mRNA_10471 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|349795
Unique Name	mRNA_10471
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A835YSQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSQ3_9STRA)

HSP 1 Score: 719 bits (1857), Expect = 3.820e-262
Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 1

Query:    1 MGLPLVMTELQSIKVVLRHLHPDSVDIAPMAGLLSLGLVVQTLEQRLAAVKDLVGGGERARQHRRTELPATTEVLTNNELLASILSYAGAGEFLFIAPVSKRDESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASLDDDEVRRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHALEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVCIMLMRVGGTEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPRPYKL 1062
            MGLPLVMTELQSIKVVLRHLHPDSVDIAPMAGLLSLGLVVQTLEQRLAAVKDLVGGGERARQHRRTELPATTEVLTNNELLASILSYAGAGEFLFIAPVSKRDESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASLDDDEVRRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHALEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVCIMLMRVGGTEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPRPYKL
Sbjct:    1 MGLPLVMTELQSIKVVLRHLHPDSVDIAPMAGLLSLGLVVQTLEQRLAAVKDLVGGGERARQHRRTELPATTEVLTNNELLASILSYAGAGEFLFIAPVSKRDESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASLDDDEVRRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHALEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVCIMLMRVGGTEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPRPYKL 354

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A835YMG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG8_9STRA)

HSP 1 Score: 363 bits (933), Expect = 4.760e-120
Identity = 218/458 (47.60%), Postives = 253/458 (55.24%), Query Frame = 1

Query:   31 QSIKVVLRHLHPDSVDIAPMAGLLSLGLVVQTLEQRLAAVKDLVGGGERARQHRRTELPATTEVLTNNELLASILSYAGAGEFLFIAP-------VS----------------------------------------------------------------------------------------------------KRDESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASLDDDEVRRASWALMCFDV---------EGTEHVRTLTDAAATAYSVAVLQWLQSRHALEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVCIMLMRVG-GTEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPRP 1053
            +SIKVVLRHLHPD+    PM GL SL   ++TL+QRLAAV++ VG G R RQ+RRTE  A TEVLTNNELLAS LS+ GA E+LFIAP       VS                                                                                                     + ++W   YIN L N AA WGRTSTL FLLARGQ+LFGALG  SL D E    +W L   D+         EG + V TLTDAAA A   AVL+WLQSR AL FTG+TM +AA+NA LP++ WL+AQGCPHD+ +VC  L+     T P + WV+  G GDWSPQ M  +L SA+ N TP L R LRAEGA WPEDLAE+V TEIE+V+P  ILWAVQQGCPFGRWTTEVC+ L      G AVKR LHDLGCPCACPRP
Sbjct:    6 ESIKVVLRHLHPDAAGFTPMRGLASLSAALRTLDQRLAAVQEAVGDGRR-RQYRRTESSAATEVLTNNELLASTLSFVGACEYLFIAPSRLNLALVSGEFTYVLSSLRLTARCELSSALGEAGSVEAVERMQQAGLDIEEEVLNGAAKSCDSSSLQSIWAGPLGSQELDAPRCYEIGIRLAIFGDDGSALSWLAPQLPKAQAWSPCYINILSNYAAAWGRTSTLQFLLARGQELFGALGAVSLADHE---NTWPLTDKDMDGVWTYRDEEGAKQVMTLTDAAAAADDTAVLRWLQSRRALAFTGITMQVAAANARLPSLTWLRAQGCPHDMAQVCRQLLGSRRATPPAVAWVRRYGTGDWSPQCMRGMLASAMLNGTPALARRLRAEGAPWPEDLAELVATEIEDVRPQTILWAVQQGCPFGRWTTEVCELLDDDREGGGAVKRALHDLGCPCACPRP 459

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A835Z7G5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7G5_9STRA)

HSP 1 Score: 294 bits (753), Expect = 5.190e-96
Identity = 142/238 (59.66%), Postives = 180/238 (75.63%), Query Frame = 1

Query:  361 WGRTSTLDFLLARGQQLFGALGTASLDD--DEVRRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHALEFTGMTMLMAASNAA-LPNMKWLQAQGCPHDINEVCIMLMRVGGTEP-LLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPRPYKL 1062
            WG+ +TL FLL  GQ LFG+LGT  L D  D+++  +  L   DV+GT+H RTL+D A  A   AVLQWLQSR+A++FT  TML+AA   A L N+KWL+AQGCPHDI+++C +++    T P ++ WV+SCGGGDWSPQGM  +L  AL N+TP L RWLRAEGA+WP+DLAEVVT++ + +  S ILWA+QQGCPFGRWTT+VC  L +SH  G AVKR LHDLGCPCACPRP+K+
Sbjct:    2 WGQITTLQFLLEGGQALFGSLGTFCLSDVKDDMQYKACCLFR-DVDGTQHARTLSDTATMANDAAVLQWLQSRNAVQFTSKTMLVAADGGAVLANLKWLRAQGCPHDIDKICQIVLDTPWTPPPVMAWVRSCGGGDWSPQGMTDMLAKALLNNTPALARWLRAEGAQWPKDLAEVVTSKADILISSNILWALQQGCPFGRWTTQVCGLLEKSHDSGGAVKRALHDLGCPCACPRPHKI 238

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A836CKN3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN3_9STRA)

HSP 1 Score: 302 bits (773), Expect = 9.280e-96
Identity = 151/275 (54.91%), Postives = 184/275 (66.91%), Query Frame = 1

Query:  235 ELLASILSYAGAGEFL-FIAPVSKRDESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASLDDDEVRRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHALEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVC-IMLMRVGGTEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPRP 1053
            E+  S+  +   G  L ++A   +R  +WPA +IN +CN AA W    TL FLLARG  LFG LGT  L D      + AL+  D+ GTEHV T+ DAAA A +  VLQWL S+HA EFT +TM  AASNA LP++KWL  QGC +DIN++  ++L+ V  T P + WV+S GGGDWSPQGM  +L +AL   TPGL RWLR EGA WP++LA++V      VKP  ILWAVQ GCPFGRWTT VC+ L  S   G AVKR LHDLGCPCACPRP
Sbjct:  197 EIGVSLARFGDDGSCLSWLAAQLRRPSAWPAHFINEVCNLAAMWANIPTLQFLLARGPALFGTLGTLFLSDIRSTLPNDALVFVDLGGTEHVLTVVDAAAMAANPTVLQWLHSQHAAEFTSITMQEAASNAVLPSLKWLHQQGCAYDINQILQLVLVSVYVTPPAVAWVRSFGGGDWSPQGMTDMLATALLRSTPGLARWLRVEGAPWPQNLAQLVNRAGNYVKPLTILWAVQHGCPFGRWTTRVCERLESSSASGGAVKRALHDLGCPCACPRP 471

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A835YQJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQJ6_9STRA)

HSP 1 Score: 276 bits (706), Expect = 7.940e-89
Identity = 153/316 (48.42%), Postives = 188/316 (59.49%), Query Frame = 1

Query:  118 VQTLEQRLAAVKDLVGGGERARQHRRTELPATTEVLTNNELLASILSYAGAGEFLFIAPVSKRDESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASL-DDDEVRRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHALEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVCIMLMRVGGTEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPRPYKL 1062
            ++TLEQ +AAVK+L+G GER RQHRRTE PAT E                                            AAQWG+ +TL FLL RGQ LFGALG  SL DDD +RR S +L   + + T+H++TL D+AA+A   AVLQWLQSRHALEFT +TM +AA+N  LP++KWL+A+GCPHDI+                           S +GM  +L  ALS  TP L RWLRAEGA+WP+DLA  V     +  P  +LWAVQQGCPFG WT+ VC+ L R + DG AVKR LHDLGCPCACPRP+ +
Sbjct:    1 MRTLEQHMAAVKNLLGSGERPRQHRRTEFPATVE--------------------------------------------AAQWGQITTLQFLLERGQALFGALGAVSLGDDDNIRRES-SLTYPNTKATKHIKTLVDSAASADDAAVLQWLQSRHALEFTPITMQVAAANTVLPSLKWLRARGCPHDIHV--------------------------SARGMTDMLAKALSEVTPALARWLRAEGAQWPKDLAAAVRKSAAQ--PLTVLWAVQQGCPFGWWTSRVCERLERRYGDGGAVKRALHDLGCPCACPRPHAI 243

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A836CDR0_9STRA (GPS domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDR0_9STRA)

HSP 1 Score: 285 bits (730), Expect = 1.570e-87
Identity = 142/268 (52.99%), Postives = 175/268 (65.30%), Query Frame = 1

Query:  283 FIAPVSKRDESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASLDD---------DEVRRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHALEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVCIMLMR---VGGTEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPR 1050
            ++AP  +   +WPA Y + LCNAAA +GR +TL+FL A G  LFG     SLDD         D +  A  + +  D   T+HV TL DAAA +   A L WLQSR  LEFTG+TM +AA    LP +KWL+A  CPHDIN +  +L++   V  T P L WV+SCGGGDWS QGM  +L  AL++ TP L  WLRAEGARWP DLAEVV T++E V+P  +LWAVQQGCPFGRW++E+C+ L       AAVK  LHDLGCPC CPR
Sbjct:  364 WLAPQLRAGTAWPAYYHHVLCNAAAMYGRLNTLEFLFAHGLTLFGEQRPVSLDDNVNAGADDDDRIVIAPPSAIYVDASATKHVVTLLDAAAMSDDAAALHWLQSRQPLEFTGVTMQLAAQWGGLPTLKWLRAHECPHDINAIASILLKSHFVVATPPKLAWVRSCGGGDWSAQGMTDMLVEALAHSTPALAHWLRAEGARWPADLAEVVRTKVEVVRPRNLLWAVQQGCPFGRWSSEICEVLSEHSAQAAAVKLALHDLGCPCTCPR 631

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A835YR45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR45_9STRA)

HSP 1 Score: 276 bits (706), Expect = 1.600e-85
Identity = 140/254 (55.12%), Postives = 169/254 (66.54%), Query Frame = 1

Query:  310 ESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFG--ALGTASLDDDEVRRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHA-LEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVC--IMLMRVGG-TEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPRP 1053
            ESWP  Y   LCNAAA +G   TL+FLL  G+QLF    L   + DD        A++  D  GT+H  TL DAAA A   +VL+WL +RH  L+FT +TM +AA    LP MKWL+AQGC HDINEV   ++ MR G  T P ++WV+SCGGGDWS QGM  +L  AL++ +P L RWLRAEGARWP DLAEVV T+   V+P  +LWAVQQGCPF  WT+EVC+ L     + AAVK  LHDLGCPC CPRP
Sbjct:  238 ESWPPHYFYVLCNAAAMFGHIGTLNFLLEHGRQLFSDQRLRLPTPDDASTWGYKGAIVFTDAHGTDHALTLVDAAAMADDASVLRWLHARHPPLQFTRITMTLAAGCGGLPTMKWLRAQGCSHDINEVAKTLLQMRQGAATPPKMEWVRSCGGGDWSAQGMTDMLVEALTHSSPALARWLRAEGARWPTDLAEVVMTKPGPVEPRTLLWAVQQGCPFDLWTSEVCEVLSERSAEAAAVKLALHDLGCPCGCPRP 491

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A836C7L6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7L6_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.350e-74
Identity = 134/212 (63.21%), Postives = 159/212 (75.00%), Query Frame = 1

Query:    1 MGLPLVMTELQSIKVVLRHLHPDSVDIAPMAGLLSLGLVVQTLEQRLAAVKDLVGGGERARQHRRTELPATTEVLTNNELLASILSYAGAGEFLFIAPVSKRDESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASLDDDEVRRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHALEFTGMTMLMAASNAALPN 636
            M LP+VMTELQSI+ VLRHLHPD+  IAPM GLLSL   ++ LEQR AAV+D VG GER     R E PAT EVL +NELL +ILS+ G G FLF+AP+ +  ESWP+ YINALCN AA WGR ++LDFLL RGQQLFGALGT S D   ++ A  +L   D + TEH  TLTDAAA A ++AVLQWLQSRHALEFT +TM +AAS+A LP+
Sbjct:  195 MELPIVMTELQSIQAVLRHLHPDAEGIAPMRGLLSLTATLRILEQRSAAVQDAVGNGERPCCRMRAESPATAEVLMSNELLTTILSFVGPGNFLFVAPLPQA-ESWPSCYINALCNEAAMWGRINSLDFLLTRGQQLFGALGTISADSQLIQ-AFPSLKFVDAKDTEHTMTLTDAAAAADNIAVLQWLQSRHALEFTNITMPVAASDAVLPD 404

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A836CE86_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE86_9STRA)

HSP 1 Score: 239 bits (609), Expect = 3.340e-72
Identity = 125/254 (49.21%), Postives = 160/254 (62.99%), Query Frame = 1

Query:  313 SWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASLDD-----DEVRRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHALEFTGMTMLMAASNAA-LPNMKWLQAQGCPHDINEVCIMLMRV---GGTEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCD----SLVRSHPDGAAVKRTLHDLGCP 1035
            +WP  Y++ LCN AA  G   TL+FL+ARG+ LFG     +L D     D  R     L+  D +G EH+  L DAAA      VL+WL SR  L+FT +TM +AA+    LP +KWL AQGCPHDINEVC  LMR    G   P+L+WV+SCGGGDWS QGM  +L  AL++ TP L RWLRAEGA+WP DL++VV  +++ V P  +LWA+QQGCPFGRWT E+      +LV  +  G AV  T+  +  P
Sbjct:  109 TWPPYYVHILCNVAAVHGYVDTLEFLMARGRWLFGDQRALTLSDLADLADRWRSDIGTLIHVDTDGDEHIVALVDAAAAFSDATVLRWLHSRQPLQFTSITMKVAAARGGGLPTLKWLYAQGCPHDINEVCEGLMRCNLSGVAPPMLEWVRSCGGGDWSAQGMTSMLVEALAHMTPTLARWLRAEGAQWPADLSDVVVAKVDSVHPRNLLWAIQQGCPFGRWTFELSTPVERALVEFNLGGCAVYATVEIVVTP 362

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A835ZG85_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG85_9STRA)

HSP 1 Score: 241 bits (614), Expect = 5.200e-72
Identity = 126/255 (49.41%), Postives = 162/255 (63.53%), Query Frame = 1

Query:  313 SWPARYINALCNAAAQWGRTSTLDFLLA--RGQQLFGALGTASLDDDEVRRASWA----LMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHA-LEFTGMTMLMAASNAALPNMKWLQAQGCPHDINEVCIMLMRVG-GTEPLLDWVQSCGGGDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVKPSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPRP 1053
            SWPA + NALCN AA++G  +TL FLL+  +GQ LFG L   SL   + R  S A    L   D+ G  HV +L DAAA  Y  +VL WL+S      FT +TM  AA    +P ++WL+A GCPHDIN +C  L+     T P ++WV++C GGDWSP+G+A +L +AL   TP L RWLR +GA WP++LA +V      VK  M+LWAV++GCPFGRW++EVC   V + P   A K  LHDLGCPC CPRP
Sbjct:  221 SWPAHFTNALCNTAARYGCITTLRFLLSPTQGQLLFGPLTALSLAYVKSRSCSSAMRDALRYTDITGKAHVMSLVDAAALGYCASVLAWLRSEQPNFNFTSITMEAAAYWGWMPALEWLRAHGCPHDINTICTALLHSAIATPPHMEWVRACNGGDWSPRGVADMLVTALMCGTPTLARWLRQQGAPWPKNLAGIVKVLGGSVKVHMVLWAVREGCPFGRWSSEVC--AVLTSPQAMAAKHALHDLGCPCDCPRP 473

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A835Z1J9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1J9_9STRA)

HSP 1 Score: 1579 bits (4088), Expect = 0.000e+0
Identity = 1429/1429 (100.00%), Postives = 1429/1429 (100.00%), Query Frame = 1

Query:    1 MTFTFIMPYATRSRAKNYITGTLGFGGAPSGALDVIVVQHRRNKDHGTDGDATTLLLASTPFHVRFAQGAAAAADTATRATILLAVDSRPVPLTARLGAAGEAFFTGGCGXXXXXXXXXXXXXXXXXXXERAVTAADFTSDASCEYSSGDDADSNAYHALVASXXXXXXXXXXXXXXXXXXPDMRDSRESSSCEPGLDASSSGVXXXXXXXXXXXXXXXXXXXXXXXTYGALPTRRHSPGGAGTGYQRASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAVPTGALSTVSEDASQETWYPCQACHNCGAPYAWQQXXXXXXXXXXXXXXXXXXIGGRTDSLLSLGGFHTPCGSMTDLSGFEIAMGGGPLSSLRFQNYPPSGSLSASHTPPAWGAHAPPAYSQAAGAGTGVYRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPALSLCGAAVTAGSAADAPGAWAAFCDAAVSWEAFAARAPCTAAXXXXXXXXXXXXXXXXXXXXXXAIPCHLCASLPGCNAELLADPRLRVLVDGRILDLTAALPHVVAAAAFGRPLLAHGGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGGHYHGDSCSSSDNEDFGAARGDVEAQDAASAXXXXXXXXXXSDGIDGDDRGDSYSSGARSXXXXXXXXGDVVADEDGHAGVGPVSDGTGGDAAGVEMGLEGAGGSSGVNSGSXXXXXXXXXXXXXLPQTCTSXXXXXXXXXXXGSGDPLRVTMGAERSSTESDGTTVDESALAAADAAAXLXXXXXXXXXXXXXXXXLLSDGETEQAAPALSEEHSQRDATADVSAADDAADNAHGGAAAEPDAALPLAAAAAAPSADTADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVQAGGWWGVGWLADRLGKSSWGGGRWRXXXXXXXXXXXXXXXXGGQRADAVPELAAAAVTIHTLIQTLNLRPGANTVQLSLVLSAAADAXXXXXXXXXXXXXXXXXXXXXXXXVAAATTLETVTARVFLWDAGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAALSQASHRLLKLEESVLSFYVGNVLXXXXXXXXXXXXTVTACVFLXXXXXXXXXXXXXNAAAADLYSVLFRHGYHVAXXXXXXXXXXXXXXXXXXVRIGGGGGKRARGAQNAAVAADSPVLRSPGVLFGADQAGKGKGYSGEESQAAFALAALAGLRGLFPQGSNPFHAGFCASHAEAATLAEVGVPEGRIFRVDSASTVTTANRTFRKTWAEMAKMSGEIFPPQSXXXXXXXXXXXXALAPIGDAYSDLNFWRTPPPQLLDADAADLC 4287
            MTFTFIMPYATRSRAKNYITGTLGFGGAPSGALDVIVVQHRRNKDHGTDGDATTLLLASTPFHVRFAQGAAAAADTATRATILLAVDSRPVPLTARLGAAGEAFFTGGCGXXXXXXXXXXXXXXXXXXXERAVTAADFTSDASCEYSSGDDADSNAYHALVASXXXXXXXXXXXXXXXXXXPDMRDSRESSSCEPGLDASSSGVXXXXXXXXXXXXXXXXXXXXXXXTYGALPTRRHSPGGAGTGYQRASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAVPTGALSTVSEDASQETWYPCQACHNCGAPYAWQQXXXXXXXXXXXXXXXXXXIGGRTDSLLSLGGFHTPCGSMTDLSGFEIAMGGGPLSSLRFQNYPPSGSLSASHTPPAWGAHAPPAYSQAAGAGTGVYRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPALSLCGAAVTAGSAADAPGAWAAFCDAAVSWEAFAARAPCTAAXXXXXXXXXXXXXXXXXXXXXXAIPCHLCASLPGCNAELLADPRLRVLVDGRILDLTAALPHVVAAAAFGRPLLAHGGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGGHYHGDSCSSSDNEDFGAARGDVEAQDAASAXXXXXXXXXXSDGIDGDDRGDSYSSGARSXXXXXXXXGDVVADEDGHAGVGPVSDGTGGDAAGVEMGLEGAGGSSGVNSGSXXXXXXXXXXXXXLPQTCTSXXXXXXXXXXXGSGDPLRVTMGAERSSTESDGTTVDESALAAADAAAXLXXXXXXXXXXXXXXXXLLSDGETEQAAPALSEEHSQRDATADVSAADDAADNAHGGAAAEPDAALPLAAAAAAPSADTADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVQAGGWWGVGWLADRLGKSSWGGGRWRXXXXXXXXXXXXXXXXGGQRADAVPELAAAAVTIHTLIQTLNLRPGANTVQLSLVLSAAADAXXXXXXXXXXXXXXXXXXXXXXXXVAAATTLETVTARVFLWDAGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAALSQASHRLLKLEESVLSFYVGNVLXXXXXXXXXXXXTVTACVFLXXXXXXXXXXXXXNAAAADLYSVLFRHGYHVAXXXXXXXXXXXXXXXXXXVRIGGGGGKRARGAQNAAVAADSPVLRSPGVLFGADQAGKGKGYSGEESQAAFALAALAGLRGLFPQGSNPFHAGFCASHAEAATLAEVGVPEGRIFRVDSASTVTTANRTFRKTWAEMAKMSGEIFPPQSXXXXXXXXXXXXALAPIGDAYSDLNFWRTPPPQLLDADAADLC
Sbjct:    1 MTFTFIMPYATRSRAKNYITGTLGFGGAPSGALDVIVVQHRRNKDHGTDGDATTLLLASTPFHVRFAQGAAAAADTATRATILLAVDSRPVPLTARLGAAGEAFFTGGCGXXXXXXXXXXXXXXXXXXXERAVTAADFTSDASCEYSSGDDADSNAYHALVASXXXXXXXXXXXXXXXXXXPDMRDSRESSSCEPGLDASSSGVXXXXXXXXXXXXXXXXXXXXXXXTYGALPTRRHSPGGAGTGYQRASRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHAVPTGALSTVSEDASQETWYPCQACHNCGAPYAWQQXXXXXXXXXXXXXXXXXXIGGRTDSLLSLGGFHTPCGSMTDLSGFEIAMGGGPLSSLRFQNYPPSGSLSASHTPPAWGAHAPPAYSQAAGAGTGVYRLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPALSLCGAAVTAGSAADAPGAWAAFCDAAVSWEAFAARAPCTAAXXXXXXXXXXXXXXXXXXXXXXAIPCHLCASLPGCNAELLADPRLRVLVDGRILDLTAALPHVVAAAAFGRPLLAHGGSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGGHYHGDSCSSSDNEDFGAARGDVEAQDAASAXXXXXXXXXXSDGIDGDDRGDSYSSGARSXXXXXXXXGDVVADEDGHAGVGPVSDGTGGDAAGVEMGLEGAGGSSGVNSGSXXXXXXXXXXXXXLPQTCTSXXXXXXXXXXXGSGDPLRVTMGAERSSTESDGTTVDESALAAADAAAXLXXXXXXXXXXXXXXXXLLSDGETEQAAPALSEEHSQRDATADVSAADDAADNAHGGAAAEPDAALPLAAAAAAPSADTADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVQAGGWWGVGWLADRLGKSSWGGGRWRXXXXXXXXXXXXXXXXGGQRADAVPELAAAAVTIHTLIQTLNLRPGANTVQLSLVLSAAADAXXXXXXXXXXXXXXXXXXXXXXXXVAAATTLETVTARVFLWDAGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAALSQASHRLLKLEESVLSFYVGNVLXXXXXXXXXXXXTVTACVFLXXXXXXXXXXXXXNAAAADLYSVLFRHGYHVAXXXXXXXXXXXXXXXXXXVRIGGGGGKRARGAQNAAVAADSPVLRSPGVLFGADQAGKGKGYSGEESQAAFALAALAGLRGLFPQGSNPFHAGFCASHAEAATLAEVGVPEGRIFRVDSASTVTTANRTFRKTWAEMAKMSGEIFPPQSXXXXXXXXXXXXALAPIGDAYSDLNFWRTPPPQLLDADAADLC 1429

[Close]

BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A835YS40_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS40_9STRA)

HSP 1 Score: 105 bits (261), Expect = 1.980e-19
Identity = 69/90 (76.67%), Postives = 70/90 (77.78%), Query Frame = 1

Query: 4021 LAEVGVPEGRIFRVDSASTVTTANRTFRKTWAEMAKMSGEIFPP-QSXXXXXXXXXXXXALAPIGDAYSDLNFWRTPPPQLLDADAADLC 4287
            LAEVGVPEGRIF                 TWA+MAKMSGEIFPP QSXXXXXXXXXXXXALAPIGDAYSD NFWRTPPP LLDADAADLC
Sbjct:  473 LAEVGVPEGRIF----------------STWADMAKMSGEIFPPRQSXXXXXXXXXXXXALAPIGDAYSDFNFWRTPPPPLLDADAADLC 546

[Close]

BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: B6AG00_CRYMR (Phosphatidate phosphatase n=2 Tax=Cryptosporidium TaxID=5806 RepID=B6AG00_CRYMR)

HSP 1 Score: 64.3 bits (155), Expect = 1.600e-6
Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 1

Query: 3829 DSPVLRSPGVLFGADQAGKGKGYSGEESQAAFALAALAGLRGLFPQGSNPFHAGFCASHAEAATLAEVGVPEGRIFRVDSASTVTTANRTFRKTWAEMAKMSGEIFPP 4152
            D PV  SP  LF +      K    + +   F +AAL  +R LFP   NP +AGF     +    + VGVPEG+IF +D+  T+   NRT+ KT+  M ++   +FPP
Sbjct:  486 DGPVFLSPDRLFPSF-----KREVIDRTPYIFKIAALRDIRNLFPIYRNPLYAGFGNRDTDYRAYSHVGVPEGKIFIIDTKGTLHHINRTYTKTYETMTEIVEYMFPP 588

[Close]

BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A0G4GYM5_VITBC (Phosphatidate phosphatase n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GYM5_VITBC)

HSP 1 Score: 64.3 bits (155), Expect = 1.690e-6
Identity = 38/124 (30.65%), Postives = 56/124 (45.16%), Query Frame = 1

Query: 3922 FALAALAGLRGLFPQGSNPFHAGFCASHAEAATLAEVGVPEGRIFRVDSASTVTTANRTFRKTWAEMAKMSGEIFPP---------QSXXXXXXXXXXXXALAPIGDAYSDLNFWRTPPPQLLD 4266
            F +AAL  +RGLF Q  NPF+AGF    ++      VGVPE ++F +D+   +   N T+ +T+  M ++  E+FP           +                  D +S  NFWR P   L D
Sbjct:  612 FKIAALRDIRGLFSQEHNPFYAGFGNRESDYRAYTSVGVPEAKVFIIDTKGLIHHCNTTYARTYQTMRQIVHEMFPSVRGGEEDAHAAAAGDDRDKDQGQESPSADDQFSSFNFWRVPVEPLDD 735

[Close]

BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: UPI00067D6C36 (phosphatidate phosphatase LPIN2 n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067D6C36)

HSP 1 Score: 63.5 bits (153), Expect = 3.270e-6
Identity = 41/126 (32.54%), Postives = 62/126 (49.21%), Query Frame = 1

Query: 3904 EESQAAFALAALAGLRGLFPQGSNPFHAGFCASHAEAATLAEVGVPEGRIFRVDSASTVT-TANRTFRKTWAEMAKMSGEIFPPQSXXXXXXXXXXXXALAPIGDAYSDLNFWRTPPPQLLDADAA 4278
            E+    F +  LA ++ LFPQGSNPF+AG+     +      VG+P  RIF ++    +     +TF+ T++ M+ M  ++FPP              AL    D YS+  +WR P P  +D  AA
Sbjct:  860 EKKPEEFKIQCLADIKALFPQGSNPFYAGYGNRVNDVCAYQAVGIPIVRIFTINYKGELKHELTQTFQSTYSHMSVMVDQVFPP--------------ALCEPSDEYSNTVYWREPLPT-VDLPAA 970

[Close]

BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A7S1P8D9_9ALVE (Hypothetical protein (Fragment) n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1P8D9_9ALVE)

HSP 1 Score: 60.1 bits (144), Expect = 1.320e-5
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 1

Query: 3922 FALAALAGLRGLFPQGSNPFHAGFCASHAEAATLAEVGVPEGRIFRVDSASTVTTANRTFRKTWAEMAKMSGEIFP 4149
            F +AAL  +RGLF Q  NPF+AGF    ++      VGVPE ++F +D+   +   N T+ +T+  M ++  E+FP
Sbjct:  203 FKIAALRDIRGLFSQEHNPFYAGFGNRESDYRAYTSVGVPEAKVFIIDTKGLIHHCNTTYARTYQTMRQIVHEMFP 278

[Close]

BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A7AT25_BABBO (Phosphatidate phosphatase n=1 Tax=Babesia bovis TaxID=5865 RepID=A7AT25_BABBO)

HSP 1 Score: 61.2 bits (147), Expect = 1.330e-5
Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = 1

Query: 3922 FALAALAGLRGLFPQGSNPFHAGFCASHAEAATLAEVGVPEGRIFRVDSASTVTTANRTFRKTWAEMAKMSGEIFPP 4152
            F + AL  +R LFP G NPF+AGF  + ++      VGVPE R+F ++S+  +   N T  +T+  M+ +S  +FPP
Sbjct:  527 FKIPALRDIRNLFPPGHNPFYAGFGNNESDHRAYVSVGVPENRVFIINSSGIIRHVNSTDARTYQGMSDISELMFPP 603

[Close]

BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A3S2TLG4_CHISP (Phosphatidate phosphatase n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A3S2TLG4_CHISP)

HSP 1 Score: 60.8 bits (146), Expect = 2.160e-5
Identity = 36/120 (30.00%), Postives = 58/120 (48.33%), Query Frame = 1

Query: 3904 EESQAAFALAALAGLRGLFPQGSNPFHAGFCASHAEAATLAEVGVPEGRIFRVDSASTVT-TANRTFRKTWAEMAKMSGEIFPPQSXXXXXXXXXXXXALAPIGDAYSDLNFWRTPPPQL 4260
            E+    F +  LA ++ LFPQGSNPF+AG+     +      VG+P  RIF ++    +     +TF+ T++ M+ +  ++FPP              AL    D +S   +WR P P +
Sbjct:  832 EKKPEEFKIQCLADIKALFPQGSNPFYAGYGNRVNDVCAYQAVGIPIVRIFTINYKGELKHELTQTFQSTYSHMSVLVDQVFPP--------------ALCEPSDEFSQTMYWREPLPTI 937

[Close]

BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: U6MDQ0_EIMMA (Phosphatidate phosphatase n=3 Tax=Eimeria TaxID=5800 RepID=U6MDQ0_EIMMA)

HSP 1 Score: 60.5 bits (145), Expect = 2.480e-5
Identity = 29/78 (37.18%), Postives = 48/78 (61.54%), Query Frame = 1

Query: 3922 FALAALAGLRGLFPQGSNPFHAGFCASHAEAATLAEVGVPEGRIFRVDSASTVT-TANRTFRKTWAEMAKMSGEIFPP 4152
            F +AAL  +R LFP   NPF+AGF    ++      VG+PE +IF +D+A  +   +N T+ +T+  M++++  +FPP
Sbjct:  559 FKIAALRDIRSLFPANRNPFYAGFGNRESDHRAYIHVGIPEAKIFIIDTAGVIHHISNSTYARTYETMSEIADHMFPP 636

[Close]

BLAST of jgi.p|Trimin1|349795 vs. uniprot
Match: A0A7E5VV08_TRINI (Phosphatidate phosphatase n=5 Tax=Noctuidae TaxID=7100 RepID=A0A7E5VV08_TRINI)

HSP 1 Score: 60.5 bits (145), Expect = 2.860e-5
Identity = 36/120 (30.00%), Postives = 58/120 (48.33%), Query Frame = 1

Query: 3904 EESQAAFALAALAGLRGLFPQGSNPFHAGFCASHAEAATLAEVGVPEGRIFRVDSASTVT-TANRTFRKTWAEMAKMSGEIFPPQSXXXXXXXXXXXXALAPIGDAYSDLNFWRTPPPQL 4260
            E+    F +  LA ++ LFPQGSNPF+AG+     +      VG+P  RIF ++    +     +TF+ T++ M+ +  ++FPP              A     D +S   FWR P P++
Sbjct:  862 EKKPEEFKIQCLADIKALFPQGSNPFYAGYGNRVNDVCAYQTVGIPIVRIFTINYKGELKHELTQTFQSTYSHMSVLVDQVFPP--------------AQCEPSDEFSQTVFWRQPLPEI 967

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|349795 vs. uniprot
BLAST of jgi.p|Trimin1|349795 vs. uniprot

BLAST of jgi.p|Trimin1|349795 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24


Match Name	E-value	Identity	Description
A0A835YSQ3_9STRA	3.820e-262	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YMG8_9STRA	4.760e-120	47.60	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z7G5_9STRA	5.190e-96	59.66	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CKN3_9STRA	9.280e-96	54.91	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YQJ6_9STRA	7.940e-89	48.42	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CDR0_9STRA	1.570e-87	52.99	GPS domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A835YR45_9STRA	1.600e-85	55.12	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836C7L6_9STRA	1.350e-74	63.21	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CE86_9STRA	3.340e-72	49.21	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZG85_9STRA	5.200e-72	49.41	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

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BLAST of jgi.p|Trimin1|349795 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19


Match Name	E-value	Identity	Description
A0A835Z1J9_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YS40_9STRA	1.980e-19	76.67	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
B6AG00_CRYMR	1.600e-6	37.04	Phosphatidate phosphatase n=2 Tax=Cryptosporidium ...	[more]
A0A0G4GYM5_VITBC	1.690e-6	30.65	Phosphatidate phosphatase n=2 Tax=Vitrella brassic...	[more]
UPI00067D6C36	3.270e-6	32.54	phosphatidate phosphatase LPIN2 n=1 Tax=Amyelois t...	[more]
A0A7S1P8D9_9ALVE	1.320e-5	38.16	Hypothetical protein (Fragment) n=1 Tax=Vitrella b...	[more]
A7AT25_BABBO	1.330e-5	38.96	Phosphatidate phosphatase n=1 Tax=Babesia bovis Ta...	[more]
A0A3S2TLG4_CHISP	2.160e-5	30.00	Phosphatidate phosphatase n=1 Tax=Chilo suppressal...	[more]
U6MDQ0_EIMMA	2.480e-5	37.18	Phosphatidate phosphatase n=3 Tax=Eimeria TaxID=58...	[more]
A0A7E5VV08_TRINI	2.860e-5	30.00	Phosphatidate phosphatase n=5 Tax=Noctuidae TaxID=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_49	contig	Contig_49:529188..530701 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|349795\|estExt_Genemark1.C_Ctg_490052
Hectar predicted targeting category	other localisation
TranscriptId	350117
Track	FilteredModels1
ProteinId	349795

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349795	gene_10471	Tribonema minus UTEX_B_3156	gene	Contig_49 529188..530701 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_10471_2	exon_10471_2	Tribonema minus UTEX_B_3156	exon	Contig_49 529188..529972 -
exon_10471_1	exon_10471_1	Tribonema minus UTEX_B_3156	exon	Contig_49 530396..530701 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_10471	UTR3_10471	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_49 529188..529213 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_10471	CDS_10471	Tribonema minus UTEX_B_3156	CDS	Contig_49 530396..530701 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|349795	Trimin1\|349795\|estExt_Genemark1.C_Ctg_490052	Tribonema minus UTEX_B_3156	polypeptide	Contig_49 529214..530701 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_49:529188..530701-
coding sequence from alignment at Contig_49:529188..530701-

spliced messenger RNA

>mRNA_10471 ID=mRNA_10471|Name=jgi.p|Trimin1|349795|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1091bp|location=Sequence derived from alignment at Contig_49:529188..530701- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGATTGCCACTTGTGATGACGGAGCTCCAGAGCATCAAAGTGGTGCT
GCGCCATCTTCATCCCGACAGTGTCGACATCGCGCCAATGGCGGGCCTTT
TGAGCCTGGGCCTCGTGGTGCAGACGCTGGAGCAACGCTTGGCAGCCGTC
AAGGACTTGGTGGGTGGCGGCGAACGCGCCAGGCAGCACAGGCGCACGGA
ACTACCAGCAACAACAGAGGTGCTCACGAACAACGAGCTGCTTGCCAGCA
TCCTGTCATACGCAGGCGCTGGTGAGTTCCTTTTCATCGCGCCTGTCAGC
AAGAGGGATGAGTCGTGGCCAGCGCGCTACATCAATGCCCTCTGCAATGC
AGCTGCCCAGTGGGGTCGTACTAGCACTCTGGACTTCCTGCTAGCGCGTG
GTCAGCAGCTGTTCGGTGCCTTAGGGACAGCGTCCCTCGATGATGACGAA
GTAAGACGGGCATCATGGGCGCTGATGTGCTTTGACGTCGAAGGCACGGA
GCACGTCAGGACGCTCACAGACGCCGCCGCTACCGCCTACAGTGTCGCAG
TGCTTCAGTGGCTTCAGTCACGGCACGCACTCGAGTTCACCGGCATGACC
ATGCTAATGGCCGCTTCCAACGCTGCGTTGCCCAACATGAAGTGGCTGCA
AGCGCAGGGGTGCCCGCACGACATCAATGAGGTTTGCATAATGCTCATGC
GCGTGGGAGGCACGGAACCACTGCTAGACTGGGTCCAAAGTTGCGGCGGA
GGCGACTGGAGCCCTCAAGGCATGGCACGCTTGCTGAGAAGCGCTCTGTC
GAACGATACTCCGGGCCTTCCGCGCTGGCTGCGTGCGGAAGGGGCGCGGT
GGCCAGAGGACCTGGCCGAGGTGGTAACCACAGAAATCGAGGAGGTAAAG
CCATCGATGATTCTGTGGGCAGTGCAGCAGGGCTGCCCTTTCGGACGTTG
GACCACTGAGGTGTGCGACTCGCTGGTGCGCAGCCACCCTGATGGTGCAG
CAGTCAAGCGCACGCTGCATGACCTCGGGTGTCCCTGCGCGTGCCCACGT
CCCTACAAGTTGTGAATGGCAACTTTTGTGCGTTTGGCGCG

protein sequence of jgi.p|Trimin1|349795

>Trimin1|349795|estExt_Genemark1.C_Ctg_490052 ID=Trimin1|349795|estExt_Genemark1.C_Ctg_490052|Name=jgi.p|Trimin1|349795|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=355bp
MGLPLVMTELQSIKVVLRHLHPDSVDIAPMAGLLSLGLVVQTLEQRLAAV
KDLVGGGERARQHRRTELPATTEVLTNNELLASILSYAGAGEFLFIAPVS
KRDESWPARYINALCNAAAQWGRTSTLDFLLARGQQLFGALGTASLDDDE
VRRASWALMCFDVEGTEHVRTLTDAAATAYSVAVLQWLQSRHALEFTGMT
MLMAASNAALPNMKWLQAQGCPHDINEVCIMLMRVGGTEPLLDWVQSCGG
GDWSPQGMARLLRSALSNDTPGLPRWLRAEGARWPEDLAEVVTTEIEEVK
PSMILWAVQQGCPFGRWTTEVCDSLVRSHPDGAAVKRTLHDLGCPCACPR
PYKL*

mRNA from alignment at Contig_49:529188..530701-

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_10471 ID=mRNA_10471|Name=jgi.p|Trimin1|349795|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1514bp|location=Sequence derived from alignment at Contig_49:529188..530701- (Tribonema minus UTEX_B_3156 )
ATGGGATTGCCACTTGTGATGACGGAGCTCCAGAGCATCAAAGTGGTGCT
GCGCCATCTTCATCCCGACAGTGTCGACATCGCGCCAATGGCGGGCCTTT
TGAGCCTGGGCCTCGTGGTGCAGACGCTGGAGCAACGCTTGGCAGCCGTC
AAGGACTTGGTGGGTGGCGGCGAACGCGCCAGGCAGCACAGGCGCACGGA
ACTACCAGCAACAACAGAGGTGCTCACGAACAACGAGCTGCTTGCCAGCA
TCCTGTCATACGCAGGCGCTGGTGAGTTCCTTTTCATCGCGCCTGTCAGC
AAGAGGGTACGTGCTCTCTACACGGCATTGGTGGCGTCTACTCGTGCGAT
TGCATCAGTGCACTCGACAGAATGCAAGGCCGCGATGCAGTCGCAGTCAA
GGCTCCAAATTGCTCTGGCTAGCGCAGGGTTCGCCGATGCATTGCCGTCT
CTCAGCGACGCCAAGCAGGTTGACCTTTGCGTAGCGTTGGGGGAACTGGG
TTCCGCAGAGCTGGTGGAGCATATGCAGCTGGCAGGGTGTAATGTAAGCG
CTGATGTGCTCCTAGGTGCAGCAAAGACGTGCAACGCCACTTGCTTGCAC
GATATATGGGCAGGCCCGCTCGGCAGGTCTGAGCTAGATGTAGAAGACTG
TTTTGACATAGGGATGCAGCTCGCCGAATCTGGCGGTGATGGCTTGGCCT
TCTCATGGCTTGTGCCACGCCTGCCCGAGGATGAGTCGTGGCCAGCGCGC
TACATCAATGCCCTCTGCAATGCAGCTGCCCAGTGGGGTCGTACTAGCAC
TCTGGACTTCCTGCTAGCGCGTGGTCAGCAGCTGTTCGGTGCCTTAGGGA
CAGCGTCCCTCGATGATGACGAAGTAAGACGGGCATCATGGGCGCTGATG
TGCTTTGACGTCGAAGGCACGGAGCACGTCAGGACGCTCACAGACGCCGC
CGCTACCGCCTACAGTGTCGCAGTGCTTCAGTGGCTTCAGTCACGGCACG
CACTCGAGTTCACCGGCATGACCATGCTAATGGCCGCTTCCAACGCTGCG
TTGCCCAACATGAAGTGGCTGCAAGCGCAGGGGTGCCCGCACGACATCAA
TGAGGTTTGCATAATGCTCATGCGCGTGGGAGGCACGGAACCACTGCTAG
ACTGGGTCCAAAGTTGCGGCGGAGGCGACTGGAGCCCTCAAGGCATGGCA
CGCTTGCTGAGAAGCGCTCTGTCGAACGATACTCCGGGCCTTCCGCGCTG
GCTGCGTGCGGAAGGGGCGCGGTGGCCAGAGGACCTGGCCGAGGTGGTAA
CCACAGAAATCGAGGAGGTAAAGCCATCGATGATTCTGTGGGCAGTGCAG
CAGGGCTGCCCTTTCGGACGTTGGACCACTGAGGTGTGCGACTCGCTGGT
GCGCAGCCACCCTGATGGTGCAGCAGTCAAGCGCACGCTGCATGACCTCG
GGTGTCCCTGCGCGTGCCCACGTCCCTACAAGTTGTGAATGGCAACTTTT
GTGCGTTTGGCGCG

Coding sequence (CDS) from alignment at Contig_49:529188..530701-

>mRNA_10471 ID=mRNA_10471|Name=jgi.p|Trimin1|349795|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1065bp|location=Sequence derived from alignment at Contig_49:529188..530701- (Tribonema minus UTEX_B_3156 )
ATGGGATTGCCACTTGTGATGACGGAGCTCCAGAGCATCAAAGTGGTGCT
GCGCCATCTTCATCCCGACAGTGTCGACATCGCGCCAATGGCGGGCCTTT
TGAGCCTGGGCCTCGTGGTGCAGACGCTGGAGCAACGCTTGGCAGCCGTC
AAGGACTTGGTGGGTGGCGGCGAACGCGCCAGGCAGCACAGGCGCACGGA
ACTACCAGCAACAACAGAGGTGCTCACGAACAACGAGCTGCTTGCCAGCA
TCCTGTCATACGCAGGCGCTGGTGAGTTCCTTTTCATCGCGCCTGTCAGC
AAGAGGGATGAGTCGTGGCCAGCGCGCTACATCAATGCCCTCTGCAATGC
AGCTGCCCAGTGGGGTCGTACTAGCACTCTGGACTTCCTGCTAGCGCGTG
GTCAGCAGCTGTTCGGTGCCTTAGGGACAGCGTCCCTCGATGATGACGAA
GTAAGACGGGCATCATGGGCGCTGATGTGCTTTGACGTCGAAGGCACGGA
GCACGTCAGGACGCTCACAGACGCCGCCGCTACCGCCTACAGTGTCGCAG
TGCTTCAGTGGCTTCAGTCACGGCACGCACTCGAGTTCACCGGCATGACC
ATGCTAATGGCCGCTTCCAACGCTGCGTTGCCCAACATGAAGTGGCTGCA
AGCGCAGGGGTGCCCGCACGACATCAATGAGGTTTGCATAATGCTCATGC
GCGTGGGAGGCACGGAACCACTGCTAGACTGGGTCCAAAGTTGCGGCGGA
GGCGACTGGAGCCCTCAAGGCATGGCACGCTTGCTGAGAAGCGCTCTGTC
GAACGATACTCCGGGCCTTCCGCGCTGGCTGCGTGCGGAAGGGGCGCGGT
GGCCAGAGGACCTGGCCGAGGTGGTAACCACAGAAATCGAGGAGGTAAAG
CCATCGATGATTCTGTGGGCAGTGCAGCAGGGCTGCCCTTTCGGACGTTG
GACCACTGAGGTGTGCGACTCGCTGGTGCGCAGCCACCCTGATGGTGCAG
CAGTCAAGCGCACGCTGCATGACCTCGGGTGTCCCTGCGCGTGCCCACGT
CCCTACAAGTTGTGA