF GW D  LT++G  EA RA   L+  GFA   D+ F S L+R+IK+ WI+ +E+    +P +  WRLNE+ YG LQG  K + A  HG++    WRRSYDI PP +A      PA D +YAEL   D P        TESLKDT AR    W E IAPR  AGR  L+  HGN +RA++K LDGIG++ +  + IP  +PLVYEL+ ++ P+RS         Y+L +P ++A A
Sbjct:    2 RTLVLIRHGESVWNRENRFTGWTDVGLTDKGAAEALRAGRTLKNEGFA--FDEAFTSVLKRAIKTLWIVLEEMDQMWIPEHRHWRLNERHYGALQGLNKAETAERHGMEQVHVWRRSYDIPPPPLAAGDPRNPARDPRYAELDPADIP-------LTESLKDTVARFLPYWHETIAPRILAGRRLLIAAHGNSLRALVKYLDGIGDDAIAGLNIPTGIPLVYELEDDLHPIRS---------YYLGDPDEVARA 237
[Close]
BLAST of jgi.p|Trimin1|170530 vs. uniprot
Match: B7GEI2_PHATC (Phosphoglycerate mutase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GEI2_PHATC)

HSP 1 Score: 214 bits (546), Expect = 8.190e-65
Identity = 107/257 (41.63%), Postives = 156/257 (60.70%), Query Frame = 1 
Query:   13 STLCARPVLSL-RHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQI 780
            S LC +  L L RHGEST+N E RF GW D PL+E GEEEA +    LRE G+    D  + S L+R+IK+ WI+ +E+   ++P+ ++WRLNE+ YG LQG  K++   +HG D   +WRRSYDI PP +     YFP  D  Y ++  +D P++       ESLK T+ R    W++ + P  ++G   L+  HGN +RA++K LD I  E +  + IP  VPLVYELD E++P+    A   LSG++L + +++
Sbjct:   47 SALCMKYTLVLVRHGESTWNKENRFTGWVDCPLSEAGEEEAHKGGQLLREGGYH--FDKAYTSTLKRAIKTLWIVLEEMDLMYLPITNNWRLNERHYGALQGLNKQETVDKHGKDQVLEWRRSYDIPPPDIDEDSEYFPGNDPMYKDVPKEDLPKA-------ESLKLTEERFMSWWEDTLVPEIKSGTKILIAAHGNTLRALVKHLDNISPEDITGLNIPTGVPLVYELDEELKPIPHKDAIAPLSGHYLGDQEEV 294
[Close]
BLAST of jgi.p|Trimin1|170530 vs. uniprot
Match: L1I6G3_GUITC (Phosphoglycerate mutase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1I6G3_GUITC)

HSP 1 Score: 212 bits (540), Expect = 2.150e-64
Identity = 107/254 (42.13%), Postives = 158/254 (62.20%), Query Frame = 1 
Query:   34 VLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQIAAALK 795
            ++ +RHGES +N E RF GW D PL E G +EA+RA+++L+  GF+   D +F S L+R+IK+G +I ++LG   +PV+ DWRLNE+ YG LQG  K++   +HG +    WRRSYD  PP ++    Y+     ++  L D            TE LKDT AR    WKE  AP  ++GR  LV  HGN +RA++K LDG+ +E +  + IP A+PLVY+LD  ++PVR+  A+  LSG +L +P+ +  A++
Sbjct:   18 LVLVRHGESQWNKENRFTGWVDVPLAETGIDEAKRASNSLKSEGFS--FDVMFTSLLQRAIKTGLLILEDLGLLWIPVDKDWRLNERHYGALQGLNKKETVEKHGSEQVNLWRRSYDTPPPPMSPDSPYWAGNQPQHKSLKD---------LPSTECLKDTVARVLPWWKEVCAPAIKSGRKVLVAAHGNSLRALVKYLDGLSDEEICSLNIPTAIPLVYKLDKNLKPVRAEGAYAPLSGRYLGDPEMVRNAIE 260
[Close]
BLAST of jgi.p|Trimin1|170530 vs. uniprot
Match: A0A836CGX1_9STRA (Histidine phosphatase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGX1_9STRA)

HSP 1 Score: 214 bits (544), Expect = 3.390e-64
Identity = 111/254 (43.70%), Postives = 156/254 (61.42%), Query Frame = 1 
Query:   25 ARPVLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQIAA 786
            A  V+ +RHG+ST+N   RFIGW DP LT+ GE EAR A   L   G+    D I+ S L+RSIK+ W++ DELG  HVPV +DWRLNE+ YG L GR K++    +G D  + WRRS+D+ PP ++     +P  + KY  L     P       +TESL+DTQAR+   W   I P  R+G+   V GH N +R++LK LDG+ ++ +R V +PRAVPL+Y LD   +P+R   A   L+G ++ + ++IAA
Sbjct:    8 AYKVIFVRHGQSTWNKANRFIGWTDPNLTKTGELEARVAGQVLLAAGYE--FDIIYTSLLKRSIKTAWVVMDELGLHHVPVVTDWRLNERCYGALVGRNKKECVRVYGEDQVKLWRRSFDVRPPPISEDSSLWPGNNRKYDFLERALIP-------RTESLQDTQARSVDCWDNTIVPTIRSGKRVCVCGHENNLRSLLKHLDGVSDDDIRHVELPRAVPLIYHLDENFKPIRLEGAAPHLNGRYIGDAEEIAA 252
[Close]
BLAST of jgi.p|Trimin1|170530 vs. uniprot
Match: A0A7X7WRW4_9BACT (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Nitrospiraceae bacterium TaxID=2026770 RepID=A0A7X7WRW4_9BACT)

HSP 1 Score: 209 bits (531), Expect = 2.470e-63
Identity = 107/249 (42.97%), Postives = 155/249 (62.25%), Query Frame = 1 
Query:   34 VLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQI 780
            V+ LRHGES +N E RF GW D PL+E+G EEA++A   +++ GF    D  + S L+R+IK+ W+  +E+   ++PV++ WRLNE+ YG LQG  K + A +HG+D  + WRRSYDI PPA+A      PA D +YA     D P        TESLK+T +R    W E IAP  ++G+  ++  HGN +RA++K LD I    + E+ IP  VPLVYELDA+++P+R+         Y+L +P++I
Sbjct:    4 VVLLRHGESQWNKENRFTGWTDVPLSEKGIEEAKKAGKLMKDAGFV--FDVAYTSVLKRAIKTLWLALEEMDLMYIPVHNSWRLNERHYGALQGLNKAETAEKHGMDQVKIWRRSYDIPPPALAADDPRNPAKDPRYAGANPSDLP-------LTESLKETVSRFVPYWLETIAPVVKSGKRVIIAAHGNSLRALVKYLDNISEADIVELNIPTGVPLVYELDADLKPIRN---------YYLGDPEEI 234
[Close]
BLAST of jgi.p|Trimin1|170530 vs. uniprot
Match: A0A662FCC4_9ARCH (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A662FCC4_9ARCH)

HSP 1 Score: 207 bits (528), Expect = 7.210e-63
Identity = 105/254 (41.34%), Postives = 157/254 (61.81%), Query Frame = 1 
Query:   34 VLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHALREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMYGMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAELTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHGNVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALSGYFLANPKQIAAALK 795
            ++ LRHG+ST+N E +F GW D  LTERG EEA+RA   L++HGF    D  + SYL+R+I++ WI+ DE+    +P    WRLNE+ YG LQG  K ++A + G +    WRRSYD+ PPA+  +   +P  D KY EL++++ P        TESLKDT  R    W   IAP  +AG+  ++   GN +RA++K LD I +E + ++ IP  +PLVYELD+E++P++          Y+LA+ +++  A+K
Sbjct:    4 LVLLRHGQSTWNKENKFTGWTDVDLTERGVEEAKRAGQLLKQHGFV--FDMAYTSYLKRAIRTLWIVLDEMDLMWIPEFKTWRLNERHYGALQGLNKAEMAAKVGEEQVHIWRRSYDVRPPALEKSDPRWPGNDPKYKELSEEELP-------LTESLKDTVERVLPYWHNEIAPSIKAGKRVIISASGNSLRALVKYLDNISDEEIPQLNIPTGIPLVYELDSELKPIKH---------YYLASEEELEKAIK 239
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|170530 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YKM6_9STRA1.050e-213100.002,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A836CKL9_9STRA1.240e-15280.30Histidine phosphatase superfamily n=1 Tax=Tribonem... [more]
A0A6T5MY23_HETAK2.330e-8249.03Hypothetical protein n=3 Tax=Sar TaxID=2698737 Rep... [more]
A0A7S2V0B9_9STRA6.660e-7849.22Phosphoglycerate mutase n=1 Tax=Fibrocapsa japonic... [more]
GPMA_GEOSL4.770e-6644.882,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
B7GEI2_PHATC8.190e-6541.63Phosphoglycerate mutase n=2 Tax=Phaeodactylum tric... [more]
L1I6G3_GUITC2.150e-6442.13Phosphoglycerate mutase n=2 Tax=Guillardia theta T... [more]
A0A836CGX1_9STRA3.390e-6443.70Histidine phosphatase superfamily n=1 Tax=Tribonem... [more]
A0A7X7WRW4_9BACT2.470e-6342.972,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
A0A662FCC4_9ARCH7.210e-6341.342,3-bisphosphoglycerate-dependent phosphoglycerate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_74contigContig_74:200810..202291 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|170530|e_gw1.74.15.1
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
KEGG rclassRC00536
KEGG ReactionR01518
KEGG ModuleM00001,M00002,M00003
KEGG Pathwayko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko05230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map05230
KEGG koko:K01834
EC5.4.2.11
GOsGO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031
Preferred namegpmA
DescriptionBelongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
COG categoryG
Max annot lvl28221|Deltaproteobacteria
EggNOG OGsCOG0588@1|root,COG0588@2|Bacteria,1MUVE@1224|Proteobacteria,42PJM@68525|delta/epsilon subdivisions,2WKJN@28221|Deltaproteobacteria
Evalue7.82e-67
Seed ortholog243231.GSU1612
Hectar predicted targeting categoryother localisation
TranscriptId170852
TrackFilteredModels1
ProteinId170530
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170530gene_10525Tribonema minus UTEX_B_3156 geneContig_74 200810..202291 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10525_1exon_10525_1Tribonema minus UTEX_B_3156 exonContig_74 200810..201105 +
exon_10525_2exon_10525_2Tribonema minus UTEX_B_3156 exonContig_74 201703..202291 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10525CDS_10525Tribonema minus UTEX_B_3156 CDSContig_74 200810..201105 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|170530Trimin1|170530|e_gw1.74.15.1Tribonema minus UTEX_B_3156 polypeptideContig_74 200810..202291 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10525 ID=mRNA_10525|Name=jgi.p|Trimin1|170530|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=885bp|location=Sequence derived from alignment at Contig_74:200810..202291+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCATCACCAAAGTACCCTCTGCGCACGGCCCGTCCTCTCTCTCAGGCA
CGGCGAATCCACGTACAACGCGGAGGGGCGGTTCATCGGCTGGGCGGACC
CCCCGCTGACGGAGCGCGGAGAGGAGGAGGCGCGGCGGGCGGCGCACGCG
CTGCGCGAGCACGGCTTCGCCGACGCCATAGATGACATCTTTGTCAGCTA
CTTGCGGCGCAGCATCAAGTCGGGCTGGATCATTGCAGACGAGCTCGGGT
GCTCGCACGTCCCCGTGAACAGCGACTGGCGCCTGAACGAGCAGATGTAC
GGCATGCTGCAGGGGCGCCTGAAGCGCGACGTCGCGCACGAGCACGGCGT
CGACCTCACGCAGAAGTGGCGCCGCTCGTACGACATTGCGCCGCCCGCGG
TGGCGGGCGCGCGCGGCTACTTCCCCGCGGGAGATGCCAAGTACGCCGAG
CTGACAGACGACGATGCGCCGGAGTCGTGGTGCGGCAGCGCGCAGACGGA
GAGCCTCAAGGACACGCAGGCGCGCGCGTGGAGGCTGTGGAAGGAGCGCA
TCGCGCCGCGCGCGCGCGCGGGACGCACGTCGCTTGTCGTCGGCCACGGC
AACGTCATCCGCGCGATGCTCAAGCGCCTGGATGGCATCGGCAATGAGCG
CCTGCGCGAGGTCTGCATCCCGCGGGCCGTTCCGCTGGTGTACGAGCTGG
ACGCTGAGATGCGCCCTGTGCGCTCCGCGTACGCCTTCGGCGCGCTGTCG
GGGTACTTCCTCGCGAACCCTAAGCAGATCGCCGCCGCGCTCAAGATCGA
GTCCACGGAGGCGCAGCTCGGCCTGCGCGCGGGCGCGGACCCCGGGGAGA
CGAGCAGCAGCAGCGGCTCGTTCGCCGCAAGTTGA
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protein sequence of jgi.p|Trimin1|170530

>Trimin1|170530|e_gw1.74.15.1 ID=Trimin1|170530|e_gw1.74.15.1|Name=jgi.p|Trimin1|170530|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=295bp
MHHQSTLCARPVLSLRHGESTYNAEGRFIGWADPPLTERGEEEARRAAHA
LREHGFADAIDDIFVSYLRRSIKSGWIIADELGCSHVPVNSDWRLNEQMY
GMLQGRLKRDVAHEHGVDLTQKWRRSYDIAPPAVAGARGYFPAGDAKYAE
LTDDDAPESWCGSAQTESLKDTQARAWRLWKERIAPRARAGRTSLVVGHG
NVIRAMLKRLDGIGNERLREVCIPRAVPLVYELDAEMRPVRSAYAFGALS
GYFLANPKQIAAALKIESTEAQLGLRAGADPGETSSSSGSFAAS*
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mRNA from alignment at Contig_74:200810..202291+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10525 ID=mRNA_10525|Name=jgi.p|Trimin1|170530|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1482bp|location=Sequence derived from alignment at Contig_74:200810..202291+ (Tribonema minus UTEX_B_3156 )
ATGCATCACCAAAGTACCCTCTGCGCACGGCCCGTCCTCTCTCTCAGGCA
CGGCGAATCCACGTACAACGCGGAGGGGCGGTTCATCGGCTGGGCGGACC
CCCCGCTGACGGAGCGCGGAGAGGAGGAGGCGCGGCGGGCGGCGCACGCG
CTGCGCGAGCACGGCTTCGCCGACGCCATAGATGACATCTTTGTCAGCTA
CTTGCGGCGCAGCATCAAGTCGGGCTGGATCATTGCAGACGAGCTCGGGT
GCTCGCACGTCCCCGTGAACAGCGACTGGCGCCTGAACGAGCAGATGTGA
GCGGTCTGTCGAGGTGGATGTTAAATGCGCGTTGTCACTGCACAGCGCAG
GCGCTGCCACAGGTACCTATGCGTGTCTGGGTGCAGTGCCTCCAGCAGCT
TGTGCAGAGCCAGGAGAAGTCAGCCTGTGGCCCTCAGGCCACCAGTGAAT
ATGCATCGCTGCACGGCCACGTCACAGCGCCTGCACTTTCTGGGACACCT
TCGAGCTGCTTCAATGCTGCTCGTCTCGGTCGCAATGTTTCTCAAGGCGG
ACAAGCGCTGTACGCGCCGGACCGCTTAGTTTCACAGTCTCATCTGCGTG
CAATGCGCTGTAGTTTCCGCCATGTCGTTATTGTAGCGCTCGTGCGCTGC
AAGACGCTTTGTGCACATTCTGCACGCAGTCATGAGCCGCGCCTTGCAGC
TCGCGCACCTTGCAGCTCGGGCGCGCACTGCAGCAGGTCTGCCTGTTGGC
GTGCGTGCACACGCCCTCGTCACTGCCCGTCCCACCGCTCTCGCGCGGTC
ATGCCGCACGGCCGCTACTGTATGTAGCTGCCCGCGCGCATCGCTCACGA
CGCGCGCGGCCCTCCCGCCTCCCTCCCGCGCCGCGCCGCGCAGGTACGGC
ATGCTGCAGGGGCGCCTGAAGCGCGACGTCGCGCACGAGCACGGCGTCGA
CCTCACGCAGAAGTGGCGCCGCTCGTACGACATTGCGCCGCCCGCGGTGG
CGGGCGCGCGCGGCTACTTCCCCGCGGGAGATGCCAAGTACGCCGAGCTG
ACAGACGACGATGCGCCGGAGTCGTGGTGCGGCAGCGCGCAGACGGAGAG
CCTCAAGGACACGCAGGCGCGCGCGTGGAGGCTGTGGAAGGAGCGCATCG
CGCCGCGCGCGCGCGCGGGACGCACGTCGCTTGTCGTCGGCCACGGCAAC
GTCATCCGCGCGATGCTCAAGCGCCTGGATGGCATCGGCAATGAGCGCCT
GCGCGAGGTCTGCATCCCGCGGGCCGTTCCGCTGGTGTACGAGCTGGACG
CTGAGATGCGCCCTGTGCGCTCCGCGTACGCCTTCGGCGCGCTGTCGGGG
TACTTCCTCGCGAACCCTAAGCAGATCGCCGCCGCGCTCAAGATCGAGTC
CACGGAGGCGCAGCTCGGCCTGCGCGCGGGCGCGGACCCCGGGGAGACGA
GCAGCAGCAGCGGCTCGTTCGCCGCAAGTTGA
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Coding sequence (CDS) from alignment at Contig_74:200810..202291+

>mRNA_10525 ID=mRNA_10525|Name=jgi.p|Trimin1|170530|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=885bp|location=Sequence derived from alignment at Contig_74:200810..202291+ (Tribonema minus UTEX_B_3156 )
ATGCATCACCAAAGTACCCTCTGCGCACGGCCCGTCCTCTCTCTCAGGCA
CGGCGAATCCACGTACAACGCGGAGGGGCGGTTCATCGGCTGGGCGGACC
CCCCGCTGACGGAGCGCGGAGAGGAGGAGGCGCGGCGGGCGGCGCACGCG
CTGCGCGAGCACGGCTTCGCCGACGCCATAGATGACATCTTTGTCAGCTA
CTTGCGGCGCAGCATCAAGTCGGGCTGGATCATTGCAGACGAGCTCGGGT
GCTCGCACGTCCCCGTGAACAGCGACTGGCGCCTGAACGAGCAGATGTAC
GGCATGCTGCAGGGGCGCCTGAAGCGCGACGTCGCGCACGAGCACGGCGT
CGACCTCACGCAGAAGTGGCGCCGCTCGTACGACATTGCGCCGCCCGCGG
TGGCGGGCGCGCGCGGCTACTTCCCCGCGGGAGATGCCAAGTACGCCGAG
CTGACAGACGACGATGCGCCGGAGTCGTGGTGCGGCAGCGCGCAGACGGA
GAGCCTCAAGGACACGCAGGCGCGCGCGTGGAGGCTGTGGAAGGAGCGCA
TCGCGCCGCGCGCGCGCGCGGGACGCACGTCGCTTGTCGTCGGCCACGGC
AACGTCATCCGCGCGATGCTCAAGCGCCTGGATGGCATCGGCAATGAGCG
CCTGCGCGAGGTCTGCATCCCGCGGGCCGTTCCGCTGGTGTACGAGCTGG
ACGCTGAGATGCGCCCTGTGCGCTCCGCGTACGCCTTCGGCGCGCTGTCG
GGGTACTTCCTCGCGAACCCTAAGCAGATCGCCGCCGCGCTCAAGATCGA
GTCCACGGAGGCGCAGCTCGGCCTGCGCGCGGGCGCGGACCCCGGGGAGA
CGAGCAGCAGCAGCGGCTCGTTCGCCGCAAGTTGA
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