prot_S-firma_F_contig10005.68.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10005.68.1
Unique Nameprot_S-firma_F_contig10005.68.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length62
Homology
BLAST of mRNA_S-firma_F_contig10005.68.1 vs. uniprot
Match: D7FWJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ7_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 1.960e-23
Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MADDEISYQSATRDVLLSAAKVIGSECVDVNLAFTKCKAQNSDPEACLKLGSAVLECNNRV 61
            M ++++ + SATRDVL+S AK++GS CVD NLAFTKCKA+NSDPEAC+KLG AVLEC ++ 
Sbjct:    1 MGEEDMPFPSATRDVLISTAKLLGSSCVDENLAFTKCKAENSDPEACMKLGVAVLECTSKA 61          
BLAST of mRNA_S-firma_F_contig10005.68.1 vs. uniprot
Match: K3WSU2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU2_GLOUD)

HSP 1 Score: 55.1 bits (131), Expect = 3.300e-8
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 0
Query:    1 MADDEISYQSATRDVLLS-AAKVIGSECVDVNLAFTKCKAQNSDPEACLKLGSAVLEC 57
            MAD   +   +T +  L+ AA+V+G EC D NLAF +CK +N+DP ACL  G  V  C
Sbjct:    1 MADAATNTLPSTDNTSLTCAARVLGFECADANLAFLRCKQENADPRACLAQGEKVTAC 58          
BLAST of mRNA_S-firma_F_contig10005.68.1 vs. uniprot
Match: A0A5D6YII0_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YII0_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 8.400e-6
Identity = 22/42 (52.38%), Postives = 27/42 (64.29%), Query Frame = 0
Query:   16 LLSAAKVIGSECVDVNLAFTKCKAQNSDPEACLKLGSAVLEC 57
            L  AA+V+G EC D NLAF +CK  ++DP ACL  G  V  C
Sbjct:  102 LTCAARVLGYECADPNLAFLRCKQADADPRACLAQGEKVTAC 143          
BLAST of mRNA_S-firma_F_contig10005.68.1 vs. uniprot
Match: A0A6L2NXU0_TANCI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2NXU0_TANCI)

HSP 1 Score: 47.4 bits (111), Expect = 2.860e-5
Identity = 22/46 (47.83%), Postives = 29/46 (63.04%), Query Frame = 0
Query:   12 TRDVLLSAAKVIGSECVDVNLAFTKCKAQNSDPEACLKLGSAVLEC 57
            T  VL+SA+K I + C   N+AF KCK  +S+PE CL+ G  V  C
Sbjct:   11 TSAVLMSASKHIATRCRGENVAFLKCKKDDSNPEKCLEKGRQVTRC 56          
BLAST of mRNA_S-firma_F_contig10005.68.1 vs. uniprot
Match: S8DNJ9_FOMPI (NADH-ubiquinone oxidoreductase n=5 Tax=Fomitopsidaceae TaxID=1769247 RepID=S8DNJ9_FOMPI)

HSP 1 Score: 47.4 bits (111), Expect = 6.840e-5
Identity = 24/53 (45.28%), Postives = 29/53 (54.72%), Query Frame = 0
Query:    5 EISYQSATRDVLLSAAKVIGSECVDVNLAFTKCKAQNSDPEACLKLGSAVLEC 57
            ++    AT   L SAA  +G+ C D N  F  CKA+N DPE CLK G  V  C
Sbjct:   27 KVQELGATSAPLKSAAFFLGAYCKDYNEDFMLCKAENRDPEHCLKEGRRVTRC 79          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10005.68.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FWJ7_ECTSI1.960e-2365.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3WSU2_GLOUD3.300e-846.55Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6YII0_9STRA8.400e-652.38Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6L2NXU0_TANCI2.860e-547.83NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
S8DNJ9_FOMPI6.840e-545.28NADH-ubiquinone oxidoreductase n=5 Tax=Fomitopsida... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10005contigS-firma_F_contig10005:3696..4218 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10005.68.1mRNA_S-firma_F_contig10005.68.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10005 3696..4218 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10005.68.1 ID=prot_S-firma_F_contig10005.68.1|Name=mRNA_S-firma_F_contig10005.68.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=62bp
MADDEISYQSATRDVLLSAAKVIGSECVDVNLAFTKCKAQNSDPEACLKL
GSAVLECNNRV*
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