mRNA_10100 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|169463
Unique NamemRNA_10100
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A835YQS0_9STRA (Procollagen-lysine 5-dioxygenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQS0_9STRA)

HSP 1 Score: 1132 bits (2929), Expect = 0.000e+0
Identity = 662/662 (100.00%), Postives = 662/662 (100.00%), Query Frame = 1
Query:    1 SKPVLTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVLGMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAGSVVDLGEYGLGKERTLAQVHVGVCSENVGAEPM 1986
            SKPVLTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVLGMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAGSVVDLGEYGLGKERTLAQVHVGVCSENVGAEPM
Sbjct:    1 SKPVLTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVLGMPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGAGSVVDLGEYGLGKERTLAQVHVGVCSENVGAEPM 662          
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: D7FNT7_ECTSI (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNT7_ECTSI)

HSP 1 Score: 444 bits (1143), Expect = 3.850e-144
Identity = 280/597 (46.90%), Postives = 356/597 (59.63%), Query Frame = 1
Query:    1 SKPVLTPADLFVLG----ARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASI------GKELRASRLGKELGLVP-RTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHL----------GGNKGAGGGQ-LGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPL----GDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVL 1713
            S PV+TPADLF L     A   P  VVKD  +G   A  A   A  V+  G M+PAGMG     W     RGD ++W+T GI  + +    GLE +L +L+++      G  L  +     LGLV   TSVQLA YPG GRGYV+H D         T  SA+D++ + R+ +TA+YYLNPDW    GG LRVHL          GG + AG  +   G  WD+EPVLDR+VLFRS++VEHEVLP+ APR A+T+WFYGR   +    A+P+  +P S P             L A  DTR ++ PLP     G A    + IFVS+VSYRD EA PT+ DL + A  P+RV VGLV    A    +               GRV ++ M AA+AAGP WAR VA ++W+GE YVLQ DSH RFR  WD+YL+ TL+ CPS +PILTTYP GY+LP+++P G  +T+ T+L P GFG DGMLRQ  R + ++        A +PL S LWA+GF+F  S A+L +  YDP LRH FFGEEA+MAAR+FT G+DF+APPQAV YHLWTR HR SFR+N T E   E      R+R +L
Sbjct:   37 SYPVITPADLFSLSSGGFAAGSPGVVVKDGFLGREQALQAHAAALEVENRGEMKPAGMGRRDGVWHGQQSRGDSIMWITEGIRGKGE-LPEGLENLLMRLSALRGPLNDGCGLPTTSSAPGLGLVKDTTSVQLARYPGDGRGYVRHRD---------TPRSAQDSEEAERK-ITALYYLNPDWRPSMGGQLRVHLDSRPEAAAEEGGPRPAGEEEEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPASAPRLAVTLWFYGR---QLGLPASPSTRSPSSVPPLPAPEQQ-----LAAGDDTRDKVRPLPSPAGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARATNPERVSVGLVWQLEAGVAEDEAMHRATPGGKEIRGGRVRSLFMPAADAAGPSWARRVAQSIWKGEKYVLQIDSHTRFRPGWDSYLIHTLQSCPSFKPILTTYPVGYQLPHKIPAG--ETRPTLLVPDGFGPDGMLRQTGRLLLRK--------ARDPLPSPLWASGFSFSAS-AVLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQNSTKEAEAEEAAANRRLRWLL 603          
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A6H5L271_9PHAE (Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L271_9PHAE)

HSP 1 Score: 439 bits (1128), Expect = 1.170e-141
Identity = 273/574 (47.56%), Postives = 341/574 (59.41%), Query Frame = 1
Query:    7 PVLTPADLFVLG----ARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASI------GKELRASRLGKELGLVP-RTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLG-----------GGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLP----LGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRE 1650
            PVLTPADLF L     A   P  VVKD  +G   A  A   A  V+ GG M+PAGMG G   W     RGD ++W+T GI  + +    GLE +L +L ++      G  L  +     LGLV   TSVQLA YPG GRGYV+H D         T  SA+D++ + R+ +TA+YYLNPDW    GG LRVHL   + A   + G           G  WD+EPVLDR+VLFRS++VEHEVLP+ APR A+T+WFYGR   +    A+P+   P S P             L    DTR  + PLP     G A    + IFVS+VSYRD EA PT+ DL + AA P RV VGLV    A    +               GRV ++ M A EAAGP WAR VA +LW+GE YVLQ DSH RFR  WD+YL+ TL+ CPS +P+LTTYP GYE+P+++P G  +T+ T+L P GFG DGMLRQ  R + ++        A +PL S LWA+GF+F  S A+L +  YDP LRH FFGEEA+MAAR+FT G+DF+APPQAV YHLWTR HR SFR+
Sbjct:   39 PVLTPADLFSLSSGGFAAGSPGVVVKDGFLGREQALQAHAAALEVENGGKMKPAGMGRGDGVWLGQQSRGDSIMWITEGIRGKGE-LPEGLENLLMRLFALRGPLNDGCGLPTTSSATGLGLVKDTTSVQLARYPGDGRGYVRHRD---------TPRSAQDSEEAERK-ITALYYLNPDWRPSMGGQLRVHLDSRREAAAEEGGPRPAGEEEEKAGRKWDIEPVLDRLVLFRSDLVEHEVLPALAPRLAVTLWFYGR---QLGLPASPSARRPSSVPPLPAPEQQ-----LAPGDDTRDNVRPLPPPDGSGAAHAAEASIFVSVVSYRDSEANPTVVDLFARAANPGRVSVGLVWQLEAGVAEDEAMRRATPGGKEIRGGRVRSLFMPAVEAAGPSWARRVAQSLWKGEKYVLQIDSHTRFRPGWDSYLIQTLQSCPSFKPVLTTYPVGYEMPHKIPAG--ETRPTLLVPDGFGPDGMLRQTGRLLLRK--------ARDPLPSPLWASGFSFSAS-AMLVEVPYDPGLRHSFFGEEASMAARMFTRGWDFFAPPQAVVYHLWTRGHRASFRQ 582          
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A7S2SW69_9STRA (Procollagen-lysine 5-dioxygenase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW69_9STRA)

HSP 1 Score: 355 bits (912), Expect = 2.970e-110
Identity = 227/574 (39.55%), Postives = 299/574 (52.09%), Query Frame = 1
Query:  145 MRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELR---------ASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGG----GTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYG---------------------------RPPRRAAPAAAPT---MLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAP----LPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFG-ADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVLGMP 1722
            +RPA MG G   WQ    RGD L W+     D     GP L   L  +  + +EL+           +  + LGL  R S QLA YPG+G GYV+H DA      E +            R  TA++YLN  W A DGG LR+ LG   G      GG    G WDVEPV++R+++FRS+ +EHEVLP++APR A+T WFYG                           + PR+             +P +              P +A   +    +P    L + +  D  S IFVSI S+RD E   T+ DL  TA  P+R+ VG+V   G     E         LP A   RV  + MD  +A GPC ARH+A  LWRGE YVLQ DSHMRFR NWD YLL  L++CPS +P+LTTYP+GY LPN VP   ++++ T+LCP  +G ADG+LRQ  + +A +                LWAAGFNF  + A++R+  YDP L  +FFGEE +MAARL+T GYDF+APP+AV YHLWTR HRP     +  E  + +    AR++ +L +P
Sbjct:   18 LRPARMGRGLGEWQAGAKRGDELAWIHSTDED----LGPSLRGFLGVMEGLREELKHRWGCSADSRRQSSRRLGLTSRLSHQLARYPGSGEGYVRHKDAYPEAAGEES------------RLFTAIFYLNRGWSAADGGKLRLFLGEGHGPAAAGPGGAREEGVWDVEPVMNRLIIFRSHDLEHEVLPAWAPRIAVTTWFYGVLEGATPXXXXXXXXLLSSLALPSPVTKDPRKDGVGGLEVEGDQSSPTAAAHPESLLLLHHNVPTSAHPSSLPPCSPPRRSLQVSEDHDGNSTIFVSIASFRDSECQHTVLDLFRTAQYPERLTVGIV---GQYDAVEDIRCFDQAPLPLAWARRVRVLHMDWQQAEGPCLARHLAQQLWRGEDYVLQIDSHMRFRPNWDTYLLHCLQQCPSSKPVLTTYPTGYTLPNHVP---DESRPTLLCPSHYGGADGVLRQTGKLLAARQSAPIACRG-------LWAAGFNFA-AAAVIREVPYDPTLSFLFFGEEISMAARLWTHGYDFFAPPEAVVYHLWTRTHRPVRTAGKDEEHRQAKSASLARVKDMLRLP 561          
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A024UVX4_9STRA (Procollagen-lysine 5-dioxygenase n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UVX4_9STRA)

HSP 1 Score: 314 bits (804), Expect = 4.330e-94
Identity = 212/559 (37.92%), Postives = 285/559 (50.98%), Query Frame = 1
Query:   19 PADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQD---DGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXX-APLTAEGDTRAQLAP---------LPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENE 1656
            P+++F+L     P  +V++  +G A A       R ++    MRPA +  G            RGDHLLW+     D P    P ++ +L +L  +   L  ++   EL L    S QLA +PG    +V+H+D  G    + +            R +T +YYLN DW    GG LRVHL            G   D+ P+LD +V+FRS  V HEVLP+   R ALT WFYG P     P  A T+   +  P            A L       A L P         LP    PDL S IFVSI SY D E  PT+A L +TA AP RV  GL L       A+            A   +V    M  A+A GPC AR     LWRGEPY LQ DSHMRFR+ WD +L+  L +C SPR ILTTYP GY LPN++       + T+LC   F ++G++RQ ++ +            ++P+ S+ WAAGF F  +  +L++  YDP+L H+FFGEE  MAARL+T GYDF+AP +AV YHLW+R+HRP+FR+++
Sbjct:   90 PSEVFLLRQPDSPGFIVRENFLGAAQATRVLDACRALRESMPMRPAQVAVGKMNQVTALVTDARGDHLLWLPHDDKDVP----PPVQHLLVQLGRLAHGL--AKAAPELALRNAKSTQLAIFPGNNTRFVQHVDTYGSKKDQLS------------RRITCLYYLNADWQPSHGGALRVHL----------KDGSHEDIPPLLDSLVVFRSADVMHEVLPTTVDRLALTTWFYGGPTPSDVPTTAATIPKSLGKPNTATFETIEASPATLNRSHTPDASLPPPGLCGGGMALPPPAIPDLISTIFVSIPSYCDSECQPTVAHLFATATAPSRVFAGLCLQHDEGDPAQAIAFAA------AYGDQVRVKRMHPADATGPCLARWETQQLWRGEPYYLQIDSHMRFRQGWDVFLIHELSQCSSPRAILTTYPLGYNLPNQIT---RDIRPTLLCASHFDSNGLVRQCSKVLKTSP--------SKPIPSMFWAAGFAFSRA-TVLQEVMYDPSLTHLFFGEENVMAARLWTHGYDFFAPTEAVVYHLWSRSHRPTFRDHQ 602          
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A329RXD0_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RXD0_9STRA)

HSP 1 Score: 313 bits (801), Expect = 7.640e-94
Identity = 209/556 (37.59%), Postives = 290/556 (52.16%), Query Frame = 1
Query:   13 LTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARER 1680
            L P++LF L     P  V+K+A +G   A         + A G    A +GAG     D   RGD + W    I    +   P +  + R++ ++   L+  ++  EL L    S Q A +PG G  +VKH+D     H++     ++D      R VT VYYLN  W    GG LRVHL  +K      L    WDV P LD +++FRS  VEHEV+P++  R A+T+W+YG PP  A+PA A +   PV  P             +T      A+ A             IFVSI SYRD E   T+ +LL+ A  P RV +G+ L +                    + G      +D  +AAGPC AR  A  LW+GE + LQ DSHMRFR  WD +L+  L +CPSP+PILTTYP GY LPN + +   + + T+LC   F + GMLRQ ++ +A+         + +PL S+ WAAGF F  S  ++ +  YD  LR +FFGEE++MAARL+T+G+DF+ P + V YHLWTR +RP F+E E+ ET R R
Sbjct:   69 LNPSELFALKHPESPGFVIKEAFLGRQNALAVRDALTELAASGTFHEAKVGAGQNLRSDRAVRGDKIHW----IQTPTESVSPVILHLRRQVETLVYGLK--KVSPELDLRNVVSTQFAIFPGDGARFVKHVDTYSNAHSDERGGMSKD---GLVRLVTCVYYLNDQWEPEHGGHLRVHLKASK-----LLPSCHWDVSPKLDTLMVFRSLDVEHEVMPTYRERKAVTIWYYGEPPE-ASPAIARSEALPVPRPLPS----------ITGNKSDHAERA------------SIFVSIPSYRDSECRHTVDNLLTQATFPGRVSIGICLQTDDDDDTRAYLESKYSSSKVRVHG------VDFRKAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLINELEKCPSPKPILTTYPLGYTLPNEISS---ECRPTLLCASTFDSLGMLRQTSKILAK--------ISTKPLPSLFWAAGFAFS-SSKVIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSETVVYHLWTRTYRPVFQELESDETKRYR 569          
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A485KTR2_9STRA (Procollagen-lysine 5-dioxygenase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTR2_9STRA)

HSP 1 Score: 308 bits (790), Expect = 4.730e-92
Identity = 224/588 (38.10%), Postives = 298/588 (50.68%), Query Frame = 1
Query:   13 LTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPA--GMGAGARRWQDDGY-RGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFY--------GRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAP-LPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVL-HSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMR-------FRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENE-TAETARERQRGEARIRAVL 1713
            L  +++FVL   S P  +V++  +G A A         +Q    MR A  GMG G        + RGD L+W++   +  P    P ++ +++ +  +   L   +   ELG+    S Q A +PG    +VKH+D     H               RR +T +YYLNP W    GG LRVHLG +           +WDV P LD ++LFRS  VEHEVLP+   R ALT WFY            R A PA+A    AP ++P                + D   + AP LP   +P     IFVSI S+RD E  PT+  L +TAA P RV VGL L H+    TA                 +V    M   +A GPC ARH A  LWRGE Y LQ DSHMR       FR +WDAYL+  L RC + +PILTTYP GY LPN++P+    T+ T+LC   F   G+LRQ  + +              PL    WAAGF F  +  +++   YDP+L H+FFGEE +MAARL+T GYDF+APP+AV YHLW+RAHRP F++   TAE  +E+    AR++ +L
Sbjct:   75 LNHSEVFVLRESSSPGFIVREDFLGDAPAMAVRDACLRLQQMHEMRDAEVGMGKGGDVTSHVAHARGDQLMWLSHDESQVP----PPIQHLMKHIERLVHGL--VKAAPELGIRNIRSTQFAIFPGNNTRFVKHVDTYS--HRPGL-----------RRCITCLYYLNPHWDLSHGGQLRVHLGES-----------SWDVPPRLDTLLLFRSTDVEHEVLPTTVDRLALTTWFYCNADDANIPHTTRTANPASATAAAAPKTFPRASRPPCIRSDDSQPLDVDMAPRRAPPLPTSISPSPDDTIFVSIPSFRDSECAPTLQHLFATAACPARVVVGLCLQHADDDDTAFVDKYG----------AQVRVTRMHHTDATGPCLARHAAQQLWRGERYHLQIDSHMRYESLVRSFRPHWDAYLVEQLHRCDATKPILTTYPMGYHLPNQIPS---DTRPTLLCASHFDTHGLLRQTGKVLKVSPP--------RPLPCSFWAAGFAFSEA-TVIQHVPYDPSLSHLFFGEENSMAARLWTHGYDFFAPPEAVVYHLWSRAHRPVFQDTRPTAE--KEKAASLARVQRLL 608          
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A833TAL9_PHYIN (Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TAL9_PHYIN)

HSP 1 Score: 308 bits (788), Expect = 5.830e-92
Identity = 203/558 (36.38%), Postives = 291/558 (52.15%), Query Frame = 1
Query:   13 LTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVT--GGIADQPDGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSEIFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARER 1680
            L+P+DLF L     P  VVK++ +G  +A         +   G    A +GAG     D   RGD + W+     ++   +   P +  + R++ S+   L+  ++  EL L    S Q A +PG G  +VKH+D     H       ++D      R +T VYYLN  W    GG LRVHL  +K      L    WDV P LD +++FRS  VEHEV+P++  R A+T+W+YG+P + A  +   T   P   P              T      A+ A             +FV+I SYRD E   T+ +LL+ A  P+R+ +G+ L +      +                +V    +D  EAAGPC AR  A  L++GE   LQ DSHMRFR  WD +L+  L +CPS +PILTTYP GY LPN + T   + + T+LC   F + GMLRQ ++ +A++        + +PL S+ WAAGF F  S A++ +  YD  LR +FFGEE++MAARL+T+G+DF+ P +AV YHLWTRA+RP F+E E+ +T R R
Sbjct:   69 LSPSDLFALKHPDSPGIVVKESFLGRQSALAVRDALTELATSGTFHEAKVGAGQNLRNDRMVRGDKIHWIQTPNDLSAPTESVNPAILHLRRQVESLVYGLK--KVSPELDLRNVVSTQFAVFPGDGARFVKHVDTYLNAHRNEQEGVSKD---GLVRLITCVYYLNDRWEPEHGGHLRVHLKDSK-----LLPAYHWDVPPNLDTLLVFRSLDVEHEVMPTYRERKAVTIWYYGKPSQAAPASRTETSSVPCPLPST------------TGSNSDHAEQA------------SVFVAIPSYRDSECRHTVDNLLAQATFPERISIGICLQTDDEDDTQAYLESKYST------SQVRVHWVDYREAAGPCVARRQAQKLYQGEDLYLQIDSHMRFRPGWDCFLINELEKCPSAKPILTTYPLGYTLPNEIST---ECRPTLLCASSFDSLGMLRQTSKILAKK--------STKPLPSLFWAAGFAFS-SSAIIEEVPYDETLRFLFFGEESSMAARLWTSGWDFFTPSEAVVYHLWTRAYRPVFQELESDDTKRYR 574          
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: A0A8K1FD38_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD38_PYTOL)

HSP 1 Score: 308 bits (788), Expect = 7.270e-92
Identity = 219/571 (38.35%), Postives = 305/571 (53.42%), Query Frame = 1
Query:   13 LTPADLFVLGARSGPAAVVKDALMGGA-AARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWVTGGI-ADQPDGT-GPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSE-IFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVL 1713
            L P++LFVL     P  +VKD  +G + AAR+ +   +  ++  + + AG+G G  +  +   RGD + W+       +PD T    +  +LR++  +   ++++    EL L   TS QLA +PG G  +VKH D     H      SA+ +D+  R  +T VYYLNPDW    GG LR  +   +           WDV PVLD + +FRS  VEHEVLP+F  R ALT+W+YG  P  AA A     L P               AP  A    + Q +       P  T E IFV+I SYRDPE   T+ADLL+ A  P R+ +G+ L        E           P    R+  I      AAGPC AR +A +LW+ E Y LQ DSHMRFR  WD  LLA L++CPS + ILTTYP GY LPN + +    T+  +LC  GF   GMLRQ ++ + +         A +P+ S+ WAAGF F  S  ++++  YD +LR +FFGEEA+M+ARL+T G+DF+AP +   YHLWTRA+RP F+E E+ +T + R      ++A+L
Sbjct:   91 LNPSELFVLKHPDSPGFIVKDRFLGHSDAARVRNALVQFAKSAEFHQ-AGVGYGDNKRHEQAARGDRIHWIQRPRDLTRPDATLDAAIVHLLRQVERLVVGVKSAI--PELDLRNVTSTQLAIFPGDGSRFVKHTDTYSSNHP-----SAKGSDNLVR-LITCVYYLNPDWIPAHGGSLRFFVDDKQ----------QWDVPPVLDTLAVFRSRDVEHEVLPTFHERMALTIWYYG--PASAANAPKIPQLHPA---------ISSFLAP-PAPPQVKPQAS-----TTPSSTQEMIFVAIPSYRDPECPHTVADLLAKATHPDRITIGICLQDEDDTMLEHLKETY-----PPTTVRIEWIHYS--HAAGPCVARAMAQSLWKNEQYYLQIDSHMRFRHGWDVELLAQLKQCPSEKAILTTYPLGYTLPNEISS---DTRPALLCASGFDDQGMLRQASKTLTR--------VADKPIPSLFWAAGFAFS-SADVIKEVLYDQSLRFLFFGEEASMSARLWTHGWDFFAPSEMFIYHLWTRAYRPVFQELESEDTKKSRLESLKSVKAML 606          
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Match: W2QK95_PHYPN (Procollagen-lysine 5-dioxygenase n=9 Tax=Phytophthora TaxID=4783 RepID=W2QK95_PHYPN)

HSP 1 Score: 306 bits (783), Expect = 3.220e-91
Identity = 208/575 (36.17%), Postives = 299/575 (52.00%), Query Frame = 1
Query:   13 LTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMRPAGMGAGARRWQDDGYRGDHLLWV-TGGIADQP-DGTGPGLEAVLRKLASIGKELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSSAEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTWDVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPTMLAPVSWPXXXXXXXXXXXAPLTAEGDTRAQLAPLPLGDAPDLTSE--IFVSIVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHS----GAAATAEGXXXXXXXXLPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRRNWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGFGADGMLRQRARRVAQQXXXXXXXXAAEPLRSVLWAAGFNFGPSGALLRDARYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRENETAETARERQRGEARIRAVL 1713
            L P++LF       P  V+K+A +G   A         +   G    A +GAG     D   RGD + W+ T    + P     P +  + R++ S+   LR  +   E+ L    S Q A +PG G  +VKH+D    VH +     ++D      R +T VYYLN  W    GG LRVH+  +K      L    WDV P LD +VLFRS  VEHEV+P++  R A+T+W+YG+P  +A+ A A T +  V  P                         P   G+  + T++  IFV+I SYRD E   T+ +LL+ A  P+R+ +G+ L +    G +A  +                +V    +D  +AAGPC AR  A  LW+GE + LQ DSHMRFR  WD +L++ L +CPS +PILTTYP GY LPN + T   + + T+LC   F + GMLRQ ++ ++ +        + +PL S+ WAAGF F  S  ++    YD  LR +FFGEE++M ARL+T+G+DF+ P + V YHLWTRA+RP F+E E+ ET R R      ++ +L
Sbjct:   69 LNPSELFTFKHPDSPGFVIKEAFLGHREALEVRDALTELATSGTFHDAKVGAGQNLRNDRAVRGDRIHWIQTPSDLNAPAQSIHPAILHLRRQVESLVYGLR--KASPEMDLRNIVSTQFAIFPGDGARFVKHVDTYSNVHKDERGGISKD---GLVRLITCVYYLNDQWEIEHGGYLRVHVKDSK-----HLPACHWDVPPKLDTLVLFRSRDVEHEVMPTYRERKAVTIWYYGKP-SKASSALARTEVLSVPRPL------------------------PSITGNEANHTTQPSIFVAIPSYRDSECRHTVDNLLARATFPERISIGICLQTDENDGTSAYLKSKYST----------SKVCVQWVDYRQAAGPCVARAQAQKLWQGEEFYLQIDSHMRFRPGWDCFLISELGKCPSSKPILTTYPLGYTLPNEIST---ECRPTLLCASSFDSLGMLRQTSKILSTK--------STKPLPSLFWAAGFAFS-SSKVIEQVPYDATLRFLFFGEESSMTARLWTSGWDFFTPSETVVYHLWTRAYRPVFQELESGETQRYRSASAHYVKQIL 586          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|169463 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQS0_9STRA0.000e+0100.00Procollagen-lysine 5-dioxygenase (Fragment) n=1 Ta... [more]
D7FNT7_ECTSI3.850e-14446.90Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpu... [more]
A0A6H5L271_9PHAE1.170e-14147.56Procollagen-lysine 5-dioxygenase n=1 Tax=Ectocarpu... [more]
A0A7S2SW69_9STRA2.970e-11039.55Procollagen-lysine 5-dioxygenase n=2 Tax=Rhizochro... [more]
A0A024UVX4_9STRA4.330e-9437.92Procollagen-lysine 5-dioxygenase n=2 Tax=Aphanomyc... [more]
A0A329RXD0_9STRA7.640e-9437.59Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophth... [more]
A0A485KTR2_9STRA4.730e-9238.10Procollagen-lysine 5-dioxygenase n=1 Tax=Aphanomyc... [more]
A0A833TAL9_PHYIN5.830e-9236.38Procollagen-lysine 5-dioxygenase n=1 Tax=Phytophth... [more]
A0A8K1FD38_PYTOL7.270e-9238.35Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W2QK95_PHYPN3.220e-9136.17Procollagen-lysine 5-dioxygenase n=9 Tax=Phytophth... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_64contigContig_64:194462..199501 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|169463|e_gw1.64.109.1
BRITEko00000,ko01000,ko01003
KEGG koko:K12244
EC2.4.1.229
Descriptionpeptidyl-proline hydroxylation to 4-hydroxy-L-proline
COG categoryQ
Max annot lvl2759|Eukaryota
EggNOG OGsKOG3710@1|root,KOG3710@2759|Eukaryota
Evalue6.31e-145
Seed ortholog2880.D7FNT7
Hectar predicted targeting categoryother localisation
Ec32 ortholog description[Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase, family GT60
Ec32 orthologEc-12_003420.1
TranscriptId169785
TrackFilteredModels1
ProteinId169463
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169463gene_10100Tribonema minus UTEX_B_3156 geneContig_64 194462..199501 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|169463Trimin1|169463|e_gw1.64.109.1Tribonema minus UTEX_B_3156 polypeptideContig_64 194462..199501 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10100_7exon_10100_7Tribonema minus UTEX_B_3156 exonContig_64 194462..194810 -
exon_10100_6exon_10100_6Tribonema minus UTEX_B_3156 exonContig_64 195676..195998 -
exon_10100_5exon_10100_5Tribonema minus UTEX_B_3156 exonContig_64 196594..196912 -
exon_10100_4exon_10100_4Tribonema minus UTEX_B_3156 exonContig_64 197039..197219 -
exon_10100_3exon_10100_3Tribonema minus UTEX_B_3156 exonContig_64 197343..197499 -
exon_10100_2exon_10100_2Tribonema minus UTEX_B_3156 exonContig_64 198204..198661 -
exon_10100_1exon_10100_1Tribonema minus UTEX_B_3156 exonContig_64 199300..199501 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10100CDS_10100Tribonema minus UTEX_B_3156 CDSContig_64 199300..199501 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10100 ID=mRNA_10100|Name=jgi.p|Trimin1|169463|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1989bp|location=Sequence derived from alignment at Contig_64:194462..199501- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TCGAAGCCCGTACTGACCCCTGCCGACTTGTTCGTGCTGGGAGCAAGAAG
CGGTCCCGCTGCGGTGGTGAAGGACGCGCTGATGGGCGGCGCGGCGGCGC
GCCTGGCCTCTGGTGATGCGCGGCACGTGCAGGCGGGCGGTTACATGCGG
CCCGCGGGCATGGGGGCGGGGGCGCGCCGCTGGCAGGACGACGGGTACAG
AGGCGACCACCTCCTGTGGGTGACCGGGGGCATCGCAGACCAGCCGGACG
GCACCGGGCCCGGCCTAGAAGCAGTGCTCCGCAAGCTTGCCTCCATCGGC
AAGGAACTGCGGGCCTCCCGCCTGGGTAAGGAACTGGGTCTCGTACCCAG
GACCTCGGTGCAGCTGGCGTGGTACCCGGGGGCAGGCAGGGGGTACGTCA
AGCACCTCGACGCAGACGGCGGCGTACACGCGGAGTCCACAAGCAGTTCA
GCAGAGGACACAGACAGTTCACCACGGCGCACGGTCACGGCGGTGTACTA
CCTGAACCCGGACTGGTGCGCGCGGGATGGGGGGTGCCTGAGGGTACACT
TGGGGGGCAACAAGGGGGCAGGGGGGGGACAGCTAGGGGGTGGGACGTGG
GATGTGGAGCCGGTGCTGGACAGGGTGGTGCTGTTCAGGAGCAACATTGT
GGAGCATGAGGTGCTGCCGTCGTTTGCGCCGCGCTTTGCCCTCACCATGT
GGTTCTACGGCCGGCCACCACGACGGGCGGCGCCTGCTGCAGCACCTACA
ATGCTAGCACCAGTGTCATGGCCACCAGCAGCAGCAGCACAAGCAGCAGC
AGCTGCAGCACCGCTCACGGCGGAGGGCGACACCCGCGCGCAGCTGGCGC
CGCTGCCGCTGGGCGACGCGCCCGACCTCACATCCGAGATCTTCGTCTCC
ATCGTGAGCTACCGCGACCCCGAGGCGCTGCCGACGATCGCGGACCTGCT
GAGCACTGCCGCGGCGCCGCAGCGCGTGCGCGTCGGGCTCGTGCTGCACT
CTGGCGCTGCTGCCACCGCCGAGGGCGCTGCCGCCGCCGCCGCGCTGCTG
CTGCCGCCGGCGCTGCGCGGCCGCGTCGCCACCATCGTCATGGACGCTGC
GGAGGCGGCGGGGCCGTGCTGGGCGCGGCACGTCGCGGCGGCGCTGTGGC
GCGGCGAGCCGTACGTGCTGCAGAGCGACAGCCACATGCGCTTCCGCCGC
AACTGGGATGCATATCTGCTGGCGACGCTGCGGCGGTGCCCGTCGCCGCG
ACCCATTCTGACGACGTATCCGTCGGGCTACGAGCTGCCGAACCGCGTGC
CCACAGGGCCGGAGCAGACCCAAGCCACAGTCCTCTGCCCCATGGGCTTC
GGCGCGGACGGCATGCTGCGACAGCGCGCGCGCCGCGTGGCGCAGCAGCA
GCGCGCCTCCTCCGCCGCCGCTGCCGCGGAGCCGCTGCGCAGCGTGCTCT
GGGCGGCGGGCTTCAACTTTGGTCCCTCCGGAGCGCTGCTGCGCGACGCA
CGCTACGACCCCGCGCTGCGCCATGTGTTCTTCGGCGAGGAGGCGGCGAT
GGCGGCACGTCTGTTCACCGCGGGCTACGATTTTTATGCGCCGCCGCAGG
CGGTGGCGTACCACCTGTGGACGCGCGCGCACAGGCCCAGCTTCCGCGAG
AACGAGACTGCGGAGACAGCGCGCGAGCGGCAGCGCGGCGAGGCGCGCAT
CAGGGCAGTGCTCGGCATGCCTCCCGCTGCTGCTGCTGCTGCCGCCGCTG
CTGCTGCTGGTGGTGCTGCTGCTGCTGCTGCTGCTGCGGAAAGCAGCGCT
CAGCAATGCGCCGACAGCAGCGACGAAGACGCCGATGATGGCGCTGCGCT
GCTGCCTGCTGCTGCGGCTGGCGCTGCGGGCGCTGGCAGCGTAGTAGATC
TGGGTGAATACGGCCTGGGAAAGGAGCGGACGCTGGCACAGGTACATGTG
GGCGTTTGCTCAGAAAATGTGGGCGCTGAACCTATGTGA
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protein sequence of jgi.p|Trimin1|169463

>Trimin1|169463|e_gw1.64.109.1 ID=Trimin1|169463|e_gw1.64.109.1|Name=jgi.p|Trimin1|169463|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=663bp
SKPVLTPADLFVLGARSGPAAVVKDALMGGAAARLASGDARHVQAGGYMR
PAGMGAGARRWQDDGYRGDHLLWVTGGIADQPDGTGPGLEAVLRKLASIG
KELRASRLGKELGLVPRTSVQLAWYPGAGRGYVKHLDADGGVHAESTSSS
AEDTDSSPRRTVTAVYYLNPDWCARDGGCLRVHLGGNKGAGGGQLGGGTW
DVEPVLDRVVLFRSNIVEHEVLPSFAPRFALTMWFYGRPPRRAAPAAAPT
MLAPVSWPPAAAAQAAAAAAPLTAEGDTRAQLAPLPLGDAPDLTSEIFVS
IVSYRDPEALPTIADLLSTAAAPQRVRVGLVLHSGAAATAEGAAAAAALL
LPPALRGRVATIVMDAAEAAGPCWARHVAAALWRGEPYVLQSDSHMRFRR
NWDAYLLATLRRCPSPRPILTTYPSGYELPNRVPTGPEQTQATVLCPMGF
GADGMLRQRARRVAQQQRASSAAAAAEPLRSVLWAAGFNFGPSGALLRDA
RYDPALRHVFFGEEAAMAARLFTAGYDFYAPPQAVAYHLWTRAHRPSFRE
NETAETARERQRGEARIRAVLGMPPAAAAAAAAAAAGGAAAAAAAAESSA
QQCADSSDEDADDGAALLPAAAAGAAGAGSVVDLGEYGLGKERTLAQVHV
GVCSENVGAEPM*
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mRNA from alignment at Contig_64:194462..199501-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10100 ID=mRNA_10100|Name=jgi.p|Trimin1|169463|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5040bp|location=Sequence derived from alignment at Contig_64:194462..199501- (Tribonema minus UTEX_B_3156 )
TCGAAGCCCGTACTGACCCCTGCCGACTTGTTCGTGCTGGGAGCAAGAAG CGGTCCCGCTGCGGTGGTGAAGGACGCGCTGATGGGCGGCGCGGCGGCGC GCCTGGCCTCTGGTGATGCGCGGCACGTGCAGGCGGGCGGTTACATGCGG CCCGCGGGCATGGGGGCGGGGGCGCGCCGCTGGCAGGACGACGGGTACAG AGGTGAGCAGCGCTGCCGCTGCGAGTCAGGGAGTCAGAGTCGTCGAGTCG TGCAGCCTCGTCAGGTGCTCTAGCACAGTGGAGAGCGCTGCCGCAGCGAG TCAGTGAGTCAAGAGTCGTCCAGTCATTCACCCTCGACAAGTGCTCTAGC ACAGAGGAACCACGGAAGTGTGTGTGCAAGTATGCATGCACGTGAGTAGG GGCGGCCGTGCTGGTAGCAGAGTGACACTTTCGGACATTTGTCACCTGCT GCCGCACAGCGCTGCCCTTCAAGTTCTGGCAGCGTGAGGCGCTGTGAAGG AGGCGTGGTACACCTGGGGGCGTCACCTGTTGCCGTGGAGTGCTGTTCTT CGAGTTCTGGTAGCGTGAAGTGCTGTGAACAACACAAGCGGCCGGCGGCC ATGCGGGCGGGGGCCAGGCGCTGACAGCATGCATACCATGGCCAGGATCG CGGTTCAGAGAAGGGAGGGGGAATGGGGGGTGTTGGGGGTATGTGGGGAG GGCGGGGCGGGGGGGGGTTAGGTTAGGGTTATTGGTAGGTTGAGGTTAGA GTTATGCATCGGCTGCGAACAGATCAGACATATCGCTGTCATTGAGCACG CTGTAAGCCTATGTCAAAATCTGCATCCATGTATGCGCAGGCGACCACCT CCTGTGGGTGACCGGGGGCATCGCAGACCAGCCGGACGGCACCGGGCCCG GCCTAGAAGCAGTGCTCCGCAAGCTTGCCTCCATCGGCAAGGAACTGCGG GCCTCCCGCCTGGGTAAGGAACTGGGTCTCGTACCCAGGACCTCGGTGCA GCTGGCGTGGTACCCGGGGGCAGGCAGGGGGTACGTCAAGCACCTCGACG CAGACGGCGGCGTACACGCGGAGTCCACAAGCAGTTCAGCAGAGGACACA GACAGTTCACCACGGCGCACGGTCACGGCGGTGTACTACCTGAACCCGGA CTGGTGCGCGCGGGATGGGGGGTGCCTGAGGGTACACTTGGGGGGCAACA AGGGGGCAGGGGGGGGACAGCTAGGGGGTGGGACGTGGGATGTGGAGCCG GTGCTGGACAGGGTGGTGCTGTTCAGGAGCAACATTGTGGAGCATGAGGT ATGTATGCATGCTGGCGCATACACGCATTTGGTACCTGGTGGATTGTCGA CAGCTGTGATACGTACAACTGTGAATTGTCGACAGCTGTGATACGTACAA CTGCCTTCCTTTGTTGTTTTTTGGCCAAGTCGCATCTGTTGGCAACGACA AAAGTACGCCAGGCGTGTATGTATTGTTGGTGATAACCACCACATTGCAC TTAGGTACTTCAACACTTACTTCAACCGAGTGTTGCATTCCCCATGGTCA TGATGCCAAGAGCTGCGCCCATTGTCGCAGCGTACATGGCAGCTTCCAAG CGGTGAACTCAAGGACTGGAGATGAGACATGAAACTGGGATACGAGTAGG TGCTGCCATTGAGGAATGTCGCTGTTGAACATGAACATGTCGGTGCATGC AAGTGCATGCCTCGGTTTGAGGCGCTTGTAGTCTGTGAACACACCCCAGC GCTATCACCTTCGCGCATTCGCATGAGCCTTGCGTGTCCGTGCCGCAGCG TGCAGCGTCGCACATGCCGCTGTCTTGTGCCCTGCCGCTTGCAGCACATG AGACAACGTCTGCGCGCCTGTCATCTTCTTCTCTCATTGTGCAGCAGCAC GCCGTTTCCATTGTGACAACATCTTTTTGGGAAGCGCTAGGCATTGCAGC GTCCGAACCCGAAGCTCATCACGTGCTGTCTGTGTGCCTTGGCGGCACGC AGGTGCTGCCGTCGTTTGCGCCGCGCTTTGCCCTCACCATGTGGTTCTAC GGCCGGCCACCACGACGGGCGGCGCCTGCTGCAGCACCTACAATGCTAGC ACCAGTGTCATGGCCACCAGCAGCAGCAGCACAAGCAGCAGCAGCTGCAG CACCGCTCAGTACCCTCCATGACAGCAGCGCTCACTCCCGACCCAAACCA AGCGCCACTAGCACAGCAACACGTCCGGCACTACCGACGGCAGCAGCAGC AGCAGCAGCGCCCGGTGCCGCTATGGAGGCAGCGGCGGAGGGCGACACCC GCGCGCAGCTGGCGCCGCTGCCGCTGGGCGACGCGCCCGACCTCACATCC GAGATCTTCGTCTCCATCGTGAGCTACCGCGACCCCGAGGCGCTGCCGAC GATCGCGGACCTGCTGAGCACTGCCGCGGCGCCGCAGCGCGTGCGCGTCG GGCTCGTGCTGCAGTGCGACCCGCGCGCCGACGCGCACCTGCTGCCGCCG CAGCGCGGCAGCCGCGCCGCCGCCGCCGCCGCTGCTGCCGGCGCAACGTC CCCATGCGGTGCCGCTGTCTCCGCCGCTGGCGCGAGCAGCTCTGGCGCTG CTGCCACCGCCGAGGGCGCTGCCGCCGCCGCCGCGCTGCTGCTGCCGCCG GCGCTGCGCGGCCGCGTCGCCACCATCGTCATGGACGCTGCGGAGGCGGC GGGGCCGTGCTGGGCGCGGCACGTCGCGGCGGCGCTGTGGCGCGGCGAGC CGTACGTGCTGCAGAGCGACAGCCACATGCGCTTCCGCCGCAACTGGGAT GCATATCTGCTGGCGACGCTGCGGCGGTGCCCGTCGCCGCGACCCATTCT GACGACGTATCCGTCGGGCTACGAGCTGCCGAACCGCGTGCCCACAGGGC CGGAGCAGGTGCGTGTTGAAGTGCGTGCGCGCGTAGTTTTGTGTATGTCT GTGTACTTCAACTGGATGATCGCAGGGCTCGCAGCAGAATGGTGCTGAAC CGGAAGGCCGTGCTGCACCAAAGCCGGATCTACGGATGCACGGCGTTGTA CGTTTGGCATGTGTGCTGACAAGGGTCCCGCGCTTTCTCGCAGAATCAAA GCAAGGCTACGCAATCACATCGCGCCACAGTCTTCGGGTAGTGGCAGCGC TGCAGCATGCCTCAATCGGTACTGCTGCGGCACTGTTCAGCGCGCTATTT CGCAGCGCAGCAGACTTGCGCCACCACCGTGCCACCATGCGCACTCAATG CGACTACCTCAACACCACATGATGCTCCTCTTCCTCCCCCCCCCCCCCCC CCCCCCCTCCTGCCTGTGCACCCCCTGTGCACCTCATAGCACTCTTTGTG ACTGCCTTAGAGCGACATGAAGCCTCGCCCCCCGCGCTTCCCCCTCTCCT ATCCCTCGCCGCCCCCCCCCCTTCCCACGCGCCTCTCTTCCTATCCTTCG CGCGCACACACACACACGCGCACTGTTTTCCCCTCTCCCCGCCCCTCGCG CAGACCCAAGCCACAGTCCTCTGCCCCATGGGCTTCGGCGCGGACGGCAT GCTGCGACAGCGCGCGCGCCGCGTGGCGCAGCAGCAGCGCGCCTCCTCCG CCGCCGCTGCCGCGGAGCCGCTGCGCAGCGTGCTCTGGGCGGCGGGCTTC AACTTTGGTCCCTCCGGAGCGCTGCTGCGCGACGCACGCTACGACCCCGC GCTGCGCCATGTGTTCTTCGGCGAGGAGGCGGCGATGGCGGCACGTCTGT TCACCGCGGGCTACGATTTTTATGCGCCGCCGCAGGCGGTGGCGTACCAC CTGTGGACGCGCGCGCACAGGCCCAGGTGCGGGTCGCGGTGCTGCTCTCT TCTGAGTGCTGTACATCGTACATGGCAGCTCTTTTGACTTCAAGCTGAGA GTGACGTTCCCACCTGTGGACGCGCGCGCGCAGGCCCCAGGTGCGCGCGT CGCAGTGCCGTCTGAGCGCTGCGCATGATTTGGTGACTTCAAATTTGAAG TGACATTCTCGCCTGTGGACGGGCGCGCACAGGCCCAGGTGCGCGTCGCG GCGCTGCCTGAGCGCTGTGCATTGTACAGCTTTAACCTCAAGTTTGAAGT GTTCCCACCTGTGGACGTGCTCGCACAGGCCCAGGTGGCACTCGTGCTGT GCTGCTAATTGTCTGGCCGGGGCATGTTTGTAACTGCCTTCGGTATGAAG TGTACTCCCAGGCGAGCGCTGCAAACGGTTGTTGGCGAGCAGGTGCCCGC AAGTGTCCGGGTGCACATGACGTGGTCGAGGCAAACTGCTCCTTTGCCAA AACAACTGTTTTGAGCGTTGTGCATCGTGCATATAACGTCAATTTGCAAT TTGAAGTAACGTTCCCTGCTCCAGCCCTTTCAGACGCGCTGGCTGTCAGC GGCTGCGTCTCAGGCAAGCCATGAAGCGTGCGCGCAGCGTAGTATGCAGC GCTGTCGCTGTCGCTGTTTTTGTGCACTTGGTTTTGCGCCGGCGGGCGTG CACGCAAAGCAATGTGATGCGCTCTTCACACTTCATGCCAGCAGCGGTCA TCACAGGCTTGCGCAATCGCAGCGCCGCAATCACTGCCCATCGACACAGC GGCACACGCAGGGCATATGCACACGAGTATTTCAGCCACCTCACCGTGGT TTTTTTTCTGCACATGGGTGATCTGCACTGTTTGTCCTCAGCTTCCGCGA GAACGAGACTGCGGAGACAGCGCGCGAGCGGCAGCGCGGCGAGGCGCGCA TCAGGGCAGTGCTCGGCATGCCTCCCGCTGCTGCTGCTGCTGCCGCCGCT GCTGCTGCTGGTGGTGCTGCTGCTGCTGCTGCTGCTGCGGAAAGCAGCGC TCAGCAATGCGCCGACAGCAGCGACGAAGACGCCGATGATGGCGCTGCGC TGCTGCCTGCTGCTGCGGCTGGCGCTGCGGGCGCTGGCAGCGTAGTAGAT CTGGGTGAATACGGCCTGGGAAAGGAGCGGACGCTGGCACAGGTACATGT GGGCGTTTGCTCAGAAAATGTGGGCGCTGAACCTATGTGA
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Coding sequence (CDS) from alignment at Contig_64:194462..199501-

>mRNA_10100 ID=mRNA_10100|Name=jgi.p|Trimin1|169463|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1989bp|location=Sequence derived from alignment at Contig_64:194462..199501- (Tribonema minus UTEX_B_3156 )
TCGAAGCCCGTACTGACCCCTGCCGACTTGTTCGTGCTGGGAGCAAGAAG
CGGTCCCGCTGCGGTGGTGAAGGACGCGCTGATGGGCGGCGCGGCGGCGC
GCCTGGCCTCTGGTGATGCGCGGCACGTGCAGGCGGGCGGTTACATGCGG
CCCGCGGGCATGGGGGCGGGGGCGCGCCGCTGGCAGGACGACGGGTACAG
AGGCGACCACCTCCTGTGGGTGACCGGGGGCATCGCAGACCAGCCGGACG
GCACCGGGCCCGGCCTAGAAGCAGTGCTCCGCAAGCTTGCCTCCATCGGC
AAGGAACTGCGGGCCTCCCGCCTGGGTAAGGAACTGGGTCTCGTACCCAG
GACCTCGGTGCAGCTGGCGTGGTACCCGGGGGCAGGCAGGGGGTACGTCA
AGCACCTCGACGCAGACGGCGGCGTACACGCGGAGTCCACAAGCAGTTCA
GCAGAGGACACAGACAGTTCACCACGGCGCACGGTCACGGCGGTGTACTA
CCTGAACCCGGACTGGTGCGCGCGGGATGGGGGGTGCCTGAGGGTACACT
TGGGGGGCAACAAGGGGGCAGGGGGGGGACAGCTAGGGGGTGGGACGTGG
GATGTGGAGCCGGTGCTGGACAGGGTGGTGCTGTTCAGGAGCAACATTGT
GGAGCATGAGGTGCTGCCGTCGTTTGCGCCGCGCTTTGCCCTCACCATGT
GGTTCTACGGCCGGCCACCACGACGGGCGGCGCCTGCTGCAGCACCTACA
ATGCTAGCACCAGTGTCATGGCCACCAGCAGCAGCAGCACAAGCAGCAGC
AGCTGCAGCACCGCTCACGGCGGAGGGCGACACCCGCGCGCAGCTGGCGC
CGCTGCCGCTGGGCGACGCGCCCGACCTCACATCCGAGATCTTCGTCTCC
ATCGTGAGCTACCGCGACCCCGAGGCGCTGCCGACGATCGCGGACCTGCT
GAGCACTGCCGCGGCGCCGCAGCGCGTGCGCGTCGGGCTCGTGCTGCACT
CTGGCGCTGCTGCCACCGCCGAGGGCGCTGCCGCCGCCGCCGCGCTGCTG
CTGCCGCCGGCGCTGCGCGGCCGCGTCGCCACCATCGTCATGGACGCTGC
GGAGGCGGCGGGGCCGTGCTGGGCGCGGCACGTCGCGGCGGCGCTGTGGC
GCGGCGAGCCGTACGTGCTGCAGAGCGACAGCCACATGCGCTTCCGCCGC
AACTGGGATGCATATCTGCTGGCGACGCTGCGGCGGTGCCCGTCGCCGCG
ACCCATTCTGACGACGTATCCGTCGGGCTACGAGCTGCCGAACCGCGTGC
CCACAGGGCCGGAGCAGACCCAAGCCACAGTCCTCTGCCCCATGGGCTTC
GGCGCGGACGGCATGCTGCGACAGCGCGCGCGCCGCGTGGCGCAGCAGCA
GCGCGCCTCCTCCGCCGCCGCTGCCGCGGAGCCGCTGCGCAGCGTGCTCT
GGGCGGCGGGCTTCAACTTTGGTCCCTCCGGAGCGCTGCTGCGCGACGCA
CGCTACGACCCCGCGCTGCGCCATGTGTTCTTCGGCGAGGAGGCGGCGAT
GGCGGCACGTCTGTTCACCGCGGGCTACGATTTTTATGCGCCGCCGCAGG
CGGTGGCGTACCACCTGTGGACGCGCGCGCACAGGCCCAGCTTCCGCGAG
AACGAGACTGCGGAGACAGCGCGCGAGCGGCAGCGCGGCGAGGCGCGCAT
CAGGGCAGTGCTCGGCATGCCTCCCGCTGCTGCTGCTGCTGCCGCCGCTG
CTGCTGCTGGTGGTGCTGCTGCTGCTGCTGCTGCTGCGGAAAGCAGCGCT
CAGCAATGCGCCGACAGCAGCGACGAAGACGCCGATGATGGCGCTGCGCT
GCTGCCTGCTGCTGCGGCTGGCGCTGCGGGCGCTGGCAGCGTAGTAGATC
TGGGTGAATACGGCCTGGGAAAGGAGCGGACGCTGGCACAGGTACATGTG
GGCGTTTGCTCAGAAAATGTGGGCGCTGAACCTATGTGA
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