mRNA_10460 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|167243
Unique NamemRNA_10460
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|167243 vs. uniprot
Match: A0A835YR08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR08_9STRA)

HSP 1 Score: 516 bits (1329), Expect = 1.940e-185
Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 1 
Query:    1 MEHPQRPFLSDQYGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRSTPPMLQMLAAYAYLRLPCPAHQPAIPDEMRSLIESVRLTHKPTLSA 738
            MEHPQRPFLSDQYGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRSTPPMLQMLAAYAYLRLPCPAHQPAIPDEMRSLIESVRLTHKPTLSA
Sbjct:    1 MEHPQRPFLSDQYGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRSTPPMLQMLAAYAYLRLPCPAHQPAIPDEMRSLIESVRLTHKPTLSA 246
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BLAST of jgi.p|Trimin1|167243 vs. uniprot
Match: A0A835Z6H5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H5_9STRA)

HSP 1 Score: 387 bits (993), Expect = 1.570e-132
Identity = 181/226 (80.09%), Postives = 204/226 (90.27%), Query Frame = 1 
Query:   37 YGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRSTPPMLQMLAAYAYLRLPCPAHQPAIPDEMRSLIESVRL 714
            YGVSICW+G +LLMYAGTTGS+YSNHLYAFD+RT+GV KVST+G CPSRRYKHESF+V+D MY+ GGG FAPTE CM+I++L+LRSL W+QV V+ DTS  RTA SCCVDP TLKVWVFGGFD DNTRLQAFQNYDLTSNEW VVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFND+WQYRIRSTPP LQMLAA+A LRLP  A QP++PDE+ SLIE+V++
Sbjct:  127 YGVSICWYGRMLLMYAGTTGSKYSNHLYAFDARTSGVAKVSTTGVCPSRRYKHESFVVNDDMYVFGGGCFAPTEGCMFISRLDLRSLEWKQVDVEGDTSVARTAVSCCVDPETLKVWVFGGFDADNTRLQAFQNYDLTSNEWNVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDIWQYRIRSTPPTLQMLAAHALLRLPRLACQPSLPDEIHSLIEAVKV 352
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BLAST of jgi.p|Trimin1|167243 vs. uniprot
Match: A0A835ZA21_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA21_9STRA)

HSP 1 Score: 387 bits (993), Expect = 1.860e-132
Identity = 183/234 (78.21%), Postives = 208/234 (88.89%), Query Frame = 1 
Query:   37 YGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRSTPPMLQMLAAYAYLRLPCPAHQPAIPDEMRSLIESVRLTHKPTLSA 738
            YGVSICW+G +LLMYAGTTG EY NHLYAFDS T+ VVKVST+G CPSRRYKHESFI+DD MY+ GGG FAPTE CM+I++LNLRSL W+QV+VQNDTS PRTAFSCC+DP TLKVWVFGGFD DNTRLQAFQ YD+   +WE V +VCSP +RAFHSMIY+QGSL+LMLGANGKRKFNDVWQYRIRSTPP LQMLAA+A+LRLP  A +PAIPDEM+SLIESVRLT KP++S+
Sbjct:  127 YGVSICWYGRMLLMYAGTTGLEYCNHLYAFDSLTSSVVKVSTTGVCPSRRYKHESFILDDDMYVFGGGCFAPTEGCMFISRLNLRSLEWKQVQVQNDTSIPRTAFSCCMDPETLKVWVFGGFDADNTRLQAFQCYDMQLRKWENVASVCSPPSRAFHSMIYSQGSLFLMLGANGKRKFNDVWQYRIRSTPPSLQMLAAHAFLRLPHSACRPAIPDEMQSLIESVRLTRKPSISS 360
[Close]
BLAST of jgi.p|Trimin1|167243 vs. uniprot
Match: A0A835Z2J9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J9_9STRA)

HSP 1 Score: 374 bits (959), Expect = 2.290e-126
Identity = 177/230 (76.96%), Postives = 200/230 (86.96%), Query Frame = 1 
Query:   37 YGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRSTPPMLQMLAAYAYLRLPCPAHQPAIPDEMRSLIESVRLTHKP 726
            YGVSICW+G ILLMYAGTTG EY NHLYAF+S  + VVKVST+G CPSRRYKHESFI++D MY+ GGG FAPTE CM+I++LNLRSL W+Q+ V  DTS  RTAFSCC DP TLKVWVFGGFD DNTRLQAFQ+YD+ S +WE V +VCSP +RAFHSMIY+QGSL+LMLGANGKRKFNDVWQYRIRSTPP LQMLAA+A+LRLP  A +PAIPDEM+SLIESVRLT KP
Sbjct:  191 YGVSICWYGRILLMYAGTTGLEYCNHLYAFNSLASSVVKVSTTGICPSRRYKHESFILNDNMYVFGGGCFAPTEGCMFISRLNLRSLEWKQLHVDGDTSVARTAFSCCADPETLKVWVFGGFDADNTRLQAFQSYDMQSRKWENVASVCSPPSRAFHSMIYSQGSLFLMLGANGKRKFNDVWQYRIRSTPPSLQMLAAHAFLRLPHSACRPAIPDEMQSLIESVRLTRKP 420
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BLAST of jgi.p|Trimin1|167243 vs. uniprot
Match: A0A836CDJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ9_9STRA)

HSP 1 Score: 355 bits (912), Expect = 1.110e-120
Identity = 167/177 (94.35%), Postives = 170/177 (96.05%), Query Frame = 1 
Query:   37 YGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRK 567
            YGVSICWHGHILLMYAGTTGSEY NHLYAFD R AGVVKVSTSGSCPSRRYKHES IVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDP TLKVWVFGGFD DNTR+QAFQNYDLTSNEW+VVQTVCSPDARAFHS+IY QGSLYLMLGANGKRK
Sbjct:  127 YGVSICWHGHILLMYAGTTGSEYCNHLYAFDLRIAGVVKVSTSGSCPSRRYKHESVIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPETLKVWVFGGFDADNTRIQAFQNYDLTSNEWKVVQTVCSPDARAFHSVIYAQGSLYLMLGANGKRK 303
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BLAST of jgi.p|Trimin1|167243 vs. uniprot
Match: A0A835YN69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN69_9STRA)

HSP 1 Score: 270 bits (689), Expect = 3.510e-86
Identity = 128/227 (56.39%), Postives = 163/227 (71.81%), Query Frame = 1 
Query:   37 YGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRSTPPMLQMLAAYAYLRLPCPAHQPAIPDEMRSLIESVRLT 717
            YGVS+CW+   LLMY G+TG  YS+ LYAF  +T  V K+ TSG  PS RYK E F+VD+ +Y+ GGG+FAP    M + +LNL SL W  ++ +ND STPR AFSCCVD  T K W+FGGF V N RLQAFQ +D+  N W  VQT+CSP  RAFHSM+  +GSL L+LG++G + F+DVW++ IRSTPP LQMLAA A+++L   A  PA+P E+R LIE+VR T
Sbjct:  130 YGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAENDISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDVQTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPTAESPAVPHELRVLIETVRRT 356
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BLAST of jgi.p|Trimin1|167243 vs. uniprot
Match: A0A836CD99_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD99_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.120e-72
Identity = 118/229 (51.53%), Postives = 156/229 (68.12%), Query Frame = 1 
Query:   37 YGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQND-TSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTV---CSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRSTPPMLQMLAAYAYLRLPCPAHQPAIPDEMRSLIESVR 711
            YGVSICWHG  LL++ GT+G EY   LYAF   T  +V+V+TSG  PS+RYKH SF+  + MY+ GGG+F+PTE  M +++LNL +LVWQ++    +  S  RTA +CC D  + K WVFGGFD D  RLQAFQ +D+ SN W  V  V    SP  RAFHSM+  +G+L++ LGA+G   ++DVW+Y IRSTPP LQ LA  A+L LP       +P EMR+LI++V+
Sbjct:  126 YGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEVGGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFLTLPGGECPHGVPGEMRTLIDAVK 354
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BLAST of jgi.p|Trimin1|167243 vs. uniprot
Match: A0A835ZAI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI9_9STRA)

HSP 1 Score: 214 bits (544), Expect = 5.530e-68
Identity = 100/106 (94.34%), Postives = 101/106 (95.28%), Query Frame = 1 
Query:  313 KVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRSTPPMLQMLAA 630
            KVQNDTS PRTAFSCCVDP TLKVWVFGGFD DNTRLQAFQNYDLTSNEW VVQTVCSPDARAFHSMIYTQGSLYLMLGANGK+KFNDVWQYRIRSTPP LQMLAA
Sbjct:    1 KVQNDTSIPRTAFSCCVDPETLKVWVFGGFDADNTRLQAFQNYDLTSNEWNVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKKKFNDVWQYRIRSTPPTLQMLAA 106
[Close]
BLAST of jgi.p|Trimin1|167243 vs. uniprot
Match: A0A835Z6E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E7_9STRA)

HSP 1 Score: 209 bits (531), Expect = 8.900e-64
Identity = 98/141 (69.50%), Postives = 114/141 (80.85%), Query Frame = 1 
Query:   37 YGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNE 459
            YGVSICW+G +LLMYAGT G EY NHLYAF S T+ V+KVST+G CPS  YKHESF V+D MY+ GGG FAPTE  M+I+ L+LRSL W+QV+VQNDTS PRTAFS CV P T KVWVFGGFD DNT LQ+FQ+YD+ S +
Sbjct:  127 YGVSICWYGRMLLMYAGTAGLEYCNHLYAFHSLTSSVIKVSTTGVCPSIWYKHESFAVNDDMYVFGGGCFAPTEGRMFISWLDLRSLEWKQVQVQNDTSIPRTAFSSCVGPETSKVWVFGGFDADNTCLQSFQSYDMLSRK 267
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BLAST of jgi.p|Trimin1|167243 vs. uniprot
Match: A0A835Z4J3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4J3_9STRA)

HSP 1 Score: 198 bits (504), Expect = 2.200e-59
Identity = 96/219 (43.84%), Postives = 136/219 (62.10%), Query Frame = 1 
Query:   28 SDQYGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVVKVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQND--TSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLTSNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRSTPPMLQMLAAYAYLR--LPCPAHQPA 672
            +  YG S CWHG  L+++ G+TG  Y + +Y  D RT  V  + T G  PS+RYKHE+FI+++ MYI  GG F P+   M ++ L+L +  W    V  +     PR A +CCVDP T  +WVFGGFD +  RL AFQ YD     W  V T  +P ARAF+SM++ +G ++L++G+NG  +FNDVW+Y +R+TP  LQ LA  + ++  LP  A+ PA
Sbjct:   59 TSTYGASACWHGDNLIVFGGSTGMSYLDTVYVCDRRTGNVRLLKTHGQRPSKRYKHEAFIMENFMYIFAGGDFKPSMHNMDMHMLDLCTCTWHVATVAPEGVVPVPRCACACCVDPTTATLWVFGGFDANTDRLAAFQTYDTRKCSWSSVVTPQNPPARAFNSMVFREGVIWLLIGSNGGARFNDVWRYAVRTTPSSLQTLACNSIVKHGLPVTANVPA 277
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|167243 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YR08_9STRA1.940e-185100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6H5_9STRA1.570e-13280.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZA21_9STRA1.860e-13278.21Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z2J9_9STRA2.290e-12676.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDJ9_9STRA1.110e-12094.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YN69_9STRA3.510e-8656.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CD99_9STRA2.120e-7251.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZAI9_9STRA5.530e-6894.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6E7_9STRA8.900e-6469.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z4J3_9STRA2.200e-5943.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_49contigContig_49:362394..363134 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|167243|e_gw1.49.144.1
BRITEko00000,ko04131
KEGG koko:K20285
Descriptionnitrile biosynthetic process
COG categoryP
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0379@1|root,KOG0379@2759|Eukaryota
Evalue1.29e-45
Seed ortholog2880.D7FP90
Hectar predicted targeting categoryother localisation
TranscriptId167565
TrackFilteredModels1
ProteinId167243
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167243gene_10460Tribonema minus UTEX_B_3156 geneContig_49 362394..363134 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10460_1exon_10460_1Tribonema minus UTEX_B_3156 exonContig_49 362394..363134 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10460CDS_10460Tribonema minus UTEX_B_3156 CDSContig_49 362394..363134 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|167243Trimin1|167243|e_gw1.49.144.1Tribonema minus UTEX_B_3156 polypeptideContig_49 362394..363134 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10460 ID=mRNA_10460|Name=jgi.p|Trimin1|167243|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_49:362394..363134+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGAGCATCCCCAGAGGCCTTTCCTTTCGGATCAGTATGGTGTTTCGAT
CTGCTGGCATGGTCATATACTGCTCATGTACGCAGGCACAACGGGGTCAG
AGTACTCTAACCACTTGTATGCATTTGATTCAAGAACTGCTGGTGTTGTA
AAGGTCAGTACATCAGGATCGTGCCCCTCTAGAAGATACAAGCATGAAAG
CTTTATTGTAGATGACTGCATGTACATCCTAGGAGGTGGCTCCTTCGCAC
CTACTGAAAGTTGCATGTATATAAACCAACTCAATTTGAGATCACTGGTG
TGGCAGCAGGTGAAAGTGCAAAATGACACTTCTACTCCGAGGACAGCCTT
TAGCTGCTGCGTGGACCCGGGGACATTGAAAGTTTGGGTGTTTGGCGGCT
TTGATGTTGATAACACTCGCTTACAAGCCTTTCAAAACTATGACTTGACA
TCAAATGAGTGGGAGGTTGTGCAGACTGTATGCAGTCCAGATGCCCGTGC
CTTTCATTCCATGATATACACCCAGGGTTCCTTGTACCTAATGCTCGGTG
CAAACGGCAAGAGAAAATTCAATGATGTTTGGCAATATCGAATTCGAAGC
ACTCCACCCATGCTGCAAATGCTGGCAGCGTACGCATACTTGAGGCTTCC
ATGCCCTGCACACCAACCAGCAATACCTGATGAGATGCGATCACTCATAG
AGTCTGTGAGACTTACACACAAGCCCACATTGTCTGCATGA
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protein sequence of jgi.p|Trimin1|167243

>Trimin1|167243|e_gw1.49.144.1 ID=Trimin1|167243|e_gw1.49.144.1|Name=jgi.p|Trimin1|167243|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=247bp
MEHPQRPFLSDQYGVSICWHGHILLMYAGTTGSEYSNHLYAFDSRTAGVV
KVSTSGSCPSRRYKHESFIVDDCMYILGGGSFAPTESCMYINQLNLRSLV
WQQVKVQNDTSTPRTAFSCCVDPGTLKVWVFGGFDVDNTRLQAFQNYDLT
SNEWEVVQTVCSPDARAFHSMIYTQGSLYLMLGANGKRKFNDVWQYRIRS
TPPMLQMLAAYAYLRLPCPAHQPAIPDEMRSLIESVRLTHKPTLSA*
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mRNA from alignment at Contig_49:362394..363134+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10460 ID=mRNA_10460|Name=jgi.p|Trimin1|167243|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=741bp|location=Sequence derived from alignment at Contig_49:362394..363134+ (Tribonema minus UTEX_B_3156 )
ATGGAGCATCCCCAGAGGCCTTTCCTTTCGGATCAGTATGGTGTTTCGAT
CTGCTGGCATGGTCATATACTGCTCATGTACGCAGGCACAACGGGGTCAG
AGTACTCTAACCACTTGTATGCATTTGATTCAAGAACTGCTGGTGTTGTA
AAGGTCAGTACATCAGGATCGTGCCCCTCTAGAAGATACAAGCATGAAAG
CTTTATTGTAGATGACTGCATGTACATCCTAGGAGGTGGCTCCTTCGCAC
CTACTGAAAGTTGCATGTATATAAACCAACTCAATTTGAGATCACTGGTG
TGGCAGCAGGTGAAAGTGCAAAATGACACTTCTACTCCGAGGACAGCCTT
TAGCTGCTGCGTGGACCCGGGGACATTGAAAGTTTGGGTGTTTGGCGGCT
TTGATGTTGATAACACTCGCTTACAAGCCTTTCAAAACTATGACTTGACA
TCAAATGAGTGGGAGGTTGTGCAGACTGTATGCAGTCCAGATGCCCGTGC
CTTTCATTCCATGATATACACCCAGGGTTCCTTGTACCTAATGCTCGGTG
CAAACGGCAAGAGAAAATTCAATGATGTTTGGCAATATCGAATTCGAAGC
ACTCCACCCATGCTGCAAATGCTGGCAGCGTACGCATACTTGAGGCTTCC
ATGCCCTGCACACCAACCAGCAATACCTGATGAGATGCGATCACTCATAG
AGTCTGTGAGACTTACACACAAGCCCACATTGTCTGCATGA
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Coding sequence (CDS) from alignment at Contig_49:362394..363134+

>mRNA_10460 ID=mRNA_10460|Name=jgi.p|Trimin1|167243|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=741bp|location=Sequence derived from alignment at Contig_49:362394..363134+ (Tribonema minus UTEX_B_3156 )
ATGGAGCATCCCCAGAGGCCTTTCCTTTCGGATCAGTATGGTGTTTCGAT
CTGCTGGCATGGTCATATACTGCTCATGTACGCAGGCACAACGGGGTCAG
AGTACTCTAACCACTTGTATGCATTTGATTCAAGAACTGCTGGTGTTGTA
AAGGTCAGTACATCAGGATCGTGCCCCTCTAGAAGATACAAGCATGAAAG
CTTTATTGTAGATGACTGCATGTACATCCTAGGAGGTGGCTCCTTCGCAC
CTACTGAAAGTTGCATGTATATAAACCAACTCAATTTGAGATCACTGGTG
TGGCAGCAGGTGAAAGTGCAAAATGACACTTCTACTCCGAGGACAGCCTT
TAGCTGCTGCGTGGACCCGGGGACATTGAAAGTTTGGGTGTTTGGCGGCT
TTGATGTTGATAACACTCGCTTACAAGCCTTTCAAAACTATGACTTGACA
TCAAATGAGTGGGAGGTTGTGCAGACTGTATGCAGTCCAGATGCCCGTGC
CTTTCATTCCATGATATACACCCAGGGTTCCTTGTACCTAATGCTCGGTG
CAAACGGCAAGAGAAAATTCAATGATGTTTGGCAATATCGAATTCGAAGC
ACTCCACCCATGCTGCAAATGCTGGCAGCGTACGCATACTTGAGGCTTCC
ATGCCCTGCACACCAACCAGCAATACCTGATGAGATGCGATCACTCATAG
AGTCTGTGAGACTTACACACAAGCCCACATTGTCTGCATGA
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