prot_S-firma_F_contig1030.446.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig1030.446.1
Unique Nameprot_S-firma_F_contig1030.446.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length402
Homology
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BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Match: D7FHZ6_ECTSI (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ6_ECTSI)

HSP 1 Score: 218 bits (554), Expect = 3.770e-63
Identity = 150/274 (54.74%), Postives = 165/274 (60.22%), Query Frame = 0 
Query:    1 MSLPSPAELSNIDIEIESAHTPVPLGGFSGGSPTGEVNPSPGRKHREHVRSGRCFVTLKRKGARDVVKQTHARSASSGSVGTAXXXXXXXXXXSGSSVGGNTPKLELNGSDFFSDGGGGIGIXXXXAHGNGSERGGFHRPEDDLEADGPLCTAINTPSPAPLRRASRTAS--GXXXXXGRRGXXXXXXXXXXXXXXXXGFRVSTGSSLASLEDAAQRIAVDPDTGHSYFVERSTVCDACPYCDDTCEVAWCNGCDERRAQLEDAHGPLMLSKAE 272
            MSLPSPAELS I  EIE AHTP+PLGGF GGSPTGEV  +PGR HRE   SG  FVTLKRKG RDVV+Q HARSAS+GSVG            S  + G                       XXXX +    ER   H    DLEA+ PL      PSP P RR S + S  G   XX RRG                G   S  +++ASLEDAAQRIAVDPD+GHSYFVERSTVCDACPYC+DTCEVAWCNGCDE R  LE+A+G LMLS AE
Sbjct:   38 MSLPSPAELSVI--EIEDAHTPIPLGGFPGGSPTGEVIGTPGRPHRERNHSGGGFVTLKRKGVRDVVRQAHARSASAGSVG-------GKPAGSCRTCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCGYDERDHVH----DLEANEPL----GPPSPMPFRRPSGSGSVGGRGSXXXRRGS---------------GTPGSAAAAVASLEDAAQRIAVDPDSGHSYFVERSTVCDACPYCEDTCEVAWCNGCDETRMHLEEAYGKLMLSAAE 279
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHZ6_ECTSI3.770e-6354.74Cytochrome b5 heme-binding domain-containing prote... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig1030contigS-firma_F_contig1030:5282..6599 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig1030.446.1mRNA_S-firma_F_contig1030.446.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig1030 3340..6608 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig1030.446.1 ID=prot_S-firma_F_contig1030.446.1|Name=mRNA_S-firma_F_contig1030.446.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=402bp
MSLPSPAELSNIDIEIESAHTPVPLGGFSGGSPTGEVNPSPGRKHREHVR
SGRCFVTLKRKGARDVVKQTHARSASSGSVGTAGGGGDGGGRGSGSSVGG
NTPKLELNGSDFFSDGGGGIGIGGGSAHGNGSERGGFHRPEDDLEADGPL
CTAINTPSPAPLRRASRTASGSGSSSGRRGSGSGSGSISGSRGGGGGFRV
STGSSLASLEDAAQRIAVDPDTGHSYFVERSTVCDACPYCDDTCEVAWCN
GCDERRAQLEDAHGPLMLSKAEEEAAGAGGGKVAGGGNGSSLPRCCLAVT
RESRATRCARCGAESSRAPAGSCPRAPSTTSPAPSRTTRAGRDPCSGTPA
AGTARRTSTSIPGWRRSSGGSTASGAWSRAGGSWARTATARRGRCEPGAT
A*
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