prot_S-firma_F_contig11127.1494.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig11127.1494.1
Unique Nameprot_S-firma_F_contig11127.1494.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length235
Homology
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BLAST of mRNA_S-firma_F_contig11127.1494.1 vs. uniprot
Match: D7G6J3_ECTSI (Similar to ring finger protein 167 isoform 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6J3_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 4.220e-15
Identity = 40/61 (65.57%), Postives = 45/61 (73.77%), Query Frame = 0 
Query:    1 CVDVWLAQNPSCPFCKSAVEPPSDEAKGTGSGXXXXLLGSSAASVRNFRRWLRNHERGSGA 61
            CVDVWLAQ+P+CPFCK  VEPPS E+K         L+GSSA  VR+ RRWLRNHERG GA
Sbjct:  180 CVDVWLAQSPTCPFCKQPVEPPSTESKA-------GLVGSSAVPVRSLRRWLRNHERGPGA 233
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BLAST of mRNA_S-firma_F_contig11127.1494.1 vs. uniprot
Match: A0A6H5JXB7_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXB7_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 3.570e-14
Identity = 40/61 (65.57%), Postives = 44/61 (72.13%), Query Frame = 0 
Query:    1 CVDVWLAQNPSCPFCKSAVEPPSDEAKGTGSGXXXXLLGSSAASVRNFRRWLRNHERGSGA 61
            CVDVWLAQ+P+CPFCK  VEPPS E+K          LGSSAA  R+ RRWLRNHERG GA
Sbjct:  382 CVDVWLAQSPTCPFCKQPVEPPSTESK-------VGPLGSSAAPFRSVRRWLRNHERGPGA 435
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig11127.1494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6J3_ECTSI4.220e-1565.57Similar to ring finger protein 167 isoform 1 n=1 T... [more]
A0A6H5JXB7_9PHAE3.570e-1465.57RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig11127contigS-firma_F_contig11127:3396..4100 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig11127.1494.1mRNA_S-firma_F_contig11127.1494.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig11127 3396..4100 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig11127.1494.1 ID=prot_S-firma_F_contig11127.1494.1|Name=mRNA_S-firma_F_contig11127.1494.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=235bp
CVDVWLAQNPSCPFCKSAVEPPSDEAKGTGSGGGGGLLGSSAASVRNFRR
WLRNHERGSGAAVAEAAQQAVPPAPVAGAAGGSTERTSGGGGGGVAVERT
SGGAVGGFAPTGGGGGESEFSATAATLAATAVSSALTATEALGGSAAGGG
DGAAAGSGPGAAAAAAAAAAPDDVHDAAAVVVEEEQSQAEAPATESTASF
SGVELSAVSAETAADTAPPAAPLPGVVVGARVEAE
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