prot_S-firma_F_contig1000.59.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1000.59.1
Unique Nameprot_S-firma_F_contig1000.59.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length684
Homology
BLAST of mRNA_S-firma_F_contig1000.59.1 vs. uniprot
Match: D7G2T2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T2_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 7.840e-70
Identity = 242/570 (42.46%), Postives = 292/570 (51.23%), Query Frame = 0
Query:    5 GGDNTAAAKAAAATAMTGRLERVLGRIMRRIEGARQLRVWVEREVERARGAAAEGLDDLRGRWDAQLTRLQGAERKLLRLQEQAKYGGRRAALDAREECYAKIEQVEKEKWGLRDCLVAEKRQSELLEAKASRLQEQ-----LAALSDQVERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRE---EREKERALRQQEEGRVSREQEAAVLRVSELLEDERVARDEETSRLTXXXXXXXXXXXXXXXXXXXXXXXXRETQGLLGEMSPG-SDRAARGPKGSGSRTFRGAVRERLPPATGG--ASALELQASRLERLVADTAALVKHTGRFYDRYSETHKAANS--SGEAGNPRTVPGNTPGRKGSGGD-GFVPNCGAPAGSCCKPTPSSSSKAAFFSHGVVRQSLGAGGAGSPSYRGSGSFAPTATATTSPGSQPWGGGGDEERSGNFLGRAL--RRGVAGAAAAGEGGCCAALRELDRRCYSLLESNAQLCLKLQGLGLEYAGLTRVLLAAGG 558
            GG    A  A  A AM  RLERVL RIMRR++GAR LR WV  +VE A G A EGL ++RGRW+A+L RLQ AERKL+RLQEQAKYGGRRAALDAREECYAKIE+VE+EKW LRD LV+E+R+ E+L A   RL++      ++A SD                              XXXXXXXXX                                                  +E    R+KER L +Q +        A   R++ LLE+ER AR EE +                           RETQGLLGEMSP   D A  GP       FRG+V ER   + G   +SAL LQAS+LER+VA+ + L++ TG FYDRYSETHK A    +G+      +PG+  G  G+    G   N GA  G+          +AA  +   + +S GA G  SP     G F+P        G QPW G    E S NFL R L  R  V       E G   ALRELDR CYSLLESNAQLCL++QGLGLEYAGLTR L+A+GG
Sbjct:  161 GGGAVPAGSAVDAAAMVARLERVLSRIMRRVDGARGLRAWVTGKVENAGGDAMEGLREIRGRWEAELGRLQAAERKLVRLQEQAKYGGRRAALDAREECYAKIERVEQEKWALRDSLVSEEREVEVLRAHLKRLKDATDKAAVSAESDYRAACHELEAERGHRQRLQDKTELLEGKASXXXXXXXXXSEQIDRYKTEALQQQQDKDRLLRSQETLQSQLKEEVQSVEKARREFLSNSQEISRGRDKERELEEQRDSAA-----AEAARLTCLLEEERRARREENAM------------------GEAVLREVRETQGLLGEMSPHRGDPAGTGP-------FRGSVLERGSSSDGDDPSSALGLQASKLERIVAEASDLIRRTGHFYDRYSETHKNAGGEKNGDDEASEKLPGSNSGLPGNDATAGRYQNRGAATGAGQSDRYEGRHRAAS-AEAAIERSFGANGR-SPGDPPPGVFSPQQPPAGG-GHQPWRG---REDSWNFLDRTLEHRHWV-------ETG--PALRELDRACYSLLESNAQLCLRIQGLGLEYAGLTRELMASGG 685          
BLAST of mRNA_S-firma_F_contig1000.59.1 vs. uniprot
Match: A0A6H5K601_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K601_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.730e-22
Identity = 93/207 (44.93%), Postives = 114/207 (55.07%), Query Frame = 0
Query:  358 QASRLERLVADTAALVKHTGRFYDRYSETHKAA--NSSGEAGNPRTVPGNTPGRKGSGGD-GFVPNCGAPAGSCCKPTPSSSSKAAFFSHGVVRQSLGAGGAGSPSYRGSGSFAPTATATTSPGSQPWGGGGDEERSGNFLGRAL--RRGVAGAAAAGEGGCCAALRELDRRCYSLLESNAQLCLKLQGLGLEYAGLTRVLLAAGGE 559
            QAS+LER+VA+ + L++ TG FYDRYSETHK A  + +G+      +PG      G+    G   N G    +          +AA     + R S GA G+ SP     G F+P   +    G QPW G    E SGN L R L  R GV         G   ALRELDR CYSLLESNAQLCL+LQGLGLEYAGL+R LLA+G +
Sbjct:    7 QASKLERIVAEASDLIRQTGHFYDRYSETHKNAGGDKNGDDKASEKIPGGNSSLLGNDATAGRHQNRGVATAAGQSDRCEGRHRAASAGAAMER-SFGANGS-SPGNPPPGVFSPQQLSAG--GHQPWRG---REDSGNCLDRTLEHRHGV---------GAGPALRELDRACYSLLESNAQLCLRLQGLGLEYAGLSRQLLASGAK 197          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1000.59.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2T2_ECTSI7.840e-7042.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K601_9PHAE2.730e-2244.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..113
NoneNo IPR availableCOILSCoilCoilcoord: 276..296
NoneNo IPR availableCOILSCoilCoilcoord: 121..253
NoneNo IPR availablePANTHERPTHR43939FAMILY NOT NAMEDcoord: 50..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1000contigS-firma_F_contig1000:12917..23531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1000.59.1mRNA_S-firma_F_contig1000.59.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1000 12917..23531 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1000.59.1 ID=prot_S-firma_F_contig1000.59.1|Name=mRNA_S-firma_F_contig1000.59.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=684bp
GGADGGDNTAAAKAAAATAMTGRLERVLGRIMRRIEGARQLRVWVEREVE
RARGAAAEGLDDLRGRWDAQLTRLQGAERKLLRLQEQAKYGGRRAALDAR
EECYAKIEQVEKEKWGLRDCLVAEKRQSELLEAKASRLQEQLAALSDQVE
RLKAEQSERLQEKERLLARQETLQAQLDQHVSRGREKEKEMEEQRSAFEE
QVRRAEEEAARAAELTKALDAEAARAAALTKALDAEREEREKERALRQQE
EGRVSREQEAAVLRVSELLEDERVARDEETSRLTALLEEERRARREESAL
GEAVLREVRETQGLLGEMSPGSDRAARGPKGSGSRTFRGAVRERLPPATG
GASALELQASRLERLVADTAALVKHTGRFYDRYSETHKAANSSGEAGNPR
TVPGNTPGRKGSGGDGFVPNCGAPAGSCCKPTPSSSSKAAFFSHGVVRQS
LGAGGAGSPSYRGSGSFAPTATATTSPGSQPWGGGGDEERSGNFLGRALR
RGVAGAAAAGEGGCCAALRELDRRCYSLLESNAQLCLKLQGLGLEYAGLT
RVLLAAGGEPDHPHLHEGGREPLDVADLDGDDSGVFSGEPHHRHHHHRRQ
SRRHHHHHPRSRGDPHHPPHHHHQHRSRSRSSNNYTRRGLPASEEEEEET
RFDSGDGSEGSPDPPPRRRAAAAGRPCSPASPAG
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