mRNA_S-firma_F_contig10072.143.1 (mRNA) Sphaerotrichia firma ET2_F female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-firma_F_contig10072.143.1
Unique NamemRNA_S-firma_F_contig10072.143.1
TypemRNA
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Homology
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: D7G0W4_ECTSI (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W4_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 4.020e-98
Identity = 168/194 (86.60%), Postives = 178/194 (91.75%), Query Frame = 1
Query:    1 MIDNVVERGDKHEFHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRVRQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESKEYAGKLQDNDASNPAF 582
            MIDNVVE G   EF RST+YLVLAAV+CA FSGIRGCIF++VGARVNVRVR+RLFESLVRQEIGFFDTTKTGDLTSRL+SDCTKVGDQVT+NVNVFLRN VMVVVTLLFMFYLSWRLSLVAFISVPAIV VSK YG YIRKLSKLSQDKLAEAGSVAEESLGSM+TVRSFAAEGRESKEYA KLQD   ++P  
Sbjct:  113 MIDNVVEGGGDSEFRRSTVYLVLAAVSCAIFSGIRGCIFSVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKVGDQVTLNVNVFLRNLVMVVVTLLFMFYLSWRLSLVAFISVPAIVIVSKWYGEYIRKLSKLSQDKLAEAGSVAEESLGSMSTVRSFAAEGRESKEYAKKLQDRTPTSPTL 306          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A4D9CQ84_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ84_9STRA)

HSP 1 Score: 246 bits (629), Expect = 1.530e-74
Identity = 133/235 (56.60%), Postives = 167/235 (71.06%), Query Frame = 3
Query:  615 YYALSKKGGYAYGFYASSFVLLPNLVTAVVLFYGGQLVMQGE-ITGGKVVSFMIYLTSLSDGFNDMASIFSSMTQAVGAADKVFELISREPKGATPTGTPPPAEMGMRSGPDAIAAAEAAAAGEKPDFCLGAVELRNVDFEYPSRPGRRILDGVSFNAAAGQVLALVGPSGGGKSSCIALLENLYHPSRGQVMLDGLAVHKYDHHWLHRNISIVGQEPTLYARSIRENIIYGLEG 1316
            YY L+K+   AYG YA +  LLPNLVTA+VLFYGGQLV+  + +T G++VSF++ L SLS+GF++M SIFSS+TQA+GAADKVFELI R P+ +TP   PP A                      P FC G VELR+V F YP+RP R +L+ ++  A  G+V+ALVGPSGGGKSSC+ALLEN Y P  G V+LDG  V +YD HW HR++SIV QEP LYARSIR+NI++GLEG
Sbjct:   24 YYDLNKQEARAYGAYAVATTLLPNLVTALVLFYGGQLVLNEDGLTSGQLVSFLLLLGSLSEGFSNMGSIFSSITQALGAADKVFELIRRPPQ-STPLPIPPLA----------------------PAFCSGKVELRDVTFRYPARPARPVLNKINMLAEPGKVVALVGPSGGGKSSCVALLENFYEPESGMVLLDGRKVQEYDPHWYHRHVSIVSQEPMLYARSIRQNILFGLEG 235          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A835YSY9_9STRA (ABC transporter type 1, transmembrane domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSY9_9STRA)

HSP 1 Score: 249 bits (635), Expect = 3.060e-72
Identity = 128/234 (54.70%), Postives = 161/234 (68.80%), Query Frame = 3
Query:  615 YYALSKKGGYAYGFYASSFVLLPNLVTAVVLFYGGQLVMQGEITGGKVVSFMIYLTSLSDGFNDMASIFSSMTQAVGAADKVFELISREPKGATPTGTPPPAEMGMRSGPDAIAAAEAAAAGEKPDFCLGAVELRNVDFEYPSRPGRRILDGVSFNAAAGQVLALVGPSGGGKSSCIALLENLYHPSRGQVMLDGLAVHKYDHHWLHRNISIVGQEPTLYARSIRENIIYGLEG 1316
            YYAL+ +   AYG YAS+  LLP LVT +VLFYGG++V+ G++ GG VV+FM+YL+SLSDGFN+M +IFSS+TQAVGAADKVFELI REP+   P G                       A  +P  C G + L  V F YP+RP R +L GV+     GQVLALVGPSGGGKSSC++L+EN YHP +G+++LDG  V   DH W HR +S+VGQEP LY R+I +NI+YGLEG
Sbjct:  293 YYALAIREAAAYGAYASTAALLPQLVTVLVLFYGGRMVLAGQLDGGSVVAFMLYLSSLSDGFNNMGAIFSSITQAVGAADKVFELIRREPQVRKPRG----------------------GAALRPLECAGELTLEEVHFTYPARPTRPVLHGVNLVVRPGQVLALVGPSGGGKSSCVSLIENFYHPDQGRLLLDGTPVQDLDHRWYHRVVSLVGQEPVLYGRTIEQNILYGLEG 504          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: W7TKE5_9STRA (Atp-binding cassette sub-family b member 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKE5_9STRA)

HSP 1 Score: 249 bits (635), Expect = 2.320e-70
Identity = 135/235 (57.45%), Postives = 167/235 (71.06%), Query Frame = 3
Query:  615 YYALSKKGGYAYGFYASSFVLLPNLVTAVVLFYGGQLVM-QGEITGGKVVSFMIYLTSLSDGFNDMASIFSSMTQAVGAADKVFELISREPKGATPTGTPPPAEMGMRSGPDAIAAAEAAAAGEKPDFCLGAVELRNVDFEYPSRPGRRILDGVSFNAAAGQVLALVGPSGGGKSSCIALLENLYHPSRGQVMLDGLAVHKYDHHWLHRNISIVGQEPTLYARSIRENIIYGLEG 1316
            YY L+K+   AYG YA +  LLPNLVTA+VLFYGGQLV+ Q  +T G++VSF++ L SLS+GF++M SIFSS+TQA+GAADKVFELI R P+ +TP   PP A                      P FC G VELR+V F YP+RP R +L+ ++  A  G+V+ALVGPSGGGKSSC+ALLEN Y P  G V+LDG  V +YD HW HRN+SIV QEP LYARSIR+NI++GLEG
Sbjct:  569 YYDLNKQEARAYGAYAVATTLLPNLVTALVLFYGGQLVLNQDGLTSGQLVSFLLLLGSLSEGFSNMGSIFSSITQALGAADKVFELIRRPPQ-STPLPEPPLA----------------------PAFCSGKVELRDVTFRYPARPARPVLNKMNMLAEPGKVVALVGPSGGGKSSCVALLENFYEPESGMVLLDGRKVQEYDPHWYHRNVSIVSQEPVLYARSIRQNILFGLEG 780          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A7S4QZM3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QZM3_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.020e-59
Identity = 122/252 (48.41%), Postives = 166/252 (65.87%), Query Frame = 3
Query:  609 GSYYALSKKGGYAYGFYASSFVLLPNLVTAVVLFYGGQLVMQGEITGGKVVSFMIYLTSLSDGFNDMASIFSSMTQAVGAADKVFELISREPKGATPTGTPPPA---EMG----------MRSGPDAIA---AAEAAAAGEKPDFCLGAVELRNVDFEYPSRPGRRILDGVSFNAAAGQVLALVGPSGGGKSSCIALLENLYHPSRGQVMLDGLAVHKYDHHWLHRNISIVGQEPTLYARSIRENIIYGLEG 1316
            G Y +++ +  YAY  Y S    LP LVTAVVLFYGG LV   ++T G++VSF++YL SLSD FN + +IFSS+TQA+GAADKVFELI R+P+  +P+ +   +   E G           + GP  I    + E    G +P  C G V L  V+  YP+RP R++L G++  A AG V+ALVGPSGGGKSS ++L+++LY PS G+V +DG  VH     WL R++++V QEPTL+ARS+R NI+YGLEG
Sbjct:  438 GQYLSINLRSAYAYLGYCSCITSLPQLVTAVVLFYGGLLVEDRQMTSGELVSFILYLNSLSDAFNTIGNIFSSLTQAMGAADKVFELIHRKPQLTSPSSSSNLSIHEENGGNNTRCCGRKTKCGPTYIMPKRSEEHRKRGLQPSTCNGVVTLHGVNLCYPARPLRQVLHGMNLTAPAGAVVALVGPSGGGKSSVVSLIQHLYEPSNGEVCIDGNKVHDLSPEWLSRHVTVVSQEPTLFARSVRRNIMYGLEG 689          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A1E7FK35_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FK35_9STRA)

HSP 1 Score: 212 bits (539), Expect = 2.690e-59
Identity = 115/234 (49.15%), Postives = 155/234 (66.24%), Query Frame = 3
Query:  615 YYALSKKGGYAYGFYASSFVLLPNLVTAVVLFYGGQLVMQGEITGGKVVSFMIYLTSLSDGFNDMASIFSSMTQAVGAADKVFELISREPKGATPTGTPPPAEMGMRSGPDAIAAAEAAAAGEKPDFCLGAVELRNVDFEYPSRPGRRILDGVSFNAAAGQVLALVGPSGGGKSSCIALLENLYHPSRGQVMLDGLAVHKYDHHWLHRNISIVGQEPTLYARSIRENIIYGLEG 1316
            Y AL+ K   AY  YA+    LP LVTA+V+FYGG LV  G+I+ G++VSF++YL SLSDGF+ +  IFSS+TQAVGAADKVFEL+ R+  G       P  + G+                 +P+ C G V L+NV+  YP+RP RR+L+ +S +   G ++AL G SGGGKSS I+L++++Y  S G+V+LD + VH+Y   WL + ISIV QEP L+ARSIR NI+YGLEG
Sbjct:  173 YLALNTKSAIAYSGYATVSTSLPQLVTALVVFYGGLLVRNGDISSGELVSFLLYLQSLSDGFSSIGYIFSSLTQAVGAADKVFELMYRKRPGM------PQQQHGL-----------------EPNTCRGEVTLKNVEMYYPARPNRRVLNDMSLSVPPGSIIALCGASGGGKSSIISLVQHMYEQSSGKVLLDDVEVHEYSPRWLSQQISIVQQEPILFARSIRRNIMYGLEG 383          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A6U3T7I6_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3T7I6_9STRA)

HSP 1 Score: 218 bits (554), Expect = 6.840e-59
Identity = 122/252 (48.41%), Postives = 166/252 (65.87%), Query Frame = 3
Query:  609 GSYYALSKKGGYAYGFYASSFVLLPNLVTAVVLFYGGQLVMQGEITGGKVVSFMIYLTSLSDGFNDMASIFSSMTQAVGAADKVFELISREPKGATPTGTPPPA---EMG----------MRSGPDAIA---AAEAAAAGEKPDFCLGAVELRNVDFEYPSRPGRRILDGVSFNAAAGQVLALVGPSGGGKSSCIALLENLYHPSRGQVMLDGLAVHKYDHHWLHRNISIVGQEPTLYARSIRENIIYGLEG 1316
            G Y +++ +  YAY  Y S    LP LVTAVVLFYGG LV   ++T G++VSF++YL SLSD FN + +IFSS+TQA+GAADKVFELI R+P+  +P+ +   +   E G           + GP  I    + E    G +P  C G V L  V+  YP+RP R++L G++  A AG V+ALVGPSGGGKSS ++L+++LY PS G+V +DG  VH     WL R++++V QEPTL+ARS+R NI+YGLEG
Sbjct:  581 GQYLSINLRSAYAYLGYCSCITSLPQLVTAVVLFYGGLLVEDRQMTSGELVSFILYLNSLSDAFNTIGNIFSSLTQAMGAADKVFELIHRKPQLTSPSSSSNLSIHEENGGNNTRCCGRETKCGPTYIMPKRSEEHRKRGLQPSTCNGVVTLHGVNLCYPARPLRQVLHGMNLTAPAGAVVALVGPSGGGKSSVVSLIQHLYEPSNGEVCIDGNKVHDLSPEWLSRHVTVVSQEPTLFARSVRRNIMYGLEG 832          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A448ZA23_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZA23_9STRA)

HSP 1 Score: 214 bits (544), Expect = 8.840e-58
Identity = 117/234 (50.00%), Postives = 157/234 (67.09%), Query Frame = 3
Query:  615 YYALSKKGGYAYGFYASSFVLLPNLVTAVVLFYGGQLVMQGEITGGKVVSFMIYLTSLSDGFNDMASIFSSMTQAVGAADKVFELISREPKGATPTGTPPPAEMGMRSGPDAIAAAEAAAAGEKPDFCLGAVELRNVDFEYPSRPGRRILDGVSFNAAAGQVLALVGPSGGGKSSCIALLENLYHPSRGQVMLDGLAVHKYDHHWLHRNISIVGQEPTLYARSIRENIIYGLEG 1316
            Y  ++ K   AY  YA+    LP LVTA+V+FYGG LV  G ++ G++VSF++YL SLSD F+ +  IFSS+TQAVGAADKVFEL+ R+ +   P         G+ +    +   +    G +P+ C G V L++V+  YP+RP RR+L G+S     G ++ALVGPSGGGKSS I+L++NLY  S G+VMLD + VH+Y   WL  +ISIV QEPTL+ARSIR NI+YGLEG
Sbjct:  520 YLEMTFKSAVAYCGYATVSTSLPQLVTALVVFYGGLLVRNGSLSSGELVSFLLYLQSLSDAFSSIGYIFSSLTQAVGAADKVFELMHRDRR-VIPQTMDSNNNNGVTNQSSLVQ--KVRVTGVEPNECKGEVTLQDVEMHYPARPNRRVLRGMSLTVPPGSIVALVGPSGGGKSSIISLVQNLYSQSSGKVMLDNIDVHEYSPRWLSHHISIVQQEPTLFARSIRRNIMYGLEG 750          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A7S2KWJ3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KWJ3_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.030e-55
Identity = 116/242 (47.93%), Postives = 157/242 (64.88%), Query Frame = 3
Query:  615 YYALSKKGGYAYGFYASSFVLLPNLVTAVVLFYGGQLVMQ----GEITGGKVVSFMIYLTSLSDGFNDMASIFSSMTQAVGAADKVFELISREPKGATP-TGTPPPAEMGMRSGPDA---IAAAEAAAAGEKPDFCLGAVELRNVDFEYPSRPGRRILDGVSFNAAAGQVLALVGPSGGGKSSCIALLENLYHPSRGQVMLDGLAVHKYDHHWLHRNISIVGQEPTLYARSIRENIIYGLEG 1316
            Y  L+ +   AY  Y +S   LP LV A+VLFYGG LV+       I+ G++VSF +YL+SLSD FN M +IFSS+T A+GAADKVFE++ R+P    P +G+    + G  S P++       +    G  P  C G V L  +D  YP+RP R++LDG++  A  G V ALVGPSGGGKSS ++L+++LY  +RG V +DG  V   +H WL R++S+V QEPTLYARSI+ NI+YGLEG
Sbjct:  341 YLKLNARAAVAYVGYMTSITTLPLLVNAMVLFYGGLLVLSQNSDDHISSGQLVSFFLYLSSLSDAFNSMGNIFSSLTTAIGAADKVFEMMYRKPLYKKPASGSSSGDDGGELSLPNSGNPTTTCKMLHQGINPSDCAGEVRLNGIDMFYPARPTRKVLDGMTLTAPRGTVCALVGPSGGGKSSIVSLIQHLYEQNRGTVTIDGHDVRDLNHLWLSRHVSVVSQEPTLYARSIKRNIMYGLEG 582          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A1Z5KDK8_FISSO (ATP-binding cassette, subfamily B (MDR/TAP), member 9 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDK8_FISSO)

HSP 1 Score: 206 bits (524), Expect = 5.130e-55
Identity = 111/239 (46.44%), Postives = 152/239 (63.60%), Query Frame = 3
Query:  615 YYALSKKGGYAYGFYASSFVLLPNLVTAVVLFYGGQLVMQGEITGGKVVSFMIYLTSLSDGFNDMASIFSSMTQAVGAADKVFELISREPKGATPTGTPPPAEMGMRSGPDAIAAAEAAAAGEK-----PDFCLGAVELRNVDFEYPSRPGRRILDGVSFNAAAGQVLALVGPSGGGKSSCIALLENLYHPSRGQVMLDGLAVHKYDHHWLHRNISIVGQEPTLYARSIRENIIYGLEG 1316
            Y  L+ +  +AY  +A     LP LV AVV+FYGG +V   +IT G++VSF++YL SLSD    M  +F S+TQAVGAADKVFEL++R+PK   P+ T P  E    S    +         ++     P+   G +E ++V   YPSRP +R+L+G+SF    G ++ALVG SGGGKSS I+LL + Y    GQ++ DG+A+H+    WL RN+SIV QEPTL+ RSI+ NI+YGLEG
Sbjct:  506 YLTLNMRSSFAYCGFACLTTSLPELVFAVVVFYGGLMVRNEDITSGQLVSFLLYLQSLSDAIASMGWVFGSLTQAVGAADKVFELLNRQPKVTPPSTTRPIMEAERHSRAHNLQLGTFKTTNQRLQGIVPESARGQIEFKDVTLYYPSRPQKRVLNGISFKVEPGSIVALVGESGGGKSSIISLLLHHYEQQSGQILFDGIAIHELQAAWLCRNVSIVSQEPTLFGRSIKRNIMYGLEG 744          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0W4_ECTSI4.020e-9886.60ABC transmembrane type-1 domain-containing protein... [more]
A0A4D9CQ84_9STRA1.530e-7456.60Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A835YSY9_9STRA3.060e-7254.70ABC transporter type 1, transmembrane domain-conta... [more]
W7TKE5_9STRA2.320e-7057.45Atp-binding cassette sub-family b member 9 n=1 Tax... [more]
A0A7S4QZM3_9STRA1.020e-5948.41Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1E7FK35_9STRA2.690e-5949.15p-loop containing nucleoside triphosphate hydrolas... [more]
A0A6U3T7I6_9STRA6.840e-5948.41Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A448ZA23_9STRA8.840e-5850.00Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2KWJ3_9STRA1.030e-5547.93Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A1Z5KDK8_FISSO5.130e-5546.44ATP-binding cassette, subfamily B (MDR/TAP), membe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10072contigS-firma_F_contig10072:449..5162 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-19
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Properties
Property NameValue
Seed ortholog2880.D7G0W4
Preferred nameABCB9
PFAMsABC_membrane,ABC_tran
Max annot lvl2759|Eukaryota
KEGG koko:K02021,ko:K05653,ko:K05654,ko:K05656,ko:K05658
KEGG TC3.A.1.106,3.A.1.110,3.A.1.112,3.A.1.113,3.A.1.117,3.A.1.201,3.A.1.209,3.A.1.21
KEGG Pathwayko02010,ko04142,ko04145,ko04612,ko04976,ko05168,ko05206,ko05226,ko05340,map02010,map04142,map04145,map04612,map04976,map05168,map05206,map05226,map05340
GOsGO:0000166,GO:0000323,GO:0001910,GO:0001911,GO:0001912,GO:0001914,GO:0001916,GO:0002237,GO:0002376,GO:0002428,GO:0002474,GO:0002475,GO:0002476,GO:0002477,GO:0002478,GO:0002479,GO:0002481,GO:0002483,GO:0002484,GO:0002485,GO:0002488,GO:0002489,GO:0002577,GO:0002579,GO:0002583,GO:0002585,GO:0002589,GO:0002591,GO:0002682,GO:0002683,GO:0002684,GO:0002697,GO:0002698,GO:0002699,GO:0002703,GO:0002704,GO:0002705,GO:0002706,GO:0002707,GO:0002708,GO:0002709,GO:0002711,GO:0002715,GO:0002716,GO:0002819,GO:0002821,GO:0002822,GO:0002824,GO:0003674,GO:0003823,GO:0003824,GO:0005102,GO:0005215,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005765,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005793,GO:0005815,GO:0005856,GO:0005886,GO:0006629,GO:0006810,GO:0006857,GO:0006906,GO:0006950,GO:0006952,GO:0006996,GO:0007034,GO:0007041,GO:0008144,GO:0008150,GO:0008152,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009987,GO:0010033,GO:0010468,GO:0010605,GO:0010608,GO:0010629,GO:0012505,GO:0012506,GO:0015399,GO:0015405,GO:0015421,GO:0015433,GO:0015440,GO:0015630,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016192,GO:0016246,GO:0016441,GO:0016458,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019882,GO:0019883,GO:0019884,GO:0019885,GO:0022607,GO:0022804,GO:0022857,GO:0023029,GO:0030139,GO:0030176,GO:0030554,GO:0030659,GO:0030666,GO:0030670,GO:0031047,GO:0031090,GO:0031224,GO:0031227,GO:0031341,GO:0031342,GO:0031343,GO:0031347,GO:0031348,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033116,GO:0033218,GO:0033220,GO:0035194,GO:0035264,GO:0035639,GO:0035672,GO:0035673,GO:0036094,GO:0040007,GO:0040029,GO:0042175,GO:0042221,GO:0042269,GO:0042270,GO:0042277,GO:0042287,GO:0042288,GO:0042590,GO:0042605,GO:0042623,GO:0042626,GO:0042802,GO:0042803,GO:0042824,GO:0042825,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043190,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043492,GO:0043531,GO:0043933,GO:0044085,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044451,GO:0044459,GO:0044464,GO:0045088,GO:0045335,GO:0045824,GO:0045953,GO:0046907,GO:0046967,GO:0046968,GO:0046977,GO:0046978,GO:0046979,GO:0046980,GO:0046982,GO:0046983,GO:0048002,GO:0048284,GO:0048518,GO:0048519,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0050776,GO:0050777,GO:0050778,GO:0050789,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0055085,GO:0060255,GO:0061024,GO:0061025,GO:0065003,GO:0065007,GO:0070013,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0080134,GO:0090174,GO:0097159,GO:0097367,GO:0097708,GO:0098533,GO:0098588,GO:0098796,GO:0098797,GO:0098805,GO:0098827,GO:0098852,GO:1901265,GO:1901363,GO:1902494,GO:1902495,GO:1904680,GO:1904949,GO:1990351,GO:1990668
Evalue4.02e-102
EggNOG OGsCOG1132@1|root,KOG0058@2759|Eukaryota
EC3.6.3.44
DescriptionATPase activity, coupled to transmembrane movement of substances
COG categoryV
BRITEko00000,ko00001,ko01000,ko02000,ko04090,ko04147
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionAAA ATPase domain protein
Ec32 orthologEc-23_002050.1
Exons9
Model size1316
Cds size693
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10072.143.1prot_S-firma_F_contig10072.143.1Sphaerotrichia firma ET2_F femalepolypeptideS-firma_F_contig10072 449..2678 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815532.2568421-CDS-S-firma_F_contig10072:448..5521622815532.2568421-CDS-S-firma_F_contig10072:448..552Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10072 449..552 +
1696949394.242886-CDS-S-firma_F_contig10072:448..5521696949394.242886-CDS-S-firma_F_contig10072:448..552Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10072 449..552 +
1622815532.2716005-CDS-S-firma_F_contig10072:839..10281622815532.2716005-CDS-S-firma_F_contig10072:839..1028Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10072 840..1028 +
1696949394.2561755-CDS-S-firma_F_contig10072:839..10281696949394.2561755-CDS-S-firma_F_contig10072:839..1028Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10072 840..1028 +
1622815532.2847822-CDS-S-firma_F_contig10072:1438..15861622815532.2847822-CDS-S-firma_F_contig10072:1438..1586Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10072 1439..1586 +
1696949394.2660775-CDS-S-firma_F_contig10072:1438..15861696949394.2660775-CDS-S-firma_F_contig10072:1438..1586Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10072 1439..1586 +
1622815532.2987611-CDS-S-firma_F_contig10072:2118..22341622815532.2987611-CDS-S-firma_F_contig10072:2118..2234Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10072 2119..2234 +
1696949394.2808194-CDS-S-firma_F_contig10072:2118..22341696949394.2808194-CDS-S-firma_F_contig10072:2118..2234Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10072 2119..2234 +
1622815532.3153613-CDS-S-firma_F_contig10072:2542..26781622815532.3153613-CDS-S-firma_F_contig10072:2542..2678Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10072 2543..2678 +
1696949394.2958083-CDS-S-firma_F_contig10072:2542..26781696949394.2958083-CDS-S-firma_F_contig10072:2542..2678Sphaerotrichia firma ET2_F femaleCDSS-firma_F_contig10072 2543..2678 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815532.328458-UTR-S-firma_F_contig10072:2678..28141622815532.328458-UTR-S-firma_F_contig10072:2678..2814Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10072 2679..2814 +
1696949394.3059397-UTR-S-firma_F_contig10072:2678..28141696949394.3059397-UTR-S-firma_F_contig10072:2678..2814Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10072 2679..2814 +
1622815532.3416126-UTR-S-firma_F_contig10072:3375..35911622815532.3416126-UTR-S-firma_F_contig10072:3375..3591Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10072 3376..3591 +
1696949394.3164122-UTR-S-firma_F_contig10072:3375..35911696949394.3164122-UTR-S-firma_F_contig10072:3375..3591Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10072 3376..3591 +
1622815532.3542032-UTR-S-firma_F_contig10072:3970..40221622815532.3542032-UTR-S-firma_F_contig10072:3970..4022Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10072 3971..4022 +
1696949394.3321197-UTR-S-firma_F_contig10072:3970..40221696949394.3321197-UTR-S-firma_F_contig10072:3970..4022Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10072 3971..4022 +
1622815532.3672576-UTR-S-firma_F_contig10072:4405..44921622815532.3672576-UTR-S-firma_F_contig10072:4405..4492Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10072 4406..4492 +
1696949394.3566806-UTR-S-firma_F_contig10072:4405..44921696949394.3566806-UTR-S-firma_F_contig10072:4405..4492Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10072 4406..4492 +
1622815532.3797896-UTR-S-firma_F_contig10072:5030..51621622815532.3797896-UTR-S-firma_F_contig10072:5030..5162Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10072 5031..5162 +
1696949394.3662739-UTR-S-firma_F_contig10072:5030..51621696949394.3662739-UTR-S-firma_F_contig10072:5030..5162Sphaerotrichia firma ET2_F femaleUTRS-firma_F_contig10072 5031..5162 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-firma_F_contig10072.143.1

>prot_S-firma_F_contig10072.143.1 ID=prot_S-firma_F_contig10072.143.1|Name=mRNA_S-firma_F_contig10072.143.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=231bp
MIDNVVERGDKHEFHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRV
RQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNF
VMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKL
AEAGSVAEESLGSMTTVRSFAAEGRESKEYAGKLQDNDASNPAFAAIPPS
PPMAVTMRCPRREATPTGFTPRASCCSRTS*
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mRNA from alignment at S-firma_F_contig10072:449..5162+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-firma_F_contig10072.143.1 ID=mRNA_S-firma_F_contig10072.143.1|Name=mRNA_S-firma_F_contig10072.143.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=4714bp|location=Sequence derived from alignment at S-firma_F_contig10072:449..5162+ (Sphaerotrichia firma ET2_F female)
ATGATCGACAACGTTGTCGAGCGGGGCGACAAGCACGAATTCCACCGGTC GACGTTGTACCTCGTGCTCGCCGCCGTCGCTTGCGCCACGTTCTCTGGGA TCCGGTGAGCTCACCTCTTCGGTTGGGTGTTTGTTGTTCTCTCTGCGGGG GCGGCTTCGTTTTTTCTTTTGGTTGTTGTTTGTTCTCGGAGGAGGTTGGG TCATCCGCACCTCTCGCGGATGTTCTTCTCTTTTGGCGTTGCCGTGACTC CTGTTCCTCTCGTCGTCGCCTCGCACGCCGTCTCACATGCCATGTGTCCT GTCCTGTCGCACACTCTCCGCACTCTCTCTCTCTCTCTCGCTCTCTCTCT CTCCCTCCCTCCCGCCCTCTCTTATGGGTCCTCCACGGCAGCGGTTGCAT ATTCACGATCGTGGGGGCGAGGGTGAACGTGCGGGTGCGGCAGCGGTTGT TCGAGTCGCTCGTCCGCCAGGAGATCGGCTTCTTCGACACCACCAAGACT GGCGACCTCACCAGCAGGCTCTCCTCCGACTGCACCAAGGTCGGCGACCA GGTCACCGTGAACGTCAACGTCTTCTTGAGGTGAGGAGGAGGGGGTCCGG TGGACGGTACAGACAAAACGAGAGGCGTACTGTAGAGCCTAGGGGGGGTT GTGATCGGATTTGATTGAGGGGAGGTGCGAGTCTCCGGCAGGGATGGTGG GTCTTGTTGAGGCAGGCCCGGTGTTCGACAGGATGGCCATCTAGGAAGGC AAGAAGATAGGCGAACCGAAAAAACTTCTGACCTGTCGGGGTGCGGTGAG GTGAGCGACGACGCGAACGCCTTTTGAGGTGGGCGGGGCGGGTAGCTTGA GCAGCCGCTGGTCTCGAGAGTGGCCGTGCGTTGCGCAACATCGGCTGAAG AAGGCGTATATTTTTGTGGATTGAAGACGCTCCACGATGTCTAGCATACT AAACCCTCGTCCGCTGTGTATCGATCGACCCCTCGAACAGAAATTTCGTG ATGGTGGTGGTGACGCTGCTGTTCATGTTCTACCTCTCGTGGCGCCTCTC CCTCGTGGCGTTCATCTCTGTGCCCGCGATCGTCACGGTGTCCAAGTTGT ACGGCAACTACATCAGGAAACTCTCGAAATTGTCGCAGGTACAGGTCAAG TTGTGCCCCATAACCCCTCCGCACAATTGTTTTTTGTGCGTGTGGACCAT GAACTCCTTATTCACGCTGGGAGACGTTAAATGCAGGAATATATAGAGTA TGTAGTGTTTGATGTGCCAGACGAGGACATGAGGGTTAGTCGGGCTGGGC CTGTGAGTGCACAGAGGGATACAGCGCAAGTGCACTTATATGAGAACAAC AGCAGCGACAAAGGCCAGCAGTTCCGCGTCGTCAACGTGTGTCTTCGCCA ACCACCATATCGGCTGCGGATGTGAGAGTTTGTAGCACCGTTAAGAGTTT GGACACCAGCAGCTAAGAAAAAAACAGCAACCGACGCTGCCTACTGCTGT ATCTACCCATCGAACTCATTGTGCATGGCGAGGAACTGCCCCCTCCTTCT CTCCCATATTCAAAGCGGGGGCGAGGAAGTAAGGTGGAGCCGGGGTTCCT CCGGACTCTATTTTTTAACAAGCTCAACTGCTGTATCGTTAACCGTTGGT GACGCCACTAACACTAACAGGACAAGCTGGCGGAAGCGGGTTCGGTTGCA GAGGAGAGCCTGGGCAGCATGACGACGGTCAGGTCCTTCGCGGCCGAGGG GAGGGAGAGCAAGGAGTACGCCGGCAAGCTGCAAGAGTGAGTCCTGTGTT TGTTTTCTTCACCGTAAAGAATAAAACGTTCCGAATGCTGCCGTACACAC ATTTTTGACAAGATGTGTGTGTTTGGCTATAAACCATATTGGCAACAGCA GCACCAGAACCAGATCAGCCAGGCGCATGAATAGGATCGCCGCCCCCTTC CGAAAACCGTCCGTTTTCAATCGTCAATCGGGTTGCAGAGTCGTGTCAAT ATTTGCGTTTGTTACCACCGAACACGATCCCATGCTCCCTGCGTATGTAA TATATATCGTTGTCGTGTTTCCTCCCCGCAACACGCTTTGCTAGCAATGA CGCTTCGAACCCCGCCTTTGCCGCCATCCCACCGTCGCCACCGATGGCAG TTACTATGCGCTGTCCAAGAAGGGAGGCTACGCCTACGGGTTTTACGCCT CGAGCTTCGTGCTGCTCCCGAACCTCGTGACGGCCGTGGTGCTGTTCTAC GGCGGCCAGCTGGTGATGCAGGGGGAGATCACGGGAGGCAAGGTCGTGAG CTTCATGATCTACCTGACGTCGCTGTCGGACGGCTTCAACGACATGGCCT CCATTTTCTCCTCCATGTACGTCATATCATGTCATGTCGTGTCCTGTGGG GGGCTTGTTTGTTGTTTGCTGGCGCGTGCTTTGGTTCTCGTCGGGCGGTT TGCGGTTTATTTCGGTGTCCTTTCAAGTCTACGGCGTGGGTGAGGGATGG GGTGAGATGTTTGTTGGCTCTAGTTTCTCTTAGCTCAATTTTAAATATAA GAAGAGCTATCTGACCGCAGCCCAGGCGAAGATCTGAGAATGGTGTCGAG GCACCGGATCGTTTTGTCCGCGTGGCCTCCACCGCACGTATACCTATGTA AGGACTTGCTGTCTCTTGACCCCCTGGTATTTAAGGGGGGAGAAACATCG TTCTTGATTCGAGCAAAACCCCTTGTCCTCCACCGTCCGCCCTGCTATCC TATCCCGCCCCGTCCTCTCTCACCATATCCTATCTTGTCCTACCCTGTCC TGTCCTTCTTGCCCTACCCCGTCCTTTACGCGCTGCACCCGGCGCACCCC CCGAACGCTTGCTTAAACGGCCGGCCCATCTCACCACTTGGCTTTGACGT CACCCACGAAACTCACTCCGTCACCAGGACGCAGGCGGTGGGGGCGGCAG ACAAGGTTTTCGAGCTCATCAGCAGGGAGCCTAAGGGGGCGACGCCGACG GGAACACCCCCCCCCGCCGAGATGGGGATGCGGTCCGGCCCAGACGCGAT AGCGGCGGCGGAGGCGGCGGCCGCGGGCGAGAAGCCGGACTTTTGTCTCG GGGCTGTGGAGCTCAGGAACGTGGATTTCGAGTATCCGTCGAGGTAGGCG GAGCATGGAGAGAGGAGATTGGATTTCTGTCGTACATGGTATGTTTTTTT GTTCTCGTCGGCATGTGTTTTTTTATAGGGCGTGGTTTTGTCTGTTGTTT CGTGGTGGTGTGCGTCTTGTACGCTGTCATTTTGTTGCCTGGTTGGTAGT TCTTGCCTGCTGTTGAGGATTTTGAGGCGAATGTACGCGGCACGCCTTCT CCTCGTGCAAACATACCTTGACGGACTCCACCCGCTGCATGTGATACTGT TGTGTGCTACGAGCATCCGCATCTCTCCCCGTCCCTGTTTTTTGCTCTGT CGACACCCCTGTCTAACCCACGTCGTTGTTCTGTCTGATGTGTGGGGGGG GTGGTCCGTGGTTGTTTCACAGACCTGGAAGAAGAATTCTCGACGGGGTC AGCTTTAACGCCGCCGCCGGACAGGTAAAGCACCGCAACAGACACATGCA GCGCAGCAGGTTGCATGAAGCAGCCAACCCTCCGTGGGAGAAAACAATCG TTGCGAGAGTGGAGATGTAGATGGCGGCCAGTCGAAGGCCGAAAGAAGCG GGCGTTGTCGTGTGTATTCGGCAATCACCTCCTAGAGCCTCCAACTGTTG GTGCCTCTTAGATGTGATGGTGACAACAGGGCTCGGTCCCGAAAGGGTTG GATTGTTCAACGGGAAGAGAATGACCCCAACGTACGTAGGCAGCAGCAAT AGGTTGCGCCCCCCCCCCCCTTGGCGGCTGAAGCGAATGAAGTGGCTCAC GCATGTTCCTGTTGTTCATCGCTGACCTTGACCTTCGCCTTGACGAATCG ATATCAGGTGCTGGCGTTGGTCGGCCCATCTGGCGGCGGCAAGAGCTCGT GCATCGCTCTGTTGGAGAACCTTTACCACCCATCGAGGGGCCAGGTGAGA GGAGAGGAGGGAAAAACGAACAAGCAAACAGCAGCCGCAGCAGCAGCAAC AACCACAAAAAATGATAGGAAAACCCCGGCCGGCTGCTGTTGTTCCGCGG GAGATATGTCGTTTCGGCTTAACTTGCCGGGGCGACATTGCACGGAGGCG GTCTTGGTAAAGTTAACAGTCTCCGGCAATCAATCTGCGCGGAATCCTAC GTGCAGCTGCTGGGTCTGTCCTACAATTTCCTATCGTCTTGTGCAACGGG TAGATATCTTCTTTAACTATGATATGTTCTTGTTGTGCGAGTTGTCGCGA GGCATCCACCCCCGGTTGGTTGGTTGTCACATCAAGTGTTTCGTACCAGC ATACCTACCTACATTCGTTGGATTCCCAAGAAGCCGGTATTCAAACTGGC GCGTGTGTTTTGCCTTATTTTTACCTTTTTACCGGGTGTGAAGGTCAAGG TAGGGTGATGAGATGCGACCGTCGTTTTTCGTGCGTATTCCAATAAAACT TGTTTCTGATGGCCCGACCTTTCCGTGCGCAGGTGATGCTGGACGGGCTT GCGGTACACAAATATGACCACCACTGGCTGCACCGGAACATCTCCATCGT GGGCCAGGAGCCGACCCTGTACGCTCGCAGCATAAGAGAGAACATCATCT ACGGCCTTGAAGGT
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Coding sequence (CDS) from alignment at S-firma_F_contig10072:449..5162+

>mRNA_S-firma_F_contig10072.143.1 ID=mRNA_S-firma_F_contig10072.143.1|Name=mRNA_S-firma_F_contig10072.143.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1386bp|location=Sequence derived from alignment at S-firma_F_contig10072:449..5162+ (Sphaerotrichia firma ET2_F female)
ATGATCGACAACGTTGTCGAGCGGGGCGACAAGCACGAATTCCACCGGTC
GACGTTGTACCTCGTGCTCGCCGCCGTCGCTTGCGCCACGTTCTCTGGGA
TCCGATGATCGACAACGTTGTCGAGCGGGGCGACAAGCACGAATTCCACC
GGTCGACGTTGTACCTCGTGCTCGCCGCCGTCGCTTGCGCCACGTTCTCT
GGGATCCGCGGTTGCATATTCACGATCGTGGGGGCGAGGGTGAACGTGCG
GGTGCGGCAGCGGTTGTTCGAGTCGCTCGTCCGCCAGGAGATCGGCTTCT
TCGACACCACCAAGACTGGCGACCTCACCAGCAGGCTCTCCTCCGACTGC
ACCAAGGTCGGCGACCAGGTCACCGTGAACGTCAACGTCTTCTTGAGCGG
TTGCATATTCACGATCGTGGGGGCGAGGGTGAACGTGCGGGTGCGGCAGC
GGTTGTTCGAGTCGCTCGTCCGCCAGGAGATCGGCTTCTTCGACACCACC
AAGACTGGCGACCTCACCAGCAGGCTCTCCTCCGACTGCACCAAGGTCGG
CGACCAGGTCACCGTGAACGTCAACGTCTTCTTGAGAAATTTCGTGATGG
TGGTGGTGACGCTGCTGTTCATGTTCTACCTCTCGTGGCGCCTCTCCCTC
GTGGCGTTCATCTCTGTGCCCGCGATCGTCACGGTGTCCAAGTTGTACGG
CAACTACATCAGGAAACTCTCGAAATTGTCGCAGAAATTTCGTGATGGTG
GTGGTGACGCTGCTGTTCATGTTCTACCTCTCGTGGCGCCTCTCCCTCGT
GGCGTTCATCTCTGTGCCCGCGATCGTCACGGTGTCCAAGTTGTACGGCA
ACTACATCAGGAAACTCTCGAAATTGTCGCAGGACAAGCTGGCGGAAGCG
GGTTCGGTTGCAGAGGAGAGCCTGGGCAGCATGACGACGGTCAGGTCCTT
CGCGGCCGAGGGGAGGGAGAGCAAGGAGTACGCCGGCAAGCTGCAAGAGA
CAAGCTGGCGGAAGCGGGTTCGGTTGCAGAGGAGAGCCTGGGCAGCATGA
CGACGGTCAGGTCCTTCGCGGCCGAGGGGAGGGAGAGCAAGGAGTACGCC
GGCAAGCTGCAAGACAATGACGCTTCGAACCCCGCCTTTGCCGCCATCCC
ACCGTCGCCACCGATGGCAGTTACTATGCGCTGTCCAAGAAGGGAGGCTA
CGCCTACGGGTTTTACGCCTCGAGCTTCGTGCTGCTCCCGAACCTCGTGA
CAATGACGCTTCGAACCCCGCCTTTGCCGCCATCCCACCGTCGCCACCGA
TGGCAGTTACTATGCGCTGTCCAAGAAGGGAGGCTACGCCTACGGGTTTT
ACGCCTCGAGCTTCGTGCTGCTCCCGAACCTCGTGA
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