mRNA_10096 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|82606
Unique NamemRNA_10096
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|82606 vs. uniprot
Match: A0A835YM13_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM13_9STRA)

HSP 1 Score: 409 bits (1052), Expect = 3.540e-143
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 2
Query:  134 MEVRGGAMEGKRSIVDRYMAILERRPLYTKMATNYLICFLGDVSCQAMGAGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFGAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSIAN 766
            MEVRGGAMEGKRSIVDRYMAILERRPLYTKMATNYLICFLGDVSCQAMGAGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFGAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSIAN
Sbjct:    1 MEVRGGAMEGKRSIVDRYMAILERRPLYTKMATNYLICFLGDVSCQAMGAGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFGAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSIAN 211          
BLAST of jgi.p|Trimin1|82606 vs. uniprot
Match: D7G6L5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L5_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 2.600e-43
Identity = 82/216 (37.96%), Postives = 129/216 (59.72%), Query Frame = 2
Query:  140 VRGGAMEGKRSIVDRYMAILERRPLYTKMATNYLICFLGDVSCQAMG-------AGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFGAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSIAN 766
            V  G   G   ++  Y+  L+ +P+ TK+ T+ +IC +GD+  QA+        + +L +   A + KR  +YG +GAL++AP+ HYW+ AL++A     A  V GA  PS A R+  ALKM+ +DQ I +P++N+GF+F +   T L  G+G   +       V++ +W T++  WK+WP AN +NF FVP +LR LFL+ VG+ WN+ LS+  N
Sbjct:   81 VESGNKNGGDGLLASYLRALDTKPIITKVVTSGVICGIGDIMAQALAFKTAATESFTLGSFLAALEFKRLAIYGVLGALWIAPVVHYWFDALEAATKDKKA--VAGAPAPSFAMRMFKALKMVTLDQTIGAPLINAGFMFLFTFATALTSGAGGIESGKKAGTMVKNGIWSTMLVCWKLWPIANMINFAFVPAKLRVLFLNFVGLGWNIYLSAAVN 294          
BLAST of jgi.p|Trimin1|82606 vs. uniprot
Match: D6PWV8_9PHAE (PXMP2/4 family protein 2 (Fragment) n=5 Tax=Fucus TaxID=3011 RepID=D6PWV8_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.630e-39
Identity = 74/204 (36.27%), Postives = 123/204 (60.29%), Query Frame = 2
Query:  164 KRSIVDRYMAILERRPLYTKMATNYLICFLGDVSCQAMG-------AGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFGAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLS 754
            K  ++++Y+ +L+RRPL TKM T+ +IC +GDV  QA+          +LR+ + A + KR  +YG++GA+++APL HYW+ AL+         + D     +   ++  ALKM+ +DQ I +P+VN+GF+F +   T +  G+   +A       V+  +  T++  W++WP AN +NF +VP +LR LFL+ VG+ WN+ LS
Sbjct:   15 KPGVLNKYLRVLDRRPLETKMITSGVICAIGDVVAQALSFSNSAVTPNNLRSFANALEFKRLAIYGALGAVWVAPLCHYWFDALEDFF------KGDNNPLDTFKGKMIKALKMVTVDQGIGAPVVNAGFMFLFTLATAMVSGTSPTSAFKKAGRFVRDNIKGTMLVCWRLWPVANLINFAYVPPKLRVLFLNFVGLGWNIFLS 212          
BLAST of jgi.p|Trimin1|82606 vs. uniprot
Match: A0A836CMN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMN9_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.800e-37
Identity = 85/210 (40.48%), Postives = 113/210 (53.81%), Query Frame = 2
Query:  185 YMAILERRPLYTKMATNYLICFLGDVSCQAMGAGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFGAALHSGSAKVQ------------------SALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSI 760
            Y+A L+RRPL TKM T+ ++C LGD  CQ + AG   AL  A D +R VLY +MG LY+AP                     D      T  +   AL M FID  +ASP++N GFL+ + A   LA G+    A  +G  K+Q                  + LWPTL+ASWK+WP ANF NF+ VP  LR L+L+VVG+ W+ VLS++
Sbjct:   83 YLATLKRRPLPTKMVTSAIVCGLGDAICQMLTAGGFGALRHALDFRRLVLYSTMGGLYVAP---------------------DMVPGKVTLVKAKKALNMTFID-TLASPLINGGFLYVFTAANCLASGAAVTGAAGAGLEKLQVLANLMRIANLNNIVDKNTCLWPTLLASWKMWPLANFFNFLLVPPHLRVLYLNVVGLVWHTVLSAL 270          
BLAST of jgi.p|Trimin1|82606 vs. uniprot
Match: A0A6H5K3K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K4_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 5.520e-30
Identity = 60/143 (41.96%), Postives = 94/143 (65.73%), Query Frame = 2
Query:  338 GSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFGAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSIAN 766
            G +GAL++AP+ HYW+  L++A     A  V GA  PS +TR+  ALKM+ +DQ I +P+VN+GF+F +   T L  G+G   +       V++ +W T++  WK+WP AN +NF++VP++LR LF++ VG+ WN+ LS+  N
Sbjct:  270 GVLGALWIAPVVHYWFDTLEAAFKDKKA--VPGAPAPSFSTRMVKALKMVILDQGIGAPLVNAGFMFLFTFATALTSGTGGIESGKKAGIMVKNGIWGTMLVCWKLWPIANMINFLYVPVKLRVLFMNFVGLGWNIYLSAAVN 410          
BLAST of jgi.p|Trimin1|82606 vs. uniprot
Match: A0A835YMP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP8_9STRA)

HSP 1 Score: 114 bits (286), Expect = 8.040e-27
Identity = 81/266 (30.45%), Postives = 130/266 (48.87%), Query Frame = 2
Query:    5 ALLCACTVSAFAPQSSSLCTSSNKLDNVKRARKD----GLTTGALLRMEVRGG-----AMEGKRSIVDRYMAILERRPLYTKMATNYLICFLGDVSCQAMGAGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTAT-RVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGF--GAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSIAN 766
            ALLCA  V AFA   S   T+  +L+ ++   ++     +    L  M V+GG     +    + + ++Y+  L+RRPL TK  T+ +I  +GD   Q + A + + +   FD +R  +Y        +   HYWY  LD  +             P+T   +     + L +DQ +   ++N+GF   +   + +  G  F  GA   + + K+   +WP L+ +WK+WPAANF+NF  VP QLR LF + V + WN+ LS  AN
Sbjct:   12 ALLCASAVRAFASVPS--ITNGKQLNRIQMRNREQEQADVRRRVLATMAVQGGGDAKPSRGAPQQLWNKYLGQLDRRPLITKAWTSTIIGCIGDTIAQVLEART-KGIPFVFDTQRTAIYIFCAVAIGSTAVHYWYNFLDQKVAN-----------PNTVKGKWNRVFRQLAVDQTVGCTVLNAGFYIVHTIVSAVVMGRVFPLGALADTITGKLSREMWPMLINNWKLWPAANFINFSLVPPQLRVLFANFVAIFWNIYLSGSAN 263          
BLAST of jgi.p|Trimin1|82606 vs. uniprot
Match: A0A7S2SVB6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVB6_9STRA)

HSP 1 Score: 107 bits (268), Expect = 3.310e-24
Identity = 71/210 (33.81%), Postives = 106/210 (50.48%), Query Frame = 2
Query:  137 EVRGGAMEGKRSIVDRYMAILERRPLYTKMATNYLICFLGDVSCQAMGAGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFGAA--LHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSI 760
            E+ GG   G  S+ +RY   LE+RP++TKM T  +I  +GD+  Q +    +       D  R   Y     L+L P  HYW+  +D        G++    K   + RV   L   F+DQ +    +N GF F +A       G+ F     L  G  K+ S +W TL+A+W++WP AN++NF FVPL+ R LF + V V W++ LS +
Sbjct:   64 ELSGGKDAGP-SLWERYDRQLEKRPIFTKMWTCLVIGAIGDILAQRITTKFVD-----MDPMRIFQYSVAQFLFLGPSLHYWFNFIDYV------GKLPAIAKLKKSVRV---LVQTFVDQTVGVVTINGGFFFFFAVLQNTLDGTLFPLTRTLGQGWEKITSLMWVTLLANWRLWPLANWVNFQFVPLKYRVLFSNFVAVFWSIYLSVV 258          
BLAST of jgi.p|Trimin1|82606 vs. uniprot
Match: A0A7S3Y660_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y660_HETAK)

HSP 1 Score: 103 bits (256), Expect = 3.000e-22
Identity = 70/199 (35.18%), Postives = 107/199 (53.77%), Query Frame = 2
Query:  182 RYMAILERRPLYTKMATNYLICFLGDVSCQ---AMGAGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGS-GFGAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSIAN 766
            RY  +L      T+M T+ +I  LGD  CQ   A+ AG+  +L    DV+R +++G MGA Y   + H W+  LD+   K    + D  +K         ++ M+ IDQ   +  VN+GF+  +     L  G+  FG +  +    +   + P L+ ++KIWPAANF+NF+ VPLQLR LF +VV + +N +LS I N
Sbjct:  104 RYNELLVTHGAATRMTTSGVISALGDFLCQYLVAVKAGNPFSL----DVRRFLVFGFMGAFYFGTVIHAWFTRLDAFASKRFPNKEDHFKK---------SVAMICIDQTCGAVSVNAGFMLLFPLVNALTLGTFSFGTSFSAAWNDMLKNMIPVLLVNYKIWPAANFMNFLVVPLQLRLLFTNVVSLVYNALLSLIVN 289          
BLAST of jgi.p|Trimin1|82606 vs. uniprot
Match: A0A812KNV9_9DINO (Mpv17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KNV9_9DINO)

HSP 1 Score: 97.8 bits (242), Expect = 1.170e-20
Identity = 71/211 (33.65%), Postives = 99/211 (46.92%), Query Frame = 2
Query:  140 VRGGAMEG--KRSIVDRYMAILERRPLYTKMATNYLICFLGDVSCQAMGAGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFGAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSIAN 766
            VRG A +G  K S+  +Y A+L   P+ TKM T+ +I  LGD  CQ +           F V+R +  G+MG L   P  H WYG L  A+               T T      K + +DQ + +PI+ S  L   A   G AG             ++Q  +   ++ +WK+WPAA  LNF  VP+Q + LF ++V V WN  LS  AN
Sbjct:   34 VRGFAGQGAAKASLWAQYNALLATHPVRTKMVTSGVIAMLGDAGCQLLFE------DEGFSVRRQLELGAMGFLLRGPALHAWYGFLSRAV---------------TGTGALAVAKRILLDQLVFAPIIVSCILSFLAVAQGQAGDI---------PRRMQEQVPGAVLNNWKVWPAAQCLNFALVPVQHQVLFSNLVSVGWNGYLSWSAN 214          
BLAST of jgi.p|Trimin1|82606 vs. uniprot
Match: A0A1V9Z850_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z850_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.210e-20
Identity = 64/198 (32.32%), Postives = 99/198 (50.00%), Query Frame = 2
Query:  170 SIVDRYMAILERRPLYTKMATNYLICFLGDVSCQAMGAGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFGAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSIA 763
            S+  +Y+ +LER+PL TK+ T+  I  LGD++CQ +           FD+KR  ++ ++G +Y+AP  H WYG L+ AI         G  K + A R       L +DQ + +P   + F   +A  T  A        L    AK+ +  W  +  +W +W  A F NF  VP  L+ LF +VVG+ WN  +S ++
Sbjct:   29 SLWQKYLGLLERKPLPTKVVTSAGIAGLGDIACQTVFE------DHPFDIKRFAVFTTLGGVYIAPTLHIWYGFLNRAIA--------GTAKTAVAQR-------LVLDQFVFAPTFMASF---FAVLT--ATNDSDEPVLDRIVAKISNDWWGAVKTNWVVWIPAQFCNFGLVPPPLQVLFSNVVGLFWNAYMSYVS 200          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|82606 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YM13_9STRA3.540e-143100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G6L5_ECTSI2.600e-4337.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D6PWV8_9PHAE1.630e-3936.27PXMP2/4 family protein 2 (Fragment) n=5 Tax=Fucus ... [more]
A0A836CMN9_9STRA1.800e-3740.48Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K3K4_9PHAE5.520e-3041.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YMP8_9STRA8.040e-2730.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SVB6_9STRA3.310e-2433.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3Y660_HETAK3.000e-2235.18Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A812KNV9_9DINO1.170e-2033.65Mpv17 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A1V9Z850_9STRA2.210e-2032.32Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_64contigContig_64:166547..170489 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|82606|CE82605_37
BRITEko00000,ko00001
KEGG Pathwayko04146,map04146
KEGG koko:K13347,ko:K13348
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
DescriptionBelongs to the peroxisomal membrane protein PXMP2 4 family
COG categoryC
Max annot lvl2759|Eukaryota
EggNOG OGsKOG1944@1|root,KOG1944@2759|Eukaryota
Evalue1.31e-44
Seed ortholog2880.D7G6L5
Hectar predicted targeting categoryother localisation
TranscriptId82928
TrackFilteredModels1
ProteinId82606
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|82606gene_10096Tribonema minus UTEX_B_3156 geneContig_64 166547..170489 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|82606Trimin1|82606|CE82605_37Tribonema minus UTEX_B_3156 polypeptideContig_64 166680..170413 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_10096_1exon_10096_1Tribonema minus UTEX_B_3156 exonContig_64 166547..166800 +
exon_10096_2exon_10096_2Tribonema minus UTEX_B_3156 exonContig_64 167198..167370 +
exon_10096_3exon_10096_3Tribonema minus UTEX_B_3156 exonContig_64 168974..169162 +
exon_10096_4exon_10096_4Tribonema minus UTEX_B_3156 exonContig_64 170261..170489 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_10096UTR5_10096Tribonema minus UTEX_B_3156 five_prime_UTRContig_64 166547..166679 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_10096CDS_10096Tribonema minus UTEX_B_3156 CDSContig_64 166680..166800 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_10096UTR3_10096Tribonema minus UTEX_B_3156 three_prime_UTRContig_64 170414..170489 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_10096 ID=mRNA_10096|Name=jgi.p|Trimin1|82606|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=845bp|location=Sequence derived from alignment at Contig_64:166547..170489+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTGTGCGCTGCTCTGTGCGTGCACGGTATCGGCGTTCGCTCCCCAATCAT
CGTCTCTGTGTACGAGCTCTAACAAGCTCGATAATGTCAAGCGCGCAAGG
AAGGATGGGCTTACCACGGGTGCTCTGTTGCGAATGGAGGTCCGTGGTGG
CGCTATGGAGGGCAAGAGGAGCATCGTTGACCGCTACATGGCGATCCTGG
AGCGGCGTCCTCTGTACACCAAGATGGCTACCAATTACTTGATCTGCTTC
CTAGGTGATGTGTCATGTCAAGCGATGGGGGCGGGTTCGCTGCGTGCTCT
GAGCCGTGCCTTTGATGTGAAGCGGGCGGTGCTGTATGGATCCATGGGCG
CACTGTATTTGGCGCCACTGGCTCACTACTGGTATGGCGCGCTGGATTCC
GCGATTGTGAAGACACCCGCTGGCCAGGTGGATGGTGCGGAGAAACCTTC
CACAGCAACGCGCGTTACGGGTGCCCTCAAGATGCTGTTCATCGACCAGG
CCATCGCCTCGCCCATCGTCAACAGCGGCTTCCTGTTTGCCTACGCCGCC
TTTACGGGGCTGGCGGGTGGCAGCGGGTTTGGCGCCGCGCTGCACAGCGG
CTCCGCCAAAGTCCAGAGCGCCCTGTGGCCAACGCTGGTGGCTTCATGGA
AGATATGGCCCGCGGCCAACTTCCTCAACTTCATGTTTGTGCCGCTGCAG
CTGCGCGCGCTCTTCCTGAGCGTTGTGGGCGTGGCATGGAACCTGGTGCT
CTCGTCCATTGCCAACTAGAGCGCATGCGCCAACACTCAGGGCTCACCAA
GTTGTAATCCATGGCTGGCGTTACGATAACCTTGCAGACTGCAAG
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protein sequence of jgi.p|Trimin1|82606

>Trimin1|82606|CE82605_37 ID=Trimin1|82606|CE82605_37|Name=jgi.p|Trimin1|82606|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=212bp
MEVRGGAMEGKRSIVDRYMAILERRPLYTKMATNYLICFLGDVSCQAMGA
GSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVD
GAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSGFG
AALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGV
AWNLVLSSIAN*
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mRNA from alignment at Contig_64:166547..170489+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_10096 ID=mRNA_10096|Name=jgi.p|Trimin1|82606|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3943bp|location=Sequence derived from alignment at Contig_64:166547..170489+ (Tribonema minus UTEX_B_3156 )
GTGTGCGCTGCTCTGTGCGTGCACGGTATCGGCGTTCGCTCCCCAATCAT CGTCTCTGTGTACGAGCTCTAACAAGCTCGATAATGTCAAGCGCGCAAGG AAGGATGGGCTTACCACGGGTGCTCTGTTGCGAATGGAGGTCCGTGGTGG CGCTATGGAGGGCAAGAGGAGCATCGTTGACCGCTACATGGCGATCCTGG AGCGGCGTCCTCTGTACACCAAGATGGCTACCAATTACTTGATCTGCTTC CTAGGTACGGTTTGCTTGCATTCTATGCTTGCCACAGCTGAAACAACTGC TGCAACTACAGGCTATGCCAACAGCAGGCTTCGATGGCTTCAGATATCAT TGCAAATACTGCCGCAATGCAGGTCCTGCACAGCCGATGTATCAGCGCAT TAAGGGCCAGAGACTCGACGTTCTTACAAACAGTAATTTCAGAAGTGGCC GAGTCACGTCGCCGTGAGCGCTGTAAGCGCATGAGCGCATTTGGTTTTTC TAACCATCAAAAAAGAGTCGTTGATGCAGCTTTAGGGGCCGCATCAACAC TCGATACACTTGATATCTGCACCACTTTCAGGCGCACCTGCGTGCACTTG ACCTCCTGTAACGTTGCCCCTGTCTTCACGATGCTGCGTCATACGCCCCA GGTGATGTGTCATGTCAAGCGATGGGGGCGGGTTCGCTGCGTGCTCTGAG CCGTGCCTTTGATGTGAAGCGGGCGGTGCTGTATGGATCCATGGGCGCAC TGTATTTGGCGCCACTGGCTCACTACTGGTATGGCGCGCTGGATTCCGCG ATTGTGAAGACACCCGCTGGCCAGGCAAGTCTAGCTGTAGCTAATGTAGG CGTTGGCATATGGATGTGACAAAGGGCTCAACACACCAACATCACAGCAC TACTCTGCCTGTGGCTGAGGCATGTACGAACACATTGCATAGTTCCTGGC GTCAACTTCAACACTTGACACCATGGAGGACAATGCTAAGAGCGACATTT GTAGGTTGGACTGACGGTGTGGTCCCCACAAAATGATGAGCCTCAGACCT ACAGAAGGCAAAGCTGGCACAGCACGGCAGCAGCTACTGCACTACTGCGT CTCGGCGGCCCTAGGCGTGCTGTAGCTCTAGACACTGCCTCATTGAGCAG ACACAATTGATTTTTTCTCTGCTGTGACGGGCCACGCGGTAATGGGAAAG TCACCTCCACAGGCTGCAATGCCATAGGTACGCATGCATGTCTTGTGGAC TCGCTAAAGGCACTGCCAACGATGATCACATAGGCTCGCTGGGATGCCTG CAAGTCATGAAGAGCCGACGCAGCTGCGCAATACATGCGCTGCTGTGCGC CAGCCACGCTGCAAACTCGTTCTGATTCAGAATGTTGGACTACTGTGTTG ATGTATATTGCTACCCTGTAGCTGTCTGGCGGCAAATGCTCATGTGACAG GTGCACTTGTGCACATCGAACGCCTTGCTCTGATTTGTGTGTCAGGCAAA AGTTCTCAGCGCCTGCAATTGCTGCAAAAAAGCATGCGCACTGTTTGCAT GCGGCTAGACATACCAGGTATTGCTGGCTCGCTGGTGCTGTCGATTGCGT CTGCCACTGAATCACAAATCAAAAAAGGCCAGCCGTTGCTTGCGGTACAA AAGCAATGTTAGGTGCATGTTTGTACATGCAGATACACCATCTGAGCATC CCGCGACTCTTCGCATGCCGCGGCACAAGCTAAACCCTAATCGAGCTCCA GATCGCGTGCGCGTTTTCAACAGCGTGTGTGACCGCCCCGCTCAAGATGT TGTGCGTAGGCCAAGCCACCGCCTGGCTTTCCTTCAACAGATGCGTTCAG CAGCTTGATGCCATATCAATCGATTCAGTTGAATCACTTGAACAGCAAAC GCGCCAGTGAACATGGCGCTATACCCATACGTGCATACTATATGCATACA TACCCCTCATGCAATCACCACAGCAAATTCCAGTGCTGAGACATGCCCAT CAGAGCGCGTCCACTTCGGTGTGCATGCGCTCGGATGGTGCGCAAACCGC CGTCTTGTGCATGTGCGCGACCCTTGTGCATGAAGGGTAACGAAGTAACC CTAGCCCTAACTCGCAACCAATTCTACGTACCCCTCAGGTGGACGGTGCG GAGAAGCCTTCTACGGCGACGCGTGTGTTACGGACGCGCTTACGATGCTG TTCATCAACCAGGGACGGTGCACAAACCGCGGCCCTTGTGCATGCTGAGG AACGAACGTGGCCCTAGTTCTAACACTTTGATCAACCCTACGTTAATCCA CAGGTGGACGGTGCGGCGAAGCCTTCCACACCGACGCAATGCACAAAATG TGACCCCTTGTGCATGCAGGGGGGAACGAACGTAACCCTAGCCCTAACGC TTTGATCAATCCTACACTGATTCTCAGGTGGATGGTGCGGAGAAACCTTC CACAGCAACGCGCGTTACGGGTGCCCTCAAGATGCTGTTCATCGACCAGG CCATCGCCTCGCCCATCGTCAACAGCGGCTTCCTGTTTGCCTACGCCGCC TTTACGGGGCTGGCGGGTGGCAGCGGGTTTGGCGCCGCGCTGCACAGCGG CTCCGCCAAAGTCCAGGTGCGGCCAAGTTGATGTCATTGTTGATATTACT GTGTATCGTGGCGTTTCATGGTGTGCTGATGCGCTTTGCAGAGGTGCACG AGGGCTGCAGCGCGGTCGGCGCCGCGATGTGCGCAGTGGCTCTGCTAGCA GTTCAGGTGCGCGTGGCCAAACTGCAACTTGATGTTTGCATTACGATAAT TGTCACAGAGGGCACGCACACGGAAGGTGTGTCACTTGAATGATCCGTCT GGCGTCCTTAAAGCCCACGACACATGTGCTGGTTGCCCCTTTCGAGCGAG TCTCTTGCACTTGTGGTACAGTGCCGATCAGCAAGCTTGACTGCAGACTG CTGTCTTCATGCAATTGTGCTGAAGTGGAGTTTGAAGGTGAACCAACAGC GGGCACAGAAGGCTGCGGACAAGGAGCATTGGGGGCTGCATCGACAGTGA TGTGGGCGGGAGATCAGACACTTCAAAATGCTGACACAATCACCATGAGC ATCATGATTGTTGGCAGTATGCAGCATTACCTGTGACTATCGCTGGTGGA GTCATGCAAGGCCTGGCCTGCGGAGGATCGCAGCAACACAAATGTTTCTA CGGCTGCAGCCGCGCCGTTCTTCCTGAGCGTTGCCGACGTAGCCATACCC ACCCTATGTCAAGGCCTGAATTTGCCATGTCCCCGAGTCAAGTTACAGAA TCTTCTCCTGCGCTTGTGCAGTTGCTCCTGTGGCCAACAATACCATGGAG GCCGTGAGTTTCGACCAACTTCAGCTCACTTCAATCTTAGTGTGTGCGCT TAATCGGTGGTGAAGTTGGCCTGAACCTAGGGCAGACACCGTCTCTATGC AAAGCGTATCAATAAGCGCCCACGATGCTAATTATGCCGCATGCCTTTCT TCTCTCGTGCTTGTCGCAGAGCTCCCTGTGGCCAGTTTTGGCAAACGTCA CTTCACTTCAATCATCTCTATTCGCGCTCACTGAGCGGTGATGTTGGCCT GAACCGCGGTTAAGAATGATCTGCGGTGAGACTTCTACATGTGCAAAGAA TCTCAATGAGTGCCTAAGAGGCTAATGCCGCCGTATGCCTCTCTTCTGTC GTGCTTTGTCGCAGAGCGCCCTGTGGCCAACGCTGGTGGCTTCATGGAAG ATATGGCCCGCGGCCAACTTCCTCAACTTCATGTTTGTGCCGCTGCAGCT GCGCGCGCTCTTCCTGAGCGTTGTGGGCGTGGCATGGAACCTGGTGCTCT CGTCCATTGCCAACTAGAGCGCATGCGCCAACACTCAGGGCTCACCAAGT TGTAATCCATGGCTGGCGTTACGATAACCTTGCAGACTGCAAG
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Coding sequence (CDS) from alignment at Contig_64:166547..170489+

>mRNA_10096 ID=mRNA_10096|Name=jgi.p|Trimin1|82606|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=636bp|location=Sequence derived from alignment at Contig_64:166547..170489+ (Tribonema minus UTEX_B_3156 )
ATGGAGGTCCGTGGTGGCGCTATGGAGGGCAAGAGGAGCATCGTTGACCG
CTACATGGCGATCCTGGAGCGGCGTCCTCTGTACACCAAGATGGCTACCA
ATTACTTGATCTGCTTCCTAGGTGATGTGTCATGTCAAGCGATGGGGGCG
GGTTCGCTGCGTGCTCTGAGCCGTGCCTTTGATGTGAAGCGGGCGGTGCT
GTATGGATCCATGGGCGCACTGTATTTGGCGCCACTGGCTCACTACTGGT
ATGGCGCGCTGGATTCCGCGATTGTGAAGACACCCGCTGGCCAGGTGGAT
GGTGCGGAGAAACCTTCCACAGCAACGCGCGTTACGGGTGCCCTCAAGAT
GCTGTTCATCGACCAGGCCATCGCCTCGCCCATCGTCAACAGCGGCTTCC
TGTTTGCCTACGCCGCCTTTACGGGGCTGGCGGGTGGCAGCGGGTTTGGC
GCCGCGCTGCACAGCGGCTCCGCCAAAGTCCAGAGCGCCCTGTGGCCAAC
GCTGGTGGCTTCATGGAAGATATGGCCCGCGGCCAACTTCCTCAACTTCA
TGTTTGTGCCGCTGCAGCTGCGCGCGCTCTTCCTGAGCGTTGTGGGCGTG
GCATGGAACCTGGTGCTCTCGTCCATTGCCAACTAG
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