prot_S-firma_F_contig10826.1107.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10826.1107.1
Unique Nameprot_S-firma_F_contig10826.1107.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length237
Homology
BLAST of mRNA_S-firma_F_contig10826.1107.1 vs. uniprot
Match: D7G9G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G4_ECTSI)

HSP 1 Score: 358 bits (920), Expect = 2.160e-123
Identity = 178/207 (85.99%), Postives = 187/207 (90.34%), Query Frame = 0
Query:   29 RPSLAAEVMATELVDFVDSRGLFGCRIPKNFLRTERPKDKRGTVFVAGDYSKAEVISVQMVTAFDLLTDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGVQVESVVLPGAAIDSDVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNTDWDQEGGAKERLKVVADSFRLEGLVVNGVRLGA 235
            +PS AAEV ATE VDF DSRGLF CRIPKNFLR ER KDKRGTVFVAGDYSKAEV+SVQ+V  FDLLTDAGLPTIGDLTKWENVGKP  +ADLLKQRRDSDAAGG  VESVVLPG  +D DVLQF LKSPIKVMR DLLEKEQGVSELYRNTYVKAIMRGDGSFLV+WAGALNTDWDQEGGAK+RLKV  DSFRLEGL+V+GVRLGA
Sbjct:   32 QPSSAAEVAATEFVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGA 238          
BLAST of mRNA_S-firma_F_contig10826.1107.1 vs. uniprot
Match: A0A6H5KHB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB6_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 1.650e-121
Identity = 177/206 (85.92%), Postives = 185/206 (89.81%), Query Frame = 0
Query:   30 PSLAAEVMATELVDFVDSRGLFGCRIPKNFLRTERPKDKRGTVFVAGDYSKAEVISVQMVTAFDLLTDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGVQVESVVLPGAAIDSDVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNTDWDQEGGAKERLKVVADSFRLEGLVVNGVRLGA 235
            PS AAEV ATE VDF DSRGLF C IPKNFLR ER KDKRGTVFVAGDYSKAEV+SVQ+V AFDLLTDAGLPT+GDLTKWENVGKP  +ADLLKQRRDSDAAGG  VESVVLPG  +D DVLQF LKSPIKVMR DLLEKEQGVSELYRNTYVKAIMRGDGSFLV+WAGALNTDWDQEGGAK+RLKV  DSFRLEGL+V GVRLGA
Sbjct:   97 PSSAAEVAATEFVDFEDSRGLFSCLIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKAFDLLTDAGLPTVGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVEGVRLGA 302          
BLAST of mRNA_S-firma_F_contig10826.1107.1 vs. uniprot
Match: A0A835Z4Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q3_9STRA)

HSP 1 Score: 166 bits (421), Expect = 7.920e-48
Identity = 103/224 (45.98%), Postives = 135/224 (60.27%), Query Frame = 0
Query:    8 RRTAAASIAAVTGGLVASSGLRPSLAAEVMATELVDFVDSRGLFGCRIPKNFLRTERPKDK--RGTVFVAGDYSKAEVISVQMVTAFDLLTDAG-----LPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGVQVESVVLPGAAI-DSDVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNTDWDQEGGAKERLKVVADSFRL 223
            RR AA + +A+ G L+    L     AEV +  L  + DSRG F   +P N++R ER  D+  +G +FV G+Y KA  +SV ++ +  LL DAG     LPT  DLT W  VG P  +A LL  RRD DAA     +S VLP   + D + L F +K+ + V R DLLEKE+GV ELYR TY KA+MRGDG+FL+ WAGALNT+W +   A++ L  V  SF L
Sbjct:   12 RRFAAGTASAIAGVLL----LPQPTVAEVPS--LAAYSDSRGYFEISLPANWVRAERKGDQEAKGVLFVTGNYVKAITLSVAIIKSSQLLRDAGTAPLVLPT-DDLTTWAGVGTPMGIAKLLAFRRDQDAAQAAAQDSEVLPDTVVLDGNALTFMIKTRVPVQRPDLLEKERGVRELYRLTYGKALMRGDGTFLLCWAGALNTEWGEPTNARDTLAAVVASFHL 228          
BLAST of mRNA_S-firma_F_contig10826.1107.1 vs. uniprot
Match: A0A7S0QY41_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QY41_9CRYP)

HSP 1 Score: 120 bits (300), Expect = 1.220e-29
Identity = 73/177 (41.24%), Postives = 98/177 (55.37%), Query Frame = 0
Query:   34 AEVMATELVDFVDSRGL---FGCRIPKNFLRTERPKDKRGTVFVAGDYSKAEVISVQMVTAFDLLTDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGVQVESVVLPGA-AIDSDVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGALNTDWDQ 206
            A+    E   F +  GL   F   IPK F +++RP    GT+FVAG    AE++SVQ+V+   LL D G+   GDL+ WE +G    +ADLL   RD DA     + S V P + A+    L F   + I V R D L + QG+SEL R T  +A +R DG+ LVLWA AL  DW++
Sbjct:   63 ADAEVYEYSAFKEDGGLDAVFRADIPKEFFKSKRPLTN-GTIFVAGSLQTAEIVSVQIVSIPQLLADIGVLPTGDLSTWEAIGSAKAIADLLTSNRDGDAKQRGGLASKVDPASVAVSGRTLSFRTAATIAVQRPDKLLETQGISELRRITRARAEIRRDGTALVLWASALEQDWNK 238          
BLAST of mRNA_S-firma_F_contig10826.1107.1 vs. uniprot
Match: K0RXZ5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RXZ5_THAOC)

HSP 1 Score: 111 bits (278), Expect = 4.780e-26
Identity = 81/231 (35.06%), Postives = 116/231 (50.22%), Query Frame = 0
Query:    8 RRTAAASIAAVTGGLVASSGLRPSLAAEVMATELVDFVDSRG--LFGCRIPKNFLRTER------PKDKRG------TVFVAGDYSKAEVISVQMVTAFDLLTDAGLPTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGVQVESVVLPGAAIDSD--VLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRG-DGSFLVLWAGALNTDWDQEGGAKERLKVVADSF 221
            RR   AS  +    + AS     +LA E     +  FVD+    LF   +P+ F    R      P +K G      T+F AGD SKAEV++V+      LL + G   +GDL+ +E +G PT +A LL +RR+ D  G V V  +      +  D   L+FT+K  I V + +LL +E GVS L+R T  KA +   DG+ LV++A AL+ D+    G    L+   DSF
Sbjct:   44 RRAMVASTLSAAVSVAASK----ALAEEATDVPMKLFVDTANPSLFAINVPQRFFAIRRSAKGDLPDEKTGKGRRGGTIFSAGDMSKAEVVAVERFPVKVLLEEEGYSPLGDLSTFEAIGDPTAIATLLLRRREKDRPGNVSVAVLDKDSVVVTEDGKTLKFTMKQEISVQKPELLMEEMGVSRLFRTTVAKATLSSNDGNLLVVFASALDQDFSGPDGVA--LRKTVDSF 268          
BLAST of mRNA_S-firma_F_contig10826.1107.1 vs. uniprot
Match: A0A7S2MYB7_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MYB7_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 3.510e-13
Identity = 60/200 (30.00%), Postives = 96/200 (48.00%), Query Frame = 0
Query:   45 VDSRGLFGCRIPKNFLRTERPKDKRGTVFVAGDYSKAEVISVQMVTAFDLLTD-------AGLPTIGDLTK------WENVGKPTVVADLLKQRRDSDAAGGVQVESVVLPGAAIDSDVLQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMR----GDGS----FLVLWAGALNTDWDQEGGAKERLKVVADSFRL 223
            +D+   F   IP +F+ ++R K   GT+FVAG++ +A VISV       LL D        GLP    + +      + ++G    VA LL + RD DA+ G    ++ L   + D   L+F   + + V   D LE+++GV +L R T   +++     GDG+       +W  AL  DWD++   K  L+    SF +
Sbjct:   45 LDAASRFALDIPDDFVVSKR-KAVTGTLFVAGNFPRASVISVTAWPLDALLQDDARSRALPGLPQELVIAEHATPLSFTDIGSAKSVAQLLLRARDRDASSGALQSALTLSQLSSDGSRLEFECATELPVSDPDALEEQRGVRQLIRRTRAASVLGSVPGGDGAPVPALFSVWGSALEQDWDKD--LKAPLEKTVSSFSV 241          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10826.1107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G9G4_ECTSI2.160e-12385.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHB6_9PHAE1.650e-12185.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z4Q3_9STRA7.920e-4845.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0QY41_9CRYP1.220e-2941.24Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
K0RXZ5_THAOC4.780e-2635.06Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2MYB7_9EUKA3.510e-1330.00Hypothetical protein n=1 Tax=Haptolina brevifila T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..236
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10826contigS-firma_F_contig10826:1663..3692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10826.1107.1mRNA_S-firma_F_contig10826.1107.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10826 996..4682 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10826.1107.1 ID=prot_S-firma_F_contig10826.1107.1|Name=mRNA_S-firma_F_contig10826.1107.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=237bp
MDRVKFLRRTAAASIAAVTGGLVASSGLRPSLAAEVMATELVDFVDSRGL
FGCRIPKNFLRTERPKDKRGTVFVAGDYSKAEVISVQMVTAFDLLTDAGL
PTIGDLTKWENVGKPTVVADLLKQRRDSDAAGGVQVESVVLPGAAIDSDV
LQFTLKSPIKVMRTDLLEKEQGVSELYRNTYVKAIMRGDGSFLVLWAGAL
NTDWDQEGGAKERLKVVADSFRLEGLVVNGVRLGAA*
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