prot_S-firma_F_contig10507.713.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10507.713.1
Unique Nameprot_S-firma_F_contig10507.713.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length213
Homology
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BLAST of mRNA_S-firma_F_contig10507.713.1 vs. uniprot
Match: A0A6H5K463_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K463_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 1.260e-67
Identity = 131/180 (72.78%), Postives = 135/180 (75.00%), Query Frame = 0 
Query:    1 ISEAGARADSEARRAASTEPP----ATGEGGGATPTAPGREPRPPILQARFCGARVVYLQRFTMEQYCHILQRLIPSLKSAVRRPEDSLSGSPVAALAQKKGLRWVQGCTPKLPERRRMEKACARRPIIMEWVCKDSEFHLPECSDYREGRTDALVFEIPRLCLFRPPLRRCLPNTQETP 176
            ISEA  RA+ EAR  +S  P     A  EG       PGREPRPPIL+ARF  ARVVYLQRFTMEQ      R      S  RRPEDSL GSPVAALAQK GLRWVQGCTPKLPERRRMEKACARRPI+MEWVCKDSEFHLPECSDYREGRTDALVFEIPRLCLFRPPLRR LP     P
Sbjct: 1399 ISEAEVRAEREARGLSSAGPGVEDVAPREG------TPGREPRPPILRARFSAARVVYLQRFTMEQ-----AREEDDGGSVCRRPEDSLCGSPVAALAQKAGLRWVQGCTPKLPERRRMEKACARRPIVMEWVCKDSEFHLPECSDYREGRTDALVFEIPRLCLFRPPLRRRLPPAAGNP 1567
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BLAST of mRNA_S-firma_F_contig10507.713.1 vs. uniprot
Match: D8LME4_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME4_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 9.030e-11
Identity = 53/100 (53.00%), Postives = 60/100 (60.00%), Query Frame = 0 
Query:    1 ISEAGARADSEARRAASTEPPATGEGGGATPTAPGREPRPPILQARFCGARVVYLQRFTMEQYCHIL-------QRLIPSLKSAVRRPEDSLSG-SPVAA 92
            ISEA ARAD EAR  +S  P    EG  A    PGREPRPPIL+ARF  ARVVYLQRFTMEQ   +        +RL P+  +     ED+ SG SP AA
Sbjct:  490 ISEAEARADREARGISSAGPVV--EGVAAREGTPGREPRPPILRARFSAARVVYLQRFTMEQIPRLCLFRPPLRRRLQPAAGNPTTPSEDTRSGDSPSAA 587
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10507.713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K463_9PHAE1.260e-6772.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LME4_ECTSI9.030e-1153.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10507contigS-firma_F_contig10507:1465..4068 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10507.713.1mRNA_S-firma_F_contig10507.713.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10507 1464..4068 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10507.713.1 ID=prot_S-firma_F_contig10507.713.1|Name=mRNA_S-firma_F_contig10507.713.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=213bp
ISEAGARADSEARRAASTEPPATGEGGGATPTAPGREPRPPILQARFCGA
RVVYLQRFTMEQYCHILQRLIPSLKSAVRRPEDSLSGSPVAALAQKKGLR
WVQGCTPKLPERRRMEKACARRPIIMEWVCKDSEFHLPECSDYREGRTDA
LVFEIPRLCLFRPPLRRCLPNTQETPPAAAAAASTNGGDGGQPPHTPATA
AGGGAPARTTKSR
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