prot_S-firma_M_contig934.20303.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig934.20303.1
Unique Nameprot_S-firma_M_contig934.20303.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length130
Homology
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BLAST of mRNA_S-firma_M_contig934.20303.1 vs. uniprot
Match: A0A6H5JM54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM54_9PHAE)

HSP 1 Score: 214 bits (545), Expect = 9.420e-70
Identity = 104/129 (80.62%), Postives = 118/129 (91.47%), Query Frame = 0 
Query:    1 MTWAGLSVTLWAVVGGVFVLFLLVIDRWIHCTRNATRFCRCKKPPPDPLEGLPEQPDVENDVGFHREHDRDFERNWHVVALQRDETQERADEIIRLREEAVRRRELEAAAKEKIKIVRGVATVRGIQTE 129
            M++AGLSVTLWAVVGGVF+L LL +DRWIHCTRN   +C CKKPPPDPL+G+PEQPDVEN  G+HREHDRDFERNWH+VALQRDETQE A+EI+RLR EA RRRELEAA++EK+KIVRGVATVRGIQTE
Sbjct:    1 MSYAGLSVTLWAVVGGVFILLLLAMDRWIHCTRNWADWCSCKKPPPDPLDGVPEQPDVENQEGYHREHDRDFERNWHLVALQRDETQEEAEEILRLRAEAARRRELEAASREKVKIVRGVATVRGIQTE 129
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BLAST of mRNA_S-firma_M_contig934.20303.1 vs. uniprot
Match: D7FWH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWH8_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.080e-40
Identity = 70/83 (84.34%), Postives = 78/83 (93.98%), Query Frame = 0 
Query:   47 DPLEGLPEQPDVENDVGFHREHDRDFERNWHVVALQRDETQERADEIIRLREEAVRRRELEAAAKEKIKIVRGVATVRGIQTE 129
            DPL+G+PEQPDVEN  G+HREHDRDFERNWHVVALQRDETQE A+EI+RLR EA RRRELEAA++EK+KIVRGVATVRGIQTE
Sbjct:   22 DPLDGVPEQPDVENQEGYHREHDRDFERNWHVVALQRDETQEEAEEILRLRAEAARRRELEAASREKVKIVRGVATVRGIQTE 104
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig934.20303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JM54_9PHAE9.420e-7080.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWH8_ECTSI1.080e-4084.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..129
NoneNo IPR availableTMHMMTMhelixcoord: 4..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig934contigS-firma_M_contig934:6460..10228 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig934.20303.1mRNA_S-firma_M_contig934.20303.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig934 4700..10357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig934.20303.1 ID=prot_S-firma_M_contig934.20303.1|Name=mRNA_S-firma_M_contig934.20303.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=130bp
MTWAGLSVTLWAVVGGVFVLFLLVIDRWIHCTRNATRFCRCKKPPPDPLE
GLPEQPDVENDVGFHREHDRDFERNWHVVALQRDETQERADEIIRLREEA
VRRRELEAAAKEKIKIVRGVATVRGIQTE*
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