mRNA_10522 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|130337 vs. uniprot
Match: A0A836C9D3_9STRA (PHB domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9D3_9STRA) HSP 1 Score: 461 bits (1185), Expect = 4.260e-161 Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 1 Query: 1 RTLASYNFSHASFEDQWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEKAAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLNATL 957 RTLASYNFSHASFEDQWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEKAAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLNATL Sbjct: 1 RTLASYNFSHASFEDQWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEKAAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLNATL 319
BLAST of jgi.p|Trimin1|130337 vs. uniprot
Match: D8LIQ8_ECTSI (PHB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ8_ECTSI) HSP 1 Score: 317 bits (812), Expect = 6.000e-103 Identity = 231/303 (76.24%), Postives = 260/303 (85.81%), Query Frame = 1 Query: 40 EDQWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEKAAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLN 948 +D WPV N+ +NVCPQG RMVVERLGKL +E GWF AIP IDKIAY+VDMRER I+I PQ+AITKDNVSV+VSGNLYVQF D EKAAYGS NPLY+VRQ AQSSMR+++GELELDEILHARA+LN MI +Q AA AWG++VKRYEITEITPD QISEAMD+QAAAER+RRERVLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L G++AAQL +AKQYI+MYG+MG+ SNTMLFS+RPADV+ L+AQA+ VL+ Sbjct: 98 DDPWPVSHPNSFVNVCPQGSRMVVERLGKLSSIERPGWFIAIPVIDKIAYRVDMRERNISITPQAAITKDNVSVEVSGNLYVQFEDPEKAAYGSANPLYAVRQHAQSSMRASIGELELDEILHARAQLNSMIKDTLQSAADAWGMEVKRYEITEITPDAQISEAMDKQAAAERIRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRDAAGSDAAQLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLS 400
BLAST of jgi.p|Trimin1|130337 vs. uniprot
Match: A0A6H5K1H4_9PHAE (PHB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1H4_9PHAE) HSP 1 Score: 300 bits (769), Expect = 1.950e-96 Identity = 232/335 (69.25%), Postives = 262/335 (78.21%), Query Frame = 1 Query: 40 EDQWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYK--VDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEK------------------------------AAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLN 948 +D WPV N+ +NVCPQG RMVVERLGKL +E GWF AIP IDKIAY+ VDMRER I+I+PQ+AITKDNVSV+VSGNLYVQF D EK AAYGS NPLY+VRQ AQSSMR+++GELELDEILHARA+LN MI +Q AA AWG++VKRYEITEITPD QISEAMD+QAAAER+RRERVLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EAL G++AAQL +AKQYI+MYG+MG+ SNTMLFS+RPADV+ L+AQA+ VL+ Sbjct: 68 DDPWPVSHPNSFVNVCPQGSRMVVERLGKLSSIERPGWFIAIPVIDKIAYRKEVDMRERNISISPQAAITKDNVSVEVSGNLYVQFDDPEKTIDHASSRGWSIVPTGPITDGQSSLSTLPKAAYGSANPLYAVRQHAQSSMRASIGELELDEILHARAQLNSMIKDTLQSAADAWGMEVKRYEITEITPDAQISEAMDKQAAAERIRRERVLTAEGEKKAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEALRDTAGSDAAQLQIAKQYIDMYGEMGKSSNTMLFSDRPADVNALIAQASAVLS 402
BLAST of jgi.p|Trimin1|130337 vs. uniprot
Match: A0A4D9CZF1_9STRA (PHB domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZF1_9STRA) HSP 1 Score: 296 bits (758), Expect = 3.670e-95 Identity = 231/314 (73.57%), Postives = 264/314 (84.08%), Query Frame = 1 Query: 10 ASYNFSHASFEDQWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEKAAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLNA 951 +SY FS + +ED WP+G TNT+LNVCPQGER VVER GKLL ++ SGWF AIP +D+IAY++DMRER +AI PQ AITKDNVSV VSG LYVQFVD +AAYGS NPLY+VRQ AQS+MR+ALGELELDEILHAR++LN+MI ++QDA AWG++VKRYEITEI PD I+ AMD+QAAAER RRE V+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G +AA+L VAK+YI MYG MG +S+TMLFS+RP DV+ L AQAA L A Sbjct: 24 SSYQFS-SMYEDVWPLGSTNTILNVCPQGERFVVERFGKLLDIKESGWFLAIPYVDRIAYRIDMRERAMAIAPQPAITKDNVSVDVSGILYVQFVDPAQAAYGSYNPLYAVRQCAQSAMRAALGELELDEILHARSRLNEMIRKSIQDACTAWGMEVKRYEITEIRPDKTITHAMDKQAAAERHRRELVIKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEAQGQDAAKLQVAKEYISMYGLMGSQSHTMLFSDRPGDVNALFAQAALALQA 336
BLAST of jgi.p|Trimin1|130337 vs. uniprot
Match: A0A7S1D6A4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D6A4_CYCTE) HSP 1 Score: 286 bits (731), Expect = 5.850e-91 Identity = 217/309 (70.23%), Postives = 255/309 (82.52%), Query Frame = 1 Query: 25 SHASFEDQWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEKAAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLNA 951 S ++ +WP+ NTV N+ P+G VVER GKL VE SGWF AIP +D I+Y +D+RE+ I I PQSAIT DNVSV+VSGNL++QFVD EKAAYG+ NPLYSV Q +QS+MRSA+GE+ELDEILH R +LN MI ++QDAAM WGL+V+RYEITEITPD QI AMD+QAAAER RRE VL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L + GG EAA+LA++++Y+ MYG+MG++SNTM+F+ERPADVS LLAQA T +NA Sbjct: 73 SSSASSSRWPIRRANTVFNIVPEGHNYVVERFGKLHSVEESGWFLAIPFVDSISYVIDLREKAIDIPPQSAITGDNVSVEVSGNLFIQFVDPEKAAYGAFNPLYSVVQHSQSAMRSAIGEMELDEILHGRTRLNAMIKGSLQDAAMPWGLEVRRYEITEITPDPQIRLAMDKQAAAERDRREHVLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLIASELQKPGGTEAARLALSREYVGMYGEMGKQSNTMIFNERPADVSALLAQAVTAMNA 381
BLAST of jgi.p|Trimin1|130337 vs. uniprot
Match: A0A7S2NV15_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NV15_9STRA) HSP 1 Score: 284 bits (726), Expect = 1.330e-90 Identity = 223/321 (69.47%), Postives = 268/321 (83.49%), Query Frame = 1 Query: 1 RTLASYNFS-----HASFEDQWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEKAAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLN 948 R+L+SY+F H S E WPV TNTVLNV PQG+ MVVERLGKL ++ SG+F +P ID++AY VD+RER + I PQ+AITKDNVSV VSGN+Y+QF D E+AAYG+ +PLY+V Q AQS+MRSA+GE+ELDEILH RA+LN +I +VQDAA+AWG+ VKRYEITEI PD I AMD+QAAAER RRE+VL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + + + GGAEAA+LA+AK Y++M+G+MG KSNTM+F++RPADV+ LL+QAA ++ Sbjct: 37 RSLSSYSFEGFGGGHNSRET-WPVTKTNTVLNVVPQGKVMVVERLGKLHDIKTSGFFLGVPLIDQVAYVVDLRERALDITPQAAITKDNVSVSVSGNVYIQFTDPERAAYGAHDPLYAVMQHAQSAMRSAIGEMELDEILHERARLNTLIKGSVQDAAVAWGIDVKRYEITEIIPDEVIRVAMDKQAAAERNRREKVLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLIADQIMKPGGAEAAKLALAKDYVQMFGEMGSKSNTMMFNDRPADVNALLSQAALAIS 356
BLAST of jgi.p|Trimin1|130337 vs. uniprot
Match: A0A7S0G971_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0G971_9STRA) HSP 1 Score: 282 bits (721), Expect = 7.790e-90 Identity = 180/303 (59.41%), Postives = 224/303 (73.93%), Query Frame = 1 Query: 46 QWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEKAAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLNAT 954 +WP+ N +LNV P+G+R VVERLGKL + +SG+FFAIP D+I+Y +D+RER I I PQ+AITKDNVSVQVSGN+YVQFVD EKAAYG+ NPLY+V Q AQS+MRSA+GE+ELDEILH RA+LN +I +VQ+AA+AWGL+++RYEITEI PD I E+MD+QAAAER RRE VL XXXXXXXXXXXXXXXXXXXXXXXXXXXXX L + GG +AA+LA+A+ Y+ MYG+MG KSNTM+F++RPAD++ LLAQA+ ++AT Sbjct: 61 RWPIRKRNNILNVVPEGQRFVVERLGKLHDICHSGYFFAIPFFDQISYVIDVRERAIDIQPQAAITKDNVSVQVSGNVYVQFVDPEKAAYGANNPLYAVTQHAQSAMRSAIGEMELDEILHGRARLNTLIKGSVQEAAVAWGLEIRRYEITEIRPDEMIRESMDKQAAAERTRRELVLQAEGEKRRAELTSEGVKIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESLGIKMRAEAQAEAIAVVATQLQKAGGDDAAKLALARDYVTMYGEMGSKSNTMMFNDRPADLNALLAQASLAISAT 363
BLAST of jgi.p|Trimin1|130337 vs. uniprot
Match: A0A7S3LBD5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LBD5_9STRA) HSP 1 Score: 283 bits (723), Expect = 8.320e-90 Identity = 220/315 (69.84%), Postives = 264/315 (83.81%), Query Frame = 1 Query: 1 RTLASYNFSHASFEDQWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEKAAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVL 945 R+++ + F A+ +WPV NTVLNV PQG + VVER GKL V++SG F IP +D IAY +DMRER + I PQSAIT+DNVSV+VSGNL+V+F DAEKAAYG+ NPLYSV Q AQS+MRSA+GE+ELDEILH RA+LN MI ++Q+AA WGL+++RYEITEITPD QI AMD+QAAAER RRE+VL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LN+ GG +AAQLA+A++Y++MYG+MG++SNT+LF++RPADV+ LL QA T + Sbjct: 51 RSMSGWGFDRAN-PWRWPVTSANTVLNVVPQGHKYVVERFGKLHAVQDSGLFLGIPIVDNIAYVIDMRERALDIPPQSAITRDNVSVEVSGNLFVRFYDAEKAAYGALNPLYSVTQHAQSAMRSAIGEMELDEILHGRARLNSMIRGSLQEAAEPWGLEIRRYEITEITPDQQIRIAMDKQAAAERDRREQVLRAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAELNKAGGEQAAQLALAREYVQMYGEMGKQSNTILFNDRPADVNALLVQAMTAM 364
BLAST of jgi.p|Trimin1|130337 vs. uniprot
Match: A0A7S1VMK5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VMK5_9STRA) HSP 1 Score: 282 bits (721), Expect = 1.430e-89 Identity = 212/301 (70.43%), Postives = 252/301 (83.72%), Query Frame = 1 Query: 49 WPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEKAAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLNA 951 WPV NT+ N+ PQG+R VVER GKL ++E SG+F AIP +D I+Y +D+RER I PQSAIT+DNV+V+VSGNL++Q VD EKAAYGS NP+YSV Q AQS+MRSA+GE+ELDEILH RA+LN +I ++Q+AA+ WGL++KRYEITEITPD QI AMD+QAAAER RRE VL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E L + GGAEAA+LA+A+ Y+ MYG+MG KSNTM+F+E+P DV+ L+AQA T +NA Sbjct: 60 WPVTKINTIFNIVPQGKRYVVERFGKLHRIEGSGFFLAIPLVDNISYVIDVRERAHDIPPQSAITRDNVAVEVSGNLFIQIVDPEKAAYGSLNPIYSVTQHAQSAMRSAIGEMELDEILHGRARLNALIKGSLQEAAIPWGLEIKRYEITEITPDPQIRMAMDKQAAAERDRREHVLRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKVIAEQLEKPGGAEAARLALARDYVNMYGEMGSKSNTMIFNEKPGDVTALVAQAVTAMNA 360
BLAST of jgi.p|Trimin1|130337 vs. uniprot
Match: A0A7S4RAI5_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RAI5_9STRA) HSP 1 Score: 281 bits (718), Expect = 3.480e-89 Identity = 213/302 (70.53%), Postives = 256/302 (84.77%), Query Frame = 1 Query: 46 QWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGWFFAIPGIDKIAYKVDMRERTIAINPQSAITKDNVSVQVSGNLYVQFVDAEKAAYGSTNPLYSVRQFAQSSMRSALGELELDEILHARAKLNKMIGAAVQDAAMAWGLQVKRYEITEITPDTQISEAMDRQAAAERVRRERVLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNREGGAEAAQLAVAKQYIEMYGDMGQKSNTMLFSERPADVSHLLAQAATVLNA 951 QWP+ TNT +N+ PQG+RMVVERLGK+ + SG+FFAIP ID IAY +D+RER I I PQSAIT+DNVSV+VSGNL+V+ +D E+AAYG+ NPLY+V Q AQS+MRSA+GE+ELDEILH RA+LN +I ++Q+AA+ WGL+V+RYEITEITPD QI AMD+QAAAER RRE+VL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +N+EGG EAA+LA+A+ MYG+MGQKSNTM+F++RP D++ LL+QAA + A Sbjct: 85 QWPITKTNTFINIVPQGKRMVVERLGKMHAIHESGYFFAIPFIDHIAYVIDVRERAIDILPQSAITRDNVSVEVSGNLFVRVLDPERAAYGARNPLYAVMQHAQSAMRSAIGEMELDEILHGRARLNSLIKGSLQEAAVVWGLEVRRYEITEITPDEQIRIAMDKQAAAERDRREQVLRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISAVAAEMNKEGGVEAAKLALARDLASMYGEMGQKSNTMIFNDRPGDLTALLSQAAVAIKA 386 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|130337 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10522 ID=mRNA_10522|Name=jgi.p|Trimin1|130337|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=957bp|location=Sequence derived from alignment at Contig_74:168586..171883+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AGGACCCTCGCATCATACAACTTCAGCCACGCCTCTTTTGAAGATCAATGback to top protein sequence of jgi.p|Trimin1|130337 >Trimin1|130337|gw1.74.14.1 ID=Trimin1|130337|gw1.74.14.1|Name=jgi.p|Trimin1|130337|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=319bp RTLASYNFSHASFEDQWPVGVTNTVLNVCPQGERMVVERLGKLLKVENSGback to top mRNA from alignment at Contig_74:168586..171883+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10522 ID=mRNA_10522|Name=jgi.p|Trimin1|130337|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3298bp|location=Sequence derived from alignment at Contig_74:168586..171883+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_74:168586..171883+ >mRNA_10522 ID=mRNA_10522|Name=jgi.p|Trimin1|130337|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=957bp|location=Sequence derived from alignment at Contig_74:168586..171883+ (Tribonema minus UTEX_B_3156 )back to top |