mRNA_S-firma_F_contig1030.446.1 (mRNA) Sphaerotrichia firma ET2_F female
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Overview
Homology
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Match: D7FHZ6_ECTSI (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ6_ECTSI) HSP 1 Score: 224 bits (570), Expect = 9.380e-61 Identity = 153/277 (55.23%), Postives = 168/277 (60.65%), Query Frame = 1
Query: 1 DRRMSLPSPAELSNIDIEIESAHTPVPLGGFSGGSPTGEVNPSPGRKHREHVRSGRCFVTLKRKGARDVVKQTHARSASSGSVGTAXXXXXXXXXXSGSSVGGNTPKLELNGSDFFSDGGGGIGIXXXXAHGNGSERGGFHRPEDDLEADGPLCTAINTPSPAPLRRASRTAS--GXXXXXGRRGXXXXXXXXXXXXXXXXGFRVSTGSSLASLEDAAQRIAVDPDTGHSYFVERSTVCDACPYCDDTCEVAWCNGCDERRAQLEDAHGPLMLSKAE 825
DRRMSLPSPAELS I EIE AHTP+PLGGF GGSPTGEV +PGR HRE SG FVTLKRKG RDVV+Q HARSAS+GSVG S + G XXXX + ER H DLEA+ PL PSP P RR S + S G XX RRG G S +++ASLEDAAQRIAVDPD+GHSYFVERSTVCDACPYC+DTCEVAWCNGCDE R LE+A+G LMLS AE
Sbjct: 35 DRRMSLPSPAELSVI--EIEDAHTPIPLGGFPGGSPTGEVIGTPGRPHRERNHSGGGFVTLKRKGVRDVVRQAHARSASAGSVG-------GKPAGSCRTCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCGYDERDHVH----DLEANEPL----GPPSPMPFRRPSGSGSVGGRGSXXXRRGS---------------GTPGSAAAAVASLEDAAQRIAVDPDSGHSYFVERSTVCDACPYCEDTCEVAWCNGCDETRMHLEEAYGKLMLSAAE 279
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Match: A0A2D4CIY3_PYTIN (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIY3_PYTIN) HSP 1 Score: 89.4 bits (220), Expect = 8.650e-16 Identity = 40/80 (50.00%), Postives = 51/80 (63.75%), Query Frame = 3
Query: 930 LCEVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGGRDCEEDFHFHSRVAKKQWRQYRIGSLVACRGELGED 1169
LCEVR+ +CW+V+ +VYDVTG LA HP G RS+LR AGG+DC +D FHS+ A+K + IG L C G D
Sbjct: 185 LCEVRQHTTADSCWLVANNAVYDVTGVLASHPAGPRSILRKAGGKDCTQDMKFHSKTARKLLEKCFIGKLEPCGETNGAD 264
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Match: A0A7S2Q1K2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q1K2_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.850e-14 Identity = 31/78 (39.74%), Postives = 54/78 (69.23%), Query Frame = 3
Query: 918 SSYTLCEVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGGR-DCEEDFHFHSRVAKKQWRQYRIGSLVAC 1148
++YT+C+++R + W++ ++YD T + HPGG ++LR +GG DC ED FHS A+++WR++++G+LVAC
Sbjct: 96 NTYTMCQLKRHNHAESAWILVGDTIYDATPYIRSHPGGTETILRKSGGAADCTEDMRFHSGRAQREWRKFKVGTLVAC 173
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Match: A0A836GYK1_9TRYP (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Porcisia hertigi TaxID=2761500 RepID=A0A836GYK1_9TRYP) HSP 1 Score: 79.0 bits (193), Expect = 3.480e-13 Identity = 33/70 (47.14%), Postives = 47/70 (67.14%), Query Frame = 3
Query: 936 EVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGG-RDCEEDFHFHSRVAKKQWRQYRIGSLV 1142
E+R + W+VS GSVYDVTG L HPGG+ ++LR GG +DCE D+ FHSR A+++W ++G +
Sbjct: 22 EIRIHNTRRSLWIVSGGSVYDVTGMLGSHPGGEAAILRRGGGSKDCEVDYKFHSRYARREWDSRKVGEIT 91
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Match: A0A836KGQ1_9TRYP (Cytochrome b5 heme-binding domain-containing protein n=5 Tax=Leishmania TaxID=5658 RepID=A0A836KGQ1_9TRYP) HSP 1 Score: 76.6 bits (187), Expect = 2.210e-12 Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 3
Query: 936 EVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGG-RDCEEDFHFHSRVAKKQWRQYRIGSLVA 1145
E+R + W+VS SVYDVTG L HPGG+ ++LR GG ++CE D+ HSR A++QW ++G + A
Sbjct: 22 EIRMHNTRRSLWIVSGNSVYDVTGILGSHPGGEAAILRRGGGSKNCEADYRLHSRYARRQWDDRKVGEITA 92
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Match: E9ADU2_LEIMA (Cytochrome b5 heme-binding domain-containing protein n=8 Tax=Leishmania TaxID=5658 RepID=E9ADU2_LEIMA) HSP 1 Score: 75.9 bits (185), Expect = 4.090e-12 Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 3
Query: 936 EVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGG-RDCEEDFHFHSRVAKKQWRQYRIGSLV 1142
E+R + W+VS SVYDVTG L HPGG+ ++LR GG ++CE D+ FHSR A+++W ++G +
Sbjct: 22 EIRMHNTRRSLWIVSGNSVYDVTGVLGSHPGGEAAILRRGGGSKNCEADYTFHSRYARREWDNCKVGEIT 91
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Match: A4HH96_LEIBR (Cytochrome b5 heme-binding domain-containing protein n=4 Tax=Viannia TaxID=37616 RepID=A4HH96_LEIBR) HSP 1 Score: 75.9 bits (185), Expect = 4.090e-12 Identity = 31/71 (43.66%), Postives = 47/71 (66.20%), Query Frame = 3
Query: 936 EVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGG-RDCEEDFHFHSRVAKKQWRQYRIGSLVA 1145
E+R + W+VS SVYDVTG L HPGG+ ++LR GG ++CE D+ FHSR A+++W ++G + +
Sbjct: 22 EIRMHNTRRSLWIVSGNSVYDVTGLLGSHPGGEAAILRRGGGSKNCEADYTFHSRYARREWDNRKVGEITS 92
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Match: A0A0N1IMH0_LEPSE (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Leptomonas seymouri TaxID=5684 RepID=A0A0N1IMH0_LEPSE) HSP 1 Score: 73.2 bits (178), Expect = 3.870e-11 Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 3
Query: 936 EVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGG-RDCEEDFHFHSRVAKKQWRQYRIGSLV 1142
EVR + W+VS SVYDVT L HPGG+ ++LR GG +DCE D+ FHSR A+++W ++G +
Sbjct: 25 EVRVHNSRRSLWIVSGNSVYDVTAVLTSHPGGEAAMLRRGGGAKDCEADYTFHSRYARREWDARKVGEVT 94
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Match: D0EP49_AGATN (Nitrate reductase n=1 Tax=Agarophyton tenuistipitatum TaxID=2510778 RepID=D0EP49_AGATN) HSP 1 Score: 70.9 bits (172), Expect = 1.220e-8 Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 3
Query: 921 SYTLCEVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGGRDCEEDFHFHSRVAKKQWRQYRIGSLVA 1145
S+T+ +V ++ + W+V +G VYD T L DHPGGK S+L NAG EE HS AKK Y IG LVA
Sbjct: 533 SFTMKDVEKQNSEDSAWIVVEGKVYDATPYLEDHPGGKASILMNAGQDATEEFLAIHSDKAKKMLEDYYIGELVA 607
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Match: A0A0D1CW43_USTMA (Putative cytochrome b5 n=8 Tax=Ustilaginales TaxID=5267 RepID=A0A0D1CW43_USTMA) HSP 1 Score: 62.8 bits (151), Expect = 1.700e-8 Identity = 31/71 (43.66%), Postives = 45/71 (63.38%), Query Frame = 3
Query: 930 LCEVRRRKLTGACWVVSQGSVYDVTGALADHPGGKRSVLRNAGGRDCEEDFHFHS-RVAKKQWRQYRIGSL 1139
L E++ K + WVV +G VYDVTG L DHPGGK+ +L+N G E + +HS ++ +K ++Y IG L
Sbjct: 7 LNELKNHKSEDSAWVVVEGKVYDVTGFLDDHPGGKKILLKNCGKDATEAFWTYHSEKILEKVAQEYHIGEL 77 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig1030.446.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Sphaerotrichia firma female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-firma_F_contig1030.446.1 >prot_S-firma_F_contig1030.446.1 ID=prot_S-firma_F_contig1030.446.1|Name=mRNA_S-firma_F_contig1030.446.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=402bp MSLPSPAELSNIDIEIESAHTPVPLGGFSGGSPTGEVNPSPGRKHREHVRback to top mRNA from alignment at S-firma_F_contig1030:3340..6608- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-firma_F_contig1030.446.1 ID=mRNA_S-firma_F_contig1030.446.1|Name=mRNA_S-firma_F_contig1030.446.1|organism=Sphaerotrichia firma ET2_F female|type=mRNA|length=3269bp|location=Sequence derived from alignment at S-firma_F_contig1030:3340..6608- (Sphaerotrichia firma ET2_F female)back to top Coding sequence (CDS) from alignment at S-firma_F_contig1030:3340..6608- >mRNA_S-firma_F_contig1030.446.1 ID=mRNA_S-firma_F_contig1030.446.1|Name=mRNA_S-firma_F_contig1030.446.1|organism=Sphaerotrichia firma ET2_F female|type=CDS|length=2412bp|location=Sequence derived from alignment at S-firma_F_contig1030:3340..6608- (Sphaerotrichia firma ET2_F female)back to top |