prot_S-firma_F_contig10435.619.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10435.619.1
Unique Nameprot_S-firma_F_contig10435.619.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length125
Homology
[Close]
BLAST of mRNA_S-firma_F_contig10435.619.1 vs. uniprot
Match: A0A6H5KY72_9PHAE (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY72_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 8.370e-9
Identity = 40/74 (54.05%), Postives = 41/74 (55.41%), Query Frame = 0 
Query:   54 RERAASERIRLDGGG----TTPTRRPRHPVDAWGTPPASVSHRRGQGSTSSAMTGSVSSXXXXXXXXXXVATGG 123
            RER   E +  DG G     TPTRRPR PVDAWGTPPAS SHRRG  S  S  TGSVS           V T G
Sbjct:  894 RERQCEESVAFDGSGKDEANTPTRRPRPPVDAWGTPPASTSHRRG--SPISTATGSVSGGDGGASNSESVPTSG 965
[Close]
BLAST of mRNA_S-firma_F_contig10435.619.1 vs. uniprot
Match: D8LIZ3_ECTSI (Kinesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIZ3_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.620e-6
Identity = 35/58 (60.34%), Postives = 36/58 (62.07%), Query Frame = 0 
Query:   54 RERAASERIRLDGGG----TTPTRRPRHPVDAWGTPPASVSHRRGQGSTSSAMTGSVS 107
            RER + E    DG G     TPTRRPR PVDAWGTPP S S RRG    SS  TGSVS
Sbjct:  831 RERQSEEPAAFDGSGKDGANTPTRRPRPPVDAWGTPPDSTSRRRGP--LSSVATGSVS 886
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10435.619.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KY72_9PHAE8.370e-954.05Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
D8LIZ3_ECTSI1.620e-660.34Kinesin-like protein n=1 Tax=Ectocarpus siliculosu... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10435contigS-firma_F_contig10435:3546..3920 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10435.619.1mRNA_S-firma_F_contig10435.619.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10435 3546..3921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10435.619.1 ID=prot_S-firma_F_contig10435.619.1|Name=mRNA_S-firma_F_contig10435.619.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=125bp
TKPKPRHLDHNNTHPRAAAAAAHHHPPPNNNSVGSLDNQQDAVATPTSST
ARERERAASERIRLDGGGTTPTRRPRHPVDAWGTPPASVSHRRGQGSTSS
AMTGSVSSGGGGGGGGGSVATGGGR
back to top