prot_S-firma_F_contig10086.161.1 (polypeptide) Sphaerotrichia firma ET2_F female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_F_contig10086.161.1
Unique Nameprot_S-firma_F_contig10086.161.1
Typepolypeptide
OrganismSphaerotrichia firma ET2_F female (Sphaerotrichia firma ET2_F female)
Sequence length445
Homology
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BLAST of mRNA_S-firma_F_contig10086.161.1 vs. uniprot
Match: A0A5A8CYL0_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CYL0_CAFRO)

HSP 1 Score: 89.4 bits (220), Expect = 2.110e-16
Identity = 57/172 (33.14%), Postives = 93/172 (54.07%), Query Frame = 0 
Query:  243 LNMKPMPGMPGSGINVASPASLPDTLALGTTYASDHSFNNDVNALLGEVDKSSGEARDIRTRLVEKENFMAALNTRKGIIDSDITADKDTLNSVMAHIKALSARVERLKNAAVQRTLAAQEHQYSQAAQSLTGEAENLKAVQKALKDKIKTLEKTNKPLLDEERAGMRASLE 414
            L M+P+PG     I VA+P S+   L     Y + H++  D+ +L+ E+D S   AR +R +LV+K+NF+ ++  R+ ++  D+   K  L ++ AHI+A  ARVERLK    Q  L  Q+H    A + +     +++AV  AL  +++  +   K  L  E   MR SL+
Sbjct:   54 LVMEPLPGQGNQPIEVAAPTSVGGDLPDAARYGNLHAYTEDLKSLVKEMDDSEQNARSLRVKLVDKDNFLESMLKRERLLKIDLDQHKTQLAAMNAHIQATEARVERLKKERQQAELDYQKHSMDSATRHIATTINSVEAVSSALDSRLERTDARVKDALMRETEAMRRSLQ 225
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BLAST of mRNA_S-firma_F_contig10086.161.1 vs. uniprot
Match: A0A7S1CXG8_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CXG8_CYCTE)

HSP 1 Score: 69.3 bits (168), Expect = 1.410e-10
Identity = 46/118 (38.98%), Postives = 71/118 (60.17%), Query Frame = 0 
Query:  297 EARDIRTRLVEKENFMAALNTRKGIIDSDITADKDTLNSVMAHIKALSARVERLKNAAVQRTLAAQEHQYSQAAQSLTGEAENLKAVQKALKDKIKTLEKTNKPLLDEERAGMRASLE 414
            +AR +R  +VEK+NF+  L  R+ ++  D+TA K TL ++ AHI+A+ AR+ RLK       +AAQ+ Q   A+  L  E  N++AV  AL+++I TL    K  L+ E   MR S++
Sbjct:    2 KARKLRMMIVEKDNFLEGLQKREKLLRVDMTAHKQTLGALGAHIQAVEARIGRLKEERQLADIAAQKLQMEAASGKLDVERTNIRAVASALENRIDTLGAGVKNNLETEIESMRRSVQ 119
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_F_contig10086.161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A5A8CYL0_CAFRO2.110e-1633.14Hypothetical protein n=1 Tax=Cafeteria roenbergens... [more]
A0A7S1CXG8_CYCTE1.410e-1038.98Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 333..353
NoneNo IPR availableCOILSCoilCoilcoord: 370..397
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..444
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.849

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_F_contig10086contigS-firma_F_contig10086:119..1652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma female2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma female vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma ET2_F female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_F_contig10086.161.1mRNA_S-firma_F_contig10086.161.1Sphaerotrichia firma ET2_F femalemRNAS-firma_F_contig10086 117..2587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_F_contig10086.161.1 ID=prot_S-firma_F_contig10086.161.1|Name=mRNA_S-firma_F_contig10086.161.1|organism=Sphaerotrichia firma ET2_F female|type=polypeptide|length=445bp
MRLFVAIAALVAVVGAQTLVPQRMDTFSAPARFPSIAEGSGSGSAAIGSA
SGSGSALGSGSASGSGGSGSGSDVGSGSSPSVGSPIPPFKGNKDVVDNYV
TALQRDLNQDLADLHEKSLQIVRDATAALERVTAEKAEGGSGSGSLAGSA
SGSGSASGSASGSTSGSGSGSTSGSGSASGSASGSPSFIQLASTHLRGSG
SGSGSASASASGSASGSGSASGSASGSGSASGSGSDSPGPGMLNMKPMPG
MPGSGINVASPASLPDTLALGTTYASDHSFNNDVNALLGEVDKSSGEARD
IRTRLVEKENFMAALNTRKGIIDSDITADKDTLNSVMAHIKALSARVERL
KNAAVQRTLAAQEHQYSQAAQSLTGEAENLKAVQKALKDKIKTLEKTNKP
LLDEERAGMRASLELGSGSGAAPGSAARFAELDRSHRLYRKHRN*
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