mRNA_10334 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|135775 vs. uniprot
Match: A0A836CA60_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA60_9STRA) HSP 1 Score: 312 bits (800), Expect = 1.240e-107 Identity = 155/160 (96.88%), Postives = 158/160 (98.75%), Query Frame = 1 Query: 1 KAMELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQRTLDLAQGLGFDHSHNVISGNDCGLPTKRRRVFL 480 KAMELFCGAGGLSEGAKPFVHTVLASDI+ERACKLFASNH GTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQ+TLDLAQGLGFDHSHNVIS NDCGLPTKRRRVF+ Sbjct: 1 KAMELFCGAGGLSEGAKPFVHTVLASDINERACKLFASNHRGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISVNDCGLPTKRRRVFI 160
BLAST of jgi.p|Trimin1|135775 vs. uniprot
Match: A0A835YGJ9_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGJ9_9STRA) HSP 1 Score: 321 bits (822), Expect = 7.320e-101 Identity = 157/160 (98.12%), Postives = 160/160 (100.00%), Query Frame = 1 Query: 1 KAMELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQRTLDLAQGLGFDHSHNVISGNDCGLPTKRRRVFL 480 KAMELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKG+QCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQ+TLDLAQGLGFDHSHNVISGNDCGLPTKRRRVF+ Sbjct: 607 KAMELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGLQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISGNDCGLPTKRRRVFI 766
BLAST of jgi.p|Trimin1|135775 vs. uniprot
Match: A0A835ZBI0_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBI0_9STRA) HSP 1 Score: 282 bits (721), Expect = 6.260e-87 Identity = 139/151 (92.05%), Postives = 142/151 (94.04%), Query Frame = 1 Query: 28 GGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQRTLDLAQGLGFDHSHNVISGNDCGLPTKRRRVFL 480 GG + FVHTVLASDISERACKLFASNHCGT VMPANINDR AQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQ+ LDLAQGLGFDHSHNVISGNDCGLPTKRRRVF+ Sbjct: 529 GGSARAQNRFVHTVLASDISERACKLFASNHCGTAVMPANINDRCAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQQALDLAQGLGFDHSHNVISGNDCGLPTKRRRVFI 679
BLAST of jgi.p|Trimin1|135775 vs. uniprot
Match: A0A835YZF8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF8_9STRA) HSP 1 Score: 278 bits (711), Expect = 6.880e-87 Identity = 143/162 (88.27%), Postives = 146/162 (90.12%), Query Frame = 1 Query: 1 KAMELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANIND--RSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQRTLDLAQGLGFDHSHNVISGNDCGLPTKRRRVFL 480 KAMELFCGA GLSEGAKPFV TVLASDI ERACKLFASNHCGTTVMPANIND RSAQLHIIAEA RLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIIS LQVSAA+STVRMVLLENVVGFLSTPEFQ+TLDLAQGLGFDHSHNVISGND R V + Sbjct: 28 KAMELFCGAEGLSEGAKPFVDTVLASDICERACKLFASNHCGTTVMPANINDGHRSAQLHIIAEACRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISKLQVSAAISTVRMVLLENVVGFLSTPEFQQTLDLAQGLGFDHSHNVISGNDVTKRIPHRHVVV 189
BLAST of jgi.p|Trimin1|135775 vs. uniprot
Match: A0A835ZBG8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG8_9STRA) HSP 1 Score: 206 bits (523), Expect = 1.580e-59 Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 1 Query: 1 KAMELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQV 303 KAME FCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQV Sbjct: 642 KAMERFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQV 742
BLAST of jgi.p|Trimin1|135775 vs. uniprot
Match: A0A835YYY1_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYY1_9STRA) HSP 1 Score: 187 bits (474), Expect = 6.010e-58 Identity = 87/158 (55.06%), Postives = 117/158 (74.05%), Query Frame = 1 Query: 7 MELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQRTLDLAQGLGFDHSHNVISGNDCGLPTKRRRVFL 480 ME++CGAGG + G K ++ T LA+D S+ A L+A NH V+ + N+R QL +I EA RLGVEV GGPPCT FS +GKR + +G QC++SML V AA+ ++RM +LENV+GF+STP++Q TL A+ LGF SH+V++G+DCGLPT RRRVFL Sbjct: 1 MEMYCGAGGFTHGVKEYLDTALATDFSQSARALYARNHPAARVIQGDANERGVQLALITEATRLGVEVGLGGPPCTHFSQAGKRETHEGWQCVLSMLLVHAAIPSLRMTVLENVLGFMSTPQWQHTLAAARALGFSFSHHVVTGDDCGLPTMRRRVFL 158
BLAST of jgi.p|Trimin1|135775 vs. uniprot
Match: A0A836C7I0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7I0_9STRA) HSP 1 Score: 123 bits (309), Expect = 3.330e-30 Identity = 66/79 (83.54%), Postives = 67/79 (84.81%), Query Frame = 1 Query: 1 KAMELFCGAGGLSEGAKPF--VHTVLASDISERACKLF--ASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGP 225 KAMELFCGAGGLSEGA PF V TVLASDISERAC LF ASNHCGTTVMPANINDRSA+LHI AEARRLGVEV P Sbjct: 403 KAMELFCGAGGLSEGATPFQIVDTVLASDISERACNLFQVASNHCGTTVMPANINDRSARLHISAEARRLGVEVQRWTP 481
BLAST of jgi.p|Trimin1|135775 vs. uniprot
Match: A0A835YXD3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXD3_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.410e-21 Identity = 59/159 (37.11%), Postives = 75/159 (47.17%), Query Frame = 1 Query: 4 AMELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQRTLDLAQGLGFDHSHNVISGNDCGLPTKRRRVFL 480 AME++CGAGG + GAK ++ T LA+D S+ AC +A NH V+ + N+R QL +IAEA RLGVE +Q TL A+ LGF SH+VI G+DCGLPT RRRVFL Sbjct: 2222 AMEMYCGAGGFTHGAKEYLDTALATDFSQSACARYARNHPAARVIQGDANERRVQLALIAEATRLGVE-------------------------------------------------------WQHTLGAARTLGFSFSHHVIRGDDCGLPTMRRRVFL 2325
BLAST of jgi.p|Trimin1|135775 vs. uniprot
Match: A0A835Z6Y7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Y7_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.870e-21 Identity = 57/158 (36.08%), Postives = 75/158 (47.47%), Query Frame = 1 Query: 7 MELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANINDRSAQLHIIAEARRLGVEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVGFLSTPEFQRTLDLAQGLGFDHSHNVISGNDCGLPTKRRRVFL 480 ME++CGAGG + GAK +++T LA+D S+ AC L+A NH V+ + N+R QL +IAEA RLGVE +Q TL A+ LGF SH+V+ G+DCGLPT RRVFL Sbjct: 2331 MEMYCGAGGFTHGAKEYLNTSLATDFSQSACALYARNHPAARVLQGDANERGVQLALIAEATRLGVE-------------------------------------------------------WQHTLAAARALGFSFSHHVVRGDDCGLPTMWRRVFL 2433
BLAST of jgi.p|Trimin1|135775 vs. uniprot
Match: A0A3L6JLL9_THOAR (DNA (cytosine-5-)-methyltransferase n=1 Tax=Thorarchaeota archaeon (strain OWC) TaxID=2053491 RepID=A0A3L6JLL9_THOAR) HSP 1 Score: 87.4 bits (215), Expect = 3.090e-17 Identity = 58/166 (34.94%), Postives = 89/166 (53.61%), Query Frame = 1 Query: 7 MELFCGAGGLSEGAKPFVHTVL-ASDISERACKLFASNHCGTTVMPANINDRSAQLHII--AEARRLG--VEVSSGGPPCTDFSMSGKRCSQKGIQCIISMLQVSAAVSTVRMVLLENVVG--FLSTPEFQRT-LDLAQGLGFDHSHNVISGNDCGLPTKRRRVFL 480 ++LFCGAGGLSEG + H VL A+D++ C+ + NH TV+ AN+ + + ++I E++ G + + +GGPPC FS +GKR +I V VL+ENV G ++ +T LD G+ HS V+ + G+P +RRRVF+ Sbjct: 159 VDLFCGAGGLSEGLRQAGHRVLVATDLNRHMCETYRLNHENATVVQANVLNEADTDNLIDTIESKLKGRTLNLLAGGPPCQGFSTAGKRSPSDVRNSLIFRTLVFIHKLRPENVLIENVPGIRWIRQGRLLKTMLDALTREGYHHSTLVLKAEEYGVPQRRRRVFI 324 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|135775 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_10334 ID=mRNA_10334|Name=jgi.p|Trimin1|135775|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=480bp|location=Sequence derived from alignment at Contig_63:738672..739151- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AAAGCCATGGAACTCTTTTGTGGTGCAGGGGGGCTCAGCGAGGGCGCAAAback to top protein sequence of jgi.p|Trimin1|135775 >Trimin1|135775|gw1.63.14.1 ID=Trimin1|135775|gw1.63.14.1|Name=jgi.p|Trimin1|135775|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=160bp KAMELFCGAGGLSEGAKPFVHTVLASDISERACKLFASNHCGTTVMPANIback to top mRNA from alignment at Contig_63:738672..739151- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_10334 ID=mRNA_10334|Name=jgi.p|Trimin1|135775|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=480bp|location=Sequence derived from alignment at Contig_63:738672..739151- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_63:738672..739151- >mRNA_10334 ID=mRNA_10334|Name=jgi.p|Trimin1|135775|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=480bp|location=Sequence derived from alignment at Contig_63:738672..739151- (Tribonema minus UTEX_B_3156 )back to top |