prot_S-firma_F_contig10072.143.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10072.143.1
Unique Nameprot_S-firma_F_contig10072.143.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length231
Homology
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: D7G0W4_ECTSI (ABC transmembrane type-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0W4_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 2.450e-101
Identity = 168/194 (86.60%), Postives = 178/194 (91.75%), Query Frame = 0
Query:    1 MIDNVVERGDKHEFHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRVRQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESKEYAGKLQDNDASNPAF 194
            MIDNVVE G   EF RST+YLVLAAV+CA FSGIRGCIF++VGARVNVRVR+RLFESLVRQEIGFFDTTKTGDLTSRL+SDCTKVGDQVT+NVNVFLRN VMVVVTLLFMFYLSWRLSLVAFISVPAIV VSK YG YIRKLSKLSQDKLAEAGSVAEESLGSM+TVRSFAAEGRESKEYA KLQD   ++P  
Sbjct:  113 MIDNVVEGGGDSEFRRSTVYLVLAAVSCAIFSGIRGCIFSVVGARVNVRVRRRLFESLVRQEIGFFDTTKTGDLTSRLASDCTKVGDQVTLNVNVFLRNLVMVVVTLLFMFYLSWRLSLVAFISVPAIVIVSKWYGEYIRKLSKLSQDKLAEAGSVAEESLGSMSTVRSFAAEGRESKEYAKKLQDRTPTSPTL 306          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A835YSY9_9STRA (ABC transporter type 1, transmembrane domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSY9_9STRA)

HSP 1 Score: 242 bits (618), Expect = 9.500e-73
Identity = 126/186 (67.74%), Postives = 156/186 (83.87%), Query Frame = 0
Query:    1 MIDNVVERGDKHEFHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRVRQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESKEYAGKLQD 186
            M+  VV+RG + +F  + + LV AA+ CA F+G+RG +FT+VG+RVNVR+RQ LF+SLVRQEIGFFDTTKTG++TSRLS+DCTKVGDQV +N+N+FLRNFV    TLLFMFYLSWRLS VAF+SVPAIV VS+ YG++IR L+K  Q++LAEA +VAEE+LGSMTTVRSFAAEGRES  Y  +L D
Sbjct:  107 MVAAVVDRGREADFRPAAVRLVGAAIVCAIFTGVRGGLFTLVGSRVNVRIRQMLFDSLVRQEIGFFDTTKTGEITSRLSADCTKVGDQVCLNINLFLRNFVQAAGTLLFMFYLSWRLSTVAFVSVPAIVGVSRYYGHFIRDLAKQVQERLAEANAVAEEALGSMTTVRSFAAEGRESAAYGARLHD 292          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: W7TKE5_9STRA (Atp-binding cassette sub-family b member 9 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKE5_9STRA)

HSP 1 Score: 211 bits (537), Expect = 1.450e-59
Identity = 111/185 (60.00%), Postives = 138/185 (74.59%), Query Frame = 0
Query:    2 IDNVVERGDKHEFHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRVRQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESKEYAGKLQD 186
            ID +V       F  + + LVL A  C   +G+RG IFTIVGARVN R+R  LF+SL+RQE+GFFDT KTGDL+SRLSSDCTKVGDQV++N+N FLR+ V  V TL+FMF  SW+LSLVAF+SVP IV +SK+YG YIRKLSK +Q++LA A S+AEE L +M TVRSFA    + + Y GKL +
Sbjct:  384 IDAIVSEEGAAAFQHAMVMLVLCAAVCGACTGLRGAIFTIVGARVNRRIRDMLFQSLIRQEVGFFDTAKTGDLSSRLSSDCTKVGDQVSLNINFFLRSLVQAVGTLIFMFIQSWKLSLVAFVSVPVIVIMSKIYGQYIRKLSKATQERLAHANSIAEECLSTMPTVRSFAGGPAQGRLYRGKLDE 568          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A7S2PB77_9STRA (Hypothetical protein (Fragment) n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PB77_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.010e-51
Identity = 98/167 (58.68%), Postives = 130/167 (77.84%), Query Frame = 0
Query:   14 FHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRVRQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESKEY 180
            F  +   LV+AA+ CA FSG+RG IFT++G RVN R+R +L +SL+ QEIGFFDTTKTGD+TSRL SD T VGDQVT+NVNVFLR+FV  +  L+FMF +SWRL+++  +SVPAI  +SKLYG ++RKL+KL Q KLA+  +++E ++ SM TVR+F AE  E +EY
Sbjct:  429 FRSNIQKLVIAALLCALFSGLRGGIFTLIGGRVNSRLRLKLMDSLLAQEIGFFDTTKTGDITSRLCSDTTMVGDQVTLNVNVFLRSFVQAIGVLVFMFLVSWRLTMLVLLSVPAITIMSKLYGAFMRKLTKLMQKKLADGNTISEAAISSMPTVRAFGAEMAELREY 595          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A7S2KWJ3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KWJ3_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.520e-51
Identity = 98/167 (58.68%), Postives = 130/167 (77.84%), Query Frame = 0
Query:   14 FHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRVRQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESKEY 180
            F  +   LV+AA+ CA FSG+RG IFT++G RVN R+R +L +SL+ QEIGFFDTTKTGD+TSRL SD T VGDQVT+NVNVFLR+FV  +  L+FMF +SWRL+++  +SVPAI  +SKLYG ++RKL+KL Q KLA+  +++E ++ SM TVR+F AE  E +EY
Sbjct:  168 FRSNIQKLVIAALLCALFSGLRGGIFTLIGGRVNSRLRLKLMDSLLAQEIGFFDTTKTGDITSRLCSDTTMVGDQVTLNVNVFLRSFVQAIGVLVFMFLVSWRLTMLVLLSVPAITIMSKLYGAFMRKLTKLMQKKLADGNTISEAAISSMPTVRAFGAEMAELREY 334          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: B7FY43_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FY43_PHATC)

HSP 1 Score: 185 bits (470), Expect = 2.620e-51
Identity = 101/160 (63.12%), Postives = 124/160 (77.50%), Query Frame = 0
Query:   21 LVLAAVACATFSGIRGCIFTIVGARVNVRVRQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESKEY 180
            LVLA+V    FSG+RG +FT+VG RVNVR+R +L +SL+ Q+IGFFDTTKTGD+TSRLSSD T VGDQVT+NVNVFLR+ V     LL MF +SW+LS++AFISVP I  +SK YGNY+R L+KL Q KLA+  SV+E + GSM TVRSF A   E KE+
Sbjct:   14 LVLASVLAGVFSGLRGSVFTVVGGRVNVRLRIQLMDSLLSQDIGFFDTTKTGDITSRLSSDTTLVGDQVTLNVNVFLRSLVQAFGVLLCMFLISWQLSILAFISVPLITILSKWYGNYVRSLTKLMQKKLADGNSVSEAAFGSMPTVRSFDAAEAELKEF 173          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A7S2PB08_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PB08_9STRA)

HSP 1 Score: 187 bits (475), Expect = 6.170e-51
Identity = 98/167 (58.68%), Postives = 130/167 (77.84%), Query Frame = 0
Query:   14 FHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRVRQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESKEY 180
            F  +   LV+AA+ CA FSG+RG IFT++G RVN R+R +L +SL+ QEIGFFDTTKTGD+TSRL SD T VGDQVT+NVNVFLR+FV  +  L+FMF +SWRL+++  +SVPAI  +SKLYG ++RKL+KL Q KLA+  +++E ++ SM TVR+F AE  E +EY
Sbjct:  428 FRSNIQKLVIAALLCALFSGLRGGIFTLIGGRVNSRLRLKLMDSLLAQEIGFFDTTKTGDITSRLCSDTTMVGDQVTLNVNVFLRSFVQAIGVLVFMFLVSWRLTMLVLLSVPAITIMSKLYGAFMRKLTKLMQKKLADGNTISEAAISSMPTVRAFGAEMAELREY 594          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A7S0IUH6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IUH6_9EUKA)

HSP 1 Score: 177 bits (450), Expect = 2.000e-50
Identity = 96/180 (53.33%), Postives = 127/180 (70.56%), Query Frame = 0
Query:    1 MIDNVVERGDKHEFHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRVRQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESKEY 180
            +ID +V   D   F R  + LV AA     F+G RG  F ++G R  VR+RQRLF+SL++QE  FF   KTGD+TSRLS+DC KV DQV +NVNVFLR+ + V+ T  FM +LSWRL++  FI VPAIV +SK++G+++R L+K SQ+ LA A S AEE + SM TVR+FAAEG +S+ Y
Sbjct:   29 VIDAIVIGKDTDAFVRYMILLVCAAFVTGIFTGFRGSTFIVIGGRFGVRLRQRLFDSLLQQEADFFGAVKTGDITSRLSADCEKVSDQVQLNVNVFLRSVIQVLFTFGFMVFLSWRLAITCFIVVPAIVVLSKIFGDFMRALTKDSQEALANANSTAEEVISSMNTVRAFAAEGEDSRRY 208          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A7S3WHJ6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WHJ6_9SPIT)

HSP 1 Score: 180 bits (457), Expect = 3.930e-50
Identity = 99/176 (56.25%), Postives = 126/176 (71.59%), Query Frame = 0
Query:   10 DKHEFHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRVRQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESKEYAGKLQ 185
            ++  F +  + L++A V    FS  RG  F  +G++V+VR+R  LF++L  QEIGFFDTTKTG+LTSR++ DC KV DQVT+NVNVFLR  V  V TLLFMF LS +L++VAFISVP    +SK YG  +RKLS+ +Q  LA+A SVAEE L SM+TVRSFAAE  ES  +  KLQ
Sbjct:  254 EERPFTQPVMMLMIAGVCSGVFSACRGATFITIGSKVSVRLRHSLFDALASQEIGFFDTTKTGELTSRMTQDCQKVSDQVTLNVNVFLRTLVQTVTTLLFMFTLSMQLTVVAFISVPITAVISKKYGGVMRKLSEKTQKSLADANSVAEEVLSSMSTVRSFAAENLESDRFGTKLQ 429          
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Match: A0A7S2LSV3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2LSV3_9DINO)

HSP 1 Score: 176 bits (446), Expect = 5.770e-50
Identity = 98/171 (57.31%), Postives = 120/171 (70.18%), Query Frame = 0
Query:   14 FHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRVRQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNFVMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKLAEAGSVAEESLGSMTTVRSFAAEGRESKEYAGKL 184
            F    + L++ A  C   S  RG  F  +GAR +VR+RQ LFESL  QEIGFFDTTKTG+LTSR++ DC KV DQVT+NVNVF R  V +  TL+FM  LS  L+ V+F+SVP IV +SK YG  +R+LS+ +Q  LAEA SVAEESL SM TVR FAAEG E+  + GKL
Sbjct:   70 FKEPAIKLLITAAFCGILSACRGATFIWIGARASVRLRQGLFESLTHQEIGFFDTTKTGELTSRMTQDCQKVTDQVTINVNVFCRTIVQMATTLVFMLSLSVPLTAVSFVSVPVIVVISKKYGGVMRELSEQTQKALAEANSVAEESLSSMATVRMFAAEGLENIRFGGKL 240          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10072.143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0W4_ECTSI2.450e-10186.60ABC transmembrane type-1 domain-containing protein... [more]
A0A835YSY9_9STRA9.500e-7367.74ABC transporter type 1, transmembrane domain-conta... [more]
W7TKE5_9STRA1.450e-5960.00Atp-binding cassette sub-family b member 9 n=1 Tax... [more]
A0A7S2PB77_9STRA1.010e-5158.68Hypothetical protein (Fragment) n=2 Tax=Leptocylin... [more]
A0A7S2KWJ3_9STRA1.520e-5158.68Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B7FY43_PHATC2.620e-5163.13Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A7S2PB08_9STRA6.170e-5158.68Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S0IUH6_9EUKA2.000e-5053.33Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S3WHJ6_9SPIT3.930e-5056.25Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S2LSV3_9DINO5.770e-5057.31Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036640ABC transporter type 1, transmembrane domain superfamilyGENE3D1.20.1560.10coord: 1..196
e-value: 1.4E-60
score: 207.3
IPR036640ABC transporter type 1, transmembrane domain superfamilySUPERFAMILY90123ABC transporter transmembrane regioncoord: 1..187
IPR011527ABC transporter type 1, transmembrane domainPFAMPF00664ABC_membranecoord: 1..187
e-value: 1.1E-47
score: 163.0
IPR011527ABC transporter type 1, transmembrane domainPROSITEPS50929ABC_TM1Fcoord: 1..187
score: 40.285
IPR030254ATP-binding cassette subfamily B member 9PANTHERPTHR24221:SF242ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 9coord: 2..186
IPR039421Type I protein exporterPANTHERPTHR24221FAMILY NOT NAMEDcoord: 2..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..136
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 137..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..94
NoneNo IPR availableTMHMMTMhelixcoord: 117..139
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10072contigS-firma_F_contig10072:449..2678 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10072.143.1mRNA_S-firma_F_contig10072.143.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10072 449..5162 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10072.143.1 ID=prot_S-firma_F_contig10072.143.1|Name=mRNA_S-firma_F_contig10072.143.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=231bp
MIDNVVERGDKHEFHRSTLYLVLAAVACATFSGIRGCIFTIVGARVNVRV
RQRLFESLVRQEIGFFDTTKTGDLTSRLSSDCTKVGDQVTVNVNVFLRNF
VMVVVTLLFMFYLSWRLSLVAFISVPAIVTVSKLYGNYIRKLSKLSQDKL
AEAGSVAEESLGSMTTVRSFAAEGRESKEYAGKLQDNDASNPAFAAIPPS
PPMAVTMRCPRREATPTGFTPRASCCSRTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039421Type_I_exporter
IPR030254ABCB9
IPR011527ABC1_TM_dom
IPR036640ABC1_TM_sf