prot_S-firma_M_contig924.20183.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig924.20183.1
Unique Nameprot_S-firma_M_contig924.20183.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length169
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig924.20183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..161
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..114
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 162..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..136
NoneNo IPR availableTMHMMTMhelixcoord: 121..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig924contigS-firma_M_contig924:8924..9430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig924.20183.1mRNA_S-firma_M_contig924.20183.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig924 8924..9501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig924.20183.1 ID=prot_S-firma_M_contig924.20183.1|Name=mRNA_S-firma_M_contig924.20183.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=169bp
SRIHRRRGFVKRVVNSLSACSSTATRPRSRYRSRYDQGLPKRRRRVARGA
RGRAPSAGVKAARSRRAPIVAAYPWCRPCRCLRYGGGRSLHLGERIAGGS
CCWWWWWSDGRREGVYHLLPLLLLLLLLGALLRLLLGAALTLLLGLPPHA
PLLLLRLLLLLRPLATGR*
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