prot_S-firma_M_contig919.20138.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig919.20138.1
Unique Nameprot_S-firma_M_contig919.20138.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length194
Homology
BLAST of mRNA_S-firma_M_contig919.20138.1 vs. uniprot
Match: D8LI42_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI42_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 6.100e-68
Identity = 140/191 (73.30%), Postives = 148/191 (77.49%), Query Frame = 0
Query:    1 MRVVEFESAMHDNVGADAD---AXXXEASPPASSPADGEAAPTASPPLPD-NDRPRTERATDRIGQLLVTLCRDKLAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVVEALMGGCLNSSMVWLLHYNKAMLDVVGELRHLCGLDGTAPKSPIVARKGGRGGYTPRSVSPV-KGPRKRSPKQGKGAG 186
            MRVVEFESAM D  G       A    A       A G+ A   SP LP+ +DRP+T+RAT+RIG+LLVTLC DK AGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVVEALMGGCLNSSMVWLLHYNKAMLDVVGELRHL GLDGTAPKSP   RK  RGGYTPRSVSP+ KG  KRSP   KG G
Sbjct:  299 MRVVEFESAMRDGTGGGGGTTAAGSFGAGDGGDDEASGDEA-RPSPSLPEGDDRPQTKRATERIGKLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVVEALMGGCLNSSMVWLLHYNKAMLDVVGELRHLSGLDGTAPKSPTPGRKVVRGGYTPRSVSPMSKG--KRSPGPAKGGG 486          
BLAST of mRNA_S-firma_M_contig919.20138.1 vs. uniprot
Match: A0A6H5KQH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQH9_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 8.730e-66
Identity = 139/199 (69.85%), Postives = 146/199 (73.37%), Query Frame = 0
Query:    1 MRVVEFESAMHDNVGAD-----------ADAXXXEASPPASSPADGEAAPTASPPLP-DNDRPRTERATDRIGQLLVTLCRDKLAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVVEALMGGCLNSSMVWLLHYNKAMLDVVGELRHLCGLDGTAPKSPIVARKGGRGGYTPRSVSPV-KGPRKRSPKQGKGAG 186
            MRVVEFESAM D  G              D    E       P+  EA P  SP LP D+DRP+T+RAT+RIG+LLVTLC DK AGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETAR VVEALMGGCLNSSMVWLLHYNKAM DVVGELRHL GLDGTAPK P   RK  RGGYTPRSVSP+ KG  KRSP   KG G
Sbjct:  352 MRVVEFESAMRDGTGGXXXXXXXGSFGAGDGGDDE-------PSGDEARP--SPSLPEDDDRPQTKRATERIGKLLVTLCSDKSAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARTVVEALMGGCLNSSMVWLLHYNKAMQDVVGELRHLGGLDGTAPKLPTPGRKVVRGGYTPRSVSPMSKG--KRSPGPAKGGG 539          
BLAST of mRNA_S-firma_M_contig919.20138.1 vs. uniprot
Match: A0A1E7FHH9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHH9_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.420e-16
Identity = 41/94 (43.62%), Postives = 63/94 (67.02%), Query Frame = 0
Query:   50 RPRTERATDRIGQLLVTLCRDKLAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVVEALMGGCLNSSMVWLLHYNKAMLDVVGELRHLCG 143
            +P + RAT ++ QLL TLC D+   VGEQ++PHL GLL+L+ ++YP +G HV + A  V+ A    CL++S+VW LH  K +  +  +++ LCG
Sbjct:  137 KPISSRATGKVSQLLCTLCTDQ--SVGEQLRPHLFGLLALSGASYPRSGVHVAKAASQVIIAFAQYCLSNSLVWFLHDRKMITHMTDDIKELCG 228          
BLAST of mRNA_S-firma_M_contig919.20138.1 vs. uniprot
Match: A0A7S1CTZ4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CTZ4_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 5.080e-16
Identity = 39/102 (38.24%), Postives = 64/102 (62.75%), Query Frame = 0
Query:   51 PRTERATDRIGQLLVTLCRDKLAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVVEALMGGCLNSSMVWLLHYNKAMLDVVGELRHLCGLDGTAPKSP 152
            P + +A  ++ +LL  LC D    VGEQ++PHL GLL+L+ ++YP +G H+   A  V+ A    CL++S+VW LH  K ++ +  +++ LC + G+ P SP
Sbjct:   10 PLSTQAAAKVSKLLCLLCSDP--SVGEQLRPHLFGLLALSGASYPNSGVHIAAAASDVILAFSRSCLSASLVWFLHDRKMIVHMTDDIKELCAMTGSGPSSP 109          
BLAST of mRNA_S-firma_M_contig919.20138.1 vs. uniprot
Match: A0A7S1YSP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YSP2_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 6.860e-16
Identity = 41/102 (40.20%), Postives = 66/102 (64.71%), Query Frame = 0
Query:   56 ATDRIGQLLVTLCRDKLAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVVEALMGGCLNSSMVWLLHYNKAMLDVVGELRHLCGLDGTAPKSPIVARK 157
            AT ++ +LL  LC D    VGEQ++PHL GLL+L+ ++YPP+G H+   A +V+ +    CL++S+VW LH  K ++ +  +++ LCG+  TA  SP  A +
Sbjct:    4 ATAKVTRLLCLLCSDP--SVGEQLRPHLFGLLALSGASYPPSGIHIASAASSVILSFSENCLSASLVWFLHDRKMIVHMTDDIKELCGM--TAVSSPSSATR 101          
BLAST of mRNA_S-firma_M_contig919.20138.1 vs. uniprot
Match: A0A7S4S7R3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S7R3_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 7.070e-16
Identity = 46/118 (38.98%), Postives = 73/118 (61.86%), Query Frame = 0
Query:   40 TASPPLPDNDRPRTERATDRIGQLLVTLCRDKLAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVVEALMGGCLNSSMVWLLHYNKAMLDVVGELRHLCGLDGTAPKSPIVARK 157
            + S P PD   P +  AT ++ +LL  LC D    VGEQ++PHL GLL+L+ ++YPP+G H+   A +V+ +    CL++S+VW LH  K ++ +  +++ LCG+  TA  SP  A +
Sbjct:   77 SVSTPQPDPG-PVSTLATAKVARLLCLLCSDP--SVGEQLRPHLFGLLALSGASYPPSGIHIASAASSVILSFSENCLSASLVWFLHDRKMIVHMTDDIKELCGM--TAVSSPSSATR 189          
BLAST of mRNA_S-firma_M_contig919.20138.1 vs. uniprot
Match: A0A7S3Q415_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q415_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.310e-15
Identity = 42/106 (39.62%), Postives = 65/106 (61.32%), Query Frame = 0
Query:   46 PDNDRPRTERATDRIGQLLVTLCRDKLAGVGEQIKPHLPGLLSLAVSAYPPNGAHVQETARAVVEALMGGCLNSSMVWLLHYNKAMLDVVGELRHLCGLDGTAPKS 151
            P   R  ++ AT+++ +LL  LC D  A VGEQ++PHL GLL+L+ + YP NG HV   A  V+ +   GCL++S+VW LH    ++ +  +++ LCG+   A  S
Sbjct:  279 PQKVRSVSKAATEKVQKLLSLLCGD--ASVGEQLRPHLFGLLALSGARYPINGVHVARAASKVIVSFSKGCLSTSLVWFLHDRNMIVHMTDDVKELCGMTAAAASS 382          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig919.20138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LI42_ECTSI6.100e-6873.30Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KQH9_9PHAE8.730e-6669.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1E7FHH9_9STRA2.420e-1643.62Uncharacterized protein (Fragment) n=1 Tax=Fragila... [more]
A0A7S1CTZ4_9STRA5.080e-1638.24Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S1YSP2_9STRA6.860e-1640.20Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S4S7R3_9STRA7.070e-1638.98Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3Q415_9STRA1.310e-1539.62Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig919contigS-firma_M_contig919:23888..25395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig919.20138.1mRNA_S-firma_M_contig919.20138.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig919 23857..25395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig919.20138.1 ID=prot_S-firma_M_contig919.20138.1|Name=mRNA_S-firma_M_contig919.20138.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=194bp
MRVVEFESAMHDNVGADADADAEEASPPASSPADGEAAPTASPPLPDNDR
PRTERATDRIGQLLVTLCRDKLAGVGEQIKPHLPGLLSLAVSAYPPNGAH
VQETARAVVEALMGGCLNSSMVWLLHYNKAMLDVVGELRHLCGLDGTAPK
SPIVARKGGRGGYTPRSVSPVKGPRKRSPKQGKGAGGGPAAGVD
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