prot_S-firma_M_contig9128.20077.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9128.20077.1
Unique Nameprot_S-firma_M_contig9128.20077.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length253
Homology
BLAST of mRNA_S-firma_M_contig9128.20077.1 vs. uniprot
Match: D8LB29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB29_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 4.340e-90
Identity = 157/262 (59.92%), Postives = 176/262 (67.18%), Query Frame = 0
Query:    1 SQDGGLKIWDVRGSKEAAHYNSHYGAVRDIQFSPLQEFHFAAVFNNGKMQIWDYKFLQPKMKIASHNKSAFSVEWHHTVPGRLATTSDKSVKIWDL-----QRQPERQTATTM-----AMEQTLQPTIELASPGVVSRAKWRPGHHDQIATAQAP-LMGEKDFAMMVHDVNEPEIAHFALYGGDDKKNGFCWLDTPLGFSESSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREEDARAEWRG-MGVWQHLVSCSD 250
            SQDG LKIWD+R SK  A ++S YGAVRD+QFSPLQEFHFAAVF+NGK+QIWDYKF QPKMKIASH KSA SVEWH T+P RLATTSDK V+IWDL      RQ ++Q           MEQTL  TI L SPG+VSRAKWRPGH  QIATAQ P  +G+ D+A+MVHD+ +P + HFALYGGDDKKNGFCWLDTPL   ES G                                    EDA AEW G MGVWQH+VSCSD
Sbjct:  163 SQDGYLKIWDLRHSKAVATFDSRYGAVRDVQFSPLQEFHFAAVFDNGKLQIWDYKFKQPKMKIASHTKSALSVEWHRTLPWRLATTSDKVVEIWDLAPPAVDRQQQKQXXXXXQLQGPVMEQTLLSTITLRSPGMVSRAKWRPGHPTQIATAQVPPRLGDTDYAIMVHDITDPAVPHFALYGGDDKKNGFCWLDTPLNL-ESQGAPPSSFSSGVSGVAKARRVGAGGS-----------NEDANAEWSGGMGVWQHVVSCSD 412          
BLAST of mRNA_S-firma_M_contig9128.20077.1 vs. uniprot
Match: A0A6H5KXV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXV7_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 1.120e-25
Identity = 46/62 (74.19%), Postives = 53/62 (85.48%), Query Frame = 0
Query:  126 VSRAKWRPGHHDQIATAQAP-LMGEKDFAMMVHDVNEPEIAHFALYGGDDKKNGFCWLDTPL 186
            VSRAKWRPGH  QIATAQ P  +G+ D+A+MVHD+ +P + HFALYGGDDKKNGFCWLDTPL
Sbjct:   10 VSRAKWRPGHPTQIATAQVPPRLGDTDYAIMVHDITDPAVPHFALYGGDDKKNGFCWLDTPL 71          
BLAST of mRNA_S-firma_M_contig9128.20077.1 vs. uniprot
Match: A0A8J5A0K1_9CHEL (GATOR complex protein WDR24 n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5A0K1_9CHEL)

HSP 1 Score: 102 bits (255), Expect = 3.240e-21
Identity = 61/187 (32.62%), Postives = 93/187 (49.73%), Query Frame = 0
Query:    1 SQDGGLKIWDVRGSKEAAHYNSHYGAVRDIQFSPLQEFHFAAVFNNGKMQIWDYKFLQP-KMKIASHNKSAFSVEWHHTVPGRLATTS-DKSVKIWDLQRQPERQTATTMAMEQTLQPTIELASPGVVSRAKWRPGHHDQIATAQAPLMGEKDFAMMVHDVNEPEIAHFALYGGDDKKNGFCWLDTP 185
            SQDG +KI+D+R  +  + + S   +VRD+QFSP   F FAAV  NG +Q+WD++     + +  +H+   F+ +WH      LAT   DK++K+WD+  +P               P   + +   VSR KWRP    QIA++   +    DF++ V DV  P I + +     D   G  W   P
Sbjct:  125 SQDGTMKIFDLRKKEATSTFTSMSESVRDVQFSPFAYFQFAAVQENGNVQLWDWRRTDRCERQFTAHSGPVFACDWHPEEKNCLATAGRDKTIKVWDVVNKPV--------------PDFVIQTIASVSRIKWRPSRKLQIASSSLVV----DFSVNVWDVQRPYIPYASFTEHKDVTTGILWRKDP 293          
BLAST of mRNA_S-firma_M_contig9128.20077.1 vs. uniprot
Match: UPI00200DCB5F (GATOR complex protein WDR24 n=1 Tax=Leguminivora glycinivorella TaxID=1035111 RepID=UPI00200DCB5F)

HSP 1 Score: 98.6 bits (244), Expect = 9.180e-20
Identity = 64/194 (32.99%), Postives = 96/194 (49.48%), Query Frame = 0
Query:    1 SQDGGLKIWDVRGSKEAAHYNSHYGAVRDIQFSPLQEFHFAAVFNNGKMQIWDYKFLQP-KMKIASHNKSAFSVEWHHTVPGRLATTSDKSVKIWDLQRQPERQTATTMAMEQTLQPTI-ELASPGVVSRAKWRPGHHDQIATAQAPLMGEKDFAMMVHDVNEPEIAHFALYGGDDKKNGFCWLDTPLGFSESS 192
            SQDG +K +D+R  + A  + S+  ++RD+QFSP Q   FAAV  NG +Q+WD +  +   ++  +H+   F+ +WH TVP     + DK++K+WD+  +P            TL+ TI  +AS G V   KWRP     +A+    L    D A+ V DV  P +         D      WL T   F  +S
Sbjct:  126 SQDGTMKCFDLRMKEVARTFISNTESIRDVQFSPHQAHTFAAVSENGSVQLWDVRRSERCVVQFTAHSGPVFACDWHPTVPALATASRDKTIKVWDIHAKP------------TLEHTIYTIASVGHV---KWRPHRKHHVASCALVL----DCAVHVWDVRRPHVPLATFAEHRDVATAVAWLPTFDAFLSTS 300          
BLAST of mRNA_S-firma_M_contig9128.20077.1 vs. uniprot
Match: UPI0003F06801 (WD repeat-containing protein 24 n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F06801)

HSP 1 Score: 98.6 bits (244), Expect = 9.290e-20
Identity = 68/197 (34.52%), Postives = 93/197 (47.21%), Query Frame = 0
Query:    1 SQDGGLKIWDVRGSKEAAHYNSHYGAVRDIQFSPLQEFHFAAVFNNGKMQIWDY----KFLQPKMKIASHNKSAFSVEWHHTVPGRLATTS-DKSVKIWDLQRQPERQTATTMAMEQTLQPTIELASPGVVSRAKWRPGHHDQIATAQAPLMGEKDFAMMVHDVNEPEIAHFALYGGDDKKNGFCWLDTPLGFSESS 192
            SQDG +KI+D+R  +    +N    +VRD+QF   Q F FAA F NG +Q+WD     KF Q   +  +HN  AFS++ H      LAT   DKS+KIWDLQ +P             L  T++  +P  V+R KWRP     I++    +    D  + V D+  P I         D   G  W   P  F  +S
Sbjct:  151 SQDGLMKIFDLRKKEATITFNGQSESVRDVQFMQFQYFSFAAAFENGNIQLWDIRRADKFYQ---QFTAHNGPAFSLDGHPEERQWLATAGRDKSIKIWDLQFKP------------VLMHTVQTIAP--VTRVKWRPQRKFHISSCSLVI----DHTINVWDIRRPYIPFATFEEHKDVATGVVWRHDPHIFLSAS 326          
BLAST of mRNA_S-firma_M_contig9128.20077.1 vs. uniprot
Match: S4P4K8_9NEOP (GATOR complex protein WDR24 (Fragment) n=2 Tax=Pararge aegeria TaxID=116150 RepID=S4P4K8_9NEOP)

HSP 1 Score: 95.5 bits (236), Expect = 1.390e-19
Identity = 61/193 (31.61%), Postives = 95/193 (49.22%), Query Frame = 0
Query:    1 SQDGGLKIWDVRGSKEAAHYNSHYGAVRDIQFSPLQEFHFAAVFNNGKMQIWDYKFLQPKM-KIASHNKSAFSVEWHHTVPGRLATTSDKSVKIWDLQRQPERQTATTMAMEQTLQPTIELASPGVVSRAKWRPGHHDQIATAQAPLMGEKDFAMMVHDVNEPEIAHFALYGGDDKKNGFCWLDTPLGFSESS 192
            SQDG +K +D+R  + A  + S+  ++RD+QFSP Q   FAAV  NG +Q+WD +  +  + +  +H+   F+ +WH  VP     + DK++K+WD+  +P         +E T+     +AS G V   KWRP    Q+A+    L    D A+ V DV  P +         D      W  +P  F  +S
Sbjct:  126 SQDGMMKCFDLRMKEVARTFISNTESIRDVQFSPHQAHVFAAVSENGTVQLWDARRHERALHQFTAHSGPVFACDWHPEVPWLATASRDKTIKVWDIHARPN--------LEHTI---YTIASVGHV---KWRPQKRFQVASCALVL----DCAVHVWDVRRPHVPLATFAEHRDVTTAIAWQASPHAFLSTS 300          
BLAST of mRNA_S-firma_M_contig9128.20077.1 vs. uniprot
Match: A0A7R9H6C9_TIMCR (GATOR complex protein WDR24 (Fragment) n=1 Tax=Timema cristinae TaxID=61476 RepID=A0A7R9H6C9_TIMCR)

HSP 1 Score: 97.4 bits (241), Expect = 1.980e-19
Identity = 60/197 (30.46%), Postives = 94/197 (47.72%), Query Frame = 0
Query:    1 SQDGGLKIWDVRGSKEAAHYNSHYGAVRDIQFSPLQEFHFAAVFNNGKMQIWDYKFLQPK---MKIASHNKSAFSVEWHHTVPGRLATTSDKSVKIWDLQRQPERQTATTMAMEQTLQPTIELASPGVVSRA--KWRPGHHDQIATAQAPLMGEKDFAMMVHDVNEPEIAHFALYGGDDKKNGFCWLDTPLGFSESS 192
            SQDG ++++D+R  +    Y+S+  +VRD+QFSP Q + F AV  NG +Q+WD +  +P     +  +H+   F+ +WH   P     + DK++K+WDL                +++PT+E   P + S    KWRP     IA+    +    D  + V DV  P I + A     D   G  W   P  F  +S
Sbjct:  102 SQDGTMRLFDLRTKEVTRTYHSNTESVRDVQFSPHQSYVFVAVSENGNVQLWDMR--RPDRWTQQFTAHSGPVFTCDWHPAEPWLATASRDKTIKVWDL----------------SVKPTLEYVVPTIASVGFIKWRPQRKFHIASCALVV----DCGVNVWDVRRPYIPYAAFTEHKDVATGVAWRGDPHVFLSTS 276          
BLAST of mRNA_S-firma_M_contig9128.20077.1 vs. uniprot
Match: E9GN97_DAPPU (GATOR complex protein WDR24 n=5 Tax=Daphnia TaxID=6668 RepID=E9GN97_DAPPU)

HSP 1 Score: 97.4 bits (241), Expect = 2.230e-19
Identity = 65/188 (34.57%), Postives = 89/188 (47.34%), Query Frame = 0
Query:    1 SQDGGLKIWDVRGSKEAAHYNSHYGAVRDIQFSPLQEFHFAAVFNNGKMQIWDYKFLQPKMK-IASHNKSAFSVEWHHTVPGRLATTS-DKSVKIWDLQRQPERQ-TATTMAMEQTLQPTIELASPGVVSRAKWRPGHHDQIATAQAPLMGEKDFAMMVHDVNEPEIAHFALYGGDDKKNGFCWLDTP 185
            SQDG +K +D+R       + S+  +VRD+QF+P Q F FAAV  NG +Q+WD +      K   +H+   F+ +WH      LAT   DK+VK+WDL  +P  + T TTMA                V R KWRP     IA+    +    D  + V DV  P I H +     D   G  W  +P
Sbjct:  117 SQDGTMKYFDIRMKAAVMTFVSNAESVRDVQFNPYQCFSFAAVSENGTVQLWDLRRQDRSEKQFTAHSGPVFACDWHPENKSWLATAGRDKAVKVWDLGYRPVLEYTVTTMAS---------------VGRIKWRPQRMHHIASCALVI----DSVIHVWDVRRPYIPHASFNDHKDITTGIAWRGSP 285          
BLAST of mRNA_S-firma_M_contig9128.20077.1 vs. uniprot
Match: UPI0018D1F011 (GATOR complex protein WDR24 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D1F011)

HSP 1 Score: 97.4 bits (241), Expect = 2.300e-19
Identity = 63/194 (32.47%), Postives = 96/194 (49.48%), Query Frame = 0
Query:    1 SQDGGLKIWDVRGSKEAAHYNSHYGAVRDIQFSPLQEFHFAAVFNNGKMQIWDYKFLQ-PKMKIASHNKSAFSVEWHHTVPGRLATTSDKSVKIWDLQRQPERQTATTMAMEQTLQPTI-ELASPGVVSRAKWRPGHHDQIATAQAPLMGEKDFAMMVHDVNEPEIAHFALYGGDDKKNGFCWLDTPLGFSESS 192
            SQDG +K +D+R  + A  + S+  +VRD+QFSP Q   FAAV  NG +Q+WD +  +  + +  +H+   F+ +WH  +P     + DK++K+WD+  +P            TL+ TI  +AS G V   KWRP    QI++    L    D A+ V DV  P +         D      W  +P  F  +S
Sbjct:  126 SQDGTMKCFDLRMKEVARTFMSNTESVRDVQFSPHQAHQFAAVSENGSVQLWDVRRPERAQAQFTAHSGPVFACDWHPELPWLATASRDKTIKVWDISAKP------------TLEHTIYTIASVGHV---KWRPQRKYQISSCALVL----DCAVHVWDVRRPHVPLATFAEHRDVTTAIAWRASPHAFLSTS 300          
BLAST of mRNA_S-firma_M_contig9128.20077.1 vs. uniprot
Match: A0A7E5WFI7_TRINI (GATOR complex protein WDR24 n=1 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5WFI7_TRINI)

HSP 1 Score: 97.1 bits (240), Expect = 3.150e-19
Identity = 62/193 (32.12%), Postives = 95/193 (49.22%), Query Frame = 0
Query:    1 SQDGGLKIWDVRGSKEAAHYNSHYGAVRDIQFSPLQEFHFAAVFNNGKMQIWDYKFLQP-KMKIASHNKSAFSVEWHHTVPGRLATTSDKSVKIWDLQRQPERQTATTMAMEQTLQPTIELASPGVVSRAKWRPGHHDQIATAQAPLMGEKDFAMMVHDVNEPEIAHFALYGGDDKKNGFCWLDTPLGFSESS 192
            SQDG +K +D+R  + A  + S+  ++RD+QFSP Q   FAAV  NG +Q+WD +  +   M+  +H+   F+ +WH  +P     + DK++K+WD+  +P         +E T+     +AS G V   KWRP    Q+A+    L    D A+ V DV  P +         D      WL  P  F  +S
Sbjct:  126 SQDGMMKCFDLRMKEVARTFISNTESIRDVQFSPHQNNTFAAVSENGNVQLWDVRRHERCLMQFTAHSGPVFACDWHPEMPWLATASRDKTIKVWDIYGKPN--------LEHTI---YTIASVGHV---KWRPQKKHQVASCALVL----DCAVHVWDVRRPHVPLATFAEHRDVTTAIAWLAEPHSFLSTS 300          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9128.20077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB29_ECTSI4.340e-9059.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXV7_9PHAE1.120e-2574.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J5A0K1_9CHEL3.240e-2132.62GATOR complex protein WDR24 n=1 Tax=Nymphon striat... [more]
UPI00200DCB5F9.180e-2032.99GATOR complex protein WDR24 n=1 Tax=Leguminivora g... [more]
UPI0003F068019.290e-2034.52WD repeat-containing protein 24 n=1 Tax=Saccogloss... [more]
S4P4K8_9NEOP1.390e-1931.61GATOR complex protein WDR24 (Fragment) n=2 Tax=Par... [more]
A0A7R9H6C9_TIMCR1.980e-1930.46GATOR complex protein WDR24 (Fragment) n=1 Tax=Tim... [more]
E9GN97_DAPPU2.230e-1934.57GATOR complex protein WDR24 n=5 Tax=Daphnia TaxID=... [more]
UPI0018D1F0112.300e-1932.47GATOR complex protein WDR24 n=1 Tax=Plutella xylos... [more]
A0A7E5WFI7_TRINI3.150e-1932.12GATOR complex protein WDR24 n=1 Tax=Trichoplusia n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 13..53
e-value: 0.12
score: 21.4
coord: 56..95
e-value: 0.0027
score: 27.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 1..19
score: 8.838
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 63..104
score: 10.375
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..161
e-value: 1.6E-21
score: 78.8
IPR037590GATOR complex protein WDR24PANTHERPTHR46200FAMILY NOT NAMEDcoord: 1..183
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..104
score: 21.252
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 1..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9128contigS-firma_M_contig9128:165..3616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9128.20077.1mRNA_S-firma_M_contig9128.20077.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9128 165..3616 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9128.20077.1 ID=prot_S-firma_M_contig9128.20077.1|Name=mRNA_S-firma_M_contig9128.20077.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=253bp
SQDGGLKIWDVRGSKEAAHYNSHYGAVRDIQFSPLQEFHFAAVFNNGKMQ
IWDYKFLQPKMKIASHNKSAFSVEWHHTVPGRLATTSDKSVKIWDLQRQP
ERQTATTMAMEQTLQPTIELASPGVVSRAKWRPGHHDQIATAQAPLMGEK
DFAMMVHDVNEPEIAHFALYGGDDKKNGFCWLDTPLGFSESSGGAPPPPS
SGLAAAAASSSLSSSSTKSRRVGGGGSREEDARAEWRGMGVWQHLVSCSD
VS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR037590WDR24
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat