prot_S-firma_F_contig1037.526.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1037.526.1
Unique Nameprot_S-firma_F_contig1037.526.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length385
Homology
BLAST of mRNA_S-firma_F_contig1037.526.1 vs. uniprot
Match: D8LRG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRG2_ECTSI)

HSP 1 Score: 676 bits (1745), Expect = 1.620e-234
Identity = 332/386 (86.01%), Postives = 355/386 (91.97%), Query Frame = 0
Query:    1 MQSFATRLLAPGR--NSGWFILENQMREKVVTNRISPSCRYYNRPGVDSYKPLDSEFPRCLKGFKWDMEKLVAKLKVKLIEHAKGIAGYQFLAACKLFRDEVAPGQRKGGRISAADFRRVVEYKFGMKLDPDEVLNLFHFFVPGTGDSVEIAAMVRVLEPDDYTDSWFSTRESTDMFGFTKPGPEKVVLQAKKMNVGGSWNLKLIEDKIREKIHERVGGTNLFEVQAAYTLFQDGRNTGLTKKGFQAQMHDKFAVVLSQKDVDDVFRKYDPKGTGKLDVHSFVKRLVSPAADNINWFRDKDTYEFHVLNRAPMKKDPMKAECWKATNWTFRQFETTLRDKLLAKSNQDGGRFAFKSAVNLIRSANPDHLDSSNMDREALKFVVFRR 384
            MQSFATRLLAP R  ++GWF L+NQMREKVVTNRISPS RY+NRPGV+SYKPLD+ FP+CLKGFKWDM KLVAKLKVKL E AKGIAGYQFLAACKLFR EV+   RKG RISA DFR VVEYKFGMKLD DEVL+LFH+ VPGTGDS++I++MVRVLEPDDYTDSWF+TRESTDMFGFTKPGPEKVVLQAKKMNVGGSWNLKLIE KIREKI+ERVGGT+LFEVQAAYTLFQDGRNTGLTKKGFQAQMHDKFAVVLS KDVDDVFRKYDPKGTGKLDVHSFV RL+SP A+   WF +KDTYEFHVLNRAPMKKDPMKAE W+ T WTFRQFETTLRDKLLAKSNQDGGRFAFKSAVNL+RSANPDHLDSS MDREA KFV+FRR
Sbjct:    1 MQSFATRLLAPDRAGSNGWFFLDNQMREKVVTNRISPSSRYHNRPGVESYKPLDNVFPQCLKGFKWDMGKLVAKLKVKLREQAKGIAGYQFLAACKLFRSEVS-SNRKGDRISAEDFRGVVEYKFGMKLDHDEVLSLFHYLVPGTGDSIDISSMVRVLEPDDYTDSWFNTRESTDMFGFTKPGPEKVVLQAKKMNVGGSWNLKLIEGKIREKIYERVGGTSLFEVQAAYTLFQDGRNTGLTKKGFQAQMHDKFAVVLSSKDVDDVFRKYDPKGTGKLDVHSFVVRLISPTAEPEPWFGNKDTYEFHVLNRAPMKKDPMKAESWQRTKWTFRQFETTLRDKLLAKSNQDGGRFAFKSAVNLLRSANPDHLDSSYMDREAFKFVIFRR 385          
BLAST of mRNA_S-firma_F_contig1037.526.1 vs. uniprot
Match: A0A835YQE8_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQE8_9STRA)

HSP 1 Score: 379 bits (974), Expect = 4.950e-119
Identity = 203/406 (50.00%), Postives = 266/406 (65.52%), Query Frame = 0
Query:    1 MQSFATRLLAPGRNSGWFILENQMRE---KVVTNRISPSCRYYNRPGVDSYKPL--DSEFPRCLKGFKWDMEKLVAKLKVKLIEHAKGIAGYQFLAACKLFRDEVAPGQRKGGRISAADFRRVVEYKFGMKLDPD----------------EVLNLFHFFVPGTGDSVEIAAMVRVLEPDDYTD-SWFSTRESTDMFGFTKPGPEKVVLQAKKMNVGGSWNLKLIEDKIREKIHERVGGT-NLFEVQAAYTLFQDGRNTGLTKKGFQAQMHDKFAVVLSQKDVDDVFRKYDPKGTGKLDVHSFVKRLVSPAADNINWFRDKDTYEFHVLNRAPMKKDPMKAECWKATNWTFRQFETTLRDKLLAKSNQDGGRFAFKSAVNLIRSANPDHLDSSNMDREALKFVVFR 383
            ++S   RLL P    GWF+L  Q+R    K    RIS S R+ + PGV +  P+  + EFP  L+GFKWD+ KLV KLK K+ EHA+G AGY FLAACK+FR E+   +RKG  I+A +FR VV  KF +  D                  E ++LF    PG G S+ I  +VR L P DY + SWFSTR+STDM G+    P+KVVLQA++MN   +W + ++EDKIREK+HER GGT NL++VQA Y LF DGRN G+T++ F+A +HDKFA++L+  +VD +FR++DP+ TG+LD++ FV RLV   A    WF+ +++Y+F    RAP K+D M A  WK T W+    E  L  K+ AKSNQDGGRFAFKSAVNL+RSANPDHLD ++  R A K VVFR
Sbjct:  145 VRSMVRRLLQPAPEDGWFMLSAQLRADACKEAETRISESARFKHTPGVVAQDPVPTNEEFPASLRGFKWDVNKLVQKLKCKINEHAQGHAGYLFLAACKIFRHELP--ERKGDMITAREFRDVVRAKFSLVCDEQGVTAAHXXXXXXXXXXECIDLFEMLEPGCGGSMPITELVRRLVPRDYIERSWFSTRDSTDMPGYEHGKPDKVVLQAQEMNKH-NWTVDILEDKIREKLHERSGGTGNLYQVQATYRLFLDGRNNGVTRERFKAHLHDKFAILLTDDEVDALFRRHDPENTGQLDLYKFVMRLVGVQAPPEPWFQGRESYDFRCGRRAPHKEDLMGAPEWKRTKWSLHHLEQELIKKMWAKSNQDGGRFAFKSAVNLLRSANPDHLDRTSFTRAAAKMVVFR 547          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1037.526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRG2_ECTSI1.620e-23486.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YQE8_9STRA4.950e-11950.00EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 255..290
score: 8.46
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 106..284

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1037contigS-firma_F_contig1037:7228..11755 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1037.526.1mRNA_S-firma_F_contig1037.526.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1037 7228..11755 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1037.526.1 ID=prot_S-firma_F_contig1037.526.1|Name=mRNA_S-firma_F_contig1037.526.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=385bp
MQSFATRLLAPGRNSGWFILENQMREKVVTNRISPSCRYYNRPGVDSYKP
LDSEFPRCLKGFKWDMEKLVAKLKVKLIEHAKGIAGYQFLAACKLFRDEV
APGQRKGGRISAADFRRVVEYKFGMKLDPDEVLNLFHFFVPGTGDSVEIA
AMVRVLEPDDYTDSWFSTRESTDMFGFTKPGPEKVVLQAKKMNVGGSWNL
KLIEDKIREKIHERVGGTNLFEVQAAYTLFQDGRNTGLTKKGFQAQMHDK
FAVVLSQKDVDDVFRKYDPKGTGKLDVHSFVKRLVSPAADNINWFRDKDT
YEFHVLNRAPMKKDPMKAECWKATNWTFRQFETTLRDKLLAKSNQDGGRF
AFKSAVNLIRSANPDHLDSSNMDREALKFVVFRRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR002048EF_hand_dom