prot_S-firma_F_contig1000.57.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1000.57.1
Unique Nameprot_S-firma_F_contig1000.57.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length165
Homology
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BLAST of mRNA_S-firma_F_contig1000.57.1 vs. uniprot
Match: A0A6H5KBF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF2_9PHAE)

HSP 1 Score: 54.3 bits (129), Expect = 1.740e-5
Identity = 24/33 (72.73%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:    1 VSRARVALEGLEEGRRHAGRWCRWVSSALAAAD 33
            VSRAR  L+ L+EGR HAGRWCRW SSAL AA+
Sbjct:  696 VSRAREVLDALDEGREHAGRWCRWASSALVAAE 728
[Close]
BLAST of mRNA_S-firma_F_contig1000.57.1 vs. uniprot
Match: D7G2T0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T0_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 4.000e-5
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0 
Query:    1 VSRARVALEGLEEGRRHAGRWCRWVSSALAAAD 33
            V+RAR  L+ L+EGR HAGRWCRW SSAL AA+
Sbjct:  424 VTRAREVLDALDEGREHAGRWCRWASSALVAAE 456
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1000.57.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KBF2_9PHAE1.740e-572.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2T0_ECTSI4.000e-569.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1000contigS-firma_F_contig1000:1282..2311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1000.57.1mRNA_S-firma_F_contig1000.57.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1000 1282..2311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1000.57.1 ID=prot_S-firma_F_contig1000.57.1|Name=mRNA_S-firma_F_contig1000.57.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=165bp
VSRARVALEGLEEGRRHAGRWCRWVSSALAAADAEGGGGAAGSGGQTAAT
TGPFPAGTPGRGDLVASSSPPSGVTETQGGDDTAGGPVRSSDRVAPPPSS
DSDTGLQQKQQQQQQLLERAGALQEELERRVLATHGTPGETSAGGVPALL
AAVEAGLRLQEEKGG
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