mRNA_S-firma_F_contig1061.836.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1061.836.1 vs. uniprot
Match: A0A8J9UWK9_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UWK9_BRAAE) HSP 1 Score: 100 bits (250), Expect = 1.380e-21 Identity = 58/161 (36.02%), Postives = 89/161 (55.28%), Query Frame = 1
Query: 19 PLLQAVEAGRVAELKYLLRAGADVNVRSPFNGSTALHLAAIHGRSRIASTLLKLGADTDALDEVGETPLMKAAELGHQPVVETLLKAGSNVHVFSYGRGRAALHFAAGEGHYGVVLALLDHRADKNAQDVSGFTALVLATAQGSLPTVKILLKAGADLTIR 501
PL+ AV+ +YL+ GADVN+R + TALH+A + G +A+ L+ GAD +A D G +PLM A H VE L+ G++V++ R ALH AA G+ + L+ + AD NAQD++G++ L+ A T + L+ G D+ +R
Sbjct: 3731 PLIFAVDNNHTKITEYLINHGADVNLRGSKDNRTALHVAGLTGNVEMANVLVSNGADINAQDINGYSPLMFAVYKNHTETVEFLINQGADVNLRGSKDNRTALHVAAATGNIEMSNVLVSNGADINAQDINGYSPLMFAVDNNHPETAEFLINQGVDVNLR 3891
BLAST of mRNA_S-firma_F_contig1061.836.1 vs. uniprot
Match: D7FVI9_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVI9_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 2.890e-17 Identity = 54/128 (42.19%), Postives = 76/128 (59.38%), Query Frame = 1
Query: 115 STALHLAAIHGRSRIASTLLKLGADTDALDEVGETPLMKAAELGHQPVVETLLKAGSNVHVFSYGRGRAALHFAAGEGHYGVVLALLDHRADKNAQDVSGFTALVLATAQGSLPTVKILLKAGADLTI 498
+T L AA G + + LL+ D D D+ G TPLMKAAE GH PV+ETLL G++ G ++ AA G+ +V+ALL+ ADK++ +G T L+ A+ +G LP VK LL A AD+T+
Sbjct: 55 TTTLGFAASEGNNHMVRCLLRW-KDKDEQDQFGYTPLMKAAENGHMPVMETLLDQGADATFRHLDDGSTSIIAAALGGYNEIVIALLNKGADKDSPAANGRTPLMEASRKGHLPVVKTLLNADADVTL 181
BLAST of mRNA_S-firma_F_contig1061.836.1 vs. uniprot
Match: UPI001B3F70E5 (ankyrin repeat domain-containing protein n=1 Tax=Duganella sp. 1411 TaxID=2806572 RepID=UPI001B3F70E5) HSP 1 Score: 84.7 bits (208), Expect = 3.330e-17 Identity = 57/166 (34.34%), Postives = 90/166 (54.22%), Query Frame = 1
Query: 7 EPEPPLLQAVEAGRVAELKYLLRAGADVNVRSPFNGSTALHLAAIHGRSRIASTLL-KLGADTDALDEVGETPLMKAAELGHQPVVETLLKAGSNVHVFSYGRGRAALHFAAGEGHYGVVLALLDHRADKNAQDVSGFTALVLATAQGSLPTVKILLKAGADLTIR 501
+ E +A + V+ +K +L G + N R P NG T L +A + R+ + L+ + G D +A G T LM AA ++PVV ++K G+ V+ +G ALH+AA G + LL+H A +A+ SG T L++A +G V++LLK GAD T++
Sbjct: 17 DDEVAFFRAAQLDNVSGVKKVLARGLNPNTRDP-NGETGLIVAMRYEAVRVGTLLMDQPGIDLEAKAPNGNTALMMAAFRQNKPVVLDMIKRGAQVNQ----KGWTALHYAAAAGSVEITSILLEHHAYIDAESPSGMTPLMMAAREGQEQVVELLLKEGADATLK 177
BLAST of mRNA_S-firma_F_contig1061.836.1 vs. uniprot
Match: A0A1H8JUZ4_9BURK (Uncharacterized protein n=1 Tax=Duganella sp. CF517 TaxID=1881038 RepID=A0A1H8JUZ4_9BURK) HSP 1 Score: 84.3 bits (207), Expect = 6.110e-17 Identity = 58/166 (34.94%), Postives = 91/166 (54.82%), Query Frame = 1
Query: 7 EPEPPLLQAVEAGRVAELKYLLRAGADVNVRSPFNGSTALHLAAIHGRSRIASTLL-KLGADTDALDEVGETPLMKAAELGHQPVVETLLKAGSNVHVFSYGRGRAALHFAAGEGHYGVVLALLDHRADKNAQDVSGFTALVLATAQGSLPTVKILLKAGADLTIR 501
+ E +AV+ VA +K +L G + N R P G T L LA H +A+ L+ + G D +A G T LM AA ++P+V ++K G++V+ +G ALH+AA G + LL+ A +A+ SG T L++A +G+ V++LLK GAD T++
Sbjct: 31 DDEVAFFRAVQVDYVAGVKKVLARGLNPNARDP-GGETGLILAMRHEAVNVATVLMDQPGIDLEAKAPNGNTALMMAAFRQNKPMVLDMIKRGAHVNQ----KGWTALHYAAAAGSVEITNILLEQHAYIDAESPSGMTPLMMAAREGAEQVVELLLKQGADATLK 191
BLAST of mRNA_S-firma_F_contig1061.836.1 vs. uniprot
Match: UPI0003007EBE (ankyrin repeat domain-containing protein n=1 Tax=Noviherbaspirillum massiliense TaxID=1465823 RepID=UPI0003007EBE) HSP 1 Score: 82.8 bits (203), Expect = 2.810e-16 Identity = 57/159 (35.85%), Postives = 84/159 (52.83%), Query Frame = 1
Query: 31 AVEAGRVAELKYLLRAGADVNVRSPFNGSTALHLAAIHGRSRIASTLLKL-GADTDALDEVGETPLMKAAELGHQPVVETLLKAGSNVHVFSYGRGRAALHFAAGEGHYGVVLALLDHRADKNAQDVSGFTALVLATAQGSLPTVKILLKAGADLTIRS 504
AV V L+ LL G D N+ P G + L +A ++ + LL D +A G+T LM A+ LG++P E LL G+ V+ G ALH+AA G G+V LL + A NA+ + T +++A G + TVK+LL AGAD T+++
Sbjct: 49 AVRFDDVRGLRSLLAQGVDPNLAEPSRGESGLIVALREKSMKVFAVLLDTQDIDVNAQARNGDTALMIASYLGNEPAAEALLARGAQVNR----PGWTALHYAAASGSDGIVQLLLKNSAYINAESPNKTTPIMMAAYMGHIQTVKLLLDAGADATLKN 203
BLAST of mRNA_S-firma_F_contig1061.836.1 vs. uniprot
Match: A0A2E9FXI6_9RHOB (Uncharacterized protein n=1 Tax=Thalassobius sp. TaxID=1979401 RepID=A0A2E9FXI6_9RHOB) HSP 1 Score: 80.1 bits (196), Expect = 1.240e-15 Identity = 52/151 (34.44%), Postives = 77/151 (50.99%), Query Frame = 1
Query: 16 PPLLQAVEAGRVAELKYLLRAGADVNVRSPFNGSTALHLAAIHGRSRIASTLLKLGADTDALDEVGETPLMKAAELGHQPVVETLLKAGSNVHVFSYGRGRAALHFAAGEGHYGVVLALLDHRADKNAQDVSGFTALVLATAQGSLPTVKI 468
PP+ A++ V +++ +L +G D S +TALH AA +G +I L+ GAD +A++E G+TPL A H VE LL G+++ ALH AA +G Y V ALL A+ A+D +G + A A VK+
Sbjct: 33 PPIFTAIQRNNVQQVESMLDSGTDPG-SSDMLRNTALHQAAFYGYEKIIELLVAKGADINAVNEAGQTPLYSAIHADHVQAVEALLNHGASLSTKYTDNRYTALHLAALDGKYEVAEALLKKGANTKAKDANGKKPIDYAKATKDKTFVKL 182
BLAST of mRNA_S-firma_F_contig1061.836.1 vs. uniprot
Match: A0A3B3H481_ORYLA (B-cell lymphoma 3 protein n=4 Tax=Oryzias TaxID=8089 RepID=A0A3B3H481_ORYLA) HSP 1 Score: 82.8 bits (203), Expect = 2.100e-15 Identity = 56/166 (33.73%), Postives = 89/166 (53.61%), Query Frame = 1
Query: 13 EPPLLQAVEAGRVAELKYLLRAGADVNVRSPFNGSTALHLAAIHGRSRIASTLLKLGADTDALDE---VGETPLMKAAELGHQPVVETLLKAGSNVHVFSYGRGRAALHFAAGEGHYGVVLALLDHRADKNAQDVSGFTALVLATAQGSLPTVKILLKAGADLTIR 501
+ PL AV + + LL AGAD + +G TALHL + + S LL + + L+ G TPL A + GHQ + + LL AG++++ G++ L A + G+V L+++R D N Q SG TAL +A +G + V++LLK+GAD +++
Sbjct: 231 QTPLHLAVITKQATLVDALLGAGADPSALDR-HGQTALHLCCEYDQRDCLSALLSRSSSSPCLEARNFEGLTPLHMAVQQGHQDLAKMLLDAGADINAMDIKSGQSPLVHAVESNNAGMVHFLVENRCDVNRQSYSGNTALHVACGRGQVDIVRVLLKSGADSSLK 395
BLAST of mRNA_S-firma_F_contig1061.836.1 vs. uniprot
Match: A0A7S3FZE7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3FZE7_9EUKA) HSP 1 Score: 80.9 bits (198), Expect = 1.000e-14 Identity = 57/170 (33.53%), Postives = 85/170 (50.00%), Query Frame = 1
Query: 19 PLLQAVEAGRVAELKYLLRAGADVNVRSPFNGSTALHLAAIHGRSRIASTLLKLGADTDALDEVGETPLMKAAELGHQP---------VVETLLKAGSNVHVFSYGRGRAALHFAA---GEGHYGVVLALLDHRADKNAQDVSGFTALVLATAQGSLPTVKILLKAGADL 492
PL+ A G + LL GA V+ R +G+TALH+A +I +L++ GAD +A D G TPL++ A+L V+ LL G++ + R ALH+ G+ V LL AD +A+ T +V+A QG+L VK+LL+ GAD+
Sbjct: 207 PLMLASAKGSALAVDLLLEGGASVSKRKNKSGATALHIAVKGFHLQILKSLIRAGADVNATDAEGTTPLIECAKLKPSSPAQARARFLVLSFLLGEGADANKVDERHKRTALHYLCINGGDNCANAVKLLLSSGADIDARSEENLTPIVMAVHQGALQLVKLLLEQGADI 376
BLAST of mRNA_S-firma_F_contig1061.836.1 vs. uniprot
Match: UPI0018DC736B (ankyrin repeat domain-containing protein n=1 Tax=Inhella proteolytica TaxID=2795029 RepID=UPI0018DC736B) HSP 1 Score: 78.2 bits (191), Expect = 1.230e-14 Identity = 60/154 (38.96%), Postives = 80/154 (51.95%), Query Frame = 1
Query: 46 RVAELKYLLRAGADVNVRSPFNGSTALHLAAIHGRSRIASTLLK-LGADTDALDEVGETPLMKAAELGHQPVVETLLKAGSNVHVFSYGRGRAALHFAAGEGHYGVVLALLDHRADKNAQDVSGFTALVLATAQGSLPTVKILLKAGADLTIRS 504
R A L+ LLR G D NV +P NG LH A +H + LL D +A + GE PLM AA G + L++ G+ V + ALH+A GV LLD AD NA+ +G T L++A GSL + +LLK GAD T+R+
Sbjct: 37 RSAVLEALLR-GMDPNVLAP-NGQRPLHWALMHESGQALDGLLADPRTDVEAENASGERPLMLAALRGRLAWAQLLVRHGAAVEPKRGQKTWGALHYACSGPDQGVSTWLLDQGADINARSENGSTPLMMAFGYGSLDSADVLLKRGADTTLRN 188
BLAST of mRNA_S-firma_F_contig1061.836.1 vs. uniprot
Match: UPI0011EA480A (B-cell lymphoma 3 protein n=1 Tax=Archocentrus centrarchus TaxID=63155 RepID=UPI0011EA480A) HSP 1 Score: 79.3 bits (194), Expect = 3.590e-14 Identity = 54/167 (32.34%), Postives = 89/167 (53.29%), Query Frame = 1
Query: 13 EPPLLQAVEAGRVAELKYLLRAGADVNVRSPFNGSTALHLAAIHGRSRIASTLLKLGADTDALD---EVGETPLMKAAELGHQPVVETLLKAGSNVHVFSYGRGRAALHFAAGEGHYGVVLALLDHRADKNAQDVSGFTALVLATAQGSLPTVKILLKAGADLTIRS 504
+ PL AV + ++ LL+AGAD NG TALHL + + S +L + + L+ G +PL A GH+ + LL AG++++ G++ L A + +V L+++R D N+Q SG TAL A +G + TV++LLK+GAD ++++
Sbjct: 228 QTPLHLAVITKQADMVEALLKAGADPAALDR-NGQTALHLCCEYDQHNCLSVVLSMPSSATCLEIRNYEGLSPLHLAVLQGHKHLARMLLDAGADINAMDIKSGQSPLMHAVESNNIDMVHFLIENRCDVNSQSYSGNTALHSACGRGQVETVRLLLKSGADSSLKN 393 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1061.836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1061.836.1 >prot_S-firma_F_contig1061.836.1 ID=prot_S-firma_F_contig1061.836.1|Name=mRNA_S-firma_F_contig1061.836.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=168bp MYEPEPPLLQAVEAGRVAELKYLLRAGADVNVRSPFNGSTALHLAAIHGRback to top mRNA from alignment at S-firma_F_contig1061:8879..9382- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1061.836.1 ID=mRNA_S-firma_F_contig1061.836.1|Name=mRNA_S-firma_F_contig1061.836.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=504bp|location=Sequence derived from alignment at S-firma_F_contig1061:8879..9382- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1061:8879..9382- >mRNA_S-firma_F_contig1061.836.1 ID=mRNA_S-firma_F_contig1061.836.1|Name=mRNA_S-firma_F_contig1061.836.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=1008bp|location=Sequence derived from alignment at S-firma_F_contig1061:8879..9382- (Sphaerotrichia firma ET2_F female)back to top |